prot_P-littoralis_Contig646.9.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig646.9.1
Unique Nameprot_P-littoralis_Contig646.9.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length72
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig646.9.1 vs. uniprot
Match: A0A6H5K3H5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3H5_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 1.050e-19
Identity = 37/53 (69.81%), Postives = 44/53 (83.02%), Query Frame = 0 
Query:    2 VGVVFKLRLSFLEPSKTRGQWLKDNPHSLTIVLPRAGYRGRKCNVPQAWFMWY 54
            VGV FKLRLSFLEP+KTRG+WLKDNP S  +VLPRA Y GR C+  +AWF+W+
Sbjct:  108 VGVAFKLRLSFLEPTKTRGKWLKDNPPSAVVVLPRATYCGRVCSSTEAWFIWH 160
[Close]
BLAST of mRNA_P-littoralis_Contig646.9.1 vs. uniprot
Match: A0A433N1N0_CHLFR (Uncharacterized protein n=1 Tax=Chlorogloeopsis fritschii PCC 6912 TaxID=211165 RepID=A0A433N1N0_CHLFR)

HSP 1 Score: 49.3 bits (116), Expect = 3.230e-5
Identity = 26/72 (36.11%), Postives = 40/72 (55.56%), Query Frame = 0 
Query:    2 VGVVFKLRLSFLEPSKTRGQWLKDNPHSLTIVL----PRAGYRG--RKCNVPQAWFMW-----YTGEKAHCP 62
            VGV F LRLS+LEP+K RG W  ++  +++ ++    PR  + G  R  +V  AW +W     +  +  HCP
Sbjct:  119 VGVCFLLRLSYLEPTKARGDWFLEHMDNMSNLIIFGQPRPSFTGDRRVDSVTTAWMVWRKDWSWKAKGCHCP 190
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig646.9.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K3H5_9PHAE1.050e-1969.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A433N1N0_CHLFR3.230e-536.11Uncharacterized protein n=1 Tax=Chlorogloeopsis fr... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig646contigP-littoralis_Contig646:31832..32047 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig646.9.1mRNA_P-littoralis_Contig646.9.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig646 31832..32047 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig646.9.1 ID=prot_P-littoralis_Contig646.9.1|Name=mRNA_P-littoralis_Contig646.9.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=72bp
HVGVVFKLRLSFLEPSKTRGQWLKDNPHSLTIVLPRAGYRGRKCNVPQAW
FMWYTGEKAHCPIAQQVVFAV*
back to top