mRNA_P-littoralis_Contig655.1.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig655.1.1
Unique NamemRNA_P-littoralis_Contig655.1.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig655.1.1 vs. uniprot
Match: A0A6H5JY17_9PHAE (SWIM-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY17_9PHAE)

HSP 1 Score: 173 bits (438), Expect = 1.230e-43
Identity = 127/360 (35.28%), Postives = 173/360 (48.06%), Query Frame = 1
Query:  505 GILEQVVLSDADIANTSAVRNCWQTTLHLFCLWHVFKNVLKNCAKACPDADQRAEILRLFRSAAYAATPEAFLSHRANLERIVEDTSCEKYIADLIAEFLPNFSATQQLVFRANVRIVWEA*QMPHISSSQRRRLWALNVFP-VATKGQIQVGVLLAADGCHPRHGXXXARGRFVFGGKKIGG*EEAVTLRSLGSPPRCDPDAGDRAQQVRNPSRYCPKAFPGEPP------AGVFQPHQTRARAHWRQPILPQGTQTRIG--RIAVVELMGAGSADDGGYPLPLAHNFLSETIGGCRGRVNAFEEAPADIDLDQDIKLGPDAPSTKESSAWARASLTAFLALIANVPINLVAAVRYNLT 1557
            G   +V+L+DAD A TSA+   W TTLHLFCLWHVFKNVLKNC+ + PD ++RA++LRLFRSAAYAATPEAF  +R +LE+IV+   CE+Y+  LI                                  Q +  WA +  P + T G +                    R   +FG  K  G  + ++L  L    +      D        SR   +    E P       G+F P Q   +            +  +G  +   VE++ AG+ DD G P PL    L   +   R  ++ FEEA  D DL++D   GP+A ST++SS WAR SL A L LI  +P+++ AAVRY LT
Sbjct:   39 GRRPKVMLTDADRAMTSALEE-WTTTLHLFCLWHVFKNVLKNCSSSFPDKEERAKMLRLFRSAAYAATPEAFARYRVDLEKIVKGKKCEEYMDALI----------------------------------QDKTKWAFSCRPTLLTMGMVAT-----------------QRTEGMFGVAKRSGVHKKLSLCGLWEKLQLMYQKMDVEY-----SRVATRGVGAELPFQTKHLQGIFAPIQEELKRVGASQYCQVEARAEVGGSQSYDVEVICAGATDDDGRPDPLGEGVLRRKLEAVRFDLSLFEEAKPDTDLEKDCMRGPEAESTEDSSVWARTSLEALLDLIGELPVHVAAAVRYKLT 341          
BLAST of mRNA_P-littoralis_Contig655.1.1 vs. uniprot
Match: A0A6H5KWM8_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWM8_9PHAE)

HSP 1 Score: 172 bits (435), Expect = 9.890e-43
Identity = 140/448 (31.25%), Postives = 199/448 (44.42%), Query Frame = 1
Query:  352 SDFLSTLQREPGMFVERTFDSFGRLVNVFWATVDQQDKMGEIQGL------------------------------------HPARHHGILEQVVLSDADIANTSAVRNCWQTTLHLFCLWHVFKNVLKNCAKACPDADQRAEILRLFRSAAYAATPEAFLSHRANLERIVEDTSCEKYIADLIAEFLPNFSATQQLVFRANVRIVWEA*QMPHISSSQRRRLWALNVFP-VATKGQIQVGVLLAADGCHPRHGXXXARGRFVFGGKKIGG*EEAVTLRSLGSPPRCDPDAGDRAQQVRN--PSRYCPKAFPGEPPAGVFQP-HQTRARAHWRQPILPQGTQTRIGRIAV-----VELMGAGSADDGGYPLPLAHNFLSETIGGCRGRVNAFEEAPADIDLDQDIKLGPDAPSTKESSAWARASLTAFLALIANVPINLVAAVRYNLTA 1560
            +DFL++L+ EPGM+ + T D+ GRLV+VFW+T++QQ  +    G                                     +     G   +V+L+DAD+A T+A+ +CW  TLHL CLWH+FKNV KNC+ + PD D + ++LR FR AAYAATPEAF +  A L+ +V    CE Y+ DLI                                    +  WA    P V T G +                    R   +FG  K  G E+ ++L +L           DR Q V           A P   P   F+  H        +Q +L  G      ++       VEL+ +G+ D+ G PLPL H+     I   R ++N  + AP D DL++D     D P+ ++++ WA  SL AFL L+A  PI LVAAVRY  +A
Sbjct:  187 TDFLASLKSEPGMYCDHTLDAQGRLVDVFWSTIEQQAHIARFGGCIQLDTTVFTNSACFCAFWGRDCCGQCTQTFERMLNRYETAAGGRRPKVILTDADLAMTAAIASCWPDTLHLHCLWHIFKNVRKNCSSSFPDNDAKTDMLRTFRRAAYAATPEAFATQAARLKTLVAGKKCEDYMTDLITN----------------------------------KTKWAFCWRPTVVTLGMVAT-----------------QRTEGLFGVAKRSGVEKKLSLCAL----------WDRLQHVSKMIAIETARLATPLITPGVAFRDKHVEEFFQPVKQELLACGASQYCQKVDGSESYDVELVTSGNVDEDGQPLPL-HDDDFVQIRNLRLKLNILQVAPPDTDLERDSLA--DEPA-EDNTMWACTSLLAFLELVAGFPIELVAAVRYKYSA 569          
BLAST of mRNA_P-littoralis_Contig655.1.1 vs. uniprot
Match: A0A6H5JZB4_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZB4_9PHAE)

HSP 1 Score: 169 bits (429), Expect = 2.260e-41
Identity = 158/546 (28.94%), Postives = 232/546 (42.49%), Query Frame = 1
Query:  184 VLPLSVVERRMDDLRRWTPADTKRQRSSNCSGWTTTGRCYVKSANGR----------RVVLQSRAGSDFLSTLQREPGMFVERTFDSFGRLVNVFWATVDQQDKMGE---------------------IQGLHPARHHGILEQ----------------------------VVLSDADIANTSAVRNCWQTTLHLFCLWHVFKNVLKNCAKACPDADQRAEILRLFRSAAYAATPEAFLS-----------------HRANLERIVEDT--SCEKYIAD-----LIAEFLPN--FSATQQL--VFRANVRIVWEA*QMPHISSSQRRRLWALNVFPVATKGQIQVGVLLAADGCHPRHGXXXARGRFVFGGKKIGG*EEAVTLRSLGSPPRCDPDAGDRAQQVRNPSRYCPKAFPGEPPAGVFQPHQTRARAHWRQPILPQGTQTRIGRIAV-VELMGAGSADDGGYPLPLAHNFLSETIGGCRGRVNAFEEAPADIDLDQDIKLGPDAPSTKESSAWARASLTAFLALIANVPINLVAAVRYNLT 1557
             LP +VV+ R DD+R+WT A  K             G C  K    +           +      G++FL+ L+ EPGMFV+RTFDS GR+V+VFWATVDQQDKM                       I G+       +L Q                            V+L+DAD A  +A+R  W+T +HL+ LWH+ K+V+K+C+    D   R ++LRLFR+AAYAATPE  L+                 H   L  + +D    C  + +D      +     N  ++AT +    +RA++        +   +S      WA +  P A    + +G++               R   +FG  K  G  + ++L +L           DR Q V                      +QT    H  Q    +      G  +  VE++  G+ADD G+P+PL  + L + +       N  EE P D DL+ D KL P+A ST++++ WAR SL A L L + VP++L AAV Y LT
Sbjct:  296 ALPPTVVDERFDDVRKWTTAGVKPTDMFKLLKMHYDGLCLAKDEKKKVYNAIKKIQNELYSTPEDGANFLAKLEAEPGMFVKRTFDSLGRIVDVFWATVDQQDKMAATGCMQMDTTVFTDRYGCPLLFIVGVDDENRTCVLGQGVLRSESTETFKWFLDSYEEAAGGRRPKVMLTDADQAMAAALRE-WKTIVHLWYLWHLNKDVVKHCSSFFSDPRTREKMLRLFRNAAYAATPEVMLTDADQAMAAALREWKTIVHLWYLWHLNKDVVKHCSSFFSDPRTREKMLRLFRNAAYAATPEAFAAYRADLERT-----VATSTSGTFSTKWAFSCRPTA----LTLGMVATK------------RTEGMFGVAKKSGIHKKLSLCAL----------WDRLQHV----------------------YQTMDIEHGSQYCQLEAKDELGGSQSYDVEVICVGAADDEGHPVPLEGDVLRQQLEAAHFDFNLCEEGPPDTDLEIDCKLDPEAESTEDNTVWARTSLEALLDLFSRVPVHLAAAVPYKLT 787          
BLAST of mRNA_P-littoralis_Contig655.1.1 vs. uniprot
Match: A0A6H5L3G4_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3G4_9PHAE)

HSP 1 Score: 148 bits (374), Expect = 5.980e-35
Identity = 95/253 (37.55%), Postives = 128/253 (50.59%), Query Frame = 1
Query:  184 VLPLSVVERRMDDLRRWTPADTKRQRSSNCSGWTTTGRCYVKSANGRRVVLQSRAGSDFLSTLQREPGMFVERTFDSFGRLVNVFWATVDQQDKMGEIQG-------LHPARH--------------------HGILE-----------------------QVVLSDADIANTSAVRNCWQTTLHLFCLWHVFKNVLKNCAKACPDADQRAEILRLFRSAAYAATPEAFLSHRANLERIVEDTSCEKYIADLI 792
            VLP ++V+ R DD+R+WT A  K   +         G C  K               D    L+ EPGMFV+RTFDS GR+V+VFWATVDQQDKM    G       +   RH                     G+L                        +V+L+D D A  SA+R  W+TT+HL CLWH+ K+V+K+C+ +  D   R ++LRLFR+AA+AATPE F  +RA+LER V    C++YI DL+
Sbjct:  305 VLPPTMVDERFDDVRKWTAAGVKPTDTFKLLEMDYDGLCLAK---------------DGKKKLEAEPGMFVKRTFDSLGRIVDVFWATVDQQDKMATFGGCIQMETTVFTNRHGCPLLFIVGVDDENRTCVLGQGMLRSESTESFKWFVDSYEKAAGGRRPKVMLTDTDQAMASALRE-WKTTVHLRCLWHLNKSVVKHCSSSFSDTKTREKMLRLFRNAAHAATPEIFAKYRADLERTVGGKKCDQYIRDLL 541          
BLAST of mRNA_P-littoralis_Contig655.1.1 vs. uniprot
Match: A0A6H5L618_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L618_9PHAE)

HSP 1 Score: 149 bits (377), Expect = 9.930e-35
Identity = 90/197 (45.69%), Postives = 109/197 (55.33%), Query Frame = 1
Query:  352 SDFLSTLQREPGMFVERTFDSFGRLVNVFWATVDQQDKMGE----------------------IQGLHPARHHGILEQ----------------------------VVLSDADIANTSAVRNCWQTTLHLFCLWHVFKNVLKNCAKACPDADQRAEILRLFRSAAYAATPEAFLSHRANLERIVEDTSCEKYIADLI 792
            ++FL+TLQ EPGMFVER FDS GRL NVFWATVDQQ+K+                        I G+       IL Q                            V L+D + A T+A+R  W+TTLHL+CLWH+FKNVLKNCA + PDAD+R  +L LFRSA Y ATPEAF  H A+LER +    C KY+ DLI
Sbjct:   35 ANFLATLQSEPGMFVEREFDSIGRLENVFWATVDQQNKIARYGACIQMDTTVFMNRYGCPLLFIVGVDDENRSCILAQCLLRSECTETFKWILTSWDGASGDRRPKVFLTDGEKAMTAALRG-WKTTLHLYCLWHIFKNVLKNCASSFPDADERKGMLGLFRSATY-ATPEAFNKHSADLERTIAGKECAKYMQDLI 229          
BLAST of mRNA_P-littoralis_Contig655.1.1 vs. uniprot
Match: A0A6H5JXC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXC0_9PHAE)

HSP 1 Score: 145 bits (365), Expect = 5.720e-34
Identity = 67/114 (58.77%), Postives = 89/114 (78.07%), Query Frame = 2
Query:  944 DKSKWAFSLRPTVVTLGMVATQRVDGLFSVAKKSGVEKKLSLCALWDRLQGVIQMLEIEHSRLGTPAVTAPKLFQENHLQAFFNPIKQELERIGASQYCHRELRPELGGSQSWN 1285
            +K+KWAF  RPTV+TLGMVATQR +GLF VAK+SGVEKKLSLCALWDRLQ + +M+ IE +RL TP +T    F++  ++ FF P+KQEL   GASQYC +E+R ++ G +S++
Sbjct:  128 NKTKWAFCCRPTVLTLGMVATQRTEGLFGVAKRSGVEKKLSLCALWDRLQHLSKMIAIETARLATPPITPGVAFRDKLVEEFFQPVKQELLACGASQYCQKEIRAQVDGLESYD 241          
BLAST of mRNA_P-littoralis_Contig655.1.1 vs. uniprot
Match: A0A6H5L2H3_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2H3_9PHAE)

HSP 1 Score: 144 bits (362), Expect = 1.930e-33
Identity = 108/331 (32.63%), Postives = 160/331 (48.34%), Query Frame = 1
Query:  571 WQTTLHLFCLWHVFKNVLKNCAKACPDADQRAEILRLFRSAAYAATPEAFLSHRANLERIVEDTSCEKYIADLIAEFLPNFSATQQLVFRANVRIVWEA*QMPHISSSQRRRLWALNVFPVATKGQIQVGVLLAADGCHPRHGXXXARGRFVFGGKKIGG*EEAVTLRSLGSPPRCDPDAGDRAQQVRNPSRYCPKAFPGEPPAGVFQPHQTRARAHWRQPILPQGTQTRIG--RIAVVELMGAGSADDGGYPLPLAHNFLSETIGGCRGRVNAFEEAPADIDLDQDIKLGPDAPSTKESSAWARASLTAFLALIANVPINLVAAVRYNLT 1557
            W+TT+HL+CLWH+ KNV+++C+ +  D   R ++LRLFR+AA+AATPEAF ++RA+LER V    C++YI DL+        A + L+  +     W     P  +  QR R WA                      C PR        R   G +K  G     T   L +      +   R   +         AF  +   G   P +    +           +  +G  +   VE++  G+ADD G+P+PL    L + +       N +EEAP D D++ D KLGP+A ST++++ WAR SL A L L++ VP++L AAVRY LT
Sbjct:    8 WKTTVHLWCLWHLNKNVVQHCSSSFSDTKTREKMLRLFRNAAHAATPEAFSTYRADLERTVRGKKCDQYIRDLLD------GARKMLI--SCWCCEWRKRSGPSPAGRQRSR-WA----------------------CLPRSAP-----RACSGWRKSSG----YTRSCLCALCETASNMCTRQWTLSTAVVKAELAFQTKHLEGFLAPIREELESVGASQYCQLEAKDELGGSQSYDVEVICVGAADDKGHPVPLEGGVLRQQLEAAHFDFNLYEEAPPDTDMEIDCKLGPEAESTEDNTVWARTSLEAPLDLVSRVPVHLAAAVRYKLT 298          
BLAST of mRNA_P-littoralis_Contig655.1.1 vs. uniprot
Match: A0A6H5KG54_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG54_9PHAE)

HSP 1 Score: 144 bits (363), Expect = 6.720e-33
Identity = 110/312 (35.26%), Postives = 143/312 (45.83%), Query Frame = 1
Query:   40 EIVCKRRGKPR-KDAPGSTDKKLRKSSSKQSNCD----------------------HNHDPRGAVSSVEQDVLPLSVVERRMDDLRRWTPADTKRQRSSNCSGWTTTGRCYVKSANGRRVVLQSRA------------GSDFLSTLQREPGMFVERTFDSFGRLVNVFWATVDQQDKMGEIQGLHP------ARHHG----------------ILEQ------------------------------VVLSDADIANTSAVRNCWQTTLHLFCLWHVFKNVLKNCAKACPDADQRAEILRLFRSAAYAATPE 714
            EI+CK  G PR K+   +  KK R+  S++  C                       HNHDPRGAVS  ++ VLPLS ++ RMDD+R+WT A+   Q            R   +   G++ V    A             ++FL+TL+ +PGM+V  TFD  GRLVNVFWAT DQQ++     G         A  +G                IL Q                              V+L+DAD+A TSAV + W+ T HLFCLWHV KN++K CA A  D D R  +LR FRSAAYA   E
Sbjct:  128 EILCKHNGSPRFKEYVPTAGKKNRERRSQRVGCPFKVGIYWRSGTLTPAVTQADLRHNHDPRGAVSKAQEKVLPLSFIDDRMDDIRKWTAANLGAQEIFKLLHADGENRLLCR--QGKKKVWNFMAKVQEELYCSPEDAANFLATLRSDPGMYVANTFDDPGRLVNVFWATADQQERAARFGGCIQMDTTVFANRYGCPVLLFVGVDDENRSCILGQGLLRSECAETFEWFLTQYESAAGGWERRPKVILTDADVAMTSAVPSVWKGTQHLFCLWHVNKNLVKKCAGALSDHD-RTRMLRSFRSAAYAVNAE 436          
BLAST of mRNA_P-littoralis_Contig655.1.1 vs. uniprot
Match: A0A6H5KK72_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK72_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 4.890e-32
Identity = 73/133 (54.89%), Postives = 89/133 (66.92%), Query Frame = 1
Query:  352 SDFLSTLQREPGMFVERTFDSFGRLVNVFWATVDQQDKMGEIQG--------LHPARHHGIL----EQVVLSDADIANTSAVRNCWQTTLHLFCLWHVFKNVLKNCAKACPDADQRAEILRLFRSAAYAATPE 714
            ++FL+TLQ EPGMFVER  DS GRL NVFWATVDQQ+K+                +R  G       +V L+D D A T+A+R  W+TTLHL+CLWH+ KNV KNCA + PDAD+R  +L LFRS AYAATPE
Sbjct:   35 ANFLATLQSEPGMFVERELDSIGRLENVFWATVDQQNKIARYGACIQMGTMVFTNSRXDGASGDRRPKVFLTDGDKAMTAALRG-WKTTLHLYCLWHILKNV-KNCASSFPDADERKRMLGLFRSVAYAATPE 165          
BLAST of mRNA_P-littoralis_Contig655.1.1 vs. uniprot
Match: A0A6H5K7Y9_9PHAE (SWIM-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Y9_9PHAE)

HSP 1 Score: 138 bits (347), Expect = 1.420e-31
Identity = 69/115 (60.00%), Postives = 87/115 (75.65%), Query Frame = 2
Query:  941 RDKSKWAFSLRPTVVTLGMVATQRVDGLFSVAKKSGVEKKLSLCALWDRLQGVIQMLEIEHSRLGTPAVTAPKLFQENHLQAFFNPIKQELERIGASQYCHRELRPELGGSQSWN 1285
            ++KSKWAF  R T + LGM ATQRV+GLFSVAK+ GV K+LSLCALWD L+ V   L IE   L TPA+ A   FQE H++ FF PIK+ L+R+GASQ+C R++R ELGGSQS++
Sbjct:   19 KNKSKWAFYCRTTTLALGMAATQRVEGLFSVAKRMGVIKQLSLCALWDVLRRVDTSLAIE---LATPAIAAQLPFQEKHMENFFTPIKEGLQRVGASQFCTRDVRRELGGSQSYD 130          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig655.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JY17_9PHAE1.230e-4335.28SWIM-type domain-containing protein n=3 Tax=Ectoca... [more]
A0A6H5KWM8_9PHAE9.890e-4331.25MULE domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JZB4_9PHAE2.260e-4128.94SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5L3G4_9PHAE5.980e-3537.55MULE domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5L618_9PHAE9.930e-3545.69MULE domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JXC0_9PHAE5.720e-3458.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L2H3_9PHAE1.930e-3332.63SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KG54_9PHAE6.720e-3335.26SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KK72_9PHAE4.890e-3254.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K7Y9_9PHAE1.420e-3160.00SWIM-type domain-containing protein n=2 Tax=Ectoca... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig655contigP-littoralis_Contig655:13355..17232 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7FLF6
PFAMsMULE
Model size1566
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons8
Evalue1.56e-06
EggNOG OGs2CMGX@1|root,2QQB8@2759|Eukaryota
Cds size870
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig655.1.1prot_P-littoralis_Contig655.1.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig655 13355..16042 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791368.0930996-CDS-P-littoralis_Contig655:13354..133751680791368.0930996-CDS-P-littoralis_Contig655:13354..13375Pylaiella littoralis U1_48CDSP-littoralis_Contig655 13355..13375 +
1680791368.108141-CDS-P-littoralis_Contig655:13556..136611680791368.108141-CDS-P-littoralis_Contig655:13556..13661Pylaiella littoralis U1_48CDSP-littoralis_Contig655 13557..13661 +
1680791368.1245632-CDS-P-littoralis_Contig655:14221..144181680791368.1245632-CDS-P-littoralis_Contig655:14221..14418Pylaiella littoralis U1_48CDSP-littoralis_Contig655 14222..14418 +
1680791368.136996-CDS-P-littoralis_Contig655:14722..149181680791368.136996-CDS-P-littoralis_Contig655:14722..14918Pylaiella littoralis U1_48CDSP-littoralis_Contig655 14723..14918 +
1680791368.1467648-CDS-P-littoralis_Contig655:15517..157121680791368.1467648-CDS-P-littoralis_Contig655:15517..15712Pylaiella littoralis U1_48CDSP-littoralis_Contig655 15518..15712 +
1680791368.1565278-CDS-P-littoralis_Contig655:15886..160421680791368.1565278-CDS-P-littoralis_Contig655:15886..16042Pylaiella littoralis U1_48CDSP-littoralis_Contig655 15887..16042 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791368.1705093-UTR-P-littoralis_Contig655:16042..163001680791368.1705093-UTR-P-littoralis_Contig655:16042..16300Pylaiella littoralis U1_48UTRP-littoralis_Contig655 16043..16300 +
1680791368.1903684-UTR-P-littoralis_Contig655:16583..167011680791368.1903684-UTR-P-littoralis_Contig655:16583..16701Pylaiella littoralis U1_48UTRP-littoralis_Contig655 16584..16701 +
1680791368.2071755-UTR-P-littoralis_Contig655:16913..172321680791368.2071755-UTR-P-littoralis_Contig655:16913..17232Pylaiella littoralis U1_48UTRP-littoralis_Contig655 16914..17232 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig655.1.1

>prot_P-littoralis_Contig655.1.1 ID=prot_P-littoralis_Contig655.1.1|Name=mRNA_P-littoralis_Contig655.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=290bp
RHRRVKTRRYRHREIVCKRRGKPRKDAPGSTDKKLRKSSSKQSNCDHNHD
PRGAVSSVEQDVLPLSVVERRMDDLRRWTPADTKRQRSSNCSGWTTTGRC
YVKSANGRRVVLQSRAGSDFLSTLQREPGMFVERTFDSFGRLVNVFWATV
DQQDKMGEIQGLHPARHHGILEQVVLSDADIANTSAVRNCWQTTLHLFCL
WHVFKNVLKNCAKACPDADQRAEILRLFRSAAYAATPEAFLSHRANLERI
VEDTSCEKYIADLIAEFLPNFSATQQLVFRANVRIVWEA*
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mRNA from alignment at P-littoralis_Contig655:13355..17232+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig655.1.1 ID=mRNA_P-littoralis_Contig655.1.1|Name=mRNA_P-littoralis_Contig655.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3878bp|location=Sequence derived from alignment at P-littoralis_Contig655:13355..17232+ (Pylaiella littoralis U1_48)
CGCCATAGGAGAGTCAAGACGGTGAGGCCAGCCGTCAGTGTCTCGTGAGG CTTCCATTTCTTGCGCGTTCCTCGAAACGTTATGCTGTGGCTGTGCCTGC CGCTAGCCAAACGTGTGATGTGAGTCGAGGCCACCATGATACTTGTTCTT CTCTTTGTCCCCTCCCTCCGACCCATGTACGTATGTGCGGACGGCGGATA AGAGGAGATACAGGCATCGCGAAATCGTCTGCAAGCGCAGGGGGAAGCCG CGGAAGGATGCACCGGGAAGCACGGATAAGAAGCTCAGGAAATCGTCTTC GAAGCAGGTGGGTTGTATGAAGAAGCTGTAGACTCGGCAGCGAATGCTAC GCGTATGGATGCGAGGTTCACACGGGCTGAATGTGCATGGGAGTAATATG CTTTGGGAAGGGAACAAACTCAACAATCGGGAGTCTTACCCTCCCACGTC ATAGCTCGGGTGGGTTTGCTGTGCAGGTGGGCTGCCCGTTCAACATCATC TTCACTTGGTCAGTTGCAGCAACTACCCCCACCATAACATCGGTGAGTTA CCAGCCAGTATGGATGTCTGCTCGGAGTGGTGACGCTGTTTTTTTTCTCT TCTCCGCGCCTTTTTTTATATTTTGTAATCGGTTATTGTGCGTTTCTTTC CAGCCGCTCTTTATCGTTTCTTCACCCCTGTTTTTCCCGGCACAAACAGT GTTGCTGTTAGCGCACGAATGGGGTGCCCCCTTCACACATACCAACCCTG CAAGAATTTTGCTGCAACCTGACGCACGTACTGCACGTTCTCGTGAATAT TTCTCCGTCCGTGTTATGTTCGTTTCCTCTTCGTGTTTGATTCATGCTCG CCCGCCTGTTTCGCAAGTCCAACTGTGACCACAACCACGACCCTCGCGGA GCCGTCTCAAGCGTCGAGCAGGACGTGCTTCCGCTTTCAGTCGTCGAAAG AAGGATGGATGACCTACGGAGGTGGACCCCGGCAGACACAAAGCGCCAGA GATCTTCAAATTGCTCGGGATGGACCACGACGGGAAGATGCTATGTAAAA TCGGCAAACGGAAGGTGGGTGACGCGCCAGCTAGCTTCTGGCAGATGCGG GGCAAGAGCGGACGGATGATGCTGGCAATGTAGGATTTCGGTTTCGCTTG GATCTCAAACGGGGTAGTCAACCTAACGCCGTTGACCTAATGATGCAAAC AAAGAAACCCGGCATACAATCGAATGGCCGAATGCTTATCTGCAGGTGGT GTCGTTACCGCTTCCAACCGACAATGTAGTGACTATGATGACCGTCTTGT GCGTTGTTTTGTGGTCTTAATCCTGCCCCCTGCCCAAACGGTGTACAACG CCATGCAAAAAATTAAAGACGGGTTGTACTCCAGTCCAGAGCAGGCTCGG ACTTCCTGTCGACTCTTCAGAGAGAGCCCGGGATGTTCGTCGAGCGCACC TTCGACTCCTTCGGGAGACTCGTGAATGTGTTCTGGGCCACCGTCGACCA ACAGGACAAGATGGGCGAGATTCAGGGGTTGCATCCAGCTCGACACCACG GCATTCTTGAACAGGTGATCACGCTGCGGTGTTCTCATGATGCGTGACTT CTGGAAGTCCTTAAGGCATCTGTAGTTTGTGATTTTGTTTTGATTTGGAT TTTGGGTCTTCGACCATTCCCCGCTACTGTAATCTATCTTCCTCGTCGTT TCCTGTTGCAAGACCACCCATATTGTTTCCCGTGCTTCGCGCCAACGATA ACTCCGTTACATACGCTCTGGTTCATGTTTGCTTCCTTAACCGCAGGTAC GGGTGCCCCCTTCTTTCATCGTGGGTGTTGACGGCGAAAACCGCAGCTGC ATATTGGGACAGGGTATGCTGCGGTCGGTGTGCACTGAGATCTTTGAGTG ATTCTTGAAGCAGTACTAGACCGCTGCTGGCGGACGAAGGCCGAAGTTGA GGCAATAGAGGGTTGTCGCCGTCGCTATGTACCTGACGTAAGCGAGGCTT CGGCGAGGCTTTGGCAGTCGGATGTCCCGAGGGGACTGCTCTACGCCCCC TCAACGTTGTGTTCCCGACGCCGTCAATGATCGTCGCGCGCATGCTTTAT CGTCGCACACAACACTAACGCCTCTTCCGCCTCCGCCGACCCATTCTGTA TTGTTGCCCTTAGGTGGTCTTGAGCGACGCGGACATTGCCAATACTTCGG CCGTTCGGAATTGCTGGCAGACCACGTTGCACCTGTTCTGCTTGTGGCAC GTTTTCAAGAACGTGTTAAAGAACTGTGCGAAGGCGTGTCCTGATGCTGA CCAACGCGCAGAGATACTCCGTCTCTTTCGCAGCGCAGCCTACGCAGCTA CCCCGGAGGTGAGATATCTCTCCGGTAGGATGCGGTAGAAGCCCCCAACC TGTCCTACATATATCATGCATGGGATTCCCCCACCCCAATTCTCTGCTTG GTGGTGCGCACCTCTCCCTAACCGCTCCTAAAGATGTTCCTGTACGTATC GCGACGCTGGGAACTCTTTCCCTCACTCTCAGGCCTTCCTATCACACCGG GCGAACCTGGAGAGGATCGTCGAGGACACCTCGTGCGAGAAGTACATCGC TGATCTCATCGCGGAGTTCTTACCTAATTTTAGCGCCACACAACAACTGG TCTTCCGAGCTAATGTTCGCATTGTGTGGGAAGCATGACAAATGCCACAC ATATCCTCATCGCAACGACGACGCCTTTGGGCGCTTAACGTATTCCCTGT TGCCACAAAGGGACAAATCCAAGTGGGCGTTCTCCTTGCGGCCGACGGTT GTCACCCTAGGCATGGTTGCCACCCAGCGCGTGGACGGTTTGTTTTCGGT GGCAAAAAAATCGGGGGTTGAGAAGAAGCTGTCACTTTGCGCTCTTTGGG ATCGCCTCCAAGGTGTGATCCAGATGCTGGAGATCGAGCACAGCAGGCGA GTTTAACGGCCTTTGTTCACATACATATGTACCTACGTGCTGTACCCGGG TATTCTGCCATATAAAAAAGTTGTCTGTTGTGAACATAGAGAGGTGTGGT GTGCACGGTCTATGCCATGCTCAGTTGCGCAAGTTCAATTGAGTGTAGCT CGACATGTTCTTCACTCTTAGGGTTGAAGTGCGCCAATAGGCATCACAAC CACATTGACTTCTTCCCGGAGGCCAATATCACACGGCATCTACGCCCCTG CGAAACTTCCGTGTACCTACTCCTCACAGGTTAGGAACCCCAGCCGTTAC TGCCCCAAAGCTTTTCCAGGAGAACCACCTGCAGGCGTTTTTCAACCCCA TCAAACAAGAGCTCGAGCGCATTGGCGCCAGCCAATACTGCCACAGGGTG AGAAGTGCACCGCATCTTTTTTTTTAGCTACGCAGTCGCTAGAACCTGTT GTTTCTCCCTGTTGCGTGTCCAAAACACCCACCTCCAACCGGGCTCAATG CATGTGCCCAGTGTACAATAATCCCATCCATTGGCGTAACGTAGCTTCAG CAAGACTCATCAAAATATTCCGCCTCCCATCCTCGAAACTGCTATCCTCG GTACTGCAGGAACTCAGACCCGAATTGGGCGGATCGCAGTCGTGGAACTC ATGGGTGCAGGCTCCGCCGACGACGGCGGCTATCCCCTACCTCTGGCCCA CAATTTCCTTAGTGAAACAATCGGAGGCTGTCGCGGACGCGTGAACGCGT TCGAGGAAGCGCCAGCCGACATCGACCTTGACCAAGACATAAAGCTTGGG CCTGACGCTCCATCGACGAAGGAGAGCAGTGCGTGGGCGCGTGCCTCCTT GACGGCATTCTTGGCGCTCATCGCTAACGTTCCCATCAATCTTGTTGCCG CCGTGCGATACAACCTCACTGCAAAGAA
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Coding sequence (CDS) from alignment at P-littoralis_Contig655:13355..17232+

>mRNA_P-littoralis_Contig655.1.1 ID=mRNA_P-littoralis_Contig655.1.1|Name=mRNA_P-littoralis_Contig655.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=870bp|location=Sequence derived from alignment at P-littoralis_Contig655:13355..17232+ (Pylaiella littoralis U1_48)
CGCCATAGGAGAGTCAAGACGAGGAGATACAGGCATCGCGAAATCGTCTG
CAAGCGCAGGGGGAAGCCGCGGAAGGATGCACCGGGAAGCACGGATAAGA
AGCTCAGGAAATCGTCTTCGAAGCAGTCCAACTGTGACCACAACCACGAC
CCTCGCGGAGCCGTCTCAAGCGTCGAGCAGGACGTGCTTCCGCTTTCAGT
CGTCGAAAGAAGGATGGATGACCTACGGAGGTGGACCCCGGCAGACACAA
AGCGCCAGAGATCTTCAAATTGCTCGGGATGGACCACGACGGGAAGATGC
TATGTAAAATCGGCAAACGGAAGACGGGTTGTACTCCAGTCCAGAGCAGG
CTCGGACTTCCTGTCGACTCTTCAGAGAGAGCCCGGGATGTTCGTCGAGC
GCACCTTCGACTCCTTCGGGAGACTCGTGAATGTGTTCTGGGCCACCGTC
GACCAACAGGACAAGATGGGCGAGATTCAGGGGTTGCATCCAGCTCGACA
CCACGGCATTCTTGAACAGGTGGTCTTGAGCGACGCGGACATTGCCAATA
CTTCGGCCGTTCGGAATTGCTGGCAGACCACGTTGCACCTGTTCTGCTTG
TGGCACGTTTTCAAGAACGTGTTAAAGAACTGTGCGAAGGCGTGTCCTGA
TGCTGACCAACGCGCAGAGATACTCCGTCTCTTTCGCAGCGCAGCCTACG
CAGCTACCCCGGAGGCCTTCCTATCACACCGGGCGAACCTGGAGAGGATC
GTCGAGGACACCTCGTGCGAGAAGTACATCGCTGATCTCATCGCGGAGTT
CTTACCTAATTTTAGCGCCACACAACAACTGGTCTTCCGAGCTAATGTTC
GCATTGTGTGGGAAGCATGA
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