prot_P-littoralis_Contig666.42.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig666.42.1
Unique Nameprot_P-littoralis_Contig666.42.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length1110
Homology
BLAST of mRNA_P-littoralis_Contig666.42.1 vs. uniprot
Match: D8LBR7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBR7_ECTSI)

HSP 1 Score: 475 bits (1222), Expect = 4.900e-148
Identity = 322/665 (48.42%), Postives = 379/665 (56.99%), Query Frame = 0
Query:  456 PGKDQPAMMPCVVPQLTADCNEGDDDSQGSALRKAIT-RXXXXXXXXXXXXXXXXXXSMCLKPKRASSSAESGHACSATLARVTTLDFKGRHSWEVSSVVVTS---RGNGSSSNTRP------GAAVAAATASIVVCHSAGVSVWDLTDAEAVCTYLSPALAGVAKEAVKGSFLAVAVVGGDPAEVTPSATRAPGGN-EACIVAIGRHGTDPGLPIIHVWQQXXXXXXXXXXXXPPLLPRGTGRVDGCKGSSSGAAAALGNADPAVATRPPSILTIALKKKFSKFFPPVVPTQVAPCLCVCGYAQPPAATMDVNAVDKRGDVEGGAT-GKHGEAGAR----ARAGDVGIITAVIALGSKVLRVVFGVGRRDSQTFRAKTLPSNVTAEAVCTSLAPVPTNPFLVCASFPSVNAVLLWNVRDQTSLFTLPLTASSILIPTMAGNGGEGGATIADSRTGSSSRPGAAAAAAGRRLDPRLLCLLATGSMDGGSNGSDHSNRRATHGTHKTACGLFGVFCTGDNDKAGKHSCGIVSAVPLEVGPAAERGESSLLRAGETDRDRKDGEHNDHSDGDAC--LRCLSDGGNGVIVGVDREGKVVARNVLTGEPQVLSTPDSATITAVTANSADGGASFATMDYDRSIGILALATAGGMDPVAAATSVHLYKLC 1102
            P + Q  + PC+VP LTAD +E D DS                                  +    SS A+  H+    +ARV TLDF G+ S  VSSVVVTS   RG GS            G+   AATASIVVCHS GVSVWDLTD+EA+CT+LSP LA  AKE V   F+A AVVGGD A  TPSATRAPGG  +ACI+A+GR GTDPG PI  VWQQ            PPL P+G GR D  + S      + G A  A A +P ++LT  +KKKFSKFFPP VP+ V PCLCVCGY+          A  +RGD  GGA  G  G  GA     AR      ITAV+ALG K LR+VFG GR  S+TF AK LP+ +  +AV TSLAPVP+NP+LVCAS P VN+VL+WNV D   LFTLP+T  S+ +P  A   G         R   ++           +  PR+LCLLATGS   G  GS      +T  T K  CGLFGV+C G +  AGKHSCG VSA+ LE    A  GE  +   GE  R R  GEH DH + DA   LRCL DGG G +VGVD  GKVVAR+VLTGE +VL  PD    TA  A +A GGA+FAT+  D    ILALATA G   VAAAT V LY+ C
Sbjct:  250 PRERQAKVGPCIVPPLTADSDERDGDSXXXXXXXXXXGESGVSDASEDVAATRGPTVPPSSENAPPSSCADGRHSWPTAIARVATLDFSGKPSLVVSSVVVTSAGSRGRGSXXXXXXXXXXXXGSVTTAATASIVVCHSGGVSVWDLTDSEAICTHLSPELASAAKELVPWRFMAAAVVGGDLAGSTPSATRAPGGGKDACIMAVGRQGTDPGSPIFRVWQQGSPSPV------PPLTPQGAGRADRRRSSGGTVGGSAGRAKEAPALQP-AVLTTTVKKKFSKFFPPAVPSHVTPCLCVCGYS---------GANGERGDGAGGAAVGDEGGPGAETSEFARE-----ITAVMALGGKALRLVFGAGRSGSETFVAKQLPARLADDAVYTSLAPVPSNPYLVCASAPLVNSVLVWNVLDLRPLFTLPITTVSVCVPLAAAAAGNAAVARGVPRVAEAAXXXXXXXXXXAKPAPRMLCLLATGSRHAG--GSSEGGVSSTRETSKVGCGLFGVYCGGGDGGAGKHSCGRVSAIRLEADAEAGAGERPVAGEGENGRSRGGGEH-DHPENDAGSGLRCLRDGGYGFVVGVDGRGKVVARSVLTGESRVLLAPD----TAAAAANAGGGATFATLGCDGDSSILALATARGPGGVAAATCVDLYEFC 886          
BLAST of mRNA_P-littoralis_Contig666.42.1 vs. uniprot
Match: A0A6H5KBZ1_9PHAE (RanBP2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBZ1_9PHAE)

HSP 1 Score: 446 bits (1146), Expect = 1.140e-134
Identity = 468/1176 (39.80%), Postives = 552/1176 (46.94%), Query Frame = 0
Query:    1 MSRAYRPRLSKDKAVAQRLQDLSVVRQISAEGTLCIPGSQATAPAAASATTXXXXXXXXXXXXXXXXXXRAAKETKAVEATPRLRGGASAGLPFTSVPIPKXXXXXXXXXXXXXXXXNLNRGSRT--------------------------AAASPGTNTLAGASPAPRAAIFQLGTSSRRRSSSRRQQRDAP----SASSDSCQDGWSCVSCSFLNLETAKKCKMCSTKNYQARRTC-SPKVAASPAPGAATATAAPSHADPQRRRQSW----------------GGPRERRSSPRRAQKETQEGVRDDKIKASVDDDLDAGRTCGSGXXXXXXXXXXXXXXXXXTPGCGITASGAGMGNVVLSPSPAEAGEAAENIPLQGREVDEGANEMMAGGAEATAPVSCEREAAADGSSDGHGYSDAREKSGTGCAGHPPRGIPSLSLPP-RKCGKKRARTPTQVSATATVATAAGDEGATSLSPVALTHPTEPTGAHSVRPPARMSPGKDQPAMMPCVVPQLTADCNEGDDDSQGSALRKAITRXXXXXXXXXXXXXXXXXXSMCLKPKRASSSAESGHACSATLARVTTLDFKGRHSWEVSSVVVTSRGNGSSSNTRPGA-------AVAAATASIVVCHSAGVSVWDLTDAEAVCTYLSPALAGVAKEAVKGSFLAVAVVGGDPAEVTPSATRAPGGNE-ACIVAIGRHGTDPGLPIIHVWQQXXXXXXXXXXXXPPLLPRGTGRVDGCKGSSSGAAAALGNADPAVATRPPSILTIALKKKFSKFFPPVVPTQVAPCLCVCGYAQPPAATMDVNAVDKRGDVEGGATGKHGEAGARARAGDVGIITAVIALGSKVLRVVFGVGRRDSQTFRAKTLPSNVTAEA-VCTSLAPVPTNPFLVCASFPSVNAVLLWNVRDQTSLFTLPLTASSILIPTMAGNGGEGGATIADSRTGSSSRPGAAAAAAGRRLD---------------PRLLCLLATGSMDGGSNGSDHSNRRATHGTHKTACGLFGVFCTGDNDKAGKHSCGIVSAVPLEVGPAAERGESSLLRAGETDRDRKDGEHNDH-SDGDACLRCLSDGGNGVIVGVDREGKVVARNVLTGEPQVLSTPDSATITAVTANSADGGASFATMDYDRSIGILALATAGGMDPVAAATSVHLYKLCD 1103
            MSR YRPRLSKDKAVAQRLQDLS   QI        P          +A  XXXXXXXXXXXXXXXXXX    ET+A +AT  L GGAS  LP  S P+P                 N +R +RT                          A A+   ++     PA  A +   G+                    S    S    W CVSCSF N+ETAKKC+MCSTK+YQA R+  SP  A   A G           D +    S+                                                           XXXXXXXXXXXXXXX  TPG  ITA GA    +  S S      AA+N P   RE D       A  A AT  V   ++ A D     +G   A+  +GT  AG    G  S   P  RK GKKRART                                PT +    PPA   P + Q  + P VVP LTAD +E +DDS                                 +    SS A+  H+  A +ARV TLDF G+ S  VSSVVVTS G+ +S                 AATASIVVCHS GVSVWDLTD+EA+CT+LSP LA  AKE V   F+A AVVGGD A  TPSATRAPGG + A I+A+GR GTDPG PI  VWQQ            PPL P+   R D  + S          A  A + +P ++LT  +KKKFSKFFPP VP+ + PCLCVCGY+          A  +RGD  GG      +      A   G ITAV+ALG K LR+VFG GR  S+TF AK LP+ +  +A V TSLAPVP+NP+LVCAS P VNAVL+WNV D   LFTLP+T  S+ +P    +   G A +A         P  A AA                     PR+LCLLATGS   G  GS  S   +T    K  CGLFGV+C G +  AGKHSCG VSA+ LE                         EH+D  +D  + LRCL D G G +VGVD  GKVVAR+VLTGE +VL  PD+A   A  AN ADG A+FA +  D    ILALATA G D VAAAT V LY+ CD
Sbjct:    1 MSRTYRPRLSKDKAVAQRLQDLSTASQIDRVLDNSTP----------AAXXXXXXXXXXXXXXXXXXXXXXGGETEADKATTWL-GGASPELPPVSTPMPTPKGF------------NNSRLNRTQTXXXXXXXXXXXXXXXXXXXXXXXXADAAGAISSXXXXXPA--APLTTRGSXXXXXXXXXXXXXXXXXXXXSRGKSSSGKSWDCVSCSFTNVETAKKCRMCSTKHYQAPRSSRSPLAAVEVAQGPGNGVGGAHDPDIRGALSSFCALAADTHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSTPGRAITAKGAEPAGLAASFSADAPVPAAKNTPSGKREGDGLKAAAAAKAAVATPTVRDGKKTAGD-----NGERGAKRTAGT--AGASQGGALSSPYPSSRKAGKKRARTXXXXXX--------XXXXXXXXXXXXXXXXXXPTESQPSPPPAGTLPQERQAKVGPWVVPLLTADSDERNDDSXXXXXXXXXXXSGVSDASEDVAATCGPTVPPSSEDAPPSSCADGRHSWPAAIARVATLDFSGKPSLAVSSVVVTSAGSRASGXXXXXXXXXXXXXVATAATASIVVCHSGGVSVWDLTDSEAICTHLSPELASAAKELVPWKFMAAAVVGGDLAGSTPSATRAPGGGKGAYIMAVGRQGTDPGSPIFRVWQQGSPSPV------PPLTPQDARRADRRRSSGXXXXXXXXRAKGAPSLQP-AVLTTTVKKKFSKFFPPAVPSHIMPCLCVCGYSV---------ANGERGDGAGGMAAGDEDGPGAGTAELAGEITAVMALGGKALRLVFGAGRSGSETFVAKQLPTKLADDAAVYTSLAPVPSNPYLVCASAPLVNAVLVWNVLDLRPLFTLPITTVSVCVP--LASAAVGNAAVARGV------PMVAEAAXXXXXXXXXXXXXXXXXXKPAPRMLCLLATGSRHAG--GSSESGVSSTREKSKVVCGLFGVYCGGGDGGAGKHSCGRVSAIRLEADXXXXXXXXXXXXXXXXXXXXXXXEHDDRENDAGSGLRCLCDSGYGFVVGVDGRGKVVARSVLTGESRVLLAPDTA---AAEAN-ADGRATFAALGCDEDSSILALATARGPDGVAAATCVDLYEFCD 1106          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig666.42.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LBR7_ECTSI4.900e-14848.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KBZ1_9PHAE1.140e-13439.80RanBP2-type domain-containing protein n=1 Tax=Ecto... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 409..425
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 89..170
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 286..306
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 36..65
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 980..1004
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 666..690
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 213..273
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 352..430
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 43..58
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 236..273
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 666..681
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 98..136
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 987..1004
IPR001876Zinc finger, RanBP2-typePROSITEPS01358ZF_RANBP2_1coord: 178..197
IPR011047Quinoprotein alcohol dehydrogenase-like superfamilySUPERFAMILY50998Quinoprotein alcohol dehydrogenase-likecoord: 587..1083

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig666contigP-littoralis_Contig666:110271..115470 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig666.42.1mRNA_P-littoralis_Contig666.42.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig666 110271..115470 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig666.42.1 ID=prot_P-littoralis_Contig666.42.1|Name=mRNA_P-littoralis_Contig666.42.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1110bp
MSRAYRPRLSKDKAVAQRLQDLSVVRQISAEGTLCIPGSQATAPAAASAT
TTGATGATEAAPGATEAAARAAKETKAVEATPRLRGGASAGLPFTSVPIP
KSKSSGSSNSSSFSRTKNLNRGSRTAAASPGTNTLAGASPAPRAAIFQLG
TSSRRRSSSRRQQRDAPSASSDSCQDGWSCVSCSFLNLETAKKCKMCSTK
NYQARRTCSPKVAASPAPGAATATAAPSHADPQRRRQSWGGPRERRSSPR
RAQKETQEGVRDDKIKASVDDDLDAGRTCGSGGGGYGNGAAPRKRRRNST
PGCGITASGAGMGNVVLSPSPAEAGEAAENIPLQGREVDEGANEMMAGGA
EATAPVSCEREAAADGSSDGHGYSDAREKSGTGCAGHPPRGIPSLSLPPR
KCGKKRARTPTQVSATATVATAAGDEGATSLSPVALTHPTEPTGAHSVRP
PARMSPGKDQPAMMPCVVPQLTADCNEGDDDSQGSALRKAITRRRSAAAE
VVTPSCSSSAASMCLKPKRASSSAESGHACSATLARVTTLDFKGRHSWEV
SSVVVTSRGNGSSSNTRPGAAVAAATASIVVCHSAGVSVWDLTDAEAVCT
YLSPALAGVAKEAVKGSFLAVAVVGGDPAEVTPSATRAPGGNEACIVAIG
RHGTDPGLPIIHVWQQQQQQQQQQQGSSPPLLPRGTGRVDGCKGSSSGAA
AALGNADPAVATRPPSILTIALKKKFSKFFPPVVPTQVAPCLCVCGYAQP
PAATMDVNAVDKRGDVEGGATGKHGEAGARARAGDVGIITAVIALGSKVL
RVVFGVGRRDSQTFRAKTLPSNVTAEAVCTSLAPVPTNPFLVCASFPSVN
AVLLWNVRDQTSLFTLPLTASSILIPTMAGNGGEGGATIADSRTGSSSRP
GAAAAAAGRRLDPRLLCLLATGSMDGGSNGSDHSNRRATHGTHKTACGLF
GVFCTGDNDKAGKHSCGIVSAVPLEVGPAAERGESSLLRAGETDRDRKDG
EHNDHSDGDACLRCLSDGGNGVIVGVDREGKVVARNVLTGEPQVLSTPDS
ATITAVTANSADGGASFATMDYDRSIGILALATAGGMDPVAAATSVHLYK
LCDDTELPT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001876Znf_RanBP2
IPR011047Quinoprotein_ADH-like_supfam