prot_P-littoralis_Contig65.1.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig65.1.2
Unique Nameprot_P-littoralis_Contig65.1.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length561
Homology
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BLAST of mRNA_P-littoralis_Contig65.1.2 vs. uniprot
Match: A0A6H5KX32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX32_9PHAE)

HSP 1 Score: 149 bits (377), Expect = 1.780e-34
Identity = 76/96 (79.17%), Postives = 85/96 (88.54%), Query Frame = 0 
Query:  421 QGASVIQSVELKEDNEKGRRTVVHDLVSISQRCSEGVHLGLHCAFARDGERCFLHGTEDEWKAEVAKGGEAKKKALRLNCLSSGAIRYPLAAQTAE 516
            QGASVIQSVELK+ NE GRRTVV +LVSI +RCSE VHLGLHCA ARDGERCFLHGTE+E KA+VAKGG  K++ALRLN  SSGAIR+PLAAQTA+
Sbjct:   10 QGASVIQSVELKDLNENGRRTVVQNLVSICRRCSEKVHLGLHCALARDGERCFLHGTENERKAKVAKGGTVKEEALRLNYYSSGAIRFPLAAQTAD 105
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig65.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KX32_9PHAE1.780e-3479.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 294..314

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig65contigP-littoralis_Contig65:11394..13894 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig65.1.2mRNA_P-littoralis_Contig65.1.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig65 8787..22050 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig65.1.2 ID=prot_P-littoralis_Contig65.1.2|Name=mRNA_P-littoralis_Contig65.1.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=561bp
MRLESEATGTLMPPGPRELRVNFSCFKCETINLAVSLQAKCSDPNSKMWS
MDDTVVHLHFHALRSWIWPPAVPPRKRNNMASSPRDAMADERAAVELAGG
ARSTLPEVEPKEVDGEGRVSGITPSDSVGVEKRHQAALQRAAQGKVKMKN
PANIHPQRIVSASPTPRAVRVGENVVVPTSREKKRSPQRTYACVETDVVN
LAASIHRVGTGCSGPLTTEGARSESSSSVGMEISCCGCGAKFDRLELGGT
DDWATVLGILLAGSTFTAWSASCQYSDHKVMDGKFFSGHKRKILAAVDRL
MEEHLEEIQSALRADKSRLVKVHRDDHYFLKHRDRLLEFMTTPFGLQLEG
TGAQQRGENLEDDMMAVNLLRVLKQKSLNKGGSGDVNDWFPKFEMEGERV
LLTEIDVALDASFRHRSRVAQGASVIQSVELKEDNEKGRRTVVHDLVSIS
QRCSEGVHLGLHCAFARDGERCFLHGTEDEWKAEVAKGGEAKKKALRLNC
LSSGAIRYPLAAQTAEGAGAKLICLRTLLAGFWVRVICHDQDAHIGSIFR
VLYNPQECFD*
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