prot_P-littoralis_Contig67.117.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig67.117.1
Unique Nameprot_P-littoralis_Contig67.117.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length233
Homology
BLAST of mRNA_P-littoralis_Contig67.117.1 vs. uniprot
Match: D7FKS2_ECTSI (50S ribosomal protein l19-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKS2_ECTSI)

HSP 1 Score: 293 bits (750), Expect = 7.350e-98
Identity = 160/235 (68.09%), Postives = 177/235 (75.32%), Query Frame = 0
Query:    1 MLCNYVRGLAPRFACCGERGSAKINVSLAVASLPQVSQLHSAVVSAERKP--SLVGRWRSTPSSDEEHGQRRWSSTDVAP-AVKGLTLNVDEKVQRVKHRIPQKRASFLLNELREEQRNGERCALPDLKIGDAIEVTMFANKKAARTTQARGVLVRKVNRGVDSTILLRDVINANSVEHHIPLFSPLIQSVEVMERAFIYQGKLKGKRVRPARIYYIRNLDQKFYRITGGGGSDN 232
            MLCN    LA R     ERG   I+ +LAV      S L SA     R P  +  GRWR             W+S      AV+G+TLNVDEKVQR+KHRIPQKRASFLLNELR+EQRNGERC LPD+KIGDAIEVTM+ANKKA RT+Q RGVL+RKVN+G+DS+ILLRDVIN N VEHHIPLFSPLIQSVEVME AFIYQGKL+GKRVRPARIYYIR+LDQK YRITGGGGSDN
Sbjct:    1 MLCNTACRLATRLVGSRERGVVAISRNLAVHEAAS-SHLPSAAAGGSRAPGEASAGRWR-------------WASMQATQTAVEGITLNVDEKVQRLKHRIPQKRASFLLNELRQEQRNGERCELPDMKIGDAIEVTMYANKKATRTSQVRGVLLRKVNKGIDSSILLRDVINGNPVEHHIPLFSPLIQSVEVMETAFIYQGKLRGKRVRPARIYYIRDLDQKLYRITGGGGSDN 221          
BLAST of mRNA_P-littoralis_Contig67.117.1 vs. uniprot
Match: A0A835ZJ13_9STRA (Translation protein SH3-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJ13_9STRA)

HSP 1 Score: 131 bits (329), Expect = 1.950e-34
Identity = 66/163 (40.49%), Postives = 102/163 (62.58%), Query Frame = 0
Query:   67 GQRRWSSTDVAPAVKGLTLNVDEKVQ---RVKHRIPQKRASFLLNELREEQRNGERCALPDLKIGDAIEVTMFANKKAARTTQARGVLVRKVNRGVDSTILLRDVINANSVEHHIPLFSPLIQSVEVMERAFIYQGKLKGKRVRPARIYYIRNLDQKFYRITG 226
            G RR SS   A +         ++ Q   R+KH+IP+KRAS LL  +++E         PD K GDAIE  M     A +    RG+++ +  RG+ S+ ++RDV+   ++E  +PL+SPL++S+ V++R  IY+GK +GKRVRP++IYY+RNLD K+ ++TG
Sbjct:   23 GLRRLSSQSTAQSSTEQHEGFQQQQQPQRRIKHKIPEKRASMLLGFVQKEAIAARPLDFPDFKTGDAIECQMLPYMTAPKAEPVRGIVLGRFKRGIASSFIVRDVLYDEAIERRVPLYSPLLKSITVLKRRAIYEGKQEGKRVRPSKIYYLRNLDNKYSQVTG 185          
BLAST of mRNA_P-littoralis_Contig67.117.1 vs. uniprot
Match: A0A7S2P9J5_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2P9J5_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 3.870e-21
Identity = 58/164 (35.37%), Postives = 99/164 (60.37%), Query Frame = 0
Query:   74 TDVAPAVKGLTLNV--DEKVQRVKHRIPQKRASFLLNELREEQRNGERCALPDL-----KIGDAIEVTMF-----ANKKAARTTQARGVLVRKVNRGVDSTILLRDVINANSVEHHIPLFSPLIQSVEVMERAFIYQGKLKGKRVRPARIYYIRNLDQKFYRIT 225
            T VAPA      ++  DEK  + K + P+KRAS L NEL+ E     + + P++     K+GDA+E+ +       N +  R  + RGV++ + N+G+D+ I L+DV+    VE  + L SP+++S++V+E  F+ +GK KG+RV+ A++YY+R+   +  R+T
Sbjct:    2 TGVAPADMPYLHHIGHDEK-PKPKFKNPRKRASKLFNELKLEAVADSKSSKPEVWEVPFKVGDAVELEVLDSGGVQNPQNKRYDKIRGVVLGRENKGLDTGIYLKDVLFGEHVERKVKLHSPMVKSLKVLEEGFVNRGKKKGRRVKRAKLYYLRDRKPEETRVT 164          
BLAST of mRNA_P-littoralis_Contig67.117.1 vs. uniprot
Match: B8BTE2_THAPS (50S ribosomal protein l19-like protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BTE2_THAPS)

HSP 1 Score: 95.9 bits (237), Expect = 4.610e-21
Identity = 52/141 (36.88%), Postives = 90/141 (63.83%), Query Frame = 0
Query:   95 KHRIPQKRASFLLNELREEQRNGERCALPDL-----KIGDAIEVTMFA-----NKKAARTTQARGVLVRKVNRGVDSTILLRDVINANSVEHHIPLFSPLIQSVEVMERAFIYQGKLKGKRVRPARIYYIRNLDQKFYRIT 225
            K + P+KRAS L N+L+ E  N  + + P++     K+GDA+E+ +       N +  +  + RGV++ + NRG+D++I L+DV+    VE  I L SP++++++V+E  F+ +GK KGKRVR A++YY+R+   +  R+T
Sbjct:   10 KFKNPRKRASKLFNQLKLEAVNKSKESKPEVWNVPFKVGDAVELQVLDSGGVDNPQNKKLDKIRGVVLGRENRGMDTSIYLKDVLFGEHVERKIKLHSPMVKTLKVLEEGFVNRGKRKGKRVRRAKLYYLRDRKPEETRVT 150          
BLAST of mRNA_P-littoralis_Contig67.117.1 vs. uniprot
Match: A0A7R9UET9_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UET9_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 1.210e-20
Identity = 47/133 (35.34%), Postives = 82/133 (61.65%), Query Frame = 0
Query:   94 VKHRIPQKRAS----FLLNELREEQRNGERCALPDLKIGDAIEVTMFANKKAARTTQARGVLVRKVNRGVDSTILLRDVINANSVEHHIPLFSPLIQSVEVMERAFIYQGKLKGKRVRPARIYYIRNLDQKFY 222
            +KH  P+K+A+     L NE+++E R  +   LPD ++GD + V+    K   +     GV++    +GVD +IL+R V+  +  E  +PL+SPL+++VE++E   I++GK  G+RVR +++YY+RN +   Y
Sbjct:   68 LKHVGPRKKANKVMTTLANEMKKELRQRQGIELPDYRVGDKVRVSFLQAKSEEKPDDYVGVIIANPKKGVDESILVRGVVKGDCFEVRVPLWSPLLKAVEILEPRCIHKGKKAGRRVRRSKLYYLRNREPSTY 200          
BLAST of mRNA_P-littoralis_Contig67.117.1 vs. uniprot
Match: A0A7S3MA30_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MA30_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 1.290e-20
Identity = 52/136 (38.24%), Postives = 85/136 (62.50%), Query Frame = 0
Query:   93 RVKHRIPQKRASFLLNELREEQRNGERCAL--PDLKIGDAIEVTMFANKKAARTTQARGVLVRKVNRGV--DSTILLRDVINANSVEHHIPLFSPLIQSVEVMERAFIYQGKLKGKRVRPARIYYIRNLDQKFYRI 224
            R +H+IPQKRAS L+  L+EE     +     PD   GDAIE+       A      +GV++ + N+ +  D+++LL +V +   VE  IP++SPLI+ ++V+++AFI++GK   KRVR +++YY+ +L  KFY +
Sbjct:   29 RTRHKIPQKRASNLMTILKEEGLQALKAGREWPDFSAGDAIEIHKLPYMSATVPDVIKGVVIGRFNKHMRMDASLLLLNVESGTKVERRIPIYSPLIKDIKVIQKAFIHKGK---KRVRRSKLYYLSDLHPKFYTV 161          
BLAST of mRNA_P-littoralis_Contig67.117.1 vs. uniprot
Match: A0A7S1GN95_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GN95_CYCTE)

HSP 1 Score: 93.6 bits (231), Expect = 4.490e-20
Identity = 50/138 (36.23%), Postives = 85/138 (61.59%), Query Frame = 0
Query:   95 KHRIPQKRASFLLNELREEQRNGERCALPDL-----KIGDAIEVTMFANKKA--ARTTQARGVLVRKVNRGVDSTILLRDVINANSVEHHIPLFSPLIQSVEVMERAFIYQGKLKGKRVRPARIYYIRNLDQKFYRIT 225
            K + P+KRAS L  EL  E     +   PD+     ++GD++E+ M         +  + RG+++ KVNRG+ S++++RDV+    VE  IPL+SP+++S++++ER F+++GK K KR   A++YY+R      YR+T
Sbjct:   49 KFKSPRKRASQLFEELNNEAVKKAKEEKPDVFAENPRVGDSVELEMVGEGGTLEGKLEKVRGLVIGKVNRGLASSLIVRDVVFGEPVEWKIPLYSPMVKSLKILERNFVFKGKRKVKR---AKLYYLRERSPNEYRVT 183          
BLAST of mRNA_P-littoralis_Contig67.117.1 vs. uniprot
Match: A0A6S8DEX2_9STRA (Hypothetical protein n=2 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A6S8DEX2_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 7.680e-20
Identity = 57/160 (35.62%), Postives = 88/160 (55.00%), Query Frame = 0
Query:   72 SSTDVAPAVKGLTLNVDEKVQRVK----HRIPQKRASFLLNELREE--QRNGERCALPDLKIGDAIEVTMFANKKAARTTQARGVLVRKVNRGVDSTILLRDVINANSVEHHIPLFSPLIQSVEVMERAFIYQGKLKGKRVRPARIYYIRNLDQKFYRIT 225
            S  D  P  K  T + D+KV   K    HR   KRA+ L++ L +E  Q   +   +PD K GDA+E+    N  + R    RGV + + N G+ S+  +  V++   VE+H PL+SPLI  + ++++ FI +G    K+VR A++YYIR+L    Y +T
Sbjct:  189 SPLDFTPLEKEYTPDFDKKVATRKNLWYHRKAHKRANHLIHHLNKELSQERRQHFEVPDFKGGDALEIHFQGNMASGRDNIFRGVCLARRNAGISSSFKIIGVVDEVPVEYHFPLYSPLISKIRLVKKGFIKKG---AKKVRRAKVYYIRDLPSSTYTVT 345          
BLAST of mRNA_P-littoralis_Contig67.117.1 vs. uniprot
Match: A0A7S2STI0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STI0_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 1.130e-19
Identity = 48/126 (38.10%), Postives = 78/126 (61.90%), Query Frame = 0
Query:   93 RVKHRIPQKRASFLLNELREEQRNGERCALPDLKIGDAIEVTMFANKKAARTTQARGVLVRKVNRGVDSTILLRDVINANSVEHHIPLFSPLIQSVEVMERAFIYQGKLKGKRVRPARIYYIRNLD 218
            R KH+IP K+AS L+ ELR E+        P  + GDA++VT+     A      +GV++ KVNRG DS  +L++V     +E  I  F+P++Q ++V+ +AFI++   + KRVR +++YY+R+ D
Sbjct:   53 RKKHKIPMKKASKLMQELRMERMKAVPTH-PPFRTGDAVQVTLLPYATAPSPVTHKGVVIAKVNRGPDSNFILKEVYLGEVIERRIQTFAPMVQDIKVLHKAFIHK---RDKRVRRSKLYYLRDRD 174          
BLAST of mRNA_P-littoralis_Contig67.117.1 vs. uniprot
Match: A0A3R7KLT9_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KLT9_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 5.410e-19
Identity = 56/154 (36.36%), Postives = 88/154 (57.14%), Query Frame = 0
Query:   73 STDVAPAVKGLTLNVDEKVQRVKHRIPQKRASFLLNELREEQ--RNGERCALPDLKIGDAIEVTMFANKKAARTTQARGVLVRKVNRGVDSTILLRDVINANSVEHHIPLFSPLIQSVEVMERAFIYQGKLKGKRVRPARIYYIRNLDQKFYRI 224
            STD A         V EK +  K +IP KRA+ LL +L  E   ++ E   + D K GD++EV    ++ + R  + +GV++ + NRG  S+ ++R+ I     E  I L SPL+QSV+V++ AFI++GK   KRVR A+++Y+R     F  +
Sbjct:   31 STDAA-----TMTPVVEKTKHTKLKIPTKRAASLLRQLEIEAVAKSAEGKDIDDFKPGDSVEVQYLLSRSSGRVQRVKGVVLARRNRGTGSSFVIRNHIGGYGYEQKIFLHSPLLQSVKVLQEAFIHKGK---KRVRRAKLFYLREKAPSFTTV 176          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig67.117.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKS2_ECTSI7.350e-9868.0950S ribosomal protein l19-like protein n=2 Tax=Ect... [more]
A0A835ZJ13_9STRA1.950e-3440.49Translation protein SH3-like domain-containing pro... [more]
A0A7S2P9J5_9STRA3.870e-2135.37Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
B8BTE2_THAPS4.610e-2136.8850S ribosomal protein l19-like protein n=1 Tax=Tha... [more]
A0A7R9UET9_9STRA1.210e-2035.34Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi... [more]
A0A7S3MA30_9STRA1.290e-2038.24Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S1GN95_CYCTE4.490e-2036.23Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A6S8DEX2_9STRA7.680e-2035.63Hypothetical protein n=2 Tax=Aplanochytrium stocch... [more]
A0A7S2STI0_9STRA1.130e-1938.10Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A3R7KLT9_9STRA5.410e-1936.36Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001857Ribosomal protein L19PFAMPF01245Ribosomal_L19coord: 111..224
e-value: 8.9E-25
score: 86.8
IPR001857Ribosomal protein L19PANTHERPTHR15680RIBOSOMAL PROTEIN L19coord: 44..220
IPR038657Ribosomal protein L19 superfamilyGENE3D2.30.30.790coord: 90..226
e-value: 6.0E-21
score: 76.5
NoneNo IPR availablePANTHERPTHR15680:SF939S RIBOSOMAL PROTEIN L19, MITOCHONDRIALcoord: 44..220
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILY50104Translation proteins SH3-like domaincoord: 116..225

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig67contigP-littoralis_Contig67:566248..578988 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig67.117.1mRNA_P-littoralis_Contig67.117.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig67 566248..578988 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig67.117.1 ID=prot_P-littoralis_Contig67.117.1|Name=mRNA_P-littoralis_Contig67.117.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=233bp
MLCNYVRGLAPRFACCGERGSAKINVSLAVASLPQVSQLHSAVVSAERKP
SLVGRWRSTPSSDEEHGQRRWSSTDVAPAVKGLTLNVDEKVQRVKHRIPQ
KRASFLLNELREEQRNGERCALPDLKIGDAIEVTMFANKKAARTTQARGV
LVRKVNRGVDSTILLRDVINANSVEHHIPLFSPLIQSVEVMERAFIYQGK
LKGKRVRPARIYYIRNLDQKFYRITGGGGSDN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001857Ribosomal_L19
IPR038657L19_sf
IPR008991Translation_prot_SH3-like_sf