prot_P-littoralis_Contig653.1.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig653.1.3
Unique Nameprot_P-littoralis_Contig653.1.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length490
Homology
BLAST of mRNA_P-littoralis_Contig653.1.3 vs. uniprot
Match: A0A6H5JBI1_9PHAE (MEP14 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBI1_9PHAE)

HSP 1 Score: 486 bits (1251), Expect = 1.040e-165
Identity = 321/470 (68.30%), Postives = 368/470 (78.30%), Query Frame = 0
Query:   24 DVDCVGVKLCEEG----ACIAAPDCDLSAIEINTTLNQVRGGRCRTTLEQIRIADPDAVSKEGDVFTLNKRLWIRDGSVLEIHGGAAAASPNETVSQLRMKSGEDFAAKIIAWHGKISINSTSITSWDATVDGPDARAVESGRAFIAALSSEASSGTV-FESRMDVQGSEISYLGNAGDYHNDTDHDYGLVWKVKGYDDRYPEDGDLGLFERIGVYGILEGNDIHHNYMGAYCYGMKGDMVWSNNEIYNNTLNGINPQDNSDGMKIHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNLEGDFGIVESFDVKVYDNVMVGGKYGIRLSLGAENCEVYGNRMLNSSRYGVFFYMGSDEPEASVD--GRPRNNTIRNNFISNPAEGKGVAVKESDDNFILDNTFELIDTLRFDDSFNTLVAGNILPDGVSFDLENDATLAEGSQEPTD 486
            D +C G  +C EG     C    DC  +AI+    + Q+RG RCR TLEQIR   PD VSK G  +TLN ++W+RDGS+LEIHG + A+SP+  VS L++KS    +A IIAWHGK+SI  T+ITSWDA++ GPD R +ES RA+IAALS E  + TV + SRMDV+ SEIS+LGN GDYHNDTD DYGL+WKV+GYDDRY   GDL +F+RIGVYG L+ N IH NY+GAYCYGMKGD  W++NEIY+N LNG+NPQDNSDGM I  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   NLEGDFGIVES  VKVYDNVM GGKYGIRLSLGA+ CEVY N + +S+RYGVFFY GSDE EAS D  GRPR N IR+N IS+P E KGVAVKESD+  ILDN F  ID+LRFDDS  TLV GN LPDGV+FDLEN ATLA+GSQ  TD
Sbjct:   27 DFNCWGSLMCNEGEYSGVCDTPNDCADTAIKFIDDVIQIRGWRCRVTLEQIRRVLPDTVSKVGTEYTLNNKIWLRDGSILEIHGASKASSPDAAVSLLKLKSDITSSAPIIAWHGKLSILDTAITSWDASLGGPDER-LES-RAYIAALSGENGAQTVVYTSRMDVEDSEISFLGNEGDYHNDTDSDYGLLWKVQGYDDRYG--GDLDIFDRIGVYGGLKRNSIHDNYIGAYCYGMKGDSNWTDNEIYDNYLNGMNPQDNSDGMTISNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCRRNLEGDFGIVESTGVKVYDNVMEGGKYGIRLSLGAQECEVYDNVISDSTRYGVFFYRGSDEAEASADWDGRPRLNVIRDNTISDPVEEKGVAVKESDNTMILDNKFSGIDSLRFDDSTETLVTGNELPDGVAFDLENGATLADGSQSSTD 492          
BLAST of mRNA_P-littoralis_Contig653.1.3 vs. uniprot
Match: D7FSX3_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSX3_ECTSI)

HSP 1 Score: 471 bits (1212), Expect = 3.460e-160
Identity = 306/437 (70.02%), Postives = 351/437 (80.32%), Query Frame = 0
Query:   53 TTLNQVRGGRCRTTLEQIRIADPDAVSKEGDVFTLNKRLWIRDGSVLEIHGGAAAASPNETVSQLRMKSGEDFAAKIIAWHGKISINSTSITSWDATVDGPDARAVESGRAFIAALSSEASSGT-VFESRMDVQGSEISYLGNAGDYHNDTDHDYGLVWKVKGYDDRYPEDGDLGLFERIGVYGILEGNDIHHNYMGAYCYGMKGDMVWSNNEIYNNTLNGINPQDNSDGMKIHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNLEGDFGIVESFDVKVYDNVMVGGKYGIRLSLGAENCEVYGNRMLNSSRYGVFFYMGSDEPEASVD--GRPRNNTIRNNFISNPAEGKGVAVKESDDNFILDNTFELIDTLRFDDSFNTLVAGNILPDGVSFDLENDATLAEGSQEPTD 486
            T + ++    CR TLEQIR+  PD VSK+G  +TLN ++W+RDGS+LEIHG + A+SP+  VS L++KS    +A IIAWHGK+SI  T+ITSWDA++ GPD R    GRA+IAALS E  + T V+ SRMDV+ SEIS+LGN GDYHND D DYGL+WKV+GYDDRY   GDLG+F+R+GVYG L+ N IH NY+GAYCYGMKGD  W++NEIY+N LNG+NPQDNSDGM I  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  NLEGDFGIVES  V+VY NVM GGKYGIRLSLGAE C+VY N M +S+RYGVFFY GSDE EAS D  GRPR N IRNN IS+P E KG+AVKESD+  ILDN F  IDTLRFDDS  TLV GN LPDGV+FDLEN ATLA+GSQ  TD
Sbjct:   34 TPVLKLSSSTCRVTLEQIRLVLPDTVSKDGTEYTLNNKIWLRDGSILEIHGASKASSPDAAVSLLKLKSDTTSSAPIIAWHGKLSILDTAITSWDASLGGPDERL--EGRAYIAALSGENGAQTIVYTSRMDVEDSEISFLGNEGDYHNDIDSDYGLLWKVQGYDDRYG--GDLGIFDRVGVYGGLKRNSIHDNYIGAYCYGMKGDSNWTDNEIYDNYLNGMNPQDNSDGMTISEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRNLEGDFGIVESTGVQVYGNVMEGGKYGIRLSLGAEECDVYDNVMSDSTRYGVFFYRGSDEAEASADWDGRPRLNVIRNNTISDPGEEKGIAVKESDNTMILDNKFSGIDTLRFDDSTETLVTGNELPDGVAFDLENGATLADGSQPSTD 466          
BLAST of mRNA_P-littoralis_Contig653.1.3 vs. uniprot
Match: A0A7L4XTJ3_SACJA (Mannuronate C5-epimerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A7L4XTJ3_SACJA)

HSP 1 Score: 462 bits (1190), Expect = 1.410e-156
Identity = 299/490 (61.02%), Postives = 356/490 (72.65%), Query Frame = 0
Query:    1 MASKALACFALLQGITFASTCDMDVDCVGVKLCE-EGACIAAPDCDLSAIEINTTLNQVRGGRCRTTLEQIRIADPDAVSKEGDVFTLNKRLWIRDGSVLEIHGGAAAASPNETVSQLRMKSGEDFAAKIIAWHGKISINSTSITSWDATVDGPDARAVESGRAFIAALSSE-ASSGTVFESRMDVQGSEISYLGNAGDYHNDTDHDYGLVWKVKGYDDRYPEDGDLGLFERIGVYGILEGNDIHHNYMGAYCYGMKGDMVWSNNEIYNNTLNGINPQDNSDGMKIHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNLEGDFGIVESFDVKVYDNVMVGGKYGIRLSLGAENCEVYGNRMLNSSRYGVFFYMGSDEPEASVD--GRPRNNTIRNNFISNPAEGKGVAVKESDDNFILDNTFELIDTLRFDDSFNTLVAGNILPDGVSFDLENDATLAEGSQEPTD 486
            MA KAL+  A    +   + C  D  C GV +C  +  C    DCD S+I +   + Q+RG RCR T+E I +A PDAV+K+G  +TLN +L +RDG +LEIHG + A+SP+  V+ L++KS E   A IIA  G+ISI  T+ITS+D +  G D R    GRA+IAALS E  ++G  + SRMDV+ SEISYLGN GDYHND ++DYGLVWKV+GYDDR+P  GDL LF R+GVYG L+ N IH  ++GAYCYGMKG+ +W+ NEIY+N LNG+NPQDNSDGM I   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX               NLEGDFGIVES  V V+DNVM GGKYGIRLSLGA+ C+VY N M ++ RYGVFFY GSDE EAS D  GRPR N IRNN IS+P EGKGVAV  SDDNFI+DN F  ID+LRFDD+ NTLV GNILPDGV F L++ ATLA+GSQ  TD
Sbjct:    1 MAGKALSALAATLSLCAVNACG-DHHCWGVNICTGDDVCGPPSDCDASSITVEDDVIQIRGSRCRVTMEAIHLALPDAVTKDGTEYTLNNKLVVRDGCILEIHGASKASSPDAVVTLLKLKSDETSYAPIIAMAGQISILDTAITSYDESKGGSDERL--EGRAYIAALSLEDETTGEAWISRMDVEDSEISYLGNEGDYHNDINNDYGLVWKVEGYDDRFP--GDLSLFSRVGVYGTLKRNKIHDMFIGAYCYGMKGNTLWTGNEIYDNYLNGMNPQDNSDGMTISDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSTDYAEAYGNTCRRNLEGDFGIVESTGVTVHDNVMEGGKYGIRLSLGAQECDVYDNVMSDNFRYGVFFYRGSDEAEASADWDGRPRLNYIRNNKISDPVEGKGVAVTGSDDNFIIDNEFIGIDSLRFDDAQNTLVTGNILPDGVEFTLDDGATLADGSQSDTD 485          
BLAST of mRNA_P-littoralis_Contig653.1.3 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE)

HSP 1 Score: 175 bits (444), Expect = 1.860e-45
Identity = 140/424 (33.02%), Postives = 213/424 (50.24%), Query Frame = 0
Query:   79 SKEGDV-------FTLNKRLWIRDGSVLEIHGGAAAASPNETVSQLRMKSGEDFAAKIIAWHGKISINSTSITSWDATVDGPDARAVESGRAFIAALS------SEASSG----TVFESRMDVQGSEISYLGNAGDYHNDTDHDYGLVWKVKGYDDRYPEDGDLGLFERIGVYGILEGNDIHHNYMGAYCYG-MKGDMVWSNNEIYNNTLNGINPQDNSDGMKIHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNLEGDFGI--VESFDVKVYDNVMVGGKYGIRLSLGAENCEVYGNRMLNSSRYGVFFYMGSDEPEASVDGRPRNNTIRNNFISNPAEGKGVAVKESDDNFILDNTFELIDTLRFDDSFNTLVAGNI--------LPDGVSFDLEND 474
            SK GD+       + L + L++ DG  L++HG +A    +E    LR+ S  D    + A  G +   ST + +WD +++GPD R  E GR++++A+S      S+  +G     + E+RMD++ SE+ YLG    YH      YGL WKV+G+     +  +  LFE + VYG +  +DIHHN  G Y YG  +GD  W  N++++N+  G +P D+SD + IH                                          XXXXXXXXXXX     D G+  +ESF+  V DN+    KYGIR S+G+     + N +  S+RY  + Y+GSD P+    GR ++N  + N I    E   + + ++D    +DNTFE   T+RF+D+  TL++GNI        + +G SFD  +D
Sbjct:   87 SKSGDISDSATGTWLLTEELFVEDGITLKVHGTSAGGDADE----LRLLSTSDTFINLRAHGGSLDFLSTKVFAWDTSINGPD-RDEEDGRSYVSAVSEVITDDSQTCNGRAKNNMGEARMDIEDSEMGYLG----YHGS--ESYGLTWKVRGF---CVDKSNHDLFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGD--WRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYDNGYHGIIASKRCNGVSIQGNEVYGGATSSAGIFLHRXXXXXXXXXXXXXXXXDAGLAMMESFNADVSDNIFENNKYGIRFSVGSGRNVFFNNVISGSTRYSTYSYLGSDAPDVVDSGRSQDNVFQENNIIGGVES--IKLLDADGTQFIDNTFEDATTIRFNDAKKTLMSGNIGLNMSKLKVVNGASFDASSD 492          
BLAST of mRNA_P-littoralis_Contig653.1.3 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI)

HSP 1 Score: 171 bits (432), Expect = 3.810e-42
Identity = 138/412 (33.50%), Postives = 198/412 (48.06%), Query Frame = 0
Query:   85 FTLNKRLWIRDGSVLEIHGGAAAASPNETVSQLRMKS-GEDFAAKIIAWHGKISINSTSITSWDATVDGPDARAVESGRAFIAALSSEASS--------GTVFESRMDVQGSEISYLGNAGDYHNDTDHDYGLVWKVKGY--DDRYPEDGDLGLFERIGVYGILEGNDIHHNYMGAYCYGMKGDMVWSNNEIYNNTLNGINPQDNSDGMKI-HGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNLEGDFGI--VESFDVKVYDNVMVGGKYGIRLSLGAENCEVYGNRMLNSSRYGVFFYMGSDEPEASVDGRPRNNTIRNNFISNPAEGKGVAVKESDDNFILDNTFELIDTLRFDDSFNTLVAGNILPDG-VSFDLENDATLAEGS 481
            + L   L+I  G V    G +A    N    QLR++S G D   ++    G +    T +TSWD     P     E+GR+F+  +S + +           + E RMD+  SEI+YLG     + D++  YG+ WKV+G+  D   PE     +FE   VYG L G+DIHH Y G Y YG +G  VW+NN++++N   G +P D+SD + I +                                                      N++ D GI  +ESFD ++Y N++ G KYGIR+SLG+ N EVY N   + S+YG++ Y GSDEP+ S DGRP  N +  N + +   G  V +KE DDN    NTF  +D   F +S NT+ +GN + DG +  D E DA     S
Sbjct:  491 WLLAAELYITGGGVFYCKGTSAGGDCN----QLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQ-ETYENGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLG-----YFDSES-YGMTWKVRGFCKDLSNPE-----VFELTNVYGDLTGSDIHHLYYGHYSYGHQGG-VWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQ-DAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPDVS-DGRPSGNVLALNLVEDCPIG--VKIKEGDDNEFYQNTFINVDAFEFPESTNTMWSGNDIGDGCIEEDDEFDAASGSDS 881          
BLAST of mRNA_P-littoralis_Contig653.1.3 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE)

HSP 1 Score: 164 bits (416), Expect = 1.080e-41
Identity = 140/476 (29.41%), Postives = 215/476 (45.17%), Query Frame = 0
Query:   42 PDCDLS-AIEINTTLNQVR------GGRCR---TTLEQIRIADPD-----AVS-KEGDV-------FTLNKRLWIRDGSVLEIHGGAAAASPNETVSQLRMKSGEDFAAKIIAWHGKISINSTSITSWDATVDGPDARAVESGRAFIAALS----------SEASSGTVFESRMDVQGSEISYLGNAGDYHNDTDHDYGLVWKVKGYDDRYPEDGDLGLFERIGVYGILEGNDIHHNYMGAYCYG-MKGDMVWSNNEIYNNTLNGINPQDNSDGMKIHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNLEGDFGI--VESFDVKVYDNVMVGGKYGIRLSLGAENCEVYGNRMLNSSRYGVFFYMGSDEPEASVDGRPRNNTIRNNFISNPAEGKGVAVKESDDNFILDNTFELIDTLRFDDSFNTLVAGNILPDGVSFDLENDATLAEGS 481
            PDCD S A+ +       R       GR R    TLEQI     D     AV  K GDV       + L + +++ DG  L++HG +A    +E    LR+ S  D    + A+ G +   ST + +WD + + PD +    GR++I+A+S          +  +   + E+RMD++ SE++YLG    YH      YGL WKV+G+     + G+  LF+ + VYG +  +DIHHN  G Y YG  +GD  W  N++++N+  G +P D+SD + IH                                                      +  GD G+  +ESF+  V DN     KYG+RLS+G        N +  S+ +  F Y+G+D+PE    GR ++N    N I    E   + +KE+D    +DNTF+    +RF D+  TL++GN      +  ++  AT  E S
Sbjct:    8 PDCDSSIAVSVRYNAESARLYIESANGRTRGGCVTLEQIWEQQVDGSPLYAVDPKSGDVSRSATGTWLLTEEMYVEDGITLQVHGISAGGDADE----LRLLSTSDTFIHLRAYGGSLDFLSTKVFAWDTSKNAPD-QDESDGRSYISAVSEVITDDRQTCNGRAKNNMGEARMDIENSEMAYLG----YHGT--ETYGLTWKVRGF---CVDKGNPELFDDVNVYGNIYDSDIHHNNFGVYTYGHQQGD--WRRNKMHDNSGYGFDPHDDSDFLTIHDNEVWNNGYHGIIASKRCNGVSIQGNEVYGGSSGSAGIFLHRSSDNGIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRLSVGCGRNIFSKNVITGSAEFNTFSYLGADKPEVVDSGRSQDNVFMENNIIGGVES--ILLKEADGTQFIDNTFKDAAAIRFVDATKTLMSGNTGLADSTLKVDRGATFDESS 465          
BLAST of mRNA_P-littoralis_Contig653.1.3 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 160 bits (404), Expect = 1.010e-39
Identity = 141/476 (29.62%), Postives = 216/476 (45.38%), Query Frame = 0
Query:   39 IAAPDCDLSAIEIN-----TTLN--------QVRGG--------RCRTTLEQIRIADPDA--VSK-EGDVFTLNKRLWIRDGSVLEIHGGAAAASPNETVSQLRMKSGEDFAAKIIAWHGKISINSTSITSWDATVDGPDARAVESGRAFIAALSS------EASSG----TVFESRMDVQGSEISYLGNAGDYHNDTDHDYGLVWKVKGY--DDRYPEDGDLGLFERIGVYGILEGNDIHHNYMGAYCYG-MKGDMVWSNNEIYNNTLNGINPQDNSDGMKIHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNLEGDFGI--VESFDVKVYDNVMVGGKYGIRLSLGAENCEVYGNRMLNSSRYGVFFYMGSDEPEASVDGRPRNNTIRNNFISNPAEGKGVAVKESDDNFILDNTFELIDT----LRFDDSFNTLVAGNILPDGVSFDL 471
            I+ PDCD S IE++     TT          + RGG          R     +   DPD+  VS+ E   + L + L++ DG  L+++G       +E    LR+ S  +    + A  G +    T + SWD + + PD    + GR++I+A+S       E   G    T+ E+RMD++ SEI YLG       D++  YGL WKV+G+  D   PE     +F+ + VYG +  +DIHH   G Y YG  +GD  W  N++++N+  G +P D+SD + IH                                                      +  GD G+  +ESF+  V +N     KYG+R+S+G  +     N + N+S+Y  + Y+GSDEP+    GR +NN    N  S   E   + +KE+D    LDN FE+ D     +RFDD+ N+++ GN   D   F+L
Sbjct:   38 ISKPDCD-SDIEVSIRYAGTTKRLYLESADGETRGGCATLGQIWESRAGKAPLYAVDPDSGDVSETETGTWLLTEELYVEDGITLKVYGTDEGGDADE----LRLLSTSETYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETD-GRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLG-----FQDSES-YGLTWKVRGFCKDKSNPE-----IFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGD--WRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNSFSGAEET--IKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNTGLDEGDFEL 492          
BLAST of mRNA_P-littoralis_Contig653.1.3 vs. uniprot
Match: Q7XAK2_9PHAE (Mannuronan C-5-epimerase n=2 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAK2_9PHAE)

HSP 1 Score: 156 bits (394), Expect = 2.150e-38
Identity = 152/431 (35.27%), Postives = 222/431 (51.51%), Query Frame = 0
Query:   67 LEQIRIADPDAVSKEGDVFTLNKRLWIRDGSVLEIHGGAAAASPNETVSQLRMKSGEDFAAKIIAWHGKISINSTSITSWDAT-----VDGPDARAVESGRAFIAALSSEASSG----TVFESRMDVQGSEISYLGNAGDYHNDTDHDYGLVWKVKGY--DDRYPEDGDLGLFERIGVYGILEGNDIHHNYMGAYCYGMK-GDMVWSNNEIYNNTLNGINPQDNSDGMKIHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNLEGDFG--IVESFDVKVYDNVMVGGKYGIRLSLGAENCEVYGNRMLNSSRYGVFFYMGSDEPEASVDGRPRNNTIRNNFISNPAEGKGVAVKESDDNFILDNTFELIDTLRFDDSFNTLVAGNI--------LPDGVSFDLENDA 475
            L  ++ +  D  S     + L + L++ DG  L++HG +A  + NE    LR+ S       + A  G +   ST + +WD +      DG  AR+  S  + I   S E   G    T+ E+RMD++ SE++YLG  G         YGL WKV+G+  D   PE     +F+ + VYG +  +DIHHN+ G Y YG + GD  W  N++++N   G +P D+SD + IH    XXXXXXXXXXXXXXXXXXXXXXXXXX                      X    GD G  ++ESF+  V +N     KYG+RLS+G  +     N + +SS+Y V+ Y GSD+P     GR ++N   +N I+   E   + +  +D    +DNTF+   T RF+D+  TL++GN         +  G  FD ++D+
Sbjct:   85 LYAVKPSSGDVSSSATGTWLLTEDLYVEDGITLQVHGTSAGGNANE----LRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKVRTDGSKARSYISAVSEIITDSKEKCDGKAKKTMGEARMDIEDSEMAYLGYQGS------ESYGLTWKVRGFCKDGSNPE-----VFDEVNVYGNIYDSDIHHNHFGVYTYGHEQGD--WRRNKMHHNREYGFDPHDDSDFLTIHDNKVXXXXXXXXXXXXXXXXXXXXXXXXXXGSSKSVGIFLHRSSDDAIVKDNXXXXNGDAGMALMESFNADVSNNKFEDNKYGVRLSVGCADNVFSKNVISDSSKYNVYTYEGSDDPWVVDSGRSQDNIFSDNTITGGDES--IKLTMADGTEFIDNTFKRAKTARFEDAETTLMSGNTGLGSATLKVSKGACFDKKSDS 496          
BLAST of mRNA_P-littoralis_Contig653.1.3 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI)

HSP 1 Score: 156 bits (394), Expect = 2.350e-38
Identity = 132/442 (29.86%), Postives = 203/442 (45.93%), Query Frame = 0
Query:   74 DPDAVSKEGDVFT-------LNKRLWIRDGSVLEIHGGAAAASPNETVSQLRMKSGEDFAAKIIAWHGKISINSTSITSWDATVDGPDARAVESGRAFIAALSS------EASSG----TVFESRMDVQGSEISYLGNAGDYHNDTDHDYGLVWKVKGY--DDRYPEDGDLGLFERIGVYGILEGNDIHHNYMGAYCYG-MKGDMVWSNNEIYNNTLNGINPQDNSDGMKIHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNLEGDFGI--VESFDVKVYDNVMVGGKYGIRLSLGAENCEVYGNRMLNSSRYGVFFYMGSDEPEASVDGRPRNNTIRNNFISNPAEGKGVAVKESDDNFILDNTFELIDT----LRFDDSFNTLVAGNILPDGVSFDL--ENDATL---AEGSQEP 484
            DPD+    G+V T       L + L++ DG  L+++G  A    +E    LR+ S  +    + A  G +   ST + SWD + + PD    + GR++I+A+S       E   G    T+ E+RMD++ SEI YLG     + D++  YGL WKV+G+  D   PE     +F+ + VYG +  +DIHH   G Y YG  +GD  W  N++++N+  G +P D+SD + IH                                                      +  GD G+  +ESF+  V +N     KYG+R S+G  +     N + N++ Y  + Y+G+DEP+    GR +NN    N  S   E   + +KE+D    LDN FE+ D     +RFD++   L+ GN   D   F+L  +NDA     A+   EP
Sbjct:   89 DPDS----GNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADE----LRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETD-GRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLG-----YWDSES-YGLTWKVRGFCEDKSNPE-----VFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGD--WRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEET--IKIKEADGTQFLDNVFEVGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACFDGEADSGYEP 506          
BLAST of mRNA_P-littoralis_Contig653.1.3 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE)

HSP 1 Score: 140 bits (353), Expect = 5.910e-33
Identity = 124/427 (29.04%), Postives = 188/427 (44.03%), Query Frame = 0
Query:   71 RIADPDAVSKEGDVFTLNKRLWIRDGSVLEIHGGAAAASPNETVSQLRMKS-GEDFAAKIIAWHGKISINSTSITSWDATVDGPDARAVESGRAFIAALSSEASSGT--------VFESRMDVQGSEISYLGNAGDYHNDTDHDYGLVWKVKGYDDRYPEDG---DLG---LFERIGVYGILEGNDIHHNYMGAYCYGMKGDMVWSNNE------------IYNNTLNGINPQDNSDGMKIHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNLEGDFGIVESFDVKVYDNVMVGGKYGIRLSLGAENCEVYGNRMLNSSRYGVFFYMGSDEPEASVDGRPRNNTIRNNFISNPAEGKGVAVKESDDNFILDNTFELIDTLRFDDSFNTLVAGNILPDGVSFD 470
            +I  P +V+K+   + L   L++ +G++    G       +E    LR++S G D   ++    G +  + T +TSWD     P     E GR+F+  +S + +  T        + E RMD+  SE+ Y+G            YGL WKV+    R    G   DL    +FE   VYG ++ +DIHH Y G Y YG +G  VW+NNE            +YNN  +GI      + +KI+                                                        +    ++ESF+  ++DN + G ++GIR+SLG+    VY N   + S +G++ YMGSDEP+ S +GRP  NT  NN ++N A G  V  K SD+  + +N F   + L F D+  T  +GN LP GV  D
Sbjct:   53 KITAPTSVTKK---WLLEAELYVTNGAIFYCIGSEEGGDCDE----LRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQ-ETYEGGRSFLNCVSEKLTGETCDGMAKNDMGECRMDIINSEMGYMGFFDS------ESYGLTWKVRRQAGRGVVRGFCKDLSNPDVFETTNVYGDIKNSDIHHMYYGHYSYGHQGG-VWTNNEMHDNHQYVANNKVYNNYNHGIIASKRCNNVKIYDNQVSDGGPDAVGIFLHRSSDNAEVYGNKIWNMP----------------------DAGIALLESFNADIHDNEIDGVQFGIRMSLGSGGNSVYDNEFNDCSDWGLYTYMGSDEPDVS-NGRPNGNTFNNNKVTNSAGG--VKFKNSDNIVVTNNEFTGTEELEFYDAQATTWSGNSLPSGVCID 439          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig653.1.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A6H5JBI1_9PHAE1.040e-16568.30MEP14 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D7FSX3_ECTSI3.460e-16070.02Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A7L4XTJ3_SACJA1.410e-15661.02Mannuronate C5-epimerase n=1 Tax=Saccharina japoni... [more]
Q7XAJ7_9PHAE1.860e-4533.02Mannuronan C-5-epimerase n=1 Tax=Laminaria digitat... [more]
D8LC73_ECTSI3.810e-4233.50Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus sili... [more]
Q7XAJ8_9PHAE1.080e-4129.41Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina... [more]
D7FXE4_ECTSI1.010e-3929.62Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
Q7XAK2_9PHAE2.150e-3835.27Mannuronan C-5-epimerase n=2 Tax=Laminaria digitat... [more]
D7G339_ECTSI2.350e-3829.86Mannuronan C-5-epimerase n=2 Tax=Ectocarpus silicu... [more]
A0A6H5JGU8_9PHAE5.910e-3329.04MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 373..395
e-value: 670.0
score: 8.4
coord: 232..253
e-value: 1400.0
score: 6.3
coord: 255..277
e-value: 6100.0
score: 1.6
coord: 408..431
e-value: 2500.0
score: 4.4
coord: 350..371
e-value: 430.0
score: 9.7
coord: 303..325
e-value: 4.4
score: 16.3
coord: 279..301
e-value: 3.2
score: 16.7
IPR039448Right handed beta helix domainPFAMPF13229Beta_helixcoord: 226..336
e-value: 1.6E-13
score: 50.8
IPR007742Periplasmic copper-binding protein NosD, beta helix domainPFAMPF05048NosDcoord: 348..463
e-value: 4.5E-8
score: 32.7
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 49..407
e-value: 9.9E-71
score: 240.7
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 234..443

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig653contigP-littoralis_Contig653:30625..46776 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig653.1.3mRNA_P-littoralis_Contig653.1.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig653 30431..49842 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig653.1.3 ID=prot_P-littoralis_Contig653.1.3|Name=mRNA_P-littoralis_Contig653.1.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=490bp
MASKALACFALLQGITFASTCDMDVDCVGVKLCEEGACIAAPDCDLSAIE
INTTLNQVRGGRCRTTLEQIRIADPDAVSKEGDVFTLNKRLWIRDGSVLE
IHGGAAAASPNETVSQLRMKSGEDFAAKIIAWHGKISINSTSITSWDATV
DGPDARAVESGRAFIAALSSEASSGTVFESRMDVQGSEISYLGNAGDYHN
DTDHDYGLVWKVKGYDDRYPEDGDLGLFERIGVYGILEGNDIHHNYMGAY
CYGMKGDMVWSNNEIYNNTLNGINPQDNSDGMKIHGNHVHDNGWHGIEYS
KRCLGAEVYNNRVEDNARAGIFFHRSTDGAIAYNNTCKGNLEGDFGIVES
FDVKVYDNVMVGGKYGIRLSLGAENCEVYGNRMLNSSRYGVFFYMGSDEP
EASVDGRPRNNTIRNNFISNPAEGKGVAVKESDDNFILDNTFELIDTLRF
DDSFNTLVAGNILPDGVSFDLENDATLAEGSQEPTDDDE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006626PbH1
IPR039448Beta_helix
IPR007742NosD_dom
IPR012334Pectin_lyas_fold
IPR011050Pectin_lyase_fold/virulence