prot_P-littoralis_Contig666.32.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig666.32.1
Unique Nameprot_P-littoralis_Contig666.32.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length159
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig666.32.1 vs. uniprot
Match: D8LBS1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBS1_ECTSI)

HSP 1 Score: 131 bits (330), Expect = 1.370e-35
Identity = 63/86 (73.26%), Postives = 70/86 (81.40%), Query Frame = 0 
Query:    2 EQEGFGEDSDDELSAMAWAVAIRGKSGREIAQLHESWSESLLARGFFGQAQEHLDQALQAWTSYDEPVLMARAWCLKASCSGEAGE 87
            E + F ED D ELSAMAW  AIRGKSGREIA LH+SW+ + LARG F +AQEHLD AL+AWT YDEP L ARAWCLKASCSGEAG+
Sbjct:    3 EHQDFEEDDDGELSAMAWESAIRGKSGREIAHLHQSWAAAFLARGSFNKAQEHLDHALEAWTGYDEPGLQARAWCLKASCSGEAGD 88
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig666.32.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LBS1_ECTSI1.370e-3573.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 15..156
e-value: 2.3E-8
score: 35.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 26..147

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig666contigP-littoralis_Contig666:94672..96692 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig666.32.1mRNA_P-littoralis_Contig666.32.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig666 94531..96695 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig666.32.1 ID=prot_P-littoralis_Contig666.32.1|Name=mRNA_P-littoralis_Contig666.32.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=159bp
MEQEGFGEDSDDELSAMAWAVAIRGKSGREIAQLHESWSESLLARGFFGQ
AQEHLDQALQAWTSYDEPVLMARAWCLKASCSGEAGEFSAAAASFKAAQK
LAESAGDVSLVLCILINRAICEIRLGDCKAAATRSRRAFVRAEAEGDPEM
TLKTLCVR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf