prot_P-littoralis_Contig672.30.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig672.30.1
Unique Nameprot_P-littoralis_Contig672.30.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length129
Homology
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BLAST of mRNA_P-littoralis_Contig672.30.1 vs. uniprot
Match: D7G0U1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0U1_ECTSI)

HSP 1 Score: 213 bits (541), Expect = 1.690e-67
Identity = 98/118 (83.05%), Postives = 109/118 (92.37%), Query Frame = 0 
Query:    1 MDQDGLFLMLKMCNGCSHKKGSWKKCMSRRHNPRMSTVRQEELTHGHRQCVKPDQAITIYKLRDHETNDEFLEFDEEIIFQTACLDCLNIKSCIK--HKLVDWRPTFAGGRMAGSPSP 116
            MDQDGLFLMLKMCNGCSH KGSWKKCMSRRHNPRMSTVR++ELT+ HRQCVKPDQAITIYKL DHETN+++LEFDE+IIFQTAC  CLNIKSC++  HKL+DWRPTFAGGR+AGS  P
Sbjct:    1 MDQDGLFLMLKMCNGCSHNKGSWKKCMSRRHNPRMSTVREDELTYSHRQCVKPDQAITIYKLHDHETNEDYLEFDEKIIFQTACRMCLNIKSCLREGHKLIDWRPTFAGGRVAGSSHP 118
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BLAST of mRNA_P-littoralis_Contig672.30.1 vs. uniprot
Match: A0A6H5LER2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LER2_9PHAE)

HSP 1 Score: 183 bits (464), Expect = 1.630e-52
Identity = 89/113 (78.76%), Postives = 99/113 (87.61%), Query Frame = 0 
Query:    1 MDQDGLFLMLKMCNGCSHKKGSWKKCMSRRHNPRMSTVRQEELTHGHRQCVKPDQAITIYKLRDHETNDEFLEFDEEIIFQTACLDCLNIKSCIKHKLVDWRPTFA-GGRMAG 112
            MDQDGLFLMLKMCNGCSH KGSWKKCMSRRHNPRMSTVR++ELT+ HRQCVKPDQAITIYKL DHETN+++LEFDEEIIFQTAC  CLNIKSC++   V +  TF  GG+ AG
Sbjct:    1 MDQDGLFLMLKMCNGCSHNKGSWKKCMSRRHNPRMSTVREDELTNSHRQCVKPDQAITIYKLHDHETNEDYLEFDEEIIFQTACRMCLNIKSCLRLGKV-FSATFGKGGKSAG 112
[Close]
BLAST of mRNA_P-littoralis_Contig672.30.1 vs. uniprot
Match: D7G0T9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0T9_ECTSI)

HSP 1 Score: 107 bits (266), Expect = 2.100e-24
Identity = 49/111 (44.14%), Postives = 71/111 (63.96%), Query Frame = 0 
Query:    1 MDQDGLFLMLKMCNGCSHKKGSWKKCMSRRHNPRMSTVRQEELTHGHRQCVKPDQAITIYKLRDHETNDEFLEFDEEIIFQTACLDCLNIKSCIK--HKLVDWRPTFAGGR 109
            MD DG  L++  CN C   K   + C+ R+HN R++ V+++EL   HRQCVKPDQ +TI+KL D  T +E +E+  ++IFQ  C  C+++K+CI   H+L DW P    GR
Sbjct:    1 MDVDGTCLVVSPCNNCRINKNGVQACIMRKHNARLTAVKRDELAARHRQCVKPDQTMTIFKLVDRNTGEESVEYSPDMIFQRPCASCIHLKTCILGGHELTDWTPEGGRGR 111
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig672.30.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G0U1_ECTSI1.690e-6783.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LER2_9PHAE1.630e-5278.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0T9_ECTSI2.100e-2444.14Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig672contigP-littoralis_Contig672:155913..160954 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig672.30.1mRNA_P-littoralis_Contig672.30.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig672 155913..160954 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig672.30.1 ID=prot_P-littoralis_Contig672.30.1|Name=mRNA_P-littoralis_Contig672.30.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=129bp
MDQDGLFLMLKMCNGCSHKKGSWKKCMSRRHNPRMSTVRQEELTHGHRQC
VKPDQAITIYKLRDHETNDEFLEFDEEIIFQTACLDCLNIKSCIKHKLVD
WRPTFAGGRMAGSPSPFSASDQPPPLLR*
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