prot_P-littoralis_Contig658.9.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig658.9.1
Unique Nameprot_P-littoralis_Contig658.9.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length63
Homology
BLAST of mRNA_P-littoralis_Contig658.9.1 vs. uniprot
Match: A0A6H5JA56_9PHAE (DDE_Tnp_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA56_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 6.240e-21
Identity = 48/61 (78.69%), Postives = 51/61 (83.61%), Query Frame = 0
Query:    2 KLFRFGRHRATQSTLAKIADKYMGKVGAACRVMLFGKASFRTQKGRAFAPRKAMVREMANR 62
            K  RF R RATQ TLAKIADKYMG VG  CRVMLFGKASFR QKGRA APRKA++REMA+R
Sbjct:  656 KFLRFDRFRATQKTLAKIADKYMGHVGDPCRVMLFGKASFRAQKGRASAPRKALIREMASR 716          
BLAST of mRNA_P-littoralis_Contig658.9.1 vs. uniprot
Match: UPI0000161E54 (EsV-1-178/222 paralog 2 n=2 Tax=Ectocarpus siliculosus virus 1 TaxID=37665 RepID=UPI0000161E54)

HSP 1 Score: 88.6 bits (218), Expect = 4.880e-19
Identity = 46/61 (75.41%), Postives = 49/61 (80.33%), Query Frame = 0
Query:    2 KLFRFGRHRATQSTLAKIADKYMGKVGAACRVMLFGKASFRTQKGRAFAPRKAMVREMANR 62
            K  RF R RATQ TLA IADKYMG V   CRVMLFGKASFR QKGRA APRKA++REMA+R
Sbjct:  617 KFMRFDRFRATQKTLALIADKYMGHVEDTCRVMLFGKASFRAQKGRASAPRKALIREMASR 677          
BLAST of mRNA_P-littoralis_Contig658.9.1 vs. uniprot
Match: Q6XLT6_9PHYC (FirrV-1-M1 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XLT6_9PHYC)

HSP 1 Score: 87.4 bits (215), Expect = 1.240e-18
Identity = 43/61 (70.49%), Postives = 50/61 (81.97%), Query Frame = 0
Query:    2 KLFRFGRHRATQSTLAKIADKYMGKVGAACRVMLFGKASFRTQKGRAFAPRKAMVREMANR 62
            +  RFGRHRATQS LA+IAD++MG VG  CRVMLFGKASF  +KGRA APRK ++REMA R
Sbjct:  626 RFLRFGRHRATQSILARIADRFMGHVGDICRVMLFGKASFSAKKGRASAPRKRLIREMAAR 686          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig658.9.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JA56_9PHAE6.240e-2178.69DDE_Tnp_1 domain-containing protein n=1 Tax=Ectoca... [more]
UPI0000161E544.880e-1975.41EsV-1-178/222 paralog 2 n=2 Tax=Ectocarpus silicul... [more]
Q6XLT6_9PHYC1.240e-1870.49FirrV-1-M1 n=1 Tax=Feldmannia irregularis virus a ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig658contigP-littoralis_Contig658:57506..57694 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig658.9.1mRNA_P-littoralis_Contig658.9.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig658 57237..57757 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig658.9.1 ID=prot_P-littoralis_Contig658.9.1|Name=mRNA_P-littoralis_Contig658.9.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=63bp
MKLFRFGRHRATQSTLAKIADKYMGKVGAACRVMLFGKASFRTQKGRAFA
PRKAMVREMANR*
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