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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 4211 |
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Cds size | 2826 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791350.9616559-UTR-P-littoralis_Contig649:34506..34557 | 1680791350.9616559-UTR-P-littoralis_Contig649:34506..34557 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig649 34507..34557 + |
| 1680791351.038243-UTR-P-littoralis_Contig649:38434..39768 | 1680791351.038243-UTR-P-littoralis_Contig649:38434..39768 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig649 38435..39768 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791350.9746637-CDS-P-littoralis_Contig649:34557..34767 | 1680791350.9746637-CDS-P-littoralis_Contig649:34557..34767 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig649 34558..34767 + |
| 1680791350.997592-CDS-P-littoralis_Contig649:35435..36053 | 1680791350.997592-CDS-P-littoralis_Contig649:35435..36053 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig649 35436..36053 + |
| 1680791351.011575-CDS-P-littoralis_Contig649:36270..36405 | 1680791351.011575-CDS-P-littoralis_Contig649:36270..36405 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig649 36271..36405 + |
| 1680791351.025679-CDS-P-littoralis_Contig649:36571..38434 | 1680791351.025679-CDS-P-littoralis_Contig649:36571..38434 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig649 36572..38434 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig649.16.4 >prot_P-littoralis_Contig649.16.4 ID=prot_P-littoralis_Contig649.16.4|Name=mRNA_P-littoralis_Contig649.16.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=942bp
MLARDINARMNELGEKRKAVEEALRGQPALDTEARCSLMMEHRSLGQVER
RLANERLRSLKPRERVAISRARVIGRGAQLVGQRWDKAFGDNAAMVKYLH
LAESLGPLSRFKLDEYQAAEMKCVLDAFIRVHKAAGATPAQGGIALLDLS
QRVIMEVLNEIKFGKEPGPRNITWVITQLRSGMDVVATVVENLSRERLTA
VRRFLYRLGVAGENPPPALFEQCDVTLRGILAVVKSKDSLPIPEEPENSP
ILPLPWDAYDVAQSLHDFAEQLGRLQDNNQNIRAAEALCRQAVRIWELFL
WRSHPQLAQGYETLASLIKHQAERLGEAEDLLRRALEIRETKLGADVQVA
FTLHSLGQCVRQAGRLGEAEELFRRALEIKEAKVGADDTQVAMTLQEMGV
CVREAGRLGEAEALFRRALEIREAKLGPDDLPVTVTLQEMGVCLREAGRL
GEAEALFRRALEIKEAKLGADDTQVAMTLQEMGVCVREAGRLGEAEALFR
RALEIKEAKFGTADPQVAVTLQEMGVCVREAQRPGQAEALFRRALEIREA
NLGPDDLPVAMTLQEIGVCVREAGRPGEAEALFRRALEIKEAKFGADHLQ
VAVTLQEMGVCVREAGRPEEAEALFRRALEIKETKFGADDICVGGILYEM
GQSVRQAGRLGEAGELFRRALEIEEAKLGPDDLQVAYTLHEMGVCVREAW
RPEKAEVLFRRALNIKEATLGADDPGVAVTLHEMGVCMRQAGRPEEAEAL
LRRALTIEEAKLGPDDPGVAVTLHEMGVCLRQAGRLGEAEELLRRALEIK
VAELGPDDLQVANVLHILGQCVREEGRPGEAEALSRRALEIKEAKLGDDD
PGIAVTLQEMGVCVREAGRPGKAEALFWRALEIREAKLGPDHVDVAVTLY
SMGLCVREEGRSKEANALFERALKIKEAMGADNLTNCLSER* back to topmRNA from alignment at P-littoralis_Contig649:34507..39768+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig649.16.4 ID=mRNA_P-littoralis_Contig649.16.4|Name=mRNA_P-littoralis_Contig649.16.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=5262bp|location=Sequence derived from alignment at P-littoralis_Contig649:34507..39768+ (Pylaiella littoralis U1_48)
CGTACTTCATTGTACAGCTCGGCGACAAGGTAACCCTCCCTGACGCCGGG
GATGTTGGCACGAGACATTAATGCTCGCATGAACGAGCTGGGGGAAAAAC
GGAAGGCAGTGGAGGAAGCACTTCGTGGTCAACCTGCTCTGGACACCGAA
GCTCGTTGTTCACTGATGATGGAACATCGTAGCTTGGGACAAGTTGAACG
CCGCCTTGCGAACGAGCGCCTGCGTTCGCTTAAACCCAGAGAACGTGTCG
CGATATCCAGGGTGAGTGAGTTGGTGCCGGGTGATCTGGTCGATCCAGTG
GTGTTTGAGTGCACGAAAGGTACCGACGGGCTGGGCTGACCGAGAAAGTC
GCAGTCATCTCGGTCGGGGCCTAGCCAGGTCTACGTCCGATGTGTCTGAG
AGTTCAACTTAAAATTGCTGGCCGCGTCTAGAGAAGGACACGGGTGTACT
TGTAGCTTCGAAAAGTTTTAAATCCGAGAAGATACAGACAAATGATCAAT
TGGCGGCGCAGTTGTGACTCTGGCCCCGCTGTTTTCCTTCCGTGCGACCC
CGGCTGATACGTCTCGTTGTACACATATTATACACCGAAATGTGTAGTAC
ATGCAAAAGAGTGTAGCAATTTACTCCGGAGTACACCGTATGGGCATCGA
AGGTGTTTTGACAGACCGCAGAATAGATAGGGACGAAAATACACACACAC
AATTTGTCCCCAAACCAATGTTCCTAAAATATTCCTTCTCATGTAGGCTA
ACTCGTGTACGAGAAAGATCAATTGACCAGTCTTGATTGCTTTCTTCTCA
ATCACACCACGTCAAGCGTTCATTTTCTACATAACTTCGACCCGCGTGGG
AATTTGAGTTCAACCACTCTGTGAGTTTCTTGCTCGGCCCAGCTTGTACT
GAGAACCTAAAATGTAAATTTTGCGGCAGGCCAGGGTAATAGGCCGCGGC
GCCCAACTGGTGGGTCAACGATGGGACAAGGCGTTTGGGGACAATGCCGC
GATGGTGAAATATCTTCACTTGGCCGAGTCCTTGGGTCCCTTGTCCCGCT
TCAAATTGGACGAGTACCAAGCGGCAGAGATGAAGTGTGTGCTTGATGCA
TTCATCCGCGTTCATAAGGCAGCAGGAGCTACACCAGCTCAGGGAGGTAT
TGCCCTGTTAGACCTAAGCCAGCGTGTGATCATGGAAGTGTTGAACGAAA
TAAAGTTCGGGAAGGAGCCTGGACCGAGGAATATAACGTGGGTCATAACA
CAGCTCCGCTCTGGGATGGACGTCGTCGCCACCGTTGTGGAGAATCTTTC
ACGAGAGAGACTCACCGCCGTCCGGCGCTTTCTGTACAGACTTGGCGTAG
CCGGTGAGAATCCGCCACCGGCGCTTTTTGAACAATGCGACGTCACCCTT
CGAGGTATCCTGGCTGTGGTGAAATCAAAAGATTCTCTCCCTATCCCCGA
GGAGCCCGAGAACTCACCAATACTACCTCTCCCTTGGGACGCTTACGATG
TGGCTCAATCTCTTCATGATTTCGCGGAGCAATTGGGACGCCTTCAGGTA
AGAGCAATCCCGGGTGACGAGTTACAACGTCCAGATATTTAGGTTGACGC
CCCGTGCAACAGGTATTTTCCACCACAAAGGAGGGACTATCTGTGTTGGG
ATATGAACTGCGCAGTTACACGGAGCACACGGGGACACCTTCAGCAGCCG
CATTGTCACGCCTGCTGTTTAATTCCGTCGTTCGTTTTTCTTTTGCATAC
CTCATACCTCACAGGATAACAATCAAAATATTCGAGCGGCAGAGGCTTTG
TGCCGGCAAGCTGTGCGAATCTGGGAACTTTTCCTATGGCGTTCACATCC
ACAGTTGGCGCAGGGATACGAGACGCTGGCGTCATTGATCAAGCACCAGG
TGAAAATTTGAGCCAGTTTGTGAAATTTCGAAGGTCTTAGATAGGTCTCG
CAGTTTTCCGACACATCGAGGAGATCGAAACGCGGCTGTTTAGCTAGTCG
AGAGAATATGCTTGGGCCAGATCACTTTGACATGGCCGACTCGCTCAAAC
GTGTGTGAACTACAGGCGGAGCGACTGGGGGAGGCGGAGGACTTACTAAG
GCGAGCACTAGAAATCAGGGAGACCAAGTTGGGGGCCGACGTACAGGTTG
CCTTCACACTACACTCGCTGGGTCAGTGTGTGCGGCAGGCGGGGCGACTG
GGGGAGGCGGAAGAGTTGTTCAGGCGAGCGCTGGAGATCAAGGAGGCCAA
GGTGGGGGCCGACGATACGCAAGTCGCCATGACGCTGCAGGAGATGGGTG
TGTGTGTGCGGGAGGCGGGGCGGCTGGGTGAGGCAGAAGCGTTGTTCAGG
CGAGCGCTGGAGATCAGGGAGGCCAAGTTGGGGCCCGACGATCTACCAGT
CACCGTGACGCTGCAAGAGATGGGTGTGTGTTTGCGGGAGGCGGGGCGGC
TGGGTGAGGCAGAAGCGTTGTTCAGGCGAGCGCTGGAGATCAAGGAAGCC
AAATTGGGGGCCGACGATACGCAAGTCGCCATGACGCTGCAAGAGATGGG
TGTGTGTGTGCGGGAGGCGGGGCGGCTGGGTGAGGCAGAAGCGTTGTTCA
GGCGAGCGCTGGAGATCAAGGAAGCCAAGTTCGGGACCGCCGATCCGCAA
GTCGCCGTGACGCTGCAAGAGATGGGTGTGTGTGTGCGGGAGGCGCAGCG
GCCGGGTCAGGCAGAAGCGTTGTTCAGGCGAGCGCTGGAGATCAGGGAGG
CGAATTTGGGGCCCGACGATCTACCAGTCGCCATGACGCTGCAGGAGATA
GGTGTGTGTGTGCGGGAGGCGGGGCGGCCGGGTGAGGCAGAAGCGTTGTT
CAGGCGAGCGCTGGAGATCAAGGAGGCCAAGTTTGGAGCCGACCATCTAC
AAGTCGCCGTGACGCTGCAGGAGATGGGTGTGTGTGTGCGGGAGGCGGGG
CGACCGGAGGAGGCAGAAGCGTTGTTCAGGCGAGCGCTGGAGATCAAGGA
GACCAAGTTTGGGGCCGACGATATTTGCGTTGGCGGAATACTGTACGAGA
TGGGTCAGAGTGTGCGGCAGGCGGGGCGGCTGGGGGAGGCGGGAGAGTTG
TTCAGGCGAGCGCTGGAGATCGAAGAGGCCAAGTTGGGGCCCGACGATCT
ACAAGTTGCCTACACGCTGCACGAGATGGGTGTGTGTGTGCGGGAAGCAT
GGCGACCGGAGAAGGCGGAAGTATTGTTTAGGCGAGCGCTGAACATCAAG
GAGGCCACGCTAGGAGCCGACGATCCCGGAGTAGCCGTGACGCTGCACGA
GATGGGTGTATGTATGCGGCAGGCGGGGCGACCGGAGGAGGCGGAAGCGT
TGTTGAGACGAGCGCTGACGATCGAAGAGGCCAAGTTGGGGCCCGACGAT
CCCGGAGTCGCCGTGACGCTTCACGAGATGGGTGTGTGTCTGCGGCAGGC
GGGGCGACTCGGGGAGGCGGAGGAGTTGTTGAGACGAGCGCTGGAGATAA
AGGTGGCCGAGTTGGGGCCCGACGATCTGCAAGTCGCCAACGTCCTGCAC
ATCCTTGGTCAGTGTGTGCGGGAGGAGGGGCGGCCTGGGGAGGCGGAAGC
GTTGTCTAGGCGAGCGCTGGAGATCAAGGAGGCAAAGTTGGGGGATGACG
ATCCCGGAATCGCCGTGACGCTGCAGGAGATGGGCGTGTGCGTGCGGGAG
GCGGGGCGGCCGGGTAAGGCGGAAGCGTTGTTTTGGCGAGCGCTGGAGAT
CAGGGAGGCCAAGTTGGGCCCCGACCACGTGGATGTTGCCGTGACGCTGT
ACTCGATGGGTTTGTGTGTGCGGGAGGAGGGGCGGTCGAAGGAAGCAAAC
GCATTGTTTGAGCGAGCGCTGAAGATCAAGGAGGCCATGGGGGCCGACAA
TCTGACTAATTGTTTGAGCGAGCGCTGAAGATCAAGGAGGCCATTGGGAG
CCGACAATCTGACTTCACCTTGTCGCGTAGACCAGCCGGGACGGAATAGC
ATGCGGAATAGTGCCCACTCCATGTTCGCTTTTCCCTTTTTTTGACGTAA
GGTCGAGGCCGAAGAAGACAAAATGTCACCTGTGATTCTGACGCGAAGTC
GTCGATCGGCCCAAGTAGCACATCTGCTTGGTTCCGATGGGAAATGTGGA
GGCCACGTAGAGGAATTGCGCTCGCGTGATCATGTTGCTATGTATCACGT
TCTTTGTAGTAGCACTTGGCTCCAATTTTTGCTGATGCACATGTTTTCCC
TGCCTCTCGTCGGGGTTTCTAATTCCTGTGTGTTGTCTGGATCTTTTGTT
CAATTGTCTGGCATGTTGGTACAACACGAAGAGTCTCCGGTCGGTCGGAC
CTGGTGCGGATGCAAAGAAGGTTGAGCAGAGATCGGGCCCCGTTTTGACT
GAGGACATCAACAACCCCCAAACGATTTGTGGAGGGAAACAAATATTTTA
CATGACGGCACCCGGTAACACCAAGTATGCCCGACGGGTGATGGGGAGAG
CTATCGCCCACCTCTCTGGTTCAAAGATACATGATGAAACTGCGTCGTGT
CTAAACCAAAACCATATCGCTTCCAGTGTCACACGCTTGTTGCACCCCCA
TAACCTCAGCAACTGCCCTTGATCCATTCCAAGTCTCCCCTGCTTGGTTT
TACAGAGTAAAATAAACGTTAATTACACATGCTGATCGACACTTCAAGCC
ATCCGCAGCCACCTACCTCATGCTCGCAGACAGCAACACCGTCCCTTAAA
AACCATGTGTCTTTGCAACTTCCTTTGCGGTACTGATACTGACCGCCATG
TCAACTTCACCTCATTTGCCCATACAACCAGCATCCCGCCCATCACAGCC
AGAATGCTCCTGGCTTCTTTGCAAAGCTTGGACCACTCGGTCGTGCAAGA
GTCGGCGCTTTGGAGTGGAAGCTCGGCTTCGAACTTGACAGAAACATTCT
TGGCCCGACACGCGTACTCCAAATACACTCGCGCGACAGAAGAGGCAAAT
CAATAACTGACCTCTATCAACGTTCCTGCATGCATCTTTTCTTCAGTACG
GGGAAGGCCGAAGAGGAAGAGGGGTCCACCATCAGGGGTATAGAGGGCAC
CCGCTCGTAAGAAAAAAATCAGTAGAAAATGAAGCTCACTTTTCCGCGAA
AAATAAGTTGAGCTAAGAAATAGAGCTCAATCGTGGATTGTACACTAAAC
CCTATACAACGACCTTCGCTCGACGGTTATGGCGAAATAAGAACCTGAGC
CCCGACTCATAT back to topCoding sequence (CDS) from alignment at P-littoralis_Contig649:34507..39768+ >mRNA_P-littoralis_Contig649.16.4 ID=mRNA_P-littoralis_Contig649.16.4|Name=mRNA_P-littoralis_Contig649.16.4|organism=Pylaiella littoralis U1_48|type=CDS|length=2826bp|location=Sequence derived from alignment at P-littoralis_Contig649:34507..39768+ (Pylaiella littoralis U1_48)
ATGTTGGCACGAGACATTAATGCTCGCATGAACGAGCTGGGGGAAAAACG
GAAGGCAGTGGAGGAAGCACTTCGTGGTCAACCTGCTCTGGACACCGAAG
CTCGTTGTTCACTGATGATGGAACATCGTAGCTTGGGACAAGTTGAACGC
CGCCTTGCGAACGAGCGCCTGCGTTCGCTTAAACCCAGAGAACGTGTCGC
GATATCCAGGGCCAGGGTAATAGGCCGCGGCGCCCAACTGGTGGGTCAAC
GATGGGACAAGGCGTTTGGGGACAATGCCGCGATGGTGAAATATCTTCAC
TTGGCCGAGTCCTTGGGTCCCTTGTCCCGCTTCAAATTGGACGAGTACCA
AGCGGCAGAGATGAAGTGTGTGCTTGATGCATTCATCCGCGTTCATAAGG
CAGCAGGAGCTACACCAGCTCAGGGAGGTATTGCCCTGTTAGACCTAAGC
CAGCGTGTGATCATGGAAGTGTTGAACGAAATAAAGTTCGGGAAGGAGCC
TGGACCGAGGAATATAACGTGGGTCATAACACAGCTCCGCTCTGGGATGG
ACGTCGTCGCCACCGTTGTGGAGAATCTTTCACGAGAGAGACTCACCGCC
GTCCGGCGCTTTCTGTACAGACTTGGCGTAGCCGGTGAGAATCCGCCACC
GGCGCTTTTTGAACAATGCGACGTCACCCTTCGAGGTATCCTGGCTGTGG
TGAAATCAAAAGATTCTCTCCCTATCCCCGAGGAGCCCGAGAACTCACCA
ATACTACCTCTCCCTTGGGACGCTTACGATGTGGCTCAATCTCTTCATGA
TTTCGCGGAGCAATTGGGACGCCTTCAGGATAACAATCAAAATATTCGAG
CGGCAGAGGCTTTGTGCCGGCAAGCTGTGCGAATCTGGGAACTTTTCCTA
TGGCGTTCACATCCACAGTTGGCGCAGGGATACGAGACGCTGGCGTCATT
GATCAAGCACCAGGCGGAGCGACTGGGGGAGGCGGAGGACTTACTAAGGC
GAGCACTAGAAATCAGGGAGACCAAGTTGGGGGCCGACGTACAGGTTGCC
TTCACACTACACTCGCTGGGTCAGTGTGTGCGGCAGGCGGGGCGACTGGG
GGAGGCGGAAGAGTTGTTCAGGCGAGCGCTGGAGATCAAGGAGGCCAAGG
TGGGGGCCGACGATACGCAAGTCGCCATGACGCTGCAGGAGATGGGTGTG
TGTGTGCGGGAGGCGGGGCGGCTGGGTGAGGCAGAAGCGTTGTTCAGGCG
AGCGCTGGAGATCAGGGAGGCCAAGTTGGGGCCCGACGATCTACCAGTCA
CCGTGACGCTGCAAGAGATGGGTGTGTGTTTGCGGGAGGCGGGGCGGCTG
GGTGAGGCAGAAGCGTTGTTCAGGCGAGCGCTGGAGATCAAGGAAGCCAA
ATTGGGGGCCGACGATACGCAAGTCGCCATGACGCTGCAAGAGATGGGTG
TGTGTGTGCGGGAGGCGGGGCGGCTGGGTGAGGCAGAAGCGTTGTTCAGG
CGAGCGCTGGAGATCAAGGAAGCCAAGTTCGGGACCGCCGATCCGCAAGT
CGCCGTGACGCTGCAAGAGATGGGTGTGTGTGTGCGGGAGGCGCAGCGGC
CGGGTCAGGCAGAAGCGTTGTTCAGGCGAGCGCTGGAGATCAGGGAGGCG
AATTTGGGGCCCGACGATCTACCAGTCGCCATGACGCTGCAGGAGATAGG
TGTGTGTGTGCGGGAGGCGGGGCGGCCGGGTGAGGCAGAAGCGTTGTTCA
GGCGAGCGCTGGAGATCAAGGAGGCCAAGTTTGGAGCCGACCATCTACAA
GTCGCCGTGACGCTGCAGGAGATGGGTGTGTGTGTGCGGGAGGCGGGGCG
ACCGGAGGAGGCAGAAGCGTTGTTCAGGCGAGCGCTGGAGATCAAGGAGA
CCAAGTTTGGGGCCGACGATATTTGCGTTGGCGGAATACTGTACGAGATG
GGTCAGAGTGTGCGGCAGGCGGGGCGGCTGGGGGAGGCGGGAGAGTTGTT
CAGGCGAGCGCTGGAGATCGAAGAGGCCAAGTTGGGGCCCGACGATCTAC
AAGTTGCCTACACGCTGCACGAGATGGGTGTGTGTGTGCGGGAAGCATGG
CGACCGGAGAAGGCGGAAGTATTGTTTAGGCGAGCGCTGAACATCAAGGA
GGCCACGCTAGGAGCCGACGATCCCGGAGTAGCCGTGACGCTGCACGAGA
TGGGTGTATGTATGCGGCAGGCGGGGCGACCGGAGGAGGCGGAAGCGTTG
TTGAGACGAGCGCTGACGATCGAAGAGGCCAAGTTGGGGCCCGACGATCC
CGGAGTCGCCGTGACGCTTCACGAGATGGGTGTGTGTCTGCGGCAGGCGG
GGCGACTCGGGGAGGCGGAGGAGTTGTTGAGACGAGCGCTGGAGATAAAG
GTGGCCGAGTTGGGGCCCGACGATCTGCAAGTCGCCAACGTCCTGCACAT
CCTTGGTCAGTGTGTGCGGGAGGAGGGGCGGCCTGGGGAGGCGGAAGCGT
TGTCTAGGCGAGCGCTGGAGATCAAGGAGGCAAAGTTGGGGGATGACGAT
CCCGGAATCGCCGTGACGCTGCAGGAGATGGGCGTGTGCGTGCGGGAGGC
GGGGCGGCCGGGTAAGGCGGAAGCGTTGTTTTGGCGAGCGCTGGAGATCA
GGGAGGCCAAGTTGGGCCCCGACCACGTGGATGTTGCCGTGACGCTGTAC
TCGATGGGTTTGTGTGTGCGGGAGGAGGGGCGGTCGAAGGAAGCAAACGC
ATTGTTTGAGCGAGCGCTGAAGATCAAGGAGGCCATGGGGGCCGACAATC
TGACTAATTGTTTGAGCGAGCGCTGA back to top
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