mRNA_P-littoralis_Contig666.63.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig666.63.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 487 bits (1254), Expect = 3.000e-170 Identity = 228/273 (83.52%), Postives = 249/273 (91.21%), Query Frame = 1
Query: 4 QVLACLTILARGNCFGSIYMLSWMSSTVVQKTFHKFCKHFATEMYDDHIYLPSDGNGELDKVMGEYEKLGFPGAMGSTDVTHIAWSRCPYNQARSYTGKEGKPTVGYQVTVDHTGRVLAVTEGFTGSTNDKTIICWDAAVDQIRRDKQYTEKKFDVYKADGTTQTLEGCYLIVDNGYHKWRTLIEPTKYPITEEDIRFSGRLESVRKDVECFFGILKARFRILKLAMTYQKQERLDYVFFTCCILHNMLHTYDGMDNLEENVNWVGSAELRNT 822
+VLACLTIL RGN FGSIY LSWMS+ VQK FH+FC+HFATEMYD+HI+LPS+ NGELD+VMG+YEKLGFPGAMGSTDVTHI WSRCPYNQ RSYTGKEGKPTVGYQVTV+H GRVLAVTEGFTGSTNDKTIIC D AVD+IR DKQY EK F V+K DGTT+TL+GCYLIVDNGYHKWR LIEP+KYP++E D+ FS RLESVRKDVECFFGILK RFRILKLAMTYQKQERLDYVFFTCCILHNMLHT+DGM LEE+VNWVGSAEL+NT
Sbjct: 127 KVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQNT 399
BLAST of mRNA_P-littoralis_Contig666.63.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE) HSP 1 Score: 436 bits (1120), Expect = 7.400e-151 Identity = 201/268 (75.00%), Postives = 225/268 (83.96%), Query Frame = 1
Query: 4 QVLACLTILARGNCFGSIYMLSWMSSTVVQKTFHKFCKHFATEMYDDHIYLPSDGNGELDKVMGEYEKLGFPGAMGSTDVTHIAWSRCPYNQARSYTGKEGKPTVGYQVTVDHTGRVLAVTEGFTGSTNDKTIICWDAAVDQIRRDKQYTEKKFDVYKADGTTQTLEGCYLIVDNGYHKWRTLIEPTKYPITEEDIRFSGRLESVRKDVECFFGILKARFRILKLAMTYQKQERLDYVFFTCCILHNMLHTYDGMDNLEENVNWVGSA 807
+VLA LTIL RGNCF SIY +SWMS+ VQ FHKFCKHFA EMYD+HIYLPS+ NGELD VM +Y++LGF GAMGS DVTHI WS+CPYN ARSYTGKEG PTVGYQVTV+H GR +AVTEGFT STNDKT +CWDA V++IR D QYTEK FDVY DGTT TL+GCYL+VDNGYHKW+ L+EPTKYP++E DI FS RLESVRKDVECFFGILK FRI K+AM Y +QER+D VFFTCCILHNMLHT+DGMD L EN WV SA
Sbjct: 98 KVLAWLTILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNMLHTFDGMDQLVENTLWVSSA 365
BLAST of mRNA_P-littoralis_Contig666.63.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE) HSP 1 Score: 419 bits (1078), Expect = 9.100e-144 Identity = 200/296 (67.57%), Postives = 228/296 (77.03%), Query Frame = 1
Query: 4 QVLACLTILARGNCFGSIYMLSWMSSTVVQKTFHKFCKHFATEMYDDHIYLPSDGNGELDKVMGEYEKLGFPGAMGSTDVTHIAWSRCPYNQARSYTGKEGKPTVGYQVTVDHTGRVLAVTEGFTGSTNDKTIICWDAAVDQIRRDKQYT----------------------------EKKFDVYKADGTTQTLEGCYLIVDNGYHKWRTLIEPTKYPITEEDIRFSGRLESVRKDVECFFGILKARFRILKLAMTYQKQERLDYVFFTCCILHNMLHTYDGMDNLEENVNWVGSA 807
+VLA LTIL RGNCF SIY +SWMS+ VQ FHKFC+HFA EMYD+ I+LP++ +G+LD VM +Y++LGF GA+GS DVTHIAWSRCPYNQARSYTGKEG PT+ YQVTVDH GR +AVTEGFTGSTNDKTI+CWD AV++I DK YT EK FDVY DGTT TL+GCYL+VDNGYHKW+ LIEP+KYP++E D+ FS RLESVRKDVECFFGILK RFRILKLAM YQ QER+D VFFTC ILHNMLHT+DGMD L EN NWV SA
Sbjct: 85 KVLAWLTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNMLHTFDGMDQLVENTNWVSSA 380
BLAST of mRNA_P-littoralis_Contig666.63.1 vs. uniprot
Match: A0A6H5JUX7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX7_9PHAE) HSP 1 Score: 393 bits (1009), Expect = 6.460e-135 Identity = 185/274 (67.52%), Postives = 216/274 (78.83%), Query Frame = 1
Query: 1 LQVLACLTILARGNCFGSIYMLSWMSSTVVQKTFHKFCKHFATEMYDDHIYLPSDGNGELDKVMGEYEKLGFPGAMGSTDVTHIAWSRCPYNQARSYTGKEGKPTVGYQVTVDHTGRVLAVTEGFTGSTNDKTIICWDAAVDQIRRDKQYTEKKFDVYKADGTTQTLEGCYLIVDNGYHKWRTLIEPTKYPITEEDIRFSGRLESVRKDVECFFGILKARFRILKLAMTYQKQERLDYVFFTCCILHNMLHTYDGMDNLEENVNWVGSAELRNT 822
LQVLA LTIL +GNCF SI+ +SWMS+ VQ FHKFC+ FA EMYD+HI+LP++ +G+L VM +Y++LG CPYNQARSYTGK+ PT+ YQVTVDH R +AVTEGFTGSTNDKTI+CWDAAVD+IR DKQYTEK FD+Y DGTT TL+GCY + DNGYHKW+ LIEP+KYP++E+D+ FS RLESVRKDVECFFGILK RFRILKLAM YQ QER+D VFFTCCILHNMLHT+DGMD L EN NWV SA + T
Sbjct: 19 LQVLAWLTILGKGNCFASIFQMSWMSAKTVQGVFHKFCRLFAREMYDEHIHLPAEESGKLHHVMKQYDRLG-----------------CPYNQARSYTGKDWFPTIAYQVTVDHASRAIAVTEGFTGSTNDKTIVCWDAAVDKIRTDKQYTEKTFDLYNEDGTTTTLKGCYFLDDNGYHKWQILIEPSKYPLSEDDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTT 275
BLAST of mRNA_P-littoralis_Contig666.63.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI) HSP 1 Score: 379 bits (974), Expect = 3.740e-130 Identity = 172/230 (74.78%), Postives = 199/230 (86.52%), Query Frame = 1
Query: 133 MYDDHIYLPSDGNGELDKVMGEYEKLGFPGAMGSTDVTHIAWSRCPYNQARSYTGKEGKPTVGYQVTVDHTGRVLAVTEGFTGSTNDKTIICWDAAVDQIRRDKQYTEKKFDVYKADGTTQTLEGCYLIVDNGYHKWRTLIEPTKYPITEEDIRFSGRLESVRKDVECFFGILKARFRILKLAMTYQKQERLDYVFFTCCILHNMLHTYDGMDNLEENVNWVGSAELRNT 822
MYD+HI+LP++ +G+LD V+ +Y++LGF GAMGS DVTHIAWSRCPYNQARSYTGKEG PT+GYQVTVDH GR +AVTEGFTGSTNDKT +CWDAAV++IR DKQYTEK FDVY DGTT TL+GCY++VDNGYHKW+ LIEP+KYP++E D+ FS RLESVRKDVECFFGILK R RIL LAM +Q QER+D VFFTCCILHNMLHT+DGMD L EN NWV SA + T
Sbjct: 1 MYDEHIHLPTEESGKLDLVIEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTTVCWDAAVEKIRTDKQYTEKTFDVYNQDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRLRILMLAMAFQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTT 230
BLAST of mRNA_P-littoralis_Contig666.63.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 386 bits (991), Expect = 5.940e-130 Identity = 184/276 (66.67%), Postives = 216/276 (78.26%), Query Frame = 1
Query: 1 LQVLACLTILARGNCFGSIYMLSWMSSTVVQKTFHKFCKHFATEMYDDHIYLPSDGNGELDKVMGEYEKLGFPGAMGSTDVTHIAWSRCPYNQARSYTGKEGKPTVGYQVTVDHTGRVLAVTEGFTGSTNDKTIICWDAAVDQIRRDKQYTEKKFDVYKADGTTQTLEGCYLIVDNGYHKWRTLIEPTKYPITEEDIRFSGRLESVRKDVECFFGILKARFRILKLAMTYQKQERLDYVFFTCCILHNMLHTYDGMDNLEENVNWVGSAELRNTWE 828
L+VLACL ILARGNCF IY +S++S TFH+F ++FA EMY +HI+LP+ + KVM +Y++LGF GA GSTDVTHI W CPYNQARSYTGKEG PTV YQVTVDHT RVLAVT GFTGSTNDK+II +D AV +IR D Y+EK+F VY+ADGT L+GCYL+VDNGYHKW TLI P+KYPI + D+ FS RLESVRKDVECFFGI+K RFRILKL++ Y KQE +D VFFTCCILHNMLH+YD +EE NW G+A L N WE
Sbjct: 157 LKVLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQK--KVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWE 430
BLAST of mRNA_P-littoralis_Contig666.63.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 370 bits (950), Expect = 8.260e-125 Identity = 175/272 (64.34%), Postives = 212/272 (77.94%), Query Frame = 1
Query: 4 QVLACLTILARGNCFGSIYMLSWMSSTVVQKTFHKFCKHFATEMYDDHIYLPSDGNGELDKVMGEYEKLGFPGAMGSTDVTHIAWSRCPYNQARSYTGKEGKPTVGYQVTVDHTGRVLAVTEGFTGSTNDKTIICWDAAVDQIRRDKQYTEKKFDVYKADGTTQTLEGCYLIVDNGYHKWRTLIEPTKYPITEEDIRFSGRLESVRKDVECFFGILKARFRILKLAMTYQKQERLDYVFFTCCILHNMLHTYDGMDNLEENVNWVGSAELRN 819
QVLACL IL+RGN F IY +S++S V TFH+FCK+FA E+YD+++YLP+ +L KVM +Y+++GFPGA+GSTDVTHI W CPYNQAR YTGKEGKPTV +QVTVDH+GRVLAVT GFTG+TNDKTII +D AV +IR D YTE+K+ +Y DG +GCYL+VDNGYHKWRTLI P+K PI D+ FS RLES RKDVEC+FGILK RFRI KLA+ + KQE +D VFFTCCILHNMLH++D ++ E NW GSA L N
Sbjct: 83 QVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPT--GEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHN 352
BLAST of mRNA_P-littoralis_Contig666.63.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 370 bits (949), Expect = 2.160e-123 Identity = 175/273 (64.10%), Postives = 213/273 (78.02%), Query Frame = 1
Query: 1 LQVLACLTILARGNCFGSIYMLSWMSSTVVQKTFHKFCKHFATEMYDDHIYLPSDGNGELDKVMGEYEKLGFPGAMGSTDVTHIAWSRCPYNQARSYTGKEGKPTVGYQVTVDHTGRVLAVTEGFTGSTNDKTIICWDAAVDQIRRDKQYTEKKFDVYKADGTTQTLEGCYLIVDNGYHKWRTLIEPTKYPITEEDIRFSGRLESVRKDVECFFGILKARFRILKLAMTYQKQERLDYVFFTCCILHNMLHTYDGMDNLEENVNWVGSAELRN 819
L+VLACL IL+RGN F IY +S++S V TFH+FCK+FA E+YD+++YLP+ +L KVM +Y+++GFPGA+GSTDVTHI W CPYNQAR YTGKEGKPTV +QVTVDH+GRVLAVT GFTG+TNDKTII +D AV +IR D YTE+K+ +Y DG +GCYL+VDNGYHKWRTLI P+K PI D+ FS RLES RKDVEC+FGILK RFRI KLA+ + KQE +D VFFTCCILHNMLH++D ++ E NW GSA L N
Sbjct: 173 LKVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPT--GEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHN 443
BLAST of mRNA_P-littoralis_Contig666.63.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE) HSP 1 Score: 332 bits (852), Expect = 1.710e-110 Identity = 158/268 (58.96%), Postives = 196/268 (73.13%), Query Frame = 1
Query: 25 ILARGNCFGSIYMLSWMSSTVVQKTFHKFCKHFATEMYDDHIYLPSDGNGELDKVMGEYEKLGFPGAMGSTDVTHIAWSRCPYNQARSYTGKEGKPTVGYQVTVDHTGRVLAVTEGFTGSTNDKTIICWDAAVDQIRRDKQYTEKKFDVYKADGTTQTLEGCYLIVDNGYHKWRTLIEPTKYPITEEDIRFSGRLESVRKDVECFFGILKARFRILKLAMTYQKQERLDYVFFTCCILHNMLHTYDGMDNLEENVNWVGSAELRNTWE 828
+L +GNCF + LS MS ++ Q TFHKFC+HFA EM+D+HIYLP+ LD+VMG + +LG+ GA GSTDVTHI W+ CP+ RS+TGKEG PT+ Y VTVDH GR LAVT GFTG+TNDKTII +D+ V++IR QYTE+++ + KA+GT + GC+LIVDNGYH+W TLI P+KYP ED FS LESVRKDV CF RILKL M Y K+E +D +FFTCCILHNMLHT+DG+D EEN +W GSA + WE
Sbjct: 43 VLGKGNCFDDVEQLSKMSKSMAQPTFHKFCRHFAAEMFDEHIYLPT--GTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHEWVTLIAPSKYPQRNEDTAFSRDLESVRKDVGCF--------RILKLRMPYHKREYVDNIFFTCCILHNMLHTFDGLDVFEENTDWTGSAGHHDAWE 300
BLAST of mRNA_P-littoralis_Contig666.63.1 vs. uniprot
Match: D7FPI7_ECTSI (Transposon protein, putative, Pong sub-class n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPI7_ECTSI) HSP 1 Score: 305 bits (782), Expect = 2.250e-99 Identity = 139/194 (71.65%), Postives = 159/194 (81.96%), Query Frame = 1
Query: 4 QVLACLTILARGNCFGSIYMLSWMSSTVVQKTFHKFCKHFATEMYDDHIYLPSDGNGELDKVMGEYEKLGFPGAMGSTDVTHIAWSRCPYNQARSYTGKEGKPTVGYQVTVDHTGRVLAVTEGFTGSTNDKTIICWDAAVDQIRRDKQYTEKKFDVYKADGTTQTLEGCYLIVDNGYHKWRTLIEPTKYPITEE 585
+VLA LTIL RGNCF SIY +SWMS+ VQ FH FCKHFA EMYD+HIYLPS+ NGELD VM +Y++LGF GAMGS DVTHI W++CPYN RSYTGKEG PT+GYQVTV+H GR AVTEGFTGSTNDKTI+CWDAAV++IR DKQYTEK FDVY DGTT TL+GCYL+VDNGYHKW+ L+ + P E
Sbjct: 125 KVLAWLTILGRGNCFASIYQMSWMSAATVQAMFHMFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIVWNKCPYNLPRSYTGKEGVPTIGYQVTVNHAGRASAVTEGFTGSTNDKTIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILMGAHQVPAERE 318 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig666.63.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig666.63.1 >prot_P-littoralis_Contig666.63.1 ID=prot_P-littoralis_Contig666.63.1|Name=mRNA_P-littoralis_Contig666.63.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=276bp LQVLACLTILARGNCFGSIYMLSWMSSTVVQKTFHKFCKHFATEMYDDHIback to top mRNA from alignment at P-littoralis_Contig666:159622..160665- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig666.63.1 ID=mRNA_P-littoralis_Contig666.63.1|Name=mRNA_P-littoralis_Contig666.63.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1044bp|location=Sequence derived from alignment at P-littoralis_Contig666:159622..160665- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig666:159622..160665- >mRNA_P-littoralis_Contig666.63.1 ID=mRNA_P-littoralis_Contig666.63.1|Name=mRNA_P-littoralis_Contig666.63.1|organism=Pylaiella littoralis U1_48|type=CDS|length=828bp|location=Sequence derived from alignment at P-littoralis_Contig666:159622..160665- (Pylaiella littoralis U1_48)back to top |