prot_P-littoralis_Contig67.45.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig67.45.1
Unique Nameprot_P-littoralis_Contig67.45.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length311
Homology
BLAST of mRNA_P-littoralis_Contig67.45.1 vs. uniprot
Match: D7FVM6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVM6_ECTSI)

HSP 1 Score: 220 bits (560), Expect = 1.470e-66
Identity = 142/279 (50.90%), Postives = 161/279 (57.71%), Query Frame = 0
Query:   32 LLLWSRRGLAFSLPTATAAXXXXXXXXXXXXXGPDFFQHVLVEHTDQLQXXXXXXXXXXXXXAGDQPTPLVPPPHLFCIPAPGGDICLVVDEQGGYHAVRDVCPPLGVPVSQTGVVDSQVGAIGDSLLGTRFHLNDGTVRGPWCPGGGTAGPLLLRLARHRRYARLARLLVDPPRRMSWMAQRLSSSLSRQRKRERVETPLLRRPLKFGESNAATAATGLEVFAVTKQPDGSLTVVLPRLPQPLRTATGKCKAGDGGLAATAAATAVVQAKRNLAGYDY 310
            LLLW     AFS   A                  +FFQH LVE TDQL               G++ +  VPPPHLF IPAPGGD+CLVVDE+  Y+A+RD  PP GVPVSQTGVVDSQV AIGDSL GTRF+L DGTVRGPWCPGGGTAGPLLLRLARHRR+ RL    +   R ++ +   L S +S+QR R R       RP     +N  T  T LEV  VT+QPDGSLTV LPR P  L    G   A  GG  A  AA   VQ   N    D+
Sbjct:   33 LLLWIGGAYAFSAAAAAGPAAATT----------EFFQHTLVESTDQLDKLQQPRHH------GNECSGPVPPPHLFRIPAPGGDVCLVVDEKKNYYAMRDCFPPFGVPVSQTGVVDSQVDAIGDSLFGTRFNLKDGTVRGPWCPGGGTAGPLLLRLARHRRH-RLFNQCIGVARSINRLTHHLFS-ISKQR-RARGSWATYFRPPSSPNANERTTTT-LEVLTVTEQPDGSLTVALPRCPSVLAPGGGGDSAAKGGFVAAVAARGTVQEGVNPTEVDF 291          
BLAST of mRNA_P-littoralis_Contig67.45.1 vs. uniprot
Match: A0A6H5JUG0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUG0_9PHAE)

HSP 1 Score: 199 bits (507), Expect = 6.540e-59
Identity = 150/298 (50.34%), Postives = 173/298 (58.05%), Query Frame = 0
Query:   19 PPIKIPAVSYCF-LLLLWSRRGLAFSLPTATAAXXXXXXXXXXXXXGPDFFQHVLVEHTDQLQXXXXXXXXXXXXXAGDQPTPLVPPPHLFCIPAPGGDICLVVDEQGGYHAVRDVCPPLGVPVSQTGVVDSQVGAIGDSLLGTRFHLNDGTVRGPWCPGGGTAGPLLLRLARHRRYARLARLLVDPPRRMSWMAQRLSSSLSRQRKRERVETPLLRRPLKFGESNAATAATGLEVFAVTKQPDGSLTVVLPRLPQPLRTATGKCKAGDGGLAATAAAT-----AVVQAKRNLAGYDY 310
            P     A S CF +LLLW     AFS       XX             +FFQ+ LVE TDQL+XXXXXXXXXX    G++    VPPPHLF IPAPGGD+CLVVDE   Y+A+RD  PP GVPVSQTGVVDSQV AIGDSL GTRF+L DGTVRGPWCPGGGTAGPLLL LARHRR+ RL  L +   R ++ +   L     ++R R    T    RP         T  T LEV  VT+Q DGSLTV LPR    L         G+G  AA    +     +   AK +L GYD+
Sbjct:   18 PTFHPGASSLCFVILLLWVGGACAFSAAXXXXXXXPTT----------EFFQYTLVESTDQLEXXXXXXXXXX----GNEWFEPVPPPHLFRIPAPGGDVCLVVDENKSYYAMRDCFPPFGVPVSQTGVVDSQVDAIGDSLFGTRFNLEDGTVRGPWCPGGGTAGPLLLWLARHRRH-RLFTLRIGVARSINHLTHHLFLFSKQRRARGSWATSF--RPPSSPNFIEKTTTTTLEVLTVTEQLDGSLTVALPRCSSAL------APGGNGNSAANGRPSPMHNASTFAAKCDLEGYDF 292          
BLAST of mRNA_P-littoralis_Contig67.45.1 vs. uniprot
Match: A0A836CM18_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM18_9STRA)

HSP 1 Score: 101 bits (251), Expect = 4.210e-20
Identity = 50/85 (58.82%), Postives = 58/85 (68.24%), Query Frame = 0
Query:   96 DQPTPL--VPPPHLFCIPAPGGDICLVVDEQGGYHAVRDVCPPLGVPVSQTGVVDSQVGAIGDSLLGTRFHLNDGTVRGPWCPGG 178
            DQ  PL   PPP +F IP   G +CLVVDE G  HA+RD CPPLG P+S TGVVDS++G I D   GTRF+L+ G  RG  CPGG
Sbjct:  660 DQLAPLGAPPPPLVFSIPVLCGTVCLVVDENGKSHAMRDSCPPLGSPISATGVVDSEIGVIEDLRFGTRFYLSSGAPRGRLCPGG 744          
BLAST of mRNA_P-littoralis_Contig67.45.1 vs. uniprot
Match: A0A7S3ZLH5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZLH5_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 2.580e-5
Identity = 26/73 (35.62%), Postives = 37/73 (50.68%), Query Frame = 0
Query:  104 PPHLFCIPAPGGDICLVVDEQGGYHAVRDVCPPLGVPVSQTGVVDSQVGAIGDSLLGTRFHLNDGTVRGPWCP 176
            P  L C+    G + +     G  +A++   PP G+     G  D QV  I D   GT+F+++ G VRGPWCP
Sbjct:  410 PGALRCVSTKHGPLTIATTSDGAAYALQKRLPPYGLATRFYGDFDGQVRTIKDRGSGTKFYVDSGDVRGPWCP 482          
BLAST of mRNA_P-littoralis_Contig67.45.1 vs. uniprot
Match: A0A7S3ZL24_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZL24_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 3.000e-5
Identity = 26/73 (35.62%), Postives = 37/73 (50.68%), Query Frame = 0
Query:  104 PPHLFCIPAPGGDICLVVDEQGGYHAVRDVCPPLGVPVSQTGVVDSQVGAIGDSLLGTRFHLNDGTVRGPWCP 176
            P  L C+    G + +     G  +A++   PP G+     G  D QV  I D   GT+F+++ G VRGPWCP
Sbjct:  410 PGALRCVSTKHGPLTIATTSDGAAYALQKRLPPYGLATRFYGDFDGQVRTIKDRGSGTKFYVDSGDVRGPWCP 482          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig67.45.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FVM6_ECTSI1.470e-6650.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JUG0_9PHAE6.540e-5950.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CM18_9STRA4.210e-2058.82Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3ZLH5_9STRA2.580e-535.62Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3ZL24_9STRA3.000e-535.62Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 79..93
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 79..98
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilySUPERFAMILY50022ISP domaincoord: 102..180

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig67contigP-littoralis_Contig67:275641..278496 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig67.45.1mRNA_P-littoralis_Contig67.45.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig67 274213..278531 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig67.45.1 ID=prot_P-littoralis_Contig67.45.1|Name=mRNA_P-littoralis_Contig67.45.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=311bp
MIRLLWPPPWAKVAAAIFPPIKIPAVSYCFLLLLWSRRGLAFSLPTATAA
AARGKNNSNNNNDGPDFFQHVLVEHTDQLQQRRYHEHHDDGGSAGDQPTP
LVPPPHLFCIPAPGGDICLVVDEQGGYHAVRDVCPPLGVPVSQTGVVDSQ
VGAIGDSLLGTRFHLNDGTVRGPWCPGGGTAGPLLLRLARHRRYARLARL
LVDPPRRMSWMAQRLSSSLSRQRKRERVETPLLRRPLKFGESNAATAATG
LEVFAVTKQPDGSLTVVLPRLPQPLRTATGKCKAGDGGLAATAAATAVVQ
AKRNLAGYDY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036922Rieske_2Fe-2S_sf