mRNA_P-littoralis_Contig675.13.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig675.13.2
Unique NamemRNA_P-littoralis_Contig675.13.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig675.13.2 vs. uniprot
Match: A0A6H5J9H9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9H9_9PHAE)

HSP 1 Score: 879 bits (2270), Expect = 1.780e-301
Identity = 432/483 (89.44%), Postives = 446/483 (92.34%), Query Frame = 1 
Query:   91 MPSKRVWVKQGLDSHRSAQVLLVPLGSIPPDVYAKYCEILRRFSTIPMQNLTAPGDWNRQNGALKHFNWSEGCFNFHFIDQDTTDGGPSEWEDYQAYRRVLGVIGVVHFPSCEGGHADFKELEKQFNTVVAGYKHARATRMFAFGHSFEQGDYPDILDPQRDIVFPPEQEFEDGGSTTELHMAVSLYDVAVSIIKNLAADIKTW-SSPSPSSAAGKAGAVLRGSNESLPPLTSWYEREEVLSDSKISKRRAGRLHKWIGDTCLLLGSPK--------------DALEHYSQSMSDTKASSDPLWHAGCLEGYAACLSAMSDADHPTVHGDQALALLRDMAKDKELEKAGQEGSSTWTVLAEAVVSEKCQEALAVLRGCPPLGSLEVELCFKTARFHACAQPNPRWDEALAALLRALTVPDMPMQVQLERSIEAAVLCEGMGLKRKAALFAHLSAMLCSDFETWNTAHLLARMAGEGYGALLPP 1494
            MP  RVWVKQGLDSHRS QVLLVPLG+IPPDVYAKYCEILRRFSTIPMQNLTAPGDWNRQNGALKHFNWSEGCFNFHFIDQDTTDGG S+WEDYQAYRRVLG IGVVHFPSCEGGHADFKELEKQFN VVAGYKH  ATRMFAFGHSFEQGDYPDILDPQRDIVFPPEQEFE GGSTTELHMAVSLYDVAVSIIKNLAADIKTW SS SP SAAG+A AVLRG+N++ PPLTSWYEREEVLSDSK +KRR GRLHKWIGDTCLLLGSPK              DALEHYSQSMS+TKAS+DPLWHAGCLEGYAACLSAMSDADHPTVHGDQALALLRDMAKDKELE+AGQEGSSTWTVLAEAVVSEKC+EALAV    PPLGSLEVELCFKTARFHACAQP PRW+EALAALLRAL+VPDMPM VQLERSIEAAV+CEGMGLKRKAALFAHLSAMLCSD ETWNTAHLLARMAGEGYGALLPP
Sbjct:    1 MPPTRVWVKQGLDSHRSVQVLLVPLGNIPPDVYAKYCEILRRFSTIPMQNLTAPGDWNRQNGALKHFNWSEGCFNFHFIDQDTTDGGLSDWEDYQAYRRVLGAIGVVHFPSCEGGHADFKELEKQFNQVVAGYKHVHATRMFAFGHSFEQGDYPDILDPQRDIVFPPEQEFEGGGSTTELHMAVSLYDVAVSIIKNLAADIKTWRSSASPPSAAGRAVAVLRGNNDAAPPLTSWYEREEVLSDSKNAKRRVGRLHKWIGDTCLLLGSPKCLSVCVLSLLLRPKDALEHYSQSMSETKASTDPLWHAGCLEGYAACLSAMSDADHPTVHGDQALALLRDMAKDKELERAGQEGSSTWTVLAEAVVSEKCEEALAVFSRHPPLGSLEVELCFKTARFHACAQPTPRWEEALAALLRALSVPDMPMHVQLERSIEAAVICEGMGLKRKAALFAHLSAMLCSDSETWNTAHLLARMAGEGYGALLPP 483
[Close]
BLAST of mRNA_P-littoralis_Contig675.13.2 vs. uniprot
Match: D8LGF8_ECTSI (OSJNBa0029H02.30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGF8_ECTSI)

HSP 1 Score: 738 bits (1904), Expect = 1.880e-264
Identity = 361/405 (89.14%), Postives = 376/405 (92.84%), Query Frame = 1 
Query:   91 MPSKRVWVKQGLDSHRSAQVLLVPLGSIPPDVYAKYCEILRRFSTIPMQNLTAPGDWNRQNGALKHFNWSEGCFNFHFIDQDTTDGGPSEWEDYQAYRRVLGVIGVVHFPSCEGGHADFKELEKQFNTVVAGYKHARATRMFAFGHSFEQGDYPDILDPQRDIVFPPEQEFEDGGSTTELHMAVSLYDVAVSIIKNLAADIKTW-SSPSPSSAAGKAGAVLRGSNESLPPLTSWYEREEVLSDSKISKRRAGRLHKWIGDTCLLLGSPKDALEHYSQSMSDTKASSDPLWHAGCLEGYAACLSAMSDADHPTVHGDQALALLRDMAKDKELEKAGQEGSSTWTVLAEAVVSEKCQEALAVLRGCPPLGSLEVELCFKTARFHACAQPNPR--WDEALAALLRALT 1296
            MP  RVWVKQGLDSHRSAQVLLVPLG+IPPDVYAKYCEILRRFSTIPMQNLTAPGDWNRQN ALKHFNWSEGCFNFHFIDQDTTDGG S+WEDYQAYRRVLG IGVVHFPSCEGG ADFKELEKQFN VVAGYKH  ATRMFAFGHSFEQGDYPDILDPQRDIVFPPEQEFE GGSTTELHMAVSLYDVAVSIIKNLAADIKTW SS SP SAAG+A AVLRG+N++ PPLTSWYEREEVLSDSK +KRR GRLHKWIGDTCLLLGSPKDALEHYSQSMS+TKAS+DPLWHAGCLEGYAACLSAMSDADHPTVHGDQALALL+DMAKDKELE+AGQEGSSTWTVLAEAVVSEKC+EALAV    PPLGSLEVELCFKTARFHACAQP PR   D A +AL R ++
Sbjct:    1 MPPTRVWVKQGLDSHRSAQVLLVPLGNIPPDVYAKYCEILRRFSTIPMQNLTAPGDWNRQNSALKHFNWSEGCFNFHFIDQDTTDGGLSDWEDYQAYRRVLGAIGVVHFPSCEGGRADFKELEKQFNQVVAGYKHVHATRMFAFGHSFEQGDYPDILDPQRDIVFPPEQEFEGGGSTTELHMAVSLYDVAVSIIKNLAADIKTWRSSASPPSAAGRAVAVLRGNNDAAPPLTSWYEREEVLSDSKNAKRRVGRLHKWIGDTCLLLGSPKDALEHYSQSMSETKASTDPLWHAGCLEGYAACLSAMSDADHPTVHGDQALALLKDMAKDKELERAGQEGSSTWTVLAEAVVSEKCEEALAVFSRHPPLGSLEVELCFKTARFHACAQPTPRVSGDAASSALRRRVS 405
[Close]
BLAST of mRNA_P-littoralis_Contig675.13.2 vs. uniprot
Match: A0A835ZHG4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHG4_9STRA)

HSP 1 Score: 275 bits (704), Expect = 4.490e-84
Identity = 148/362 (40.88%), Postives = 200/362 (55.25%), Query Frame = 1 
Query:  106 VWVKQGLDSHRSAQVLLVPLGSIPPDVYAKYCEILRRFSTIPMQNLTAPGDWNRQNGALKHFNWSEGCFNFHFIDQDTTDGGPSEWEDYQAYRRVLGVIGVVHFPSCEGGH-----ADFKELEKQFNTVVAGYKHARATRMFAFGHSFEQGDYPDILDPQRDIVFPPEQEFEDGGSTTELHMAVSLYDVAVSIIKNLAADIKTWSSPSPSSAAGKAGAVLR-------------GSNESLPPLTSWYEREE----------------------------VLSDSKISKRRAGRLHKWIGDTCLLLGSPKDALEHYSQSMSDTKASSDPLWHAGCLEGYAACLSAMSDADHPTVHGDQALALL 1053
            VWVKQ L SH   QVLLVPLG IP DVY +YC + +R S +PMQ+LTAPGDW RQN   +HF+W+EG F+FHF++  TTDGG SEW DYQA+RRV   +G+VH PSC  G      AD   L+ +    VA Y HA   R+F F HSFE G  P   D  RDI+ PPE E E G       +A  L+++AV++I  +   ++ +++      AGK    +              G + +LPPL S  + ++                              +D   ++RR GRL KW+GD  LL G+PKDA+E Y  + ++  A +DPLWHAG LEG+AA L A++D + PT    +   L+
Sbjct:    4 VWVKQTLASHSKVQVLLVPLGGIPKDVYDRYCSLFKRLSAVPMQDLTAPGDWTRQNCPFRHFSWTEGAFHFHFVEDGTTDGGLSEWGDYQAHRRVYVALGIVHEPSCRRGDGDKIGADLSLLQAELALAVAPYPHATLQRIFVFEHSFEAGSIPGY-DANRDIILPPEPEGEGGAELLRRFLAEPLHNIAVALITQIEGWVRAYAAALSGGVAGKLSQYMASARGGGXXXXXXAGGDGALPPLRSPLDTDDDNPLANMGASSASLMSAASAVSLTGGGGKAADRARARRRWGRLRKWLGDLALLAGTPKDAVELYDAAAAEL-AKADPLWHAGALEGFAAALVALADDETPTAVPPEIFKLI 363
[Close]
BLAST of mRNA_P-littoralis_Contig675.13.2 vs. uniprot
Match: A0A4D9D6X0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6X0_9STRA)

HSP 1 Score: 173 bits (439), Expect = 1.300e-42
Identity = 110/355 (30.99%), Postives = 167/355 (47.04%), Query Frame = 1 
Query:  130 SHRSAQVLLVPLGSIPPDVYAKYCEILRR-FSTIPMQNLTAPGDWNRQNGALKHFNWSEGCFNFHFIDQ-DTTDGGPSEWEDYQAYRRVLGVIGVVHFPSCEGGHADFKELEKQFNTVVAGYKHARATRMFAFGHSFEQGDYPDILDPQRD------------IVFPPEQEFEDGG-STTELHMAVSLYDVAVSIIKNLAADIKTWSSPSPSSAAGKAGAVLR-----------------------------GSNESLPPLTS-WYEREEVLSDSKISKRRA-------------------GRLHKWIGDTCLLLGSPKDALEHYSQSMSDTKASSDPLWHAGCLEGYAACLSAM 1002
            +HR  +V +VPLG +P   +  Y  +LRR F  +PM NL+ PG W +++   KHF+W +G     ++D+   +    SEW+D++A+RR   VIG+VH PSC  G      +E +F+  +  + HA A ++F FGHSF  G+      PQ++            ++FPPE + ++ G S  E HM V L D+AV ++  L A++          A  KAG                                 G    L      W  +    +D     R A                   GR  KW+GD CLL G+P+DALE Y+Q++++ KA+ +PLW AG LEG+ A +  +
Sbjct:   16 AHRQLRVAVVPLGGVPGARFRVYLSLLRRSFHELPMANLSKPGSWKKESSPFKHFSWFDGNLLLQYLDRAPPSTSASSEWQDFEAFRRTWAVIGIVHLPSCAPGTVG--GVEAEFHARLKEFPHALAKKVFCFGHSFGAGEGGMDGAPQQESLETLYRHKEELVIFPPEGDPKERGVSMVEAHMGVMLSDLAVVVLSRLEAEV----------AGAKAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGKGTGLAKRGGQWLAQLRSPADGGGGPRLARGGQAGGQHVELGGGGGDRGRWGKWVGDLCLLAGTPQDALEAYAQALAECKAAGEPLWQAGALEGWIASVGVL 358
[Close]
BLAST of mRNA_P-littoralis_Contig675.13.2 vs. uniprot
Match: A0A6A3NFJ8_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3NFJ8_9STRA)

HSP 1 Score: 132 bits (333), Expect = 2.890e-29
Identity = 132/485 (27.22%), Postives = 207/485 (42.68%), Query Frame = 1 
Query:  136 RSAQVL--LVPLGSIPPDVYAKYCEILRRFSTIPMQNLTAPGDWNRQNGALKHFNWSEG-CFNFHFIDQ----DTTDGGPSEWEDYQAYRRVLGVIGVVHFPSCEGGHADFKELEKQFNTVVAGYKHARATRMFAFGHSFEQGDYPDILDPQRDIVFPPEQEFEDGG-STTELHMAVSLYDVAVSIIKNLAADIKTWSSPSPSS----------------------------------------AAGKAGAVLRGSNESLPPLTSWYEREEVLSD--SKISKRRAGRLHKWIGDTCLLLGSPKDALEHYSQSMSDTK--------ASSDPLWHAGCLEGYAACLSAMSDADHPTVHGDQALALLRDMAKDKELEKAGQEGSSTWTVLAEAVVSEKCQEALAVLRGCPPLGSLEVELCFKTARFHACAQPNPRWDEALAALLRALTV-PDMPMQVQLERSIEAAVLCEGMGLKRKAALFAHLSAML 1413
            R AQ L  LVP+G IPPDV+A Y  +L+R S +P+++LT PG +  +    +  +W+ G    F F+      D  DG     ED QA RRV+GV+GV H PS    H   +   +QF   V  +      ++FAF H+FE     +       ++FP   E +  G ST  LH+ V +  +AV+ +  L + I++ ++ + +S                                        AA  A    R +  SL  + S         D  ++  KR+  R  K +GD  +L+    DAL+HY+ ++   +        A  D LW A  LEG+  CL++ +     T   ++A   +   AK   +E          ++L E +       A+A LR     G  +V     T R          WD     L R L + P++  Q Q+E  I+ + + E +G +R+ ALF H +A L
Sbjct:   12 RPAQFLVYLVPVGDIPPDVFASYARLLQRHSDLPLRSLTRPGGYAAELSPFRSLDWAGGGVLRFRFVSAAERVDACDG-----EDVQASRRVVGVLGVCHSPSLTL-HGGLRAAYEQFEASVRRFPGLLLHKLFAFEHAFEDATAAECEGLADLVMFPVHHELQGTGESTVSLHLQVVMDTLAVNALMALESAIRSATASAAASTPRVGDLASVLLDVNVEPQQQQTQQSASSPLVLSRDVKADAAFTASPTSRATGPSLTSIPSPLAAGVAALDPRNRRRKRQLARREKLLGDYSVLVSCISDALDHYTVAVEMLREEERRSGGAPGDALWLAAALEGFVFCLNSEAQDKFSTELVEKASEAVALYAKAGTVELE--------SLLIENLGWYYAAVAMATLRRASTSGEAKVLESLWTKRL--------LWD----VLERGLMLFPELQPQRQVEFLIQTSRMLETVGHRRRVALFLHEAASL 470
[Close]
BLAST of mRNA_P-littoralis_Contig675.13.2 vs. uniprot
Match: A0A6A3P5S4_9STRA (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=A0A6A3P5S4_9STRA)

HSP 1 Score: 132 bits (333), Expect = 7.490e-29
Identity = 132/485 (27.22%), Postives = 207/485 (42.68%), Query Frame = 1 
Query:  136 RSAQVL--LVPLGSIPPDVYAKYCEILRRFSTIPMQNLTAPGDWNRQNGALKHFNWSEG-CFNFHFIDQ----DTTDGGPSEWEDYQAYRRVLGVIGVVHFPSCEGGHADFKELEKQFNTVVAGYKHARATRMFAFGHSFEQGDYPDILDPQRDIVFPPEQEFEDGG-STTELHMAVSLYDVAVSIIKNLAADIKTWSSPSPSS----------------------------------------AAGKAGAVLRGSNESLPPLTSWYEREEVLSD--SKISKRRAGRLHKWIGDTCLLLGSPKDALEHYSQSMSDTK--------ASSDPLWHAGCLEGYAACLSAMSDADHPTVHGDQALALLRDMAKDKELEKAGQEGSSTWTVLAEAVVSEKCQEALAVLRGCPPLGSLEVELCFKTARFHACAQPNPRWDEALAALLRALTV-PDMPMQVQLERSIEAAVLCEGMGLKRKAALFAHLSAML 1413
            R AQ L  LVP+G IPPDV+A Y  +L+R S +P+++LT PG +  +    +  +W+ G    F F+      D  DG     ED QA RRV+GV+GV H PS    H   +   +QF   V  +      ++FAF H+FE     +       ++FP   E +  G ST  LH+ V +  +AV+ +  L + I++ ++ + +S                                        AA  A    R +  SL  + S         D  ++  KR+  R  K +GD  +L+    DAL+HY+ ++   +        A  D LW A  LEG+  CL++ +     T   ++A   +   AK   +E          ++L E +       A+A LR     G  +V     T R          WD     L R L + P++  Q Q+E  I+ + + E +G +R+ ALF H +A L
Sbjct:   12 RPAQFLVYLVPVGDIPPDVFASYARLLQRHSDLPLRSLTRPGGYAAELSPFRSLDWAGGGVLRFRFVSAAERVDACDG-----EDVQASRRVVGVLGVCHSPSLTL-HGGLRAAYEQFEASVRRFPGLLLHKLFAFEHAFEDATAAECEGLADLVMFPVHHELQGTGESTVSLHLQVVMDTLAVNALMALESAIRSATASAAASTPRVGDLASVLLDVNVEPQQQQTQQSASSPLVLSRDVKADAAFTASPTSRATGPSLTSIPSPLAAGVAALDPRNRRRKRQLARREKLLGDYSVLVSCISDALDHYTVAVEMLREEERRSGGAPGDALWLAAALEGFVFCLNSEAQDKFSTELVEKASEAVALYAKAGTVELE--------SLLIENLGWYYAAVAMATLRRASTSGEAKVLESLWTKRL--------LWD----VLERGLMLFPELQPQRQVEFLIQTSRMLETVGHRRRVALFLHEAASL 470
[Close]
BLAST of mRNA_P-littoralis_Contig675.13.2 vs. uniprot
Match: A0A2H9ZV55_9ASPA (Uncharacterized protein n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2H9ZV55_9ASPA)

HSP 1 Score: 132 bits (332), Expect = 9.010e-29
Identity = 93/293 (31.74%), Postives = 142/293 (48.46%), Query Frame = 1 
Query:  145 QVLLVPLG-SIPPDVYAKYCEILRRFSTIPMQNLTAPGDWNRQNGALKHFNWSEGCFNFHFIDQDTTDGGPSEWEDYQAYRRVLGVIGVVHFPSCEGGHADFKELEKQFNTVVAGYKHARATRMFAFGHSFEQGDYPDILDPQRDIVFPPEQEFEDGGSTTELHMAVSLYDVAVSIIKNLAADIKTWSSPSPSSAAGKAGAVLRGSNESLPPLTSWYEREEVLSDSKISKRRAGRLHKWIGDTCLLLGSPKDALEHYSQSMSDTKASSDPLWHAGCLEGYAACL--SAMSDAD 1014
            +V ++P+G +IPP     Y  +L R++ I + ++++      Q     H  W  G   F ++        PS WED+QA+R++L VIG+ H P+      D   + +QFN V  GY  A A R+FAF  S  Q +     +    I+FPP  +      + ELHM   + D+A +++     + + W   + S     AG +L+   +S   L+S    EE++   K  KRR  R  K IGD CLL GSP D   H++ ++   + + D  WHAG LEG    L    M D D
Sbjct:   14 RVAVLPVGGTIPPQRLRHYVSMLARYTRIELSSISS-FYLEHQKSPFTHQPWDSGGLRFKYM---VGGAPPSPWEDFQAHRKILSVIGLCHCPASP----DLDSVIEQFNAVSKGYDSALAKRLFAFSPSDAQLEEGQAKEGNI-ILFPPSDQ-----QSQELHMVTMIQDLAATLLM----EFEKWVLRAES-----AGTILKTPLDSQSSLSS----EEMI---KAKKRRLARAQKTIGDYCLLAGSPADGNAHFTTAIELARLTGDVFWHAGALEGSVCALLVDRMEDRD 276
[Close]
BLAST of mRNA_P-littoralis_Contig675.13.2 vs. uniprot
Match: A0A835UJZ4_VANPL (Uncharacterized protein n=2 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835UJZ4_VANPL)

HSP 1 Score: 129 bits (325), Expect = 5.360e-28
Identity = 95/302 (31.46%), Postives = 145/302 (48.01%), Query Frame = 1 
Query:  145 QVLLVPLGS-IPPDVYAKYCEILRRFSTIPMQNLTAPGDWNRQNGALKHFNWSEGCFNFHFIDQDTTDGGPSEWEDYQAYRRVLGVIGVVHFPSCEGGHADFKELEKQFNTVVAGYKHARATRMFAFGHS---FEQGDYPDILDPQRDIVFPPEQEFEDGGSTTELHMAVSLYDVAVSIIKNLAADIKTWSSPSPSSAAGKAGAVLRGSNESLPPLTSWYEREEVLSDSKISKRRAGRLHKWIGDTCLLLGSPKDALEHYSQSMSDTKASSDPLWHAGCLEGYAACLSAMSDADHPTVHGDQ 1038
            ++ ++P+G  IP     +Y  +L R + I + ++++     +QN  + H  W  G   F ++      G PS WED+QA+R++L VIG+ H P+      D   +  QF  V  GY  A A R+FAF  S    E+G   +       I+FPP  +      T ELHM   + D+A +++     + + W   + S+     G +L+   +S   L S    EEV+   K  KRR  R  K IGD CLL GSP DA  H++ ++   + + D  WHAG LEG    L      D  +V  D+
Sbjct:   14 RIAVLPVGGPIPHSRLREYLSMLARHTRIDLSSISSFYS-EQQNSPITHQPWESGSLRFKYM---VGGGPPSPWEDFQAHRKILAVIGLCHCPASP----DLDLVIDQFAIVSKGYTSALAKRLFAFSPSDAQLEEGQEKE----NSIILFPPSDQ-----QTQELHMLTMIQDLAATLLM----EFEQWVLQAEST-----GTILKTPLDSQSSLGS----EEVI---KAKKRRLARAQKTIGDYCLLAGSPVDANAHFATAIELARLTGDVFWHAGALEGSVCALLVDRMYDKDSVLEDE 282
[Close]
BLAST of mRNA_P-littoralis_Contig675.13.2 vs. uniprot
Match: A0A118JZT0_CYNCS (TRAPP II complex, Trs120 n=2 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=A0A118JZT0_CYNCS)

HSP 1 Score: 124 bits (310), Expect = 5.130e-26
Identity = 89/305 (29.18%), Postives = 141/305 (46.23%), Query Frame = 1 
Query:  124 LDSHRSAQVLLVPLGSIPPDVYAKYCEILRRFSTIPMQNLTAPGDWNRQNGALKHFNWSEGCFNFHFIDQDTTDGG--PSEWEDYQAYRRVLGVIGVVHFPSCEGGHADFKELEKQFNTVVAGYKHARATRMFAFGHSFEQGDYPDILDPQRDIVFPPEQEFEDGGSTTELHMAVSLYDVAVSIIKNLAADIKTWSSPSPSSAAGKAGAVLRGSNESLPPLTSWYEREEVL-------SDSKISKRRAGRLHKWIGDTCLLLGSPKDALEHYSQSMSDTKASSDPLWHAGCLEGYAACLSAMSDA 1011
            +++    ++ ++P+G+I P+++  Y  +L R   + +  +++     R         W+ G   F ++      GG  PS WED+Q+YR++LGVIG+ H PSC     D   +  QF     GY  +   R FAF     Q +  +     + ++FPP  +      T E H+   + D+A S++     + + W   + S      G +L+   +S   L++    EEV           K  KRR  R  K IGD CLL GSP DA  HYS ++   + + D  W+AG LEG   C   MS A
Sbjct:    7 IETSSMIRIAVLPIGTIHPNLFRNYVAMLGRHHKMELSAISSFYS-QRHKSPFSQQPWNSGNLRFKYV-----IGGSPPSPWEDFQSYRKILGVIGICHCPSCP----DLDSVVGQFVAACKGYPSSLVQRCFAFSPGDSQLE-DESKKRNKLVLFPPADQ-----RTQEFHLQTMMQDIAASLLM----EFEKWVLEAES-----GGTLLKTPLDSQASLSA----EEVCVLGVLVKEAIKAKKRRHARAQKTIGDYCLLAGSPIDANAHYSTALELARMTGDYFWYAGALEG-GVCAFLMSKA 281
[Close]
BLAST of mRNA_P-littoralis_Contig675.13.2 vs. uniprot
Match: A0A2K1IP90_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1IP90_PHYPA)

HSP 1 Score: 121 bits (304), Expect = 2.910e-25
Identity = 120/453 (26.49%), Postives = 179/453 (39.51%), Query Frame = 1 
Query:  145 QVLLVPLGSIPPDVYAKYCEILRRFSTIPMQNLTAPGDWNRQNGALKHFNWSEGCFNFHFIDQDTTDGGPSEWEDYQAYRRVLGVIGVVHFPSCEGGHADFKELEKQFNTVVAGYKHARATRMFAFGHSFEQGDYPDILDPQRDIVFPPEQEFEDGGSTTELHMAVSLYDVAVSIIKNLAADIKTWSSPSPSSAAGKAGAVLRGSNESLPPL---TSWYEREEVLSDSKISKRRAGRLHKWIGDTCLLLGSPKDALEHYSQSMSDTKASSDPLWHAGCLEGYAACLSAMSDADHPTVHGDQALALLRDMAKDKELEKAGQEGSSTWTVLAEAVVSEKCQEALAVLRGCPPLGSLEVELCFKTARFHACAQPNPRWDEALAALLRALTVPDMPMQVQLERSIEAAVLCEGMGLKRKAALFAHLSAMLCSDFET-WNTAHLLARMA--GEGYGAL 1485
            +V +V +G +PP  +  Y E+L + + IP+  ++       Q        W  G     F+         S WED+QA+R++LGVIG+ H P       D      QF T+   Y  A+ TR FAF  +  Q D  D    +  ++FP            + HM + + D A S++       ++W              VL      L P+   T    +  + SD    KR+ GR+ K +GD CLL GSP DA  HY  ++   + + D LW AG +EGY                     AL+ D A  K+              L E  V  +  E + + R    L S E+E   K ARF  C +   +    L       +   M    +L  ++EAA +   +G  RKAA +A    +L     + W     L  M+   E Y  L
Sbjct:   14 RVAVVAIGEMPPSQFRDYVEMLVQHAQIPLSTVSTYYT-EHQKSPFSQQLWETGSLLLKFM---VGGASKSPWEDFQAHRKILGVIGLCHLPLTP----DISTAYDQFLTICKAYPSAQVTRCFAFHPTDVQIDSDDEKKKEFLVMFPTMDR-----QKLKSHMQILMQDFAASLLMAF----ESW--------------VLH-----LKPVRLVTPLDSQVSLTSDEVNKKRKLGRVQKTMGDYCLLAGSPLDANSHYYTAIELARLTGDSLWQAGAIEGYVC-------------------ALVLDRAGHKDY-------------LLEQEVQFRYSEVIQLYRRATAL-SFELEATLKLARF-LCRKELAKEVMELVMGAVEWSKGLMDASDRLVVNVEAARIFAAIGYDRKAAFYARQVGLLYQQQHSHWAAVSALQVMSLTAESYKCL 396
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig675.13.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J9H9_9PHAE1.780e-30189.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LGF8_ECTSI1.880e-26489.14OSJNBa0029H02.30 n=1 Tax=Ectocarpus siliculosus Ta... [more]
A0A835ZHG4_9STRA4.490e-8440.88Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9D6X0_9STRA1.300e-4230.99Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A6A3NFJ8_9STRA2.890e-2927.22Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A6A3P5S4_9STRA7.490e-2927.22Uncharacterized protein n=9 Tax=Phytophthora TaxID... [more]
A0A2H9ZV55_9ASPA9.010e-2931.74Uncharacterized protein n=1 Tax=Apostasia shenzhen... [more]
A0A835UJZ4_VANPL5.360e-2831.46Uncharacterized protein n=2 Tax=Vanilla planifolia... [more]
A0A118JZT0_CYNCS5.130e-2629.18TRAPP II complex, Trs120 n=2 Tax=Cynara cardunculu... [more]
A0A2K1IP90_PHYPA2.910e-2526.49Uncharacterized protein n=2 Tax=Physcomitrium pate... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig675contigP-littoralis_Contig675:65129..75562 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LGF8
Preferred nameTRAPPC9
PFAMsTRAPPC9-Trs120
Model size1621
Max annot lvl2759|Eukaryota
KEGG koko:K20306
Hectar predicted targeting categorysignal peptide
GOsGO:0000003,GO:0000212,GO:0000226,GO:0000278,GO:0000280,GO:0000281,GO:0000910,GO:0000911,GO:0000916,GO:0000919,GO:0003674,GO:0005085,GO:0005088,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005769,GO:0005794,GO:0005801,GO:0005802,GO:0005829,GO:0005886,GO:0006355,GO:0006810,GO:0006886,GO:0006888,GO:0006891,GO:0006892,GO:0006893,GO:0006900,GO:0006901,GO:0006903,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007107,GO:0007110,GO:0007111,GO:0007112,GO:0007140,GO:0007275,GO:0007276,GO:0007283,GO:0007399,GO:0007417,GO:0007420,GO:0008104,GO:0008150,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016050,GO:0016192,GO:0016197,GO:0016482,GO:0017016,GO:0017112,GO:0017137,GO:0019219,GO:0019222,GO:0019899,GO:0019953,GO:0021537,GO:0021543,GO:0021987,GO:0022008,GO:0022402,GO:0022412,GO:0022414,GO:0022607,GO:0030008,GO:0030029,GO:0030036,GO:0030154,GO:0030182,GO:0030427,GO:0030865,GO:0030866,GO:0030900,GO:0031032,GO:0031267,GO:0031323,GO:0031326,GO:0031410,GO:0031982,GO:0031984,GO:0032153,GO:0032154,GO:0032155,GO:0032501,GO:0032502,GO:0032504,GO:0032506,GO:0032991,GO:0033036,GO:0033206,GO:0034498,GO:0034613,GO:0035838,GO:0036063,GO:0036213,GO:0042147,GO:0042886,GO:0043087,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044093,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0044703,GO:0044837,GO:0045184,GO:0046907,GO:0048137,GO:0048193,GO:0048194,GO:0048199,GO:0048207,GO:0048208,GO:0048232,GO:0048285,GO:0048513,GO:0048518,GO:0048609,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0051020,GO:0051090,GO:0051091,GO:0051092,GO:0051171,GO:0051179,GO:0051234,GO:0051252,GO:0051286,GO:0051301,GO:0051321,GO:0051336,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051704,GO:0060255,GO:0060322,GO:0061024,GO:0061640,GO:0061796,GO:0061982,GO:0061983,GO:0065003,GO:0065007,GO:0065009,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0080090,GO:0090114,GO:0097708,GO:0098590,GO:0098772,GO:0098791,GO:0098876,GO:0099023,GO:0140013,GO:1902410,GO:1903046,GO:1903047,GO:1903506,GO:1990071,GO:2000112,GO:2001141
Exons9
Evalue3.08e-265
EggNOG OGsKOG1953@1|root,KOG1953@2759|Eukaryota
Ec32 ortholog descriptionTetratricopeptide-like helical domain
Ec32 orthologEc-16_003880.1
Descriptioncell plate assembly
Cds size1617
COG categoryS
BRITEko00000,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig675.13.2prot_P-littoralis_Contig675.13.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig675 65131..75562 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791405.0389593-CDS-P-littoralis_Contig675:65130..653731680791405.0389593-CDS-P-littoralis_Contig675:65130..65373Pylaiella littoralis U1_48CDSP-littoralis_Contig675 65131..65373 -
1680791405.0560088-CDS-P-littoralis_Contig675:66292..664101680791405.0560088-CDS-P-littoralis_Contig675:66292..66410Pylaiella littoralis U1_48CDSP-littoralis_Contig675 66293..66410 -
1680791405.070154-CDS-P-littoralis_Contig675:67389..675161680791405.070154-CDS-P-littoralis_Contig675:67389..67516Pylaiella littoralis U1_48CDSP-littoralis_Contig675 67390..67516 -
1680791405.0803387-CDS-P-littoralis_Contig675:68618..688531680791405.0803387-CDS-P-littoralis_Contig675:68618..68853Pylaiella littoralis U1_48CDSP-littoralis_Contig675 68619..68853 -
1680791405.0916023-CDS-P-littoralis_Contig675:69370..694821680791405.0916023-CDS-P-littoralis_Contig675:69370..69482Pylaiella littoralis U1_48CDSP-littoralis_Contig675 69371..69482 -
1680791405.1079843-CDS-P-littoralis_Contig675:70324..705001680791405.1079843-CDS-P-littoralis_Contig675:70324..70500Pylaiella littoralis U1_48CDSP-littoralis_Contig675 70325..70500 -
1680791405.1260445-CDS-P-littoralis_Contig675:73550..737801680791405.1260445-CDS-P-littoralis_Contig675:73550..73780Pylaiella littoralis U1_48CDSP-littoralis_Contig675 73551..73780 -
1680791405.136338-CDS-P-littoralis_Contig675:74101..742561680791405.136338-CDS-P-littoralis_Contig675:74101..74256Pylaiella littoralis U1_48CDSP-littoralis_Contig675 74102..74256 -
1680791405.147891-CDS-P-littoralis_Contig675:75341..755621680791405.147891-CDS-P-littoralis_Contig675:75341..75562Pylaiella littoralis U1_48CDSP-littoralis_Contig675 75342..75562 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig675.13.2

>prot_P-littoralis_Contig675.13.2 ID=prot_P-littoralis_Contig675.13.2|Name=mRNA_P-littoralis_Contig675.13.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=539bp
EVAACVVCVPCVRCWSVLSSWWLHKHPTATMPSKRVWVKQGLDSHRSAQV
LLVPLGSIPPDVYAKYCEILRRFSTIPMQNLTAPGDWNRQNGALKHFNWS
EGCFNFHFIDQDTTDGGPSEWEDYQAYRRVLGVIGVVHFPSCEGGHADFK
ELEKQFNTVVAGYKHARATRMFAFGHSFEQGDYPDILDPQRDIVFPPEQE
FEDGGSTTELHMAVSLYDVAVSIIKNLAADIKTWSSPSPSSAAGKAGAVL
RGSNESLPPLTSWYEREEVLSDSKISKRRAGRLHKWIGDTCLLLGSPKDA
LEHYSQSMSDTKASSDPLWHAGCLEGYAACLSAMSDADHPTVHGDQALAL
LRDMAKDKELEKAGQEGSSTWTVLAEAVVSEKCQEALAVLRGCPPLGSLE
VELCFKTARFHACAQPNPRWDEALAALLRALTVPDMPMQVQLERSIEAAV
LCEGMGLKRKAALFAHLSAMLCSDFETWNTAHLLARMAGEGYGALLPPPR
TPSSSLSLSAATTRSHPDAPSPPLAATVVAPLDGRGGGG
back to top

mRNA from alignment at P-littoralis_Contig675:65129..75562-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig675.13.2 ID=mRNA_P-littoralis_Contig675.13.2|Name=mRNA_P-littoralis_Contig675.13.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=10434bp|location=Sequence derived from alignment at P-littoralis_Contig675:65129..75562- (Pylaiella littoralis U1_48)
GAGGTAGCTGCGTGTGTTGTGTGTGTTCCGTGTGTTCGCTGCTGGTCAGT
GCTCTCGTCGTGGTGGCTGCACAAACACCCAACGGCGACCATGCCGTCCA
AACGCGTGTGGGTAAAGCAGGGTCTTGACTCGCACCGCTCGGCCCAGGTG
CTGCTGGTTCCGCTGGGGAGCATTCCTCCGGATGTGTATGCCAAGTACTG
CGAGATCTTGAGGCGATTTAGGTGCGGTTCCACTGCTATCATGTACCTAT
TCTGCAGCGTATAGGGCAGTATGTCGTAGAACAGCAGGCATGACCCAAAG
GCCCGCCGATGCACAGTAGAGCAGCAGCGCATTACTGCCACAGCACGCTG
AGCAGTGCCGTGCTATCACTCCTGTCTACACCTTTGGTATCGGTCATAGA
TGGCTTACAAACTGAGTGTTTTTTCAGGGATCAGACACAGTACAGAATGC
ACTTTAGCGCACGTATCATTCCGACCGCAACGGTGCAAGTTACTGCTGTC
TATGATATCACACCTACGGATGATACCTACTGAGTACTCTCAGCCGTAGC
GGTTTTTTTGCCGTCTCGCTACACCTCTGCCGGTCGTGTCGCAACTTGCT
GTTTCAATTCGGGCGCAAGAGTACCGCTGTACTGCAGACTGCAGTACTTG
ATTCAGACAAGCAGCCATCGACTACGGTAATGAGGTTGGACCTCTCGACG
GGCTTGGAATAAATGTTTTCCTTGAAGAAAGTTCTCCGAAACATCTTCAA
AGAGGCAGCTCGAAGCTTCACTGCTGCTGCTGCACTGCAGGTTTTGTCTT
TCTGTTTTGCGTTATCATCCATTTGCCCAAAAGTCCCCTCAACTCTCCCT
CTCTCCTTCTGCGGCACCAGCTGGGTAACGTTTTTTCAACCCGACTTGAC
CTGTCGGGTGCGCACAGCTACAAGCACTGCCGTTCGTTCGCAGATCATAC
AGAAATGCCGCATGTTATAACAGAGTATTCCCTAGGGAAGATCAAGAGAG
TTTAGCCACCGCAGCAACAGACGGTAGTGCAAGTGTACCCTGCTGCTGTA
CCCCGACGCGTGCTGCCGTCGCGTGCCTCTCCTCCCGCCTCCACTCTTGC
AACCAAGATGCCCCGAATAAAATACTTCCCCCCACACCGCACCGTAGTCC
CCCCATCCCCCCCTCCCCCCCCCTCCCCCACCAACAACCATTTTTTTCTT
CTCCAGCACGTTCCCGATACCTGGCCTGACATACACCGCGCCGCGCCATC
GCGGAACCCCCCCCCTCCCCCCCCGCCTCCCCTCATTCATTTTCGTTCTG
CTGCAGTACGATCCCGATGCAAAATCTGACAGCTCCGGGTGACTGGAACC
GGCAGAATGGTGCCCTGAAGCACTTCAACTGGTCCGAAGGCTGCTTCAAC
TTTCACTTCATCGACCAGGACACCACCGACGGAGGGCCCAGCGAATGGGA
AGACTATCAGGGTACGTATGTAGGCCCATGCATATTCGGCGGGTATCCCT
ACGGTACTACTGTAACTATCACATGTACAATGACGAAAATCTACTTCGAG
TTCACCGTATCGAAAAAAAAAGGGCTGTTTTTGTGCGCGATGTAAGTTGG
TGGAGGGATTATGTTCCTCGAATTTCTGTCGTTGATTTCGCTCGTTGCAC
GAATATCATATACTGACGATGCCCTATGTTTGTAACATGCGTATCATACC
GACGTAATATTAATGTTCCGCCTCACCCCCCCCCCCCCCCCCGCCACCCC
CCGGCTCCTCTCTTCCCCCCAAAACAAAAAAGCCTACCGAAGAGTCCTGG
GGGTCATCGGGGTCGTGCACTTCCCCTCTTGTGAGGGGGGCCACGCGGAC
TTCAAGGAGCTCGAGAAGCAATTCAACACGGTGGTGGCCGGCTACAAGCA
CGCGAGGGCCACGAGGATGTTCGCGTTCGGGCACTCGTTCGAGCAGGGAG
ACTACCCCGACATCCTGGACCCCCAGAGGGACATCGTTTTCCCCCCGGAG
CAGGAGTTCGAGGTGTGTGTGTGTGTGTGTGTGATATCCCTTGAGATGTG
TTGTTTGCTGCTGTTCTGTCGAGCTTATTAGGTGCTCATATGATGCGTGT
GTGTGAGATCCCTGAAGATGCGTGGTTCACACTGCTCTGTCGAGCTTATT
AGGTGCTCAAATGATGTTGTTGTTGTTGATTCTCACATTAGCTCACTACC
GCCGCAGGCTAGCCCGTGGTCACAAACCAGGCACATATCGTGCTAGGAGG
AAAAAAATAAAAAAAATAAACTAGATGGACTATGATCACCCACAGTCAAG
TCAGATATGGTACCGTTGGGGTACCATCTGTGGTGGCCAGAGTACCAAAC
AAATACAGAAAAAATAACAGGCTCGAAAGAAAAACAAAAATTGGAAACAG
TCCGTTAAACAAAAAATAACCAAGACAAACCTCAACCATAACCATATACT
TCGAAGTACTTCGTACATCGAACCAGGGCCCAGGGCCATGACAGACCAAG
GCAAACGCAAACCAGGGCGATGGTCCAGTAACTATAAGATCAATACGAAA
GACAAAAAATAAAATAAAAAAGAAGAAGATACAGGGAGGGCACAAAGACT
GAGGGAGTGCATTCGTAGACAAACACAACAAACAGGCCGCCAAGCAAAGA
GGAAGCAGGGGAACGAAAAGGGAAAAGAAGACCGGACGTACCGGAAGTCG
GGGGGGGGGGGGGAGGTGATAAAAAGTAAAATAAAAGGCGTGCAATCAAT
CGCAAACATGTCTTGCCACAAGGTCTGCCTGTTCACGCTTGCTCTCCTCA
GTCGCACTCATGCCTCCTGCTACTGGCACCACCGTACCCAGTTATTTCTG
CCCCACATCTTCGGCAGCAGCTACACCACCACTCCGCCCTACAGGTTTTC
CACTCCGGCCACCCCGTAGCTTGGCATTGGACTGCTTCTTCTTGTGCTGT
GCAACTCCAACCCCACTACCCCGCTGTCCTTGTGCCCCCCCGTACCCCTC
CTCTCGTTTATCCCCGCCATCCGTTCTCCCTCTTTTGGTCAAGGCCTGCC
CCTCAGCCGCGTCCCTCTCCCTTTTCCGTCGACGTGTCTCTGATAAGTCT
CCCTCTTTCTTGAGCCACTCGTCCGTGAACCGCCGCGCACCCTCATCGAT
CCTGTCGTACCACTCGTCAGCTCTTTTGGCACTTGCCTCCCACCCCTCCT
TTTTGTCGACCACGATGTCGAACGCTTCGAGGTCCTCCTGCATTCGCCTC
AGCCAGTCAAACTCTTGCCCCCCAGATACCTCGCTCCCCCTGCAATTCTC
CCAAAAGAGCAATTTTCGGGAGTCTCTCGTCTCTCATGCGCGCAACGAAT
CCTGCGAAGCACAGTCGCCGCTTGCGCACGGTGGCCTCAACGCTCTCGTT
GCAACCCGCGGTGATCAGGGCTTTGGCGTAGGAGAGGGGTCGGTCTGTTC
TCTCCCTCTTTTTCCATCCGATGCAGCGAAGGAGGAAGAAGTGGTGGGCT
GACCGAAGCTTGCGGTACTCCGCTGGCTTCAGATTCCATGTGACACACCC
GTAGAGTAGGGTCTCCACGACTTCAGCTTGGAGGAGTCGTACTTTTAGTC
GAAGAGGGGCCCCCGGGCGGTCGTACATTGCCTGGCTGTTGCGCCGGAAG
CAGGCGTGCGCTCGCTGCACTCGGTGGTTAATCTCGCCCTCAATGCTACC
GTCCTCACAAATCTTACCCCCGAGATAAACAAAGTATTTCTTCTGCTTGA
AGACCATCCCGGCAGCGTCGATCGTGAACGAGCACGCCTCCATCCCTTTC
GCGAGCATACACATGGTCTCCGTCTTGGGTTCTGACACCAACAGCCCAAA
CCGCCCGGCCACACGTAGGATGATCGACATCATCTTCTCAAGGCTCCCAG
GTGATTGAGATACAATACAGGCATCGTCGGCGTAGAGCATACTCCAGATT
GACTTCACTGCCTCCACCAGTCGGGCGTTCCTCCCCTTCCCCTTCGTCAC
CTTCCTCTTGATCTTGGCCATGTCCGCCATCACCTCCGCGTCCTTGCTGA
TCTCGGCAAAGGCCACCATGAGCATCGCAGCAAAGAAAAGGTTGAACAGC
AGGGGTGCCAGATTGCATCCCTGTCGGAGTCCCTGCCCCACATCAAACCA
GTCGGAGCACCTCCCGTCGTCCATCCATACGCATGCTCTCATCCCGTCGT
GGAATTGGCGAATGACCGCAAGCATCTTGGGGGGCACTCCGAGCCGCTTG
AGCACCGACCACAGTAGTTCCCGGTCTACGGAGTCGTAGGCTTTCGTGAG
ATCGATAAAGCAGGCGTACAGTGGGGTTGACTTCTTCCGCGCAAGCTCGT
GTAGGCGTCGAACCACGATCATCATGTCAACCGTTGAGCGGTTTGGTCGG
AAACCGCTCTGTTCCTCCGGCAGGATGCCCTCTCTTTCGCAGTAATCGCT
TAGCCGGGTGGCGACCAGCTTCAAGAGTACCTTGCCAGCGTGGGCCACAA
GGGAGATGCCTCGGTAATTGCCGCATTCCGTCTTGTCCTTCTTCTTGTGC
AGCACCTTGATGTGTGTGTGTGTCTGATCCCTGAAGATGTGTGGTTGGAC
TGTTCTGTTGAGCTTTTTTAAGGTGCTCATACATATGGTACTCTGTTGTG
TGCATGCGTGCGTATGTGATACGAAGTATCCCTGTATTTCGTGGTGTTGT
TATGATACGGCGGTTGTGTCGGTACCACTGTCGATGCTGTCGACCGGTGT
TGTTTAGTTTTGCTCATTTTAGCTCGTCTGATGAAACCCCCCCCCCAAGC
ACGTGGCTGGTACCACGACAAGCCAGGGACAGAAGAGAGAGAGAGAGAGC
CCTAACCTGCGGTATAGTGACGTTAATAATACACACTTATCGTACAATGT
CGTTCGTCGCGCACGGCAGAACATTTAGGGGTGCGCCTTTTATTCAGTAC
GACGTCCAGTTAGCTCACCGGGGCCCGACTTTGATTATCGAGCAATCTCT
CTCATTTTCTCTCTCTCTCCGTGTGTGTGTGTTTATGTTTTTTTTTTTTC
GCCCTTTGACAGGATGGTGGGAGCACGACGGAGCTGCACATGGCCGTCAG
CCTCTACGACGTGGCGGTCTCCATCATCAAGAACCTCGCGGCGGACATCA
AAACTTGGAGCTCGCCGAGTCCTTCGTCCGCGGCGGGCAAGGCGGGGGCT
GTGCTACGGGGCAGCAACGAATCCTTGCCTCCACTCACGTACGTACGCAT
GCATGCATTTTTCCAGAAGGAGGGTGTCCCAGGAAGGACATGATACCCCC
CCCCCCCCCCACGCGCACACCCTTCCGCACTCCACACCCACACCCACACC
CACACCCACACCCACACCCACACCCACACCCACACCCACACCCACACCCA
CACCGTTCGGGGTACAAGGGCGATGTTTGACTCTCAATTCTCTTCGCAAC
GGCGAATCGTGCCAAGGGTCCACAACAACGTATCTCAGGAAACTCCCCGT
TTGCGATGGACGTTTTGTTTGCTGCCAACGCCGGTGCAATGGCGCGCTGC
TGCTGTCACTCTGTACAGCTGTTGTAGATACACAAGCCAACAGGCTCATC
GTTTGGCGCGTGCAACAACCATGGACCATCACCAGGTGTCTTTGTGAACG
TGACATGATCCCATTCCAGATGAGGCGTCGCCAGGCGGGCCTGATCTCGA
CGGACGAACTTTGCGGTTACCCCGCAAGAATTGCTGATTCGTGGGGGGAG
GGGGGGGTGGAGCAAACGGTTGAAGCACCATCACACAGATCAAATTGCTG
TACATGTTTCTCCCTTGGTGTATTTACATGCACCAACAAACACGCACCAA
CACATACACGCAAGCACACAAACACACAAACACGCAAGCACACGAACATA
CAGACAACACAAATAAACAAACGAACAAACAAACAACAAACAAACACACA
AAACACACAAGACACACAATCACACAAACACACAAACAAACAAAAAAAAC
AAACACACAAACACATAAAACATGCCTACACAAAACACACAAACAAACAC
ACAAACACACAAACACACAAACACACGCAGATCGTGGTACGAGAGAGAGG
AAGTGCTGAGCGACAGCAAGATCTCCAAGCGGAGGGCGGGCCGCTTGCAC
AAGTGGATAGGGGACACCTGCCTGCTCCTGGGCTCTCCGAAGGTCTGCGT
GTCGCCTGTCGCCGTCCCACCCCCAACAACGAAAACCACCCCTCTATCGT
ATGCCTCCGAGTGATACCGCGGTTTCCCATGTGACGTTTCACCGGGGATG
CACTCAAACATGCATACCCCCCTCGGTTTGAGTATTGGAAACATGCTACC
CCCCCCCCCTCGACTCGATTATATTGAGTACGCTCTTGACTGTGTTTTGT
TGGAATGATGCCACGCCCGATTTGGGGTCACATCGGCAAAAAAGTAGCGG
TCAGTCCCGGCGTGAACGTGTCGTCGACCTACATGCTTCATGCGTGTACT
GTATTGTATTCACTCCGGAGCCGTGCGCGCCGCTGCAGCCCACCCCCGCC
GGCCCACAGCACCAACACGAAAGAAAGTACGCCTTGGTGACGAAACCAAA
CTTATTGAATCCAATCCAAACCGACCCAACCCGACACGAACCAAACCGAA
TTTCCGACCCAACCCAGCCCAACCAAACCAAATCGTACCATTCACTACCA
AAATGACAGGACGCCCTTGAGCACTACAGTCAGTCCATGTCGGACACCAA
GGCCTCTTCGGACCCCTTGTGGCACGCGGGTTGTCTAGAGGGCTACGCGG
CGTGCCTGTCGGCCATGAGCGACGCGGACCACCCCACGGTGCACGGGGAC
CAGGCGTTGGCCCTGCTGAGGGACATGGCGAAGGACAAAGAACTGGAGAA
GGCGGGTCAGGAGGGCTCTTCCACTTGGACCGTTCTCGCCGAAGGTGGGA
GCACAAACGAGCACAGCAGTCTACGGTAGTCCACCGGTGAAAAAGTGGGT
CGTTTTTTTCGTACACGCACGTCGTTTTGTTCCGTTCGTCGTTTTTTTTT
CGTCTCTTTCCTGTCTTGTCGTGTCTTGTCCTGTCTTGTCCTGTCTTGTC
CTGTCTTGTCCTGTCTTGTCTTGTCTTGCCCTGTCTTGTCCTGTCTTGTC
GTGTCTTGTCCTGTCTTGTCCTGTCTTGTCCTGTCCTGTCCTGTCTTGTC
TTGTCTTGCCCTGTCTTGTCCTGTCTTGTCCTGTCTTGTCTTGTCTTGCC
CTGTCTTGTCCTGTCTTGTCCTGTCTTGTCTTGTCTTGTCTTGTCTTGCC
CTGTCTTGTCCTGTCTTGTCCTGTCTTGTCCTGTCTTGTCCTGTCTTGTC
TTGTCTTGCCCTGTCTTGTCTTGTCTTGTCCTGTCTTGTCCTGTCTTGTC
TTGTCTTGCCCTGTCTTGTCCTGTCTTGTCGTGTCTTGTCCTGTCTTGTC
CTGTCTTGTCCTGTCCTGTCCTGTCTTGTCCTGTCTTGTCCTGTCTTGTC
CTGTCTTGTCCTGTCTTGTCTTGTCTTGCCCTGTCTTGTCCTGTCTTCTC
CTGTCTTGTCCTGTCTTGTCCTGTCTTGTCCTGTCTTGTCCTGTCTTCTC
CTGTCTTGTCCTGTCCTGTCCTGTCTTGTCTTGTCTTGTCTTGTCTTGTC
TTGTCTTGTCTTGTCTTGTCTTGTCCTGTCTTGTCGTGCCTTGTCTTGTC
TTGTCCTGTCTTGTCGTGCCTTGTCTTGTCGTGTCTAATCTTTCCACTCC
GCAGCAGTAGTCCACCGCAAATTGGATAATTATTCGCACGCACAAACGTT
CGTTCTTGCTTTGTTGTGAACGTGCATTGCGGAGAGCAATCGGGGGGGGC
AGGGGGGGTGGGGGGGGAAAGGACTCCTACGTCGGAGAGACCTTATACGG
CATCCGTCGTTGAATCGTCGGGTGAACACCTGCACAACAAGAACAAACGA
ACGAAGCGTGCAACGCACCTCATTCCTTTCAAAGCATCATCAAATTGTCG
CCCCGCGCCTCCTCCGGCCGGCAACTTGGACGCTGCTTATTCACAGCCGT
CGTGTCAGAAAAGTGCCAAGAGGCGCTGGCGGTGTTGCGAGGCTGCCCGC
CGCTGGGGTCGCTCGAGGTGGAGCTGTGCTTCAAGACCGCGAGATTCCAC
GCTTGCGCGCAACCGAACCCGAGGTAGGCGTTGGTGTGAAGCGGCAGTGC
GAGGCAGCGCTTGGGCCACTGTATGATCAGTGTCGGAGATCGGCGGCAAA
ATCAGTTCCAATCTCCGCTTTTTTTTATATTTTTCTTCATTTTTGAGATC
TGCTGGTAAAAAAAACGATTGTCGATAATTTTTCGATTTTTCCAAAAAAA
GTGGCTGTGATCTTTACTCGGATCTCAATCTCACGGAAGAAGGGGGCCGA
TCTCGGCGAAAGCAGGGGATAGGTTTGAACACTCATCCTCTTTTCATCTA
TAGAACCCCCCACGAAGATCGTAAGACTGGGCCAAAAAAAACTCGAAAAA
TCGCGATCTAGATCATCAAATCGATCCCGATTTCCAACACTGGCTAGATA
TCTCGGTTTCTGGCTGCAGCTACTGTTACTCTCTTTCTTTTATTTTCTTT
TCTCTTTATACTGACTCATTGTTTGCAACGCACGTGTGCACACAGCGTGT
CATAGTATCATAGTGCAGCGCTACCACTGCGGCATGCACCGGTTACGTAC
AGCGTCAATCATTCTTAGTATGATGGCCTTTCTTTGTTCTCTCGAGGCTT
TTCGCCAAAGGCGTAAACGTACTCCGCTGCTGCTGTTAAACGTGCGTGTT
TCCCACGTGATTTGTGTTGCCCACGGGAAGAGAAGCAGCAGCATCACGGC
GGTAGTGAGTGCTATGTGCTGGAGGCACACGCGATTGTGTCTGTTTGTGT
TTGTGTTTGTGTTTGTGTTTTGTGATTCTGTTAGCGACGGCAGCGCACCG
TTTGCGCACACTCACGAGTGCACTTGGCATAGGCCTGCCTCTACCTCGTT
TCTCACTGCTATTGCGACCTGTTTTCGTTGCTCTGTTTCGTTTCGTTTCG
TTTCGTTTCGTTTCATTTCGGATGGACGCTGCGGCCGCCGCTTTTTGTTC
GGCTCGGCCGGGGTGGGGGGGGGGATCGGGGTTGATGACGATCTCCACTC
AGGTGGGACGAAGCCCTGGCGGCGCTGCTGAGGGCGTTGACGGTTCCGGA
CATGCCCATGCAAGTGCAGCTCGAGCGGAGCATCGAGGCTGCGGTGCTCT
GCGAGGGCATGGGGCTCAAGGTATCTCGATCTAGACAGTGTTGCCTACGT
GAAGAAAGTAAAGTTTCTTCGTAGAAAATAGGAGGAAGCACCGCAGAAAA
AGGAGTAATTTACACACATCGCATCTCACCGCCTATGCACAGCAGTACCG
CTTTTTTGTTTTGAAGCGGAGCTCCGAAAAGGCGGACACGATTGCATAGT
CCCTGCGATACACACGCGTTTCTATCCATGATGTGTAAGAGACGGGTTTT
TCGCACATGTGCACAAGGGCATTTCAAAGCTCGCGCACGGGATTGGCAGG
CGCGCAGCCTGTTCCGTGGCTTCGCTGCCGTGTAGGCGTGCGGGACGTCT
GTCGGCCAGAAGGCTACTCTCCCCCAGGTCCTGGCGAAATGGTTGGGGTC
GTGCGCGCCGGCGCAGATGGAGTGGGGGGCGGAGAACAGGGGGCTTGCAG
GGGATATGCAGGCACACGATCGTTACAAGTATGATACGACGTGCTGACGG
CGACACTCTCTTTAAGTACTCGTGGTTTTCCTCCCAGCCTTTTGACTTCC
CTCCCTGCCTCCTCCCAACCCCTCCCAACGCCTCCCCTCCCCTCCCCTCC
CCCCCCGGCCCCCATCCTCCCTCTCTACATCTCTACAAACCTTATTTCCT
TGTCCGCCCGCTCGGCCGTCTCCGCCCCGCCACCGTGGCAAAAAACGACC
CTACACGCTGCACGAAACGCGACGCTCGCGACGACAACACCACCGACCGA
CACCAACACCAACACCAATACCAACACCAACACCAACACCAACATCAACA
CCGACATCGACACCAACAACAACAACAACACCAACAACAACACCAACAAC
ACCGCCAACACCAACGACACCAACAACACTGACGACACCAACGGCACCCA
CGACGACGACGACAACGACAACGACACTACGACGCACAGCGCAAGGCCGC
CCTCTTCGCGCACCTGTCGGCCATGCTCTGCTCGGACTTCGAGACCTGGA
ACACGGCGCACCTCCTCGCCCGCATGGCGGGGGAAGGGTACGGTGCACTG
CTTCCTCCGCCCCGGACCCCCTCCTCTTCTCTATCGCTGTCGGCAGCAAC
AACCCGAAGCCATCCCGACGCCCCTTCTCCGCCCCTCGCCGCTACCGTGG
TTGCGCCGCTGGACGGTCGTGGCGGCGGCGGCGG
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig675:65129..75562-

>mRNA_P-littoralis_Contig675.13.2 ID=mRNA_P-littoralis_Contig675.13.2|Name=mRNA_P-littoralis_Contig675.13.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1617bp|location=Sequence derived from alignment at P-littoralis_Contig675:65129..75562- (Pylaiella littoralis U1_48)
GAGGTAGCTGCGTGTGTTGTGTGTGTTCCGTGTGTTCGCTGCTGGTCAGT
GCTCTCGTCGTGGTGGCTGCACAAACACCCAACGGCGACCATGCCGTCCA
AACGCGTGTGGGTAAAGCAGGGTCTTGACTCGCACCGCTCGGCCCAGGTG
CTGCTGGTTCCGCTGGGGAGCATTCCTCCGGATGTGTATGCCAAGTACTG
CGAGATCTTGAGGCGATTTAGTACGATCCCGATGCAAAATCTGACAGCTC
CGGGTGACTGGAACCGGCAGAATGGTGCCCTGAAGCACTTCAACTGGTCC
GAAGGCTGCTTCAACTTTCACTTCATCGACCAGGACACCACCGACGGAGG
GCCCAGCGAATGGGAAGACTATCAGGCCTACCGAAGAGTCCTGGGGGTCA
TCGGGGTCGTGCACTTCCCCTCTTGTGAGGGGGGCCACGCGGACTTCAAG
GAGCTCGAGAAGCAATTCAACACGGTGGTGGCCGGCTACAAGCACGCGAG
GGCCACGAGGATGTTCGCGTTCGGGCACTCGTTCGAGCAGGGAGACTACC
CCGACATCCTGGACCCCCAGAGGGACATCGTTTTCCCCCCGGAGCAGGAG
TTCGAGGATGGTGGGAGCACGACGGAGCTGCACATGGCCGTCAGCCTCTA
CGACGTGGCGGTCTCCATCATCAAGAACCTCGCGGCGGACATCAAAACTT
GGAGCTCGCCGAGTCCTTCGTCCGCGGCGGGCAAGGCGGGGGCTGTGCTA
CGGGGCAGCAACGAATCCTTGCCTCCACTCACATCGTGGTACGAGAGAGA
GGAAGTGCTGAGCGACAGCAAGATCTCCAAGCGGAGGGCGGGCCGCTTGC
ACAAGTGGATAGGGGACACCTGCCTGCTCCTGGGCTCTCCGAAGGACGCC
CTTGAGCACTACAGTCAGTCCATGTCGGACACCAAGGCCTCTTCGGACCC
CTTGTGGCACGCGGGTTGTCTAGAGGGCTACGCGGCGTGCCTGTCGGCCA
TGAGCGACGCGGACCACCCCACGGTGCACGGGGACCAGGCGTTGGCCCTG
CTGAGGGACATGGCGAAGGACAAAGAACTGGAGAAGGCGGGTCAGGAGGG
CTCTTCCACTTGGACCGTTCTCGCCGAAGCCGTCGTGTCAGAAAAGTGCC
AAGAGGCGCTGGCGGTGTTGCGAGGCTGCCCGCCGCTGGGGTCGCTCGAG
GTGGAGCTGTGCTTCAAGACCGCGAGATTCCACGCTTGCGCGCAACCGAA
CCCGAGGTGGGACGAAGCCCTGGCGGCGCTGCTGAGGGCGTTGACGGTTC
CGGACATGCCCATGCAAGTGCAGCTCGAGCGGAGCATCGAGGCTGCGGTG
CTCTGCGAGGGCATGGGGCTCAAGCGCAAGGCCGCCCTCTTCGCGCACCT
GTCGGCCATGCTCTGCTCGGACTTCGAGACCTGGAACACGGCGCACCTCC
TCGCCCGCATGGCGGGGGAAGGGTACGGTGCACTGCTTCCTCCGCCCCGG
ACCCCCTCCTCTTCTCTATCGCTGTCGGCAGCAACAACCCGAAGCCATCC
CGACGCCCCTTCTCCGCCCCTCGCCGCTACCGTGGTTGCGCCGCTGGACG
GTCGTGGCGGCGGCGGC
back to top