mRNA_P-littoralis_Contig65.136.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig65.136.1
Unique NamemRNA_P-littoralis_Contig65.136.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig65.136.1 vs. uniprot
Match: D8LQH0_ECTSI (Chloride channel protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQH0_ECTSI)

HSP 1 Score: 580 bits (1495), Expect = 2.910e-205
Identity = 296/338 (87.57%), Postives = 312/338 (92.31%), Query Frame = 1
Query:    1 IMVISSIMTTVAFFLPLAVGECRKVPTDLEGWSPAGVSSIDRLVTLNCHHGEYNELGTLFLNEQDGMIKLLFHFGDGALRWSTLVLFAVVFMTLQCVTSGVWVSNGQFIPSILSGAAMGRGVGELLGRNPRAYSLVGGAGILGGITRMTLSVTVMMVEASGWVLFVIPLMLVFIVARSVGNKINEGIYDTQISIKKMPFLEQEPPEETRTQNMRANQLMSKEVVCLRPIETVEAIMCLLRDYDHNCFPVVEDRDQRVLLGVVHRKNLAVLLNQRHFTEPSAQDPTSRPDVDLPELSWSLLEESYPNYPDVKDIQIRPEDLHCLMDIAAYVQIGPHAIN 1014
            IMVISSIMTTVAFFLPLAVGECR VPTDLEGWSP+GV+SI RLVTLNCHHGEYNELGTLFLNEQDG IKLLFHFGDG LR S+ VLF  VF+TLQCV SGVWVSNGQFIP+ILSGAAMGR +GELLGRN RAY+LVGGAGILGGITRM LSVTVMMVEASGWVLFVIPLMLVFIVARSVGN+ NEGIYDTQISIKKMPFLEQEPPEETRTQNMRANQLMSKEVVCLRPIETVEAIM +LRDYDHNCFPVVEDRDQRVLLGVVHRKNLAVLL +RHFTEPSAQDPT RP+  LPELSWS+LE SYP+YP ++DI+I  E  HCLMDIA YVQIGPH IN
Sbjct:   90 IMVISSIMTTVAFFLPLAVGECRPVPTDLEGWSPSGVASIKRLVTLNCHHGEYNELGTLFLNEQDGTIKLLFHFGDGTLRSSSAVLFFGVFITLQCVASGVWVSNGQFIPAILSGAAMGRSIGELLGRNSRAYALVGGAGILGGITRMALSVTVMMVEASGWVLFVIPLMLVFIVARSVGNRFNEGIYDTQISIKKMPFLEQEPPEETRTQNMRANQLMSKEVVCLRPIETVEAIMTILRDYDHNCFPVVEDRDQRVLLGVVHRKNLAVLLMERHFTEPSAQDPT-RPNDILPELSWSVLERSYPHYPMLQDIKIGGEHWHCLMDIAPYVQIGPHCIN 426          
BLAST of mRNA_P-littoralis_Contig65.136.1 vs. uniprot
Match: A0A836CM41_9STRA (Chloride channel protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM41_9STRA)

HSP 1 Score: 358 bits (920), Expect = 1.350e-115
Identity = 178/343 (51.90%), Postives = 239/343 (69.68%), Query Frame = 1
Query:   16 SIMTTVAFFLPLAVGECRKVPTDLEGWSPAGVSSIDRLVTLNCHHGEYNELGTLFLNEQDGMIKLLFHFGDGALRWSTLVLFAVVFMTLQCVTSGVWVSNGQFIPSILSGAAMGRGVGELLGRNPRAYSLVGGAGILGGITRMTLSVTVMMVEASGWVLFVIPLMLVFIVARSVGNKINEGIYDTQISIKKMPFLEQEPPEETRTQNMRANQLMSKEVVCLRPIETVEAIMCLLRDYDHNCFPVVEDRDQ---------RVLLGVVHRKNLAVLLNQRHFTEPSAQDPTS-RPDVDLPELSWSLLEESYPNYPDVKDIQIRPEDLHCLMDIAAYVQIGPHAIN 1014
            ++++ VA+FLPLA G CR VPT +EGWS +GV  ++ LV  NC  G YNEL +LFL E D  IK LFH G+G L W    LF V +  L+C+T G WV +G FIP++LSGAA+GR  G+LLGRNPR YS++G   +LGG+ RM +S+TV++ EASGWVLFV+PLM+VF+ ARS GN  N+G+ DTQI  +++PFL+ +PPE  R QN+R +Q+M++EV CL+P+ETVE +   LR  DHNCFPV++   +          VLLG + RK L VLL +R F  PSA D +  RP   LP L+W  LE  YP YP ++ + +  ED  CL+D+AAYVQ+GPH++N
Sbjct:  242 TLVSVVAWFLPLAAGRCRPVPTHVEGWSESGVRVLNSLVRHNCPAGHYNELASLFLVEPDQAIKALFHLGNGTLSWHAPALFFVAYFALECLTPGAWVCSGVFIPTLLSGAALGRCTGQLLGRNPRTYSIMGAGSLLGGVMRMLISLTVIITEASGWVLFVLPLMVVFLAARSAGNHFNDGMNDTQILARRIPFLQHQPPESIRQQNVRVHQIMTQEVKCLQPVETVERVYRTLRSCDHNCFPVIDGESRPFRRRYTLRSVLLGTILRKTLLVLLARRRFAPPSADDASMPRP---LPVLAWGDLEGRYPKYPRMEHLDLSEEDGRCLIDLAAYVQVGPHSMN 581          
BLAST of mRNA_P-littoralis_Contig65.136.1 vs. uniprot
Match: A0A7S2XUS9_9STRA (Chloride channel protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUS9_9STRA)

HSP 1 Score: 233 bits (594), Expect = 7.340e-68
Identity = 131/347 (37.75%), Postives = 202/347 (58.21%), Query Frame = 1
Query:   22 MTTVAFFLPLAVGECRKVPTDLEGWSPAGVSSIDRLVTLNCHHGEYNELGTLFLNEQDGMIKLLFHFGDGA-------LRWSTLVLFAVVFMTLQCVTSGVWVSNGQFIPSILSGAAMGRGVGELLGRNPRA---------YSLVGGAGILGGITRMTLSVTVMMVEASGWVLFVIPLMLVFIVARSVGNKINEGIYDTQISIKKMPFLEQEPPEETRTQNMRANQLMSKEVVCLRPIETVEAIMCLLRDYDHNCFPVVEDRDQRVLLGVVHRKNLAVLLNQRHFTEPSAQDPTSRPDVDLPELSWSLLEESYPNYPDVKDIQIRPEDLHCLMDIAAYVQIGPHAIN 1014
            ++ +++FLPL  GEC   P D+E ++    + I  LV+ NC   EYN++ +LF  + D  IK LFHF +G           S L +F + ++ L C T G+ V +G F+P +LSGA+ GR  G LL +   A         Y+L+G A +LGG+ RMT+S+TV+++EA+G + +V+PLM+  + AR VGN     +Y   I +K++P+LE++     R  +M ANQ+M K+V CLRP+E V  I  LL    H+CFPVV+     VL+G V RK L+V++ Q+ F  P + D +S+  +  P L W +LE  YP YP+ +D+ +   +  C +D+  Y    P+ I 
Sbjct:  211 VSAISYFLPLMYGECTPRPVDMEKFTEQEKTLIGELVSFNCQPYEYNQVASLFFTDADTAIKQLFHFREGGGTKEIMTFGSSALFMFFLPYLALSCWTYGLNVPSGLFVPCLLSGASFGRLFGHLLHKLDNANGTFADSGTYALMGAAAVLGGMARMTISLTVILLEATGDMQYVVPLMITLMAARWVGNVFTPSLYHIHIHLKRLPYLEEDVDRPARMNDMIANQVMCKDVRCLRPVEKVGVIYDLLTSTQHHCFPVVDQGRGGVLVGSVLRKTLSVVIEQKAFG-PMSVDHSSKQRLS-PLLQWGVLEGMYPRYPNPEDLIVTSAERECWIDLRPYTNAAPYIIQ 555          
BLAST of mRNA_P-littoralis_Contig65.136.1 vs. uniprot
Match: A0A1Z5JAK4_FISSO (Chloride channel protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JAK4_FISSO)

HSP 1 Score: 233 bits (595), Expect = 2.190e-66
Identity = 132/352 (37.50%), Postives = 196/352 (55.68%), Query Frame = 1
Query:   22 MTTVAFFLPLAVGECRKVPTDLEGWSPAGVSSIDRLVTLNCHHG-EYNELGTLFLNEQDGMIKLLFHFGD-GALRWST-----LVLFAVVFMTLQCVTSGVWVSNGQFIPSILSGAAMGRGVGELLGR---------NPRAYSLVGGAGILGGITRMTLSVTVMMVEASGWVLFVIPLMLVFIVARSVGNKINEGIYDTQISIKKMPFLEQEPPEETRTQNMRANQLMSKEVVCLRPIETVEAIMCLLRDYDHNCFPVVEDRDQRVLLGVVHRKNLAVLLNQRHFTEPSA-----QDPTSRPDVDLPELSWSLLEESYPNYPDVKDIQIRPEDLHCLMDIAAYVQIGPHAIN 1014
            ++ ++F +P+  G C K+PTD++ W+    + ++ LV   C  G EYNE+ +L   E D  IK LFHF + GA   ST     L  F V ++ +  +T G+ V +G F+PS+LSGAA GR VG LL +         +   Y+L+G A +LGG+ RMT+S+TV+++EA+G + +V+PLML  + AR  GN  NEG+YD  I +K +PFLE + P       + A Q+MS EV CLRP+E    +  LL+   H  FP+V+      L G   R  L  LL +R F  P          T  P    P + W  +E++YP YP + D+ +R +D +C +D+  Y    P+ IN
Sbjct:  449 VSIISFLMPVLWGRCTKLPTDMQDWTNQEKNLVEALVPFRCVPGKEYNEVASLIFTESDIAIKQLFHFREAGASDMSTFSSGALFFFFVPYIAMATITYGIAVPSGLFVPSLLSGAAFGRLVGHLLHKLDHTNGTFADSGTYALIGAAAVLGGMARMTISLTVILLEATGDMQYVLPLMLTLMAARFTGNVFNEGLYDIHIHLKNIPFLEPDVPPIAERSEIVAGQVMSTEVKCLRPVERAGVVYDLLQQCGHGTFPIVDMASGGTLYGTASRYMLCTLLQRRAFGSPDVISGDYDGDTLGPRRLSPLVQWDTIEKAYPRYPRISDVHLREQDRNCWLDLRPYANTAPYTIN 800          
BLAST of mRNA_P-littoralis_Contig65.136.1 vs. uniprot
Match: A0A7S4S7C7_9STRA (Chloride channel protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4S7C7_9STRA)

HSP 1 Score: 227 bits (578), Expect = 6.470e-64
Identity = 128/359 (35.65%), Postives = 192/359 (53.48%), Query Frame = 1
Query:    1 IMVISSIMTTVAFFLPLAVGECRKVPTDLEGWSPAGVSSIDRLVTLNCHHG-EYNELGTLFLNEQDGMIKLLFHFGDGALRWST------LVLFAVVFMTLQCVTSGVWVSNGQFIPSILSGAAMGRGVGELLGRNPRAYSLVGGAGI---------LGGITRMTLSVTVMMVEASGWVLFVIPLMLVFIVARSVGNKINEGIYDTQISIKKMPFLEQEPPEETRTQNMRANQLMSKEVVCLRPIETVEAIMCLLRDYDHNCFPVVEDRDQRVLLGVVHRKNLAVLLNQRHFTEPSAQDPTSR-----PDVDLPELSWSLLEESYPNYPDVKDIQIRPEDLHCLMDIAAYVQIGPHAIN 1014
            ++ IS  +T ++F +PL    C ++PTD++ WS    + ++ LV   C  G EYNE+ +L   + D  IK LFHF +     S+      L LF V ++ +  +  G+ + +G F+PS+LSGAA GR  G LL +          +G          LGG+ RMT+S+TV+++EA+G + +V+PLML  + AR  GN  NEG+YD  I +K +PFLE E P       + A Q+MS +V CLRP+E    +  LLR+Y H  FP+V+   Q  L G   R  L  LL +R F  P             P    P + W  +E +YP YP + D+++RP + +C +D+  Y    PH +N
Sbjct:  456 VVAISIFVTIISFVMPLVWNRCTELPTDMQDWSNQEKNLVEALVPFRCVAGKEYNEVASLIFTDADMAIKQLFHFREAGQDDSSTFSSAALFLFFVPYVFMATIVYGIAIPSGLFVPSLLSGAAFGRLCGHLLHKLDHTSGTFADSGXXXXXXXXXXLGGMARMTISLTVILLEATGDMQYVLPLMLTLMAARFTGNVFNEGLYDIHIKLKNIPFLEPEVPTIAERHEIVAGQVMSTDVKCLRPVERAGVVYELLRNYSHGTFPIVDTASQGTLYGTASRSMLCTLLQRRAFGSPDVLSEYDGCGFLGPKRLSPLVQWDTIERAYPRYPTIDDVEMRPGEENCWLDLRPYANTAPHTVN 814          
BLAST of mRNA_P-littoralis_Contig65.136.1 vs. uniprot
Match: A0A7S1D5H2_CYCTE (Chloride channel protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D5H2_CYCTE)

HSP 1 Score: 218 bits (555), Expect = 1.330e-63
Identity = 133/360 (36.94%), Postives = 193/360 (53.61%), Query Frame = 1
Query:    1 IMVISSIMTTVAFFLPLAVGECRKVPTDLEGWSPAGVSSIDRLVTLNCH-HGEYNELGTLFLNEQDGMIKLLFHFGD-GALRWST-----LVLFAVVFMTLQCVTSGVWVSNGQFIPSILSGAAMGRGVGELLGRNPRAYSLVGGAGI---------LGGITRMTLSVTVMMVEASGWVLFVIPLMLVFIVARSVGNKINEGIYDTQISIKKMPFLEQEPPEETRTQNMRANQLMSKEVVCLRPIETVEAIMCLLRDYDHNCFPVVEDRDQRVLLGVVHRKNLAVLLNQRHF------TEPSAQDPTSRPDVDLPELSWSLLEESYPNYPDVKDIQIRPEDLHCLMDIAAYVQIGPHAIN 1014
            ++ +S +++TV+F +PL  G C + PTD++ W+    + +D LV   C    EYNE+ +L   + D  IK LFHF + GA   ST     L LF V ++ L  +T G+ V +G F+PS+LSGAA GR  G LL +          +G          LGG+ RMT+S+TV+++EA+G + +V+PLML  + AR  GN  NEG+YD  I +K +PFLE E P       + A Q+MS EV CLRP+E    +  LLR   H  FP+V+      L G   R  L  LL +R F      TE  A +      +  P + W  +E +YP YP V  I++R  D +  +D+  Y    P+ +N
Sbjct:   15 VLFVSMLVSTVSFVMPLIWGRCTQRPTDMQDWTNQEKNLVDALVAFRCDPKHEYNEVASLIFTDADTAIKQLFHFREAGADDSSTFSSAALFLFFVPYIALASITYGIAVPSGLFVPSLLSGAAFGRLCGHLLHKLDHTSGTFADSGXXXXXXXXXXLGGMARMTISLTVILLEATGDMQYVLPLMLTLMAARFTGNVFNEGLYDIHIKLKNIPFLEPEVPSIAERHEIVAGQVMSAEVKCLRPVERAGVVYDLLRSCSHGTFPIVDTASGGTLYGTASRSMLCTLLQRRAFGPPDVLTEYDACESLGSRRLS-PLVQWDTIERAYPRYPTVDTIEVRGADRNSWLDLRPYANTAPYTVN 373          
BLAST of mRNA_P-littoralis_Contig65.136.1 vs. uniprot
Match: A0A7S2YMG2_9STRA (Chloride channel protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YMG2_9STRA)

HSP 1 Score: 221 bits (563), Expect = 1.650e-62
Identity = 131/357 (36.69%), Postives = 192/357 (53.78%), Query Frame = 1
Query:   10 ISSIMTTVAFFLPLAVGECRKVPTDLEGWSPAGVSSIDRLVTLNCHHG-EYNELGTLFLNEQDGMIKLLFHFGD-GALRWST-----LVLFAVVFMTLQCVTSGVWVSNGQFIPSILSGAAMGRGVGELLGRNPRAYSLVGGAGI---------LGGITRMTLSVTVMMVEASGWVLFVIPLMLVFIVARSVGNKINEGIYDTQISIKKMPFLEQEPPEETRTQNMRANQLMSKEVVCLRPIETVEAIMCLLRDYDHNCFPVVEDRDQRVLLGVVHRKNLAVLLNQRHFTEPSAQDPTSRPDVDL------PELSWSLLEESYPNYPDVKDIQIRPEDLHCLMDIAAYVQIGPHAIN 1014
            ++S+++ V F +P+  G+C  +PTD++ WS    S ++ LV   C  G EYNE+ +L   E D  IK LFHF + GA   ST     L +F + ++ L  +T G+ V +G F+PS+LSGAA GR  G LL +          +G          LGG+ RMT+S+TV+++EA+G + +V+PLM+  + AR  GN  NEG+YD  I +K +PFLE + P       + + Q+MS EV CLRP+E    +  LLR   H  FP+V+      L G   R  L  LL +R F  P   D       DL      P + W  +E+SYP YP V +I++R  D    +D+  Y    P+ +N
Sbjct:  316 VASVVSLVGFLMPVLWGKCTDLPTDMQDWSNQEKSLVEHLVPFRCKPGKEYNEVASLIFTEPDIAIKQLFHFREAGADDVSTFSSGALFMFFIPYIMLATLTYGIAVPSGLFVPSLLSGAAFGRLFGHLLHKLDHTSGTFADSGXXXXXXXXXXLGGMARMTISLTVILLEATGDMQYVLPLMITLMAARFTGNVFNEGLYDIHIHLKHIPFLEPDVPSVAERNEIVSGQVMSTEVKCLRPVERAGVVYDLLRSCSHGTFPIVDTASGGTLYGTASRYMLCTLLQRRAFGSPDVLDDYHDQGHDLGPRRLSPLVQWDTIEKSYPKYPTVDEIEMRDADRDGWLDLRPYANTAPYTVN 672          
BLAST of mRNA_P-littoralis_Contig65.136.1 vs. uniprot
Match: A0A836CAG3_9STRA (Chloride channel protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAG3_9STRA)

HSP 1 Score: 219 bits (559), Expect = 2.770e-62
Identity = 122/299 (40.80%), Postives = 178/299 (59.53%), Query Frame = 1
Query:  148 HGEYNELGTLFLNEQDGMIKLLFHFGDGALRWSTLVLFAVVFMTLQCVTSGVWVSNGQFIPSILSGAAMGRGVGELLGR----------NPRAYSLVGGAGILGGITRMTLSVTVMMVEASGWVLFVIPLMLVFIVARSVGNKINEGIYDTQISIKKMPFLEQEPPEETRTQNMRANQLMSKEVVCLRPIETVEAIMCLLRDYDHNCFPVVEDRDQRVLLGVVHRKNLAVLLNQRHFTEPSAQDPTSRPDVDLPELSWSLLEESYPNYPDVKDIQIRPEDLHCLMDIAAYVQIGPHAIN 1014
            H EYNE+ +LF  + D  I+ LFHF  GA     L LF + +  + C+T GV V +G F+PS+LSGAA+GR  G LL +          +   Y+L+G A  LGG+ RMT+S+TV+++EA+G + +V+PLML  + AR  GN  NEG+YD  I +K++PFLE E P       + A Q+M+  V CLRPIE V  +   LR+ +H+CFPVV+ +   VL+G V RK L VLL +RHF+         RP      +++  LE+ YP YP +++I I  +D    +D+  Y+   P+ I+
Sbjct:  334 HTEYNEVASLFFTDADTAIRQLFHFSSGA-----LFLFWLPYTAMACITYGVAVPSGLFVPSLLSGAALGRLCGHLLHKLAGGNGALFADSGTYALIGAAAALGGMARMTISLTVILLEATGDMQYVLPLMLTLMAARWTGNVFNEGLYDIHIRLKRLPFLEDELPALAAKGEVTAGQIMTTTVKCLRPIERVGYVYDALRNTEHDCFPVVDTQTGNVLMGTVLRKCLCVLLQRRHFSPNRGYSRGERP------VTFETLEKDYPRYPTIQEITIANDDRQSWLDLRPYISTAPYVID 621          
BLAST of mRNA_P-littoralis_Contig65.136.1 vs. uniprot
Match: A0A1E7FXI3_9STRA (Chloride channel protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FXI3_9STRA)

HSP 1 Score: 221 bits (563), Expect = 3.530e-62
Identity = 130/359 (36.21%), Postives = 187/359 (52.09%), Query Frame = 1
Query:    1 IMVISSIMTTVAFFLPLAVGECRKVPTDLEGWSPAGVSSIDRLVTLNCHHG-EYNELGTLFLNEQDGMIKLLFHFGDGA------LRWSTLVLFAVVFMTLQCVTSGVWVSNGQFIPSILSGAAMGRGVGELLGRNPRAYSLVGGAGI---------LGGITRMTLSVTVMMVEASGWVLFVIPLMLVFIVARSVGNKINEGIYDTQISIKKMPFLEQEPPEETRTQNMRANQLMSKEVVCLRPIETVEAIMCLLRDYDHNCFPVVEDRDQRVLLGVVHRKNLAVLLNQRHFTEPSAQDPTSRPDVD-----LPELSWSLLEESYPNYPDVKDIQIRPEDLHCLMDIAAYVQIGPHAIN 1014
            ++VIS  ++ V+F  PL  G C ++P D++ WS    + ++ LV   C  G EYNE+ +L   E D  IK LFHF +G            L LF V ++ +  V  G+ V +G F+PS+L+GAA GR  G LL +          +G          LGG+ RMT+S+TV+++EA+G + + +PLM+V + AR  GN  NEG+YD  I +K +PF+E E P       + A Q+MS EV CLRP+E    +  LLR   H  FP+V+      L G   R  L  LL +R F  P   D     D        P + W  +E +YP YP++ DI I   D +C +D+  Y    P+ IN
Sbjct:  375 VIVISLGVSVVSFATPLIWGRCTELPQDMQDWSNQEKNLVESLVPFQCEPGKEYNEVASLIFTEADTAIKQLFHFREGGGEDNSTFSSGALFLFFVPYIMMSSVVYGIAVPSGLFVPSLLAGAAFGRLCGHLLHKLDHTSGTFADSGXXXXXXXXXXLGGMARMTISLTVILLEATGDMQYTLPLMIVLMSARFTGNVFNEGLYDIHIHLKHIPFMEPEVPPVAERNEIVAGQVMSAEVKCLRPVERAGVVYDLLRSCQHGTFPIVDTASGGTLYGTASRDMLCTLLQRRAFGNPDVLDDYDNSDTLGTRRLSPLVQWDTIERAYPRYPNIDDIDIGEADRNCWLDLRPYANTAPYTIN 733          
BLAST of mRNA_P-littoralis_Contig65.136.1 vs. uniprot
Match: A0A7S0UJS8_9STRA (Chloride channel protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UJS8_9STRA)

HSP 1 Score: 219 bits (558), Expect = 8.710e-62
Identity = 130/359 (36.21%), Postives = 191/359 (53.20%), Query Frame = 1
Query:    1 IMVISSIMTTVAFFLPLAVGECRKVPTDLEGWSPAGVSSIDRLVTLNCH-HGEYNELGTLFLNEQDGMIKLLFHF----GDGALRWST--LVLFAVVFMTLQCVTSGVWVSNGQFIPSILSGAAMGRGVGELLGRNPRAYSLVGGAGI---------LGGITRMTLSVTVMMVEASGWVLFVIPLMLVFIVARSVGNKINEGIYDTQISIKKMPFLEQEPPEETRTQNMRANQLMSKEVVCLRPIETVEAIMCLLRDYDHNCFPVVEDRDQRVLLGVVHRKNLAVLLNQRHFTEPSAQDPTSRPDVDLPE-----LSWSLLEESYPNYPDVKDIQIRPEDLHCLMDIAAYVQIGPHAIN 1014
            +++IS  ++ V+F LP+  G C ++P D++ WS    + ++ LV   C    EYNE+ +L   E D  IK LFHF    GD    +S+  L LF V ++T+  V  G+ V +G F+PS+L+GAA GR  G LL +          +G          LGG+ RMT+S+TV+++EA+G + +V+PLM+V + AR  GN  NEG+YD  I +K +PF+E E P       + A Q+MS EV CLRP+E    +  LLR   H  FP+V+      L G   R  L  LL +R F  P   +     D   P      + W  +E +YP YP + D +I   D +C +D+  Y    P+ IN
Sbjct:  319 VIMISFGVSVVSFILPILWGRCTELPQDMQDWSNQEKNLVESLVPFQCDPEKEYNEVASLIFAEADTAIKQLFHFREAGGDDNATFSSGALFLFFVPYITMATVVYGIAVPSGLFVPSLLAGAAFGRLCGHLLHKLDHTSGTFADSGXXXXXXXXXXLGGMARMTISLTVILLEATGDMQYVLPLMIVLMSARFTGNVFNEGLYDIHIHLKHIPFMEPEVPTIAERNEIVAGQVMSAEVKCLRPVERAGVVYDLLRSCQHGTFPIVDTASGGTLYGTASRDMLCTLLQRRAFGNPDVLEEYDNSDTLGPRRLSPLVQWDTIERAYPRYPSIDDFEIGEADRNCWLDLRPYANTAPYTIN 677          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig65.136.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQH0_ECTSI2.910e-20587.57Chloride channel protein n=1 Tax=Ectocarpus silicu... [more]
A0A836CM41_9STRA1.350e-11551.90Chloride channel protein n=1 Tax=Tribonema minus T... [more]
A0A7S2XUS9_9STRA7.340e-6837.75Chloride channel protein n=1 Tax=Fibrocapsa japoni... [more]
A0A1Z5JAK4_FISSO2.190e-6637.50Chloride channel protein n=2 Tax=Fistulifera solar... [more]
A0A7S4S7C7_9STRA6.470e-6435.65Chloride channel protein n=3 Tax=Ditylum brightwel... [more]
A0A7S1D5H2_CYCTE1.330e-6336.94Chloride channel protein n=1 Tax=Cyclophora tenuis... [more]
A0A7S2YMG2_9STRA1.650e-6236.69Chloride channel protein n=1 Tax=Amphiprora paludo... [more]
A0A836CAG3_9STRA2.770e-6240.80Chloride channel protein n=1 Tax=Tribonema minus T... [more]
A0A1E7FXI3_9STRA3.530e-6236.21Chloride channel protein n=1 Tax=Fragilariopsis cy... [more]
A0A7S0UJS8_9STRA8.710e-6236.21Chloride channel protein n=1 Tax=Pseudo-nitzschia ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig65contigP-littoralis_Contig65:684295..688769 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LQH0
Preferred nameCLCN6
PFAMsCBS,Voltage_CLC
Model size1023
Max annot lvl2759|Eukaryota
KEGG koko:K05015,ko:K05016
KEGG TC2.A.49.3.3,2.A.49.3.4
Hectar predicted targeting categorysignal peptide
GOsGO:0000323,GO:0003008,GO:0003674,GO:0005215,GO:0005216,GO:0005244,GO:0005247,GO:0005253,GO:0005254,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005764,GO:0005765,GO:0005768,GO:0005770,GO:0005773,GO:0005774,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006821,GO:0006884,GO:0007039,GO:0007154,GO:0007165,GO:0007600,GO:0008150,GO:0008152,GO:0008308,GO:0008361,GO:0008509,GO:0009056,GO:0009057,GO:0009268,GO:0009605,GO:0009612,GO:0009628,GO:0009987,GO:0010008,GO:0012505,GO:0015075,GO:0015103,GO:0015108,GO:0015267,GO:0015291,GO:0015297,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0016043,GO:0019538,GO:0019725,GO:0022803,GO:0022804,GO:0022832,GO:0022836,GO:0022838,GO:0022839,GO:0022857,GO:0023052,GO:0030163,GO:0031090,GO:0031224,GO:0031410,GO:0031974,GO:0031981,GO:0031982,GO:0032501,GO:0032535,GO:0034220,GO:0042592,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0050789,GO:0050794,GO:0050877,GO:0050896,GO:0050954,GO:0050975,GO:0051179,GO:0051234,GO:0051716,GO:0055085,GO:0065007,GO:0065008,GO:0070013,GO:0071704,GO:0071840,GO:0090066,GO:0097708,GO:0098588,GO:0098656,GO:0098660,GO:0098661,GO:0098805,GO:0098852,GO:1901564,GO:1901565,GO:1901575,GO:1902476,GO:1905146
Exons7
Evalue1.31e-205
EggNOG OGsCOG0038@1|root,KOG0474@2759|Eukaryota
DescriptionChloride Channel
Cds size1020
COG categoryP
BRITEko00000,ko01009,ko04040
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig65.136.1prot_P-littoralis_Contig65.136.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig65 684298..688769 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791360.9002628-UTR-P-littoralis_Contig65:684294..6842971680791360.9002628-UTR-P-littoralis_Contig65:684294..684297Pylaiella littoralis U1_48UTRP-littoralis_Contig65 684295..684297 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791360.9143353-CDS-P-littoralis_Contig65:684297..6844591680791360.9143353-CDS-P-littoralis_Contig65:684297..684459Pylaiella littoralis U1_48CDSP-littoralis_Contig65 684298..684459 +
1680791360.9273815-CDS-P-littoralis_Contig65:684924..6851141680791360.9273815-CDS-P-littoralis_Contig65:684924..685114Pylaiella littoralis U1_48CDSP-littoralis_Contig65 684925..685114 +
1680791360.9369495-CDS-P-littoralis_Contig65:685895..6860321680791360.9369495-CDS-P-littoralis_Contig65:685895..686032Pylaiella littoralis U1_48CDSP-littoralis_Contig65 685896..686032 +
1680791360.9508896-CDS-P-littoralis_Contig65:686654..6867681680791360.9508896-CDS-P-littoralis_Contig65:686654..686768Pylaiella littoralis U1_48CDSP-littoralis_Contig65 686655..686768 +
1680791360.9623744-CDS-P-littoralis_Contig65:687530..6877151680791360.9623744-CDS-P-littoralis_Contig65:687530..687715Pylaiella littoralis U1_48CDSP-littoralis_Contig65 687531..687715 +
1680791360.97468-CDS-P-littoralis_Contig65:688189..6882551680791360.97468-CDS-P-littoralis_Contig65:688189..688255Pylaiella littoralis U1_48CDSP-littoralis_Contig65 688190..688255 +
1680791360.9838383-CDS-P-littoralis_Contig65:688603..6887691680791360.9838383-CDS-P-littoralis_Contig65:688603..688769Pylaiella littoralis U1_48CDSP-littoralis_Contig65 688604..688769 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig65.136.1

>prot_P-littoralis_Contig65.136.1 ID=prot_P-littoralis_Contig65.136.1|Name=mRNA_P-littoralis_Contig65.136.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=340bp
MVISSIMTTVAFFLPLAVGECRKVPTDLEGWSPAGVSSIDRLVTLNCHHG
EYNELGTLFLNEQDGMIKLLFHFGDGALRWSTLVLFAVVFMTLQCVTSGV
WVSNGQFIPSILSGAAMGRGVGELLGRNPRAYSLVGGAGILGGITRMTLS
VTVMMVEASGWVLFVIPLMLVFIVARSVGNKINEGIYDTQISIKKMPFLE
QEPPEETRTQNMRANQLMSKEVVCLRPIETVEAIMCLLRDYDHNCFPVVE
DRDQRVLLGVVHRKNLAVLLNQRHFTEPSAQDPTSRPDVDLPELSWSLLE
ESYPNYPDVKDIQIRPEDLHCLMDIAAYVQIGPHAINGK*
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mRNA from alignment at P-littoralis_Contig65:684295..688769+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig65.136.1 ID=mRNA_P-littoralis_Contig65.136.1|Name=mRNA_P-littoralis_Contig65.136.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4475bp|location=Sequence derived from alignment at P-littoralis_Contig65:684295..688769+ (Pylaiella littoralis U1_48)
ATTATGGTCATCAGCAGCATCATGACGACGGTGGCGTTTTTCCTCCCCCT CGCCGTCGGAGAGTGTCGCAAAGTGCCGACAGACCTTGAGGGGTGGTCCC CGGCAGGGGTATCGAGCATTGATCGCCTCGTCACGCTGAACTGCCACCAC GGAGAGTACAACGAGGTACGTGCTGGCGCTACCGTACAATAAAATGCTAC ATAGTATAGGACTGCTGCTGTCTTCGCCTCGGAGATGTGGTGCAATCCAT AAGCAGCAGTGACGGCGCATGTTGTGGCACTTCATCGGCTGGAAAATTAT TTGGGCGACAATATCATAATCGTTTTTTCGCGCTACTTGAATACCAGAAC TTTCGTTTACGTGTCTCCCTCTTTCGTTAGCGTACAAACCTTACTTTAAG GGGAAACTGTCCCCTGTACAATCAGGTCCTCAGTGGCACCGTTTCCAAAT CACCATTTCCCCCCCACCGGCGGCGTGCATCCGTAGCACTGTCTTCATTC AACAGTCATTGGCCTCAACGACGTGGGATACATATGGTACAAACGCCCAA CCCTTGCTGCCCACCTTGCGTGTTTGCTCCGTGACCCTTTCGTGATACCA CAATCTTCCCCCTTCCCCAATCTTCTCCAGCTGGGAACTTTGTTCCTGAA CGAGCAAGACGGGATGATCAAGCTCCTCTTCCACTTCGGCGACGGGGCGC TGCGGTGGTCCACGTTGGTCTTGTTTGCCGTTGTGTTCATGACCTTGCAG TGCGTGACGAGCGGCGTGTGGGTATCGAACGGCCAGTTCATCCCCTCCAT TCTGTCGGGCGCGGCCATGGGTGAGTGAAGTGGGATGGCACCGAAGATGC TTGACGCCTCCACACGGTTTATCAATGAATACTGTAATGTAGAGGAGTGA TGTGCACTGATGCTGCGATCTCGCGCTGACTAACAACCAGACACCAACAA TGACATATCTCGGGGTGGTTGACCTGGCTACGCGAGGTTGTTAGCGGAGG TCGGTCGGGACCCGAGTCACGTCACCCCCGCCGTCTCGTCTGGCACCATG GACGGCGTGTTTTGGAGCAAGAAAAACAAAGCGTATTCTGCTCTCTATGC CATGTCCTCCTTCGCACACCATAACCATTGGTTATCCCAAGACATTGAGC CTCGCGTTACAATCCAGGACACGTTTGGTATCATGAACTACCACTGTGTA TCCACCTCCGACACACCCTCGCGATTAAACGATGGCGTGCGATAAACGCA ATGAATGGTAGTGTTTCATTCGGGCTATAGGTTTGCACTTTTCCGCTGCC CCACCCCCTCCTCCCCCTGCACACATTCGATCTTCAAGCAACGTTATCGT CGCAAAGAAGAGAGAGCCTACATTAATTCCATGGGGCTAAAGCGCAAACC GCAGTGTTTTTCCTACCCTTCGAAGATCACATGCAGCATCGATTTTGCCA CACTTTACCACGCAACACCCACACACGGATCGACGGCATGTCGCACCAAA ACATCCATTAAATTTGTATGTACCATCGTTCAGTAGTACAGATCAACGGC AGCCCCTTTGTTGGCGAACATTGTCGAAAACTGTGCGCATTTGTTTGACA GGCCGGGGCGTCGGAGAATTGTTAGGAAGAAACCCGAGGGCCTACTCTCT GGTCGGAGGCGCGGGAATCCTGGGAGGCATCACGCGGATGACTTTGAGCG TGACTGTCATGATGGTAGAGGCATCTGGATGGGTGTTGGTAAGTGCATGT ACTTTGCTCCCCACTTTTCGTTCCGTCAAGCGTTACAATTTACTTTGATG GTGGCAGGAGAAGAATAATACTTGTCGTAGTTTTCTAACGGGATGAATGA TTGTTATGTGAATCAACCGACGAGTACGGGATCTAGGGAGGTTACCACAG GCAAAACTATTTCAACAGACTATACACTCCTGTAGTTCCAATTTTCAAGA GTGGCTTGCCTGTTTCGTTCGCCATTCGTTGTCTTCACACAGCTTTAGGT TCGCCAGTACTCTACAGTAACTCCAAACAGAGACGCGTGCCCAATACGGG CAAATAAACCAGCCAGGAGTTTTGCAGTGCAAGAAGGCGGCCGCGTGAAC GAGGTTCTCGTCCGCGTGTCCCCCCGGTCCCGTGAGGGGGGGGGTTGTAT GCTCATGTTTGTATCGCCTGGCATATATATTCGCTCGCACAAAATATGTC ACATATGCTGCCGGAAGCAAAGTCTGGCAATTCCATCAATCAAGATGGAC AATCTGGAAGGCAGCAGGGGAAAATTCCCGACTTTTCGCGTCATCTCCGT GTCTGTCTTTGCTTCTTCGTCCCTCATCCCTTGCCTTCCTGCACCCCCCC CCCCGTCCAGTTCGTGATCCCTTTGATGCTCGTTTTCATCGTGGCAAGAT CAGTGGGAAACAAAATCAACGAGGGAATTTACGACACGCAGATTAGCATC AAGAAGATGCCTTTCCTTGAGCAGGTGAGCAACAGCGGCGCGCTGCACAA CACACACACGCACACACATACAAACCATTAGAACTGCGCTGGATGCATTA TACTTCATCGTAGCTTCGCATTTATTCGTCGGCGTCCATGTATGGTCGCC AGAGGTAATTAATGCAGACCAGCGGCAACGGAACAATCATCCCGCTGCTC CGTTCCTCGCGTTGGAGGAATGGTGGTGGTGGAAAAATCAAGCTTGTTTT GTGATCTATCTCCTGTTTTAGAGGAGAACTCGAAGAGAGTCAGGATAATC GTCCCGCGGAAGGGAGAGGGTTCCTCGCGCCCATGTACGGCACCTTTGAG ACTAGACTTGCATATCTGTAAGCAGCGTTGCATGTGTAGTCTATCATACA GAAGTACTAGCAGAGGAATCTAATTGGAAACTCGCCTCTTGTGTGGTTCC TTCAAGGATGACTTTGCTGCACTTCCAAGATTTTCGGATCAGGAAATATG TTACCGCATGTTATTTCCGGTAGAATCGGTGACCAGCACAAAACGAACGC TGTTTCTGCCCAGTTTCAAGTGGAGCCACCCGCACTACTATATGAGCACT CTAATTCACACCGAACCCCTAACAAGACGAACACGCCACGCACGCATTTA CTTGGTGTTGAACAACGGCTTCTTCCTCTTCATAGTCGGTGGCTGGACCA CTTCACAACCCACCACAACCCTGAGTACATTTCTGGCGCGGTATCCACAC GTCGACCGCCTCCACAAATAATATTGCAACGCGCAGGAGCCTCCGGAAGA GACTCGAACACAGAACATGCGTGCGAACCAGCTCATGTCGAAGGAAGTGG TGTGCTTGCGGCCGATCGAGACGGTGGAGGCGATCATGTGCCTCCTTCGC GACTACGACCACAACTGTTTTCCGGTGGTCGAAGACCGGGATCAGCGGGT GCTCCTCGGAGTGGTCCACAGGTAAGGTGCTGCAACAGCAGTACAGCAGT GAAGATTGATTATGGTGCCCCCCTGTCACCAGGTGGATTGTGTCACGAGA TGTTCGAAGGTACGCAAGGGCCGTACTGCTGTAGTACCGGCAGGATGTGT CTTCTCCGTTCGGTGATCTCCCTCCCTTGAGCAATACTACTCGTACGAGG CATGTTATCTCAGACGGTATTGATATCGTCACTCCCTCTCTCTCATATCA CTTCAACAGAAGTTTCGAACAGTGTGTAAGGTTTCACCGATCAAATATCC GGGATTGAGTGCCCCTGCTGGTACACTTGAGCCAGCTTTGATTGGAACGG TTATGGTCTACAGTAAAATAGTCGAAGGATATGGAGTAGGGGTGGTGAAT CAACAGAGAGGTGTCTGTCTGCTGTTTCCCTTTGCATTTCGATCAAGGCT CCGGCATAAACATACTGATGCGCTGCACTCTGGTCACGCGCACAGGAAAA ACCTGGCGGTACTCCTCAACCAACGGCACTTCACGGAACCTTCCGCTCAA GACCCTACCAGGTACGGGGGCTAACGTAATCCTAGCATTTATCGTGGAGA TGAAGTTACTGTAGTTTTTGCGTGGACCGACTGATAACGTTCACCGCAAC AGCTAATGCCGTCGCTGACACTCCACCACTTGGTCGGATCAGTGTTATTG TTCGCGTACAAGCGGAAGTTTTTATTTCCTACACTGTAATGTACGTGTTT GCTCAAGCGAGAGTTTATTTCGACAACAACGGTGGCCGTTTTGTGCACCC GAGTGCCCCATTTGTGCAAAACTACTGCTACAGCACATTTCGCGGAGTAC GTACCTGAACGGACCTCGCCTGACCTCGGCCTATATCCATATTTCTCCGA CAAATCAAGCAGGCCGGATGTCGATCTGCCGGAGCTGTCGTGGAGCCTGC TGGAAGAGTCATACCCCAACTACCCCGATGTGAAAGACATCCAGATAAGG CCCGAGGACCTGCACTGCCTCATGGACATCGCGGCGTACGTGCAGATCGG ACCTCACGCCATTAATGGCAAGTAA
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Coding sequence (CDS) from alignment at P-littoralis_Contig65:684295..688769+

>mRNA_P-littoralis_Contig65.136.1 ID=mRNA_P-littoralis_Contig65.136.1|Name=mRNA_P-littoralis_Contig65.136.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1020bp|location=Sequence derived from alignment at P-littoralis_Contig65:684295..688769+ (Pylaiella littoralis U1_48)
ATGGTCATCAGCAGCATCATGACGACGGTGGCGTTTTTCCTCCCCCTCGC
CGTCGGAGAGTGTCGCAAAGTGCCGACAGACCTTGAGGGGTGGTCCCCGG
CAGGGGTATCGAGCATTGATCGCCTCGTCACGCTGAACTGCCACCACGGA
GAGTACAACGAGCTGGGAACTTTGTTCCTGAACGAGCAAGACGGGATGAT
CAAGCTCCTCTTCCACTTCGGCGACGGGGCGCTGCGGTGGTCCACGTTGG
TCTTGTTTGCCGTTGTGTTCATGACCTTGCAGTGCGTGACGAGCGGCGTG
TGGGTATCGAACGGCCAGTTCATCCCCTCCATTCTGTCGGGCGCGGCCAT
GGGCCGGGGCGTCGGAGAATTGTTAGGAAGAAACCCGAGGGCCTACTCTC
TGGTCGGAGGCGCGGGAATCCTGGGAGGCATCACGCGGATGACTTTGAGC
GTGACTGTCATGATGGTAGAGGCATCTGGATGGGTGTTGTTCGTGATCCC
TTTGATGCTCGTTTTCATCGTGGCAAGATCAGTGGGAAACAAAATCAACG
AGGGAATTTACGACACGCAGATTAGCATCAAGAAGATGCCTTTCCTTGAG
CAGGAGCCTCCGGAAGAGACTCGAACACAGAACATGCGTGCGAACCAGCT
CATGTCGAAGGAAGTGGTGTGCTTGCGGCCGATCGAGACGGTGGAGGCGA
TCATGTGCCTCCTTCGCGACTACGACCACAACTGTTTTCCGGTGGTCGAA
GACCGGGATCAGCGGGTGCTCCTCGGAGTGGTCCACAGGAAAAACCTGGC
GGTACTCCTCAACCAACGGCACTTCACGGAACCTTCCGCTCAAGACCCTA
CCAGCAGGCCGGATGTCGATCTGCCGGAGCTGTCGTGGAGCCTGCTGGAA
GAGTCATACCCCAACTACCCCGATGTGAAAGACATCCAGATAAGGCCCGA
GGACCTGCACTGCCTCATGGACATCGCGGCGTACGTGCAGATCGGACCTC
ACGCCATTAATGGCAAGTAA
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