prot_P-littoralis_Contig65.18.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig65.18.2
Unique Nameprot_P-littoralis_Contig65.18.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length634
Homology
BLAST of mRNA_P-littoralis_Contig65.18.2 vs. uniprot
Match: A0A6H5L7R8_9PHAE (ERCC4 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L7R8_9PHAE)

HSP 1 Score: 601 bits (1549), Expect = 4.030e-207
Identity = 358/597 (59.97%), Postives = 407/597 (68.17%), Query Frame = 0
Query:   44 CACEANVPLLVELQSFDEECLRTGKVKLRHGLMRAMKSLKRYPLPVTTEKEACALEGVGGFTARRMLRGLLPAAAPATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGSRKTNTDGSRACGTSALSSG-AGCRASSNNSASGLLRMNLRVDGGGNSRGVGSGGT-LSLASNFSALRGDVADGGGGGGVQTPDVTPKRPTSRARREEIDGGATAGGQPFQSKAPRYFTGYWEAWLLVDNRETAFMSMQSTLLQKGIPCETRQLPLGDMLWIARRKDDPTSEVLLGYIVERKTVSDLASSIIDGRYDEQKRRLKLSGLRRPIYLVEGNINHQGILAPSTLRTALASSQTCGSLAVVQCDSLRDSVDFLARTHRHIAALLSDPCRCSSGSGGGDELWPSGDAAGGVRVGGGGAGPGVGAMLRPAMTYGEYAQSCAKHAGETTVKQLLGAMARQVPGCSAARAQALVQEFESPLGLMLAFERAAEGAYEGHPGVDDATRCKRVDALLTDLECRGRAGTNKLPQPMRRLLCRLFLGESAGXXXXXXXXXXXXXXXPAAD------RQESSSVVCFSGSDPYRDFDVEPMNQDDPY 632
            CAC +N PLLVEL+S DEECLRTGKVKLRHGLMRAMKSLKRYPLP+TTEKEACALEGVG FTARRMLRGL PA                                        GG+RK++    ++ GTS++++  AG R  S+ ++  LLRMNLRV   G+S    +GG  LSLASNF+ALR       GGG   TPDVTPKRPTSRAR+EE  G          SKAP +F+G WEAWL+VDNRE  FMS+QS+LLQKGI CETRQLPLGDMLWIAR++DDPTSEVLLGYIVERKT SDLASSIIDGRY+EQKRRLKLSGLRR IYLVEGN+NHQ  LAP+ LRTAL SSQ CG LAVVQCD LRD+V+FLARTHRHIA+LL   CR  +G      +  S + +GG             AMLRPAMTYGEYAQ CAK AG TTV+Q+LGAM RQ PGCSAARA+A+V+ F+SPLGLMLA ERAA G  +G  G DDA R KR DALL  L C G AGTNKLPQP+RRLLCRLFLG+S                 P         R  S++ +   G      +DVEPMNQDDPY
Sbjct:   44 CACVSNGPLLVELKSLDEECLRTGKVKLRHGLMRAMKSLKRYPLPITTEKEACALEGVGSFTARRMLRGLPPAGPEPENSSGVRRTDEENIEPSGSSSSRG------------GGARKSSN---KSTGTSSVTNADAGSRLPSDTNS--LLRMNLRV---GSSATTTTGGRPLSLASNFAALR-------GGGEETTPDVTPKRPTSRARKEEASGETAR-----SSKAPSFFSGQWEAWLVVDNREHEFMSVQSSLLQKGIRCETRQLPLGDMLWIARKRDDPTSEVLLGYIVERKTASDLASSIIDGRYEEQKRRLKLSGLRRRIYLVEGNLNHQEQLAPAALRTALVSSQACGGLAVVQCDGLRDTVNFLARTHRHIASLLELSCRREAGL---SPVRGSRECSGGR------------AMLRPAMTYGEYAQGCAKRAGSTTVRQVLGAMVRQAPGCSAARAEAIVRAFDSPLGLMLALERAASG--DGIAG-DDAARMKRADALLGGLVCSGGAGTNKLPQPLRRLLCRLFLGDSVDDEGAGASAGGVGAAGPPTAAGGYGRRGHSNADLSVGGPYCVDGWDVEPMNQDDPY 590          
BLAST of mRNA_P-littoralis_Contig65.18.2 vs. uniprot
Match: A0A836CKB8_9STRA (Restriction endonuclease type II-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKB8_9STRA)

HSP 1 Score: 186 bits (473), Expect = 1.090e-50
Identity = 122/306 (39.87%), Postives = 160/306 (52.29%), Query Frame = 0
Query:  276 GYWEAWLLVDNRETAFMSMQSTLLQKGIPCETRQLPLGDMLWIARRKDDPT----SEVLLGYIVERKTVSDLASSIIDGRYDEQKRRLKLSGLRRPIYLVEGNINHQGILAPSTLRTALASSQTCGSLAVVQCDSLRDSVDFLARTHRHIAALLSDPCRCSSGSGGGDELWPSGDAAGGVRVGGGGAGPGVGAMLRPAMTYGEYAQSCAKHAGETTVKQLLGAMARQVPGCSAARAQALVQEFESPLGLMLAFERAAEGAYEGHPGVDDATRCKRVDALLTDLECRGRAGTNKLPQPMRRLLCRLF 577
            G W   L+ D RE    + Q+ +L   + CE R LPLGDMLW+AR  D  +     EVLLGYIVERKT SDL SS++DGR+ EQK R+   GL R IYLVEG I H   L P+ LRTA+A +Q    + V+   ++ +SV  L R HRHIAA L   CR  + S                        PG G  +RP M+  +Y   C K   +  V+ + G   RQV GCSAARA A++ E+ +PL  MLA E A E           + RC  + A +   E   R    KL +P++  LC+L+
Sbjct:   11 GIWTPVLIFDTREEHAQASQAAVLNANMLCEVRSLPLGDMLWVARNMDRQSPSYLQEVLLGYIVERKTASDLGSSMVDGRFHEQKHRMARHGLGRVIYLVEGPITHTTRLTPAHLRTAMAHTQAQDGMTVLWTANVTESVAHLQRVHRHIAASLEAACRGITASA-----------------------PGTG--VRPIMSMDQYRAQCGK-GKDGDVRYVFGCQLRQVYGCSAARAAAILNEYPTPLDFMLAMEAAGE-----------SERCLELLAGIKG-EPGARMAEAKLTKPLQAALCKLY 278          
BLAST of mRNA_P-littoralis_Contig65.18.2 vs. uniprot
Match: A0A7S3XK47_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XK47_HETAK)

HSP 1 Score: 135 bits (341), Expect = 4.250e-32
Identity = 98/297 (33.00%), Postives = 139/297 (46.80%), Query Frame = 0
Query:  294 MQSTLLQKGIPCETRQLPLGDMLWIAR---------------------RKDDPTSEVL-----------LGYIVERKTVSDLASSIIDGRYDEQKRRLKLSGLRRPIYLVEGNINHQGILAPSTLRTALASSQTCGSLAVVQCDSLRDSVDFLARTHRHIAALLSDPCRCSSGSGGGDELWPSGDAAGGVRVGGGGAGPGVGAMLRPAMTYGEYAQSCAKHAGETTVKQLLGAMARQVPGCSAARAQALVQEFESPLGLMLAFERAAEGAYEGHPGVDDATRCKRVDALLTDLECRG 558
            +Q+ LL  G+ CE  QL +GDM+W AR                     +K   T+ +L           LG++VERKT  DLA SIIDGRY EQK RLK SGL +  YLVEG+++ Q +L   +LRTA+AS+      +V +C +L +SV +LARTH  +A  L      +           SGD     +             + P MTY  Y   C K   +  V+ + G   +Q PG S  + QA+++ F +P  LM  ++R  +   EGH            D +  DL  +G
Sbjct:    2 VQAKLLAVGVACEVGQLAVGDMVWAARWRRPGWHADIPLTQTLNQPQKKKSKSTATILENLHKNEELFVLGFVVERKTAEDLAKSIIDGRYAEQKVRLKKSGLSKVTYLVEGSLSGQDVLPTKSLRTAMASTLIQHGFSVQRCANLDESVRWLARTHHQVARQLGYAVAAAQ----------SGDPLDSFKA------------VLPVMTYRHYHDQCGKLKAQK-VQDIFGMQLKQFPGMSVGKIQAILERFPTPQRLMDGYKRYVD---EGHD----------ADHMFVDLVAKG 262          
BLAST of mRNA_P-littoralis_Contig65.18.2 vs. uniprot
Match: A0A7J6SJN9_PEROL (Crossover junction endonuclease mus81 n=2 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6SJN9_PEROL)

HSP 1 Score: 135 bits (339), Expect = 2.860e-29
Identity = 108/269 (40.15%), Postives = 130/269 (48.33%), Query Frame = 0
Query:  261 AGGQPF----QSKAPRYFTGYWEAWLLVDNRETAFMSMQSTLLQKGIPCETRQLPLGDMLWIARRKDDPTSEVLLGYIVERKTVSDLASSIIDGRYDEQKRRL--KLSGLRRPIYLVEGNIN----HQGILAPSTLRTALASSQTCGSLAVVQCDSLRDSVDFLARTHRHIAALLSDPCRCSSGSGGGDELWPSGDAAGGVRVGGGGAGPGVGAMLRPAMTYGEYAQSCAKHAGETTVKQLLGAMARQVPGCSAARAQALVQEFESPLG 519
            AG QP     + +      G WEA LLVD RE+A M   S L   GI  E R LP+ D LW+ RR  D   EV+LG   ERKT  DL++SIIDGRYDEQK RL  K   LRR  YL+EG++     H   L  +TLRTAL  ++  G   VV   S+R S   LA  H  IA     P          DE                            + TY  +A SCAK  G  TV+ L GAM RQVPGC A   +AL++  E  +G
Sbjct:  236 AGSQPLAILVEPQPSPAIPGPWEAVLLVDVRESALMKELSAL---GIRAEARSLPITDFLWLMRRSTDG-KEVVLGVGGERKTWQDLSASIIDGRYDEQKYRLASKAIALRRIFYLLEGDVERSHGHARTLPSATLRTALCHTRIIGGFGVVNTPSVRHSAKLLAAMHNVIAR--QKPV---------DE--------------------------DKSTTYDAFASSCAKTVG-ATVRDLTGAMLRQVPGCGAEATKALLEITEKRMG 462          
BLAST of mRNA_P-littoralis_Contig65.18.2 vs. uniprot
Match: A0A2R5FYX3_9STRA (Crossover junction endonuclease MUS81 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5FYX3_9STRA)

HSP 1 Score: 132 bits (332), Expect = 5.930e-29
Identity = 93/261 (35.63%), Postives = 132/261 (50.57%), Query Frame = 0
Query:  278 WEAWLLVDNRETAFMS---MQSTLLQKGIPCETRQLPLGDMLWIARRK--DDPTSEVLLGYIVERKTVSDLASSIIDGRYDEQKRRLKLSGLRRPIYLVEGNINHQGILAPSTLRTALASSQTCGSLAVVQCDSLRDSVDFLARTHRHIAALLSDPCRCSSGSGGGDELWPSGDAAGGVRVGGGGAGPGVGAMLRPAMTYGEYAQSCAKHAGETTVKQLLGAMARQVPGCSAARAQALVQEFESPLGLMLAFERAAEGAYE 533
            WE  LL+D RE +       QS L + G+  E R L LGD +WI RRK  D  T E +L YI+ERK VSDL +SI DGRY EQK RL+  GL R IYLVEG  +HQ IL P  LRTA+A +Q      V+   ++ ++V++L+R HR I +      + +  SG   + W   +      V G          LR                   +V ++ GA  +Q+ G S  RA A+++++ +P  L+  F+   +   E
Sbjct:  300 WELVLLIDMREGSGRDKTIFQSKLFEHGVNIEKRVLSLGDAMWIVRRKLMDGKTEEYVLDYIIERKEVSDLGTSIKDGRYSEQKYRLQRCGLSRVIYLVEGEPSHQSILKPQALRTAMAETQVRDGFTVMHVLNVMETVEYLSRMHRLIESSTVATSQ-NKWSGPARDSWRRYENFHAANVKG---------KLR-------------------SVNEIFGAQLKQIKGFSGMRAAAILEKYPTPRSLLELFDEGLKNVPE 531          
BLAST of mRNA_P-littoralis_Contig65.18.2 vs. uniprot
Match: C5KCI6_PERM5 (Crossover junction endonuclease MUS81, putative n=1 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5KCI6_PERM5)

HSP 1 Score: 130 bits (328), Expect = 1.270e-28
Identity = 99/250 (39.60%), Postives = 124/250 (49.60%), Query Frame = 0
Query:  272 RYFTGYWEAWLLVDNRETAFMSMQSTLLQKGIPCETRQLPLGDMLWIARRKDDPTSEVLLGYIVERKTVSDLASSIIDGRYDEQKRRL--KLSGLRRPIYLVEGNIN----HQGILAPSTLRTALASSQTCGSLAVVQCDSLRDSVDFLARTHRHIAALLSDPCRCSSGSGGGDELWPSGDAAGGVRVGGGGAGPGVGAMLRPAMTYGEYAQSCAKHAGETTVKQLLGAMARQVPGCSAARAQALVQEFE 515
            R   G WEA  LVD RE+A +     LL  GI  E R LP+ D LW+ RR  D   E+LLG   ERKT  DL++SIIDGRYDEQK RL  K + LRR  YL+EG++     +   L  +TLRTAL  ++  G   VV   S+R S   LA  H  I+                 + W        V  G              + TY  +A SCAK  G  T++ L GAM RQVPGC A   +AL++  E
Sbjct:  273 RAMPGSWEAVFLVDVRESALLK---ELLALGIRAEARSLPITDFLWLMRRSSDG-KELLLGVGGERKTWQDLSASIIDGRYDEQKYRLASKATALRRIFYLIEGDVERSHGYAKTLPSATLRTALCHTRVIGGFGVVNTPSVRQSAKLLADMHNIISR----------------QPW--------VDEGN-------------STTYESFASSCAKTVG-ITIRDLTGAMLRQVPGCGAEATKALLEVTE 480          
BLAST of mRNA_P-littoralis_Contig65.18.2 vs. uniprot
Match: A0A7J6PLL1_PEROL (Crossover junction endonuclease mus81 n=2 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6PLL1_PEROL)

HSP 1 Score: 132 bits (333), Expect = 1.630e-28
Identity = 107/269 (39.78%), Postives = 128/269 (47.58%), Query Frame = 0
Query:  261 AGGQPFQS----KAPRYFTGYWEAWLLVDNRETAFMSMQSTLLQKGIPCETRQLPLGDMLWIARRKDDPTSEVLLGYIVERKTVSDLASSIIDGRYDEQKRRL--KLSGLRRPIYLVEGNIN----HQGILAPSTLRTALASSQTCGSLAVVQCDSLRDSVDFLARTHRHIAALLSDPCRCSSGSGGGDELWPSGDAAGGVRVGGGGAGPGVGAMLRPAMTYGEYAQSCAKHAGETTVKQLLGAMARQVPGCSAARAQALVQEFESPLG 519
            AG QP  S    +      G WEA LLVD RE+A M   S L   GI  E R LP+ D LW+ RR  D   E++ G   ERKT  DL++SIIDGRYDEQK RL  K   LRR  YL+EG++     H   L  +TLRTAL  ++  G   VV   S+R S   LA  H  IA     P          DE                            + TY  +A SCAK  G  TV+ L GAM RQVPGC A   +AL+   E  +G
Sbjct:  287 AGSQPLASLVEPQPSPAIPGPWEAVLLVDVRESALMKELSAL---GIRAEARSLPITDFLWLMRRSTDG-KELVFGVGGERKTWQDLSASIIDGRYDEQKYRLASKAIALRRIFYLLEGDVERSHGHARTLPSATLRTALCHTRIIGGFGVVNTPSVRHSAKLLAAMHNVIAR--QKPV---------DE--------------------------DKSTTYDSFASSCAKTVG-ATVRDLTGAMLRQVPGCGAEATKALLDITEKRMG 513          
BLAST of mRNA_P-littoralis_Contig65.18.2 vs. uniprot
Match: A0A7J6RET3_PEROL (Crossover junction endonuclease mus81 n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6RET3_PEROL)

HSP 1 Score: 132 bits (333), Expect = 1.690e-28
Identity = 106/262 (40.46%), Postives = 127/262 (48.47%), Query Frame = 0
Query:  261 AGGQPF----QSKAPRYFTGYWEAWLLVDNRETAFMSMQSTLLQKGIPCETRQLPLGDMLWIARRKDDPTSEVLLGYIVERKTVSDLASSIIDGRYDEQKRRL--KLSGLRRPIYLVEGNIN----HQGILAPSTLRTALASSQTCGSLAVVQCDSLRDSVDFLARTHRHIAALLSDPCRCSSGSGGGDELWPSGDAAGGVRVGGGGAGPGVGAMLRPAMTYGEYAQSCAKHAGETTVKQLLGAMARQVPGCSAARAQALVQ 512
            AG QP     + +      G WEA LLVD RE+A M   S L   GI  E R LP+ D LW+ RR  D   EV+LG   ERKT  DL++SIIDGRYDEQK RL  K   LRR  YL+EG++     H   L  +TLRTAL  ++  G   VV   S+R S   LA  H  IA     P          DE                            + TY  +A SCAK  G  TV+ L GAM RQVPGC A   +AL++
Sbjct:  753 AGSQPLAILVEPQPSPAIPGPWEAVLLVDVRESALMKELSAL---GIRAEARSLPITDFLWLMRRSTDG-KEVVLGVGGERKTWQDLSASIIDGRYDEQKYRLASKAIALRRIFYLLEGDVERSHGHARTLPSATLRTALCHTRIIGGFGVVNTPSVRHSAKLLAAMHNVIAR--QKPV---------DE--------------------------DKSTTYDAFASSCAKTVG-ATVRDLTGAMLRQVPGCGAEATKALLE 972          
BLAST of mRNA_P-littoralis_Contig65.18.2 vs. uniprot
Match: A0A7J6ME02_PEROL (Crossover junction endonuclease mus81 n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6ME02_PEROL)

HSP 1 Score: 130 bits (328), Expect = 6.410e-28
Identity = 105/262 (40.08%), Postives = 127/262 (48.47%), Query Frame = 0
Query:  261 AGGQPF----QSKAPRYFTGYWEAWLLVDNRETAFMSMQSTLLQKGIPCETRQLPLGDMLWIARRKDDPTSEVLLGYIVERKTVSDLASSIIDGRYDEQKRRL--KLSGLRRPIYLVEGNIN----HQGILAPSTLRTALASSQTCGSLAVVQCDSLRDSVDFLARTHRHIAALLSDPCRCSSGSGGGDELWPSGDAAGGVRVGGGGAGPGVGAMLRPAMTYGEYAQSCAKHAGETTVKQLLGAMARQVPGCSAARAQALVQ 512
            AG QP     + +      G WEA LLVD RE+A M   S L   GI  E R LP+ D LW+ RR  D   E++LG   ERKT  DL++SIIDGRYDEQK RL  K   LRR  YL+EG++     H   L  +TLRTAL  ++  G   VV   S+R S   LA  H  IA     P          DE                            + TY  +A SCAK  G  TV+ L GAM RQVPGC A   +AL++
Sbjct:  265 AGSQPLAILVEPQPSPAIPGPWEAVLLVDVRESALMKELSAL---GIRAEARSLPITDFLWLMRRSIDG-KELVLGVGGERKTWQDLSASIIDGRYDEQKYRLASKAIALRRIFYLLEGDVERSHGHARTLPSATLRTALCHTRIIGGFGVVNTPSVRHSAKLLAAMHNVIAR--QKPV---------DE--------------------------DKSTTYDAFASSCAKTVG-ATVRDLTGAMLRQVPGCGAEATKALLE 484          
BLAST of mRNA_P-littoralis_Contig65.18.2 vs. uniprot
Match: A0A7J6LTC1_PEROL (Crossover junction endonuclease mus81 n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6LTC1_PEROL)

HSP 1 Score: 130 bits (328), Expect = 8.200e-28
Identity = 105/262 (40.08%), Postives = 127/262 (48.47%), Query Frame = 0
Query:  261 AGGQPF----QSKAPRYFTGYWEAWLLVDNRETAFMSMQSTLLQKGIPCETRQLPLGDMLWIARRKDDPTSEVLLGYIVERKTVSDLASSIIDGRYDEQKRRL--KLSGLRRPIYLVEGNIN----HQGILAPSTLRTALASSQTCGSLAVVQCDSLRDSVDFLARTHRHIAALLSDPCRCSSGSGGGDELWPSGDAAGGVRVGGGGAGPGVGAMLRPAMTYGEYAQSCAKHAGETTVKQLLGAMARQVPGCSAARAQALVQ 512
            AG QP     + +      G WEA LLVD RE+A M   S L   GI  E R LP+ D LW+ RR  D   E++LG   ERKT  DL++SIIDGRYDEQK RL  K   LRR  YL+EG++     H   L  +TLRTAL  ++  G   VV   S+R S   LA  H  IA     P          DE                            + TY  +A SCAK  G  TV+ L GAM RQVPGC A   +AL++
Sbjct:  681 AGSQPLAILVEPQPSPAIPGPWEAVLLVDVRESALMKELSAL---GIRAEARSLPITDFLWLMRRSIDG-KELVLGVGGERKTWQDLSASIIDGRYDEQKYRLASKAIALRRIFYLLEGDVERSHGHARTLPSATLRTALCHTRIIGGFGVVNTPSVRHSAKLLAAMHNVIAR--QKPV---------DE--------------------------DKSTTYDAFASSCAKTVG-ATVRDLTGAMLRQVPGCGAEATKALLE 900          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig65.18.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7R8_9PHAE4.030e-20759.97ERCC4 domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A836CKB8_9STRA1.090e-5039.87Restriction endonuclease type II-like protein n=1 ... [more]
A0A7S3XK47_HETAK4.250e-3233.00Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7J6SJN9_PEROL2.860e-2940.15Crossover junction endonuclease mus81 n=2 Tax=Perk... [more]
A0A2R5FYX3_9STRA5.930e-2935.63Crossover junction endonuclease MUS81 n=1 Tax=Hond... [more]
C5KCI6_PERM51.270e-2839.60Crossover junction endonuclease MUS81, putative n=... [more]
A0A7J6PLL1_PEROL1.630e-2839.78Crossover junction endonuclease mus81 n=2 Tax=Perk... [more]
A0A7J6RET3_PEROL1.690e-2840.46Crossover junction endonuclease mus81 n=1 Tax=Perk... [more]
A0A7J6ME02_PEROL6.410e-2840.08Crossover junction endonuclease mus81 n=1 Tax=Perk... [more]
A0A7J6LTC1_PEROL8.200e-2840.08Crossover junction endonuclease mus81 n=1 Tax=Perk... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006166ERCC4 domainSMARTSM00891ERCC4_2coord: 281..375
e-value: 6.5E-23
score: 92.1
IPR006166ERCC4 domainPFAMPF02732ERCC4coord: 284..415
e-value: 3.0E-23
score: 82.7
IPR027421DNA polymerase lambda lyase domain superfamilyGENE3D1.10.150.110coord: 53..114
e-value: 3.6E-5
score: 25.9
NoneNo IPR availableGENE3D3.40.50.10130coord: 279..424
e-value: 1.3E-31
score: 111.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 587..633
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 115..169
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..32
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 144..169
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 227..264
NoneNo IPR availablePANTHERPTHR13451:SF0CROSSOVER JUNCTION ENDONUCLEASE MUS81coord: 145..532
IPR042530EME1/EME2, C-terminal domainGENE3D1.10.150.670coord: 486..581
e-value: 2.9E-5
score: 26.5
IPR033309Crossover junction endonuclease Mus81PANTHERPTHR13451CLASS II CROSSOVER JUNCTION ENDONUCLEASE MUS81coord: 145..532
IPR011335Restriction endonuclease type II-likeSUPERFAMILY52980Restriction endonuclease-likecoord: 279..420

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig65contigP-littoralis_Contig65:60405..74631 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig65.18.2mRNA_P-littoralis_Contig65.18.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig65 49610..75312 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig65.18.2 ID=prot_P-littoralis_Contig65.18.2|Name=mRNA_P-littoralis_Contig65.18.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=634bp
MTGRGRGGGRSGNSSRGRGSRGRGTGGAGGGVGGGGAAGRDVRCACEANV
PLLVELQSFDEECLRTGKVKLRHGLMRAMKSLKRYPLPVTTEKEACALEG
VGGFTARRMLRGLLPAAAPATGNNGGGGGGGNSSRRTDEENIEPCRTTSS
SSSSSRGGSRKTNTDGSRACGTSALSSGAGCRASSNNSASGLLRMNLRVD
GGGNSRGVGSGGTLSLASNFSALRGDVADGGGGGGVQTPDVTPKRPTSRA
RREEIDGGATAGGQPFQSKAPRYFTGYWEAWLLVDNRETAFMSMQSTLLQ
KGIPCETRQLPLGDMLWIARRKDDPTSEVLLGYIVERKTVSDLASSIIDG
RYDEQKRRLKLSGLRRPIYLVEGNINHQGILAPSTLRTALASSQTCGSLA
VVQCDSLRDSVDFLARTHRHIAALLSDPCRCSSGSGGGDELWPSGDAAGG
VRVGGGGAGPGVGAMLRPAMTYGEYAQSCAKHAGETTVKQLLGAMARQVP
GCSAARAQALVQEFESPLGLMLAFERAAEGAYEGHPGVDDATRCKRVDAL
LTDLECRGRAGTNKLPQPMRRLLCRLFLGESAGGAGGGGGVDAGGQQHPA
ADRQESSSVVCFSGSDPYRDFDVEPMNQDDPYL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006166ERCC4_domain
IPR027421DNA_pol_lamdba_lyase_dom_sf
IPR042530EME1/EME2_C
IPR033309Mus81
IPR011335Restrct_endonuc-II-like