prot_P-littoralis_Contig67.27.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig67.27.1
Unique Name	prot_P-littoralis_Contig67.27.1
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	684

Homology

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BLAST of mRNA_P-littoralis_Contig67.27.1 vs. uniprot
Match: A0A6H5JCF1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCF1_9PHAE)

HSP 1 Score: 172 bits (437), Expect = 8.710e-42
Identity = 176/382 (46.07%), Postives = 196/382 (51.31%), Query Frame = 0

Query:  341 QPSINNLWSLIPGTLEREGSRST-----------GHHNNATNGNMSNGAPGQQCIVRD--RRYAPDVHRPLSDIARRHRARALARLRARRQALAETALSS----------GRPAPVKSQSSETTDEADSHSDGRNDRHDDHQRHRSKVVVVDGGGGVARAVSXXXXXXXXXXXXXXFSGGPSSTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSKAAPGNSNA--------SKVGDLFELMRNVTMNFGT--------GGDAVNGEESLARELGKPVKYRYRQEAARSRKRTRGRFVSEKAPAFVSVTELMALRRAEREQQKNEEVSPVPVGAG 683
            +PSINNLWSLIPGTL+R+G  +                            G      D  R +APDVH PL+D+ARRHRA                               RPAP K  SSETT+E +S SDG  D  + H+ HRSKV +VDGG GV RAVS XXXXXXXXXXXXX          XXXXXXXXXXXXXXXXX                                                              P             SKVGDLF+LMRNVTM+FG          G AV+GEE+LARE GKPVKYRYRQEAARSRKRTRGRFVSEKAPAFVS+TELMALRRAERE+Q+  E +PVPVGAG
Sbjct:  362 KPSINNLWSLIPGTLKRDGGGARPXXXXXXXXXXXXXXXXXXXXXXXXXXGAGAYDHDNARWFAPDVHPPLTDMARRHRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARPAPAKRHSSETTNEPESGSDGEEDD-ELHRHHRSKVFLVDGGSGVPRAVSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKEAGVSHDVGCGGRVERAANTAEEPKTPGIAPLLTSTVVSGSGSSSSSNVDDTPVIPDPFRPSXXXXXXXXXXXXSKVGDLFQLMRNVTMSFGGDGGGGRDGAGGAVDGEENLAREPGKPVKYRYRQEAARSRKRTRGRFVSEKAPAFVSITELMALRRAERERQQKAETTPVPVGAG 742

[Close]

BLAST of mRNA_P-littoralis_Contig67.27.1 vs. uniprot
Match: D7FVM3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVM3_ECTSI)

HSP 1 Score: 144 bits (362), Expect = 2.770e-34
Identity = 79/108 (73.15%), Postives = 88/108 (81.48%), Query Frame = 0

Query:  588 ASKVGDLFELMRNVTMNFG------------TGGDAVNGEESLARELGKPVKYRYRQEAARSRKRTRGRFVSEKAPAFVSVTELMALRRAEREQQKNEEVSPVPVGAG 683
            +SKVGDLF+LMRNVTM+FG                AV+GEE+LARE GKPVKYRYRQEAARSRKRTRGRFVSEKAPAFVS+TELMALRRAERE+Q+  E +PVPVGAG
Sbjct:  234 SSKVGDLFQLMRNVTMSFGGXXXXXXXXXXXXXXGAVDGEENLAREPGKPVKYRYRQEAARSRKRTRGRFVSEKAPAFVSITELMALRRAERERQQKAETTPVPVGAG 341

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig67.27.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig67.27.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5JCF1_9PHAE	8.710e-42	46.07	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FVM3_ECTSI	2.770e-34	73.15	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 440..465
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 194..209
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 421..587
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 188..253
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..132
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 305..323
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..106
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..43
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 529..563
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 493..507
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 330..350
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..152
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 664..683
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 298..391
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 364..380

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig67	contig	P-littoralis_Contig67:173497..175752 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig67.27.1	mRNA_P-littoralis_Contig67.27.1	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig67 173497..175752 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig67.27.1 ID=prot_P-littoralis_Contig67.27.1|Name=mRNA_P-littoralis_Contig67.27.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=684bp
SAPPPAAPTSTARPIPVSPRNPEQHSRSRYWHSIQNTAAVLPSSQPPPRA
APANPYPFYPTPVASSRTRADQQQQQQQQQQQQQHLLGYFTTRNPAEVST
RPNFPVTSGGIHGWAVQQHQQHDHQQQTGPAVATAAAAPAPGPRPRQGGV
GEWRPCFDPPTMMADPRAGTAVGHVQSSPVDQWIFHQQRREQRPGIRTVQ
NSPPAPSSSPSAHDVGHPGIVLGPVPSRHSFPSGYAQKASGGRGSVDSPQ
HHIHHVVLQEQYHKYPPTAAPVVAAASSASAAAATAAAVLPASRVHHHYY
DSYEQPKQGYTQQQQQQQPRQRHQEAPKQQEVKQQQQRRQQPSINNLWSL
IPGTLEREGSRSTGHHNNATNGNMSNGAPGQQCIVRDRRYAPDVHRPLSD
IARRHRARALARLRARRQALAETALSSGRPAPVKSQSSETTDEADSHSDG
RNDRHDDHQRHRSKVVVVDGGGGVARAVSGGVSRGVSGSVPRAFSGGPSS
TAGGTSAAGAGGSEDKAAAAAATVDGSSASGEEGASPATAGSRNGSAAPE
TTITATKTTPAAPAGGNSRADDDAADNSSKAAPGNSNASKVGDLFELMRN
VTMNFGTGGDAVNGEESLARELGKPVKYRYRQEAARSRKRTRGRFVSEKA
PAFVSVTELMALRRAEREQQKNEEVSPVPVGAG*