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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 2436 |
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Cds size | 1434 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791343.9194863-UTR-P-littoralis_Contig644:58387..58442 | 1680791343.9194863-UTR-P-littoralis_Contig644:58387..58442 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig644 58388..58442 + |
| 1680791343.9733908-UTR-P-littoralis_Contig644:60734..61681 | 1680791343.9733908-UTR-P-littoralis_Contig644:60734..61681 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig644 60735..61681 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791343.9333608-CDS-P-littoralis_Contig644:58442..58567 | 1680791343.9333608-CDS-P-littoralis_Contig644:58442..58567 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig644 58443..58567 + |
| 1680791343.9436526-CDS-P-littoralis_Contig644:58795..60051 | 1680791343.9436526-CDS-P-littoralis_Contig644:58795..60051 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig644 58796..60051 + |
| 1680791343.9599564-CDS-P-littoralis_Contig644:60681..60734 | 1680791343.9599564-CDS-P-littoralis_Contig644:60681..60734 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig644 60682..60734 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig644.10.2 >prot_P-littoralis_Contig644.10.2 ID=prot_P-littoralis_Contig644.10.2|Name=mRNA_P-littoralis_Contig644.10.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=478bp
MRTKCNHVGCSKRASYGVAGTKTAELCSGHAKDGTVNVVSKMCNHRGCTK
RPSFGVAGTKTAEFCSGHAKDGMMDVIHKRCTHRGCTKHSSFGMAGTKTA
GLCSGHAKDGMMDVISKTCNQHGCTKRASFGVAGTKTAEFCSEHAKDGMM
DVMNKTCKHRGCTKRASFGVAGTKTAEFCSGHAKDGMVNVKRKRCNHRGC
TKRASYGVAGTKTAEFCSGHAKDGMVNVKDKKRCNKKCSHRGCTKLAKSS
AVGKEQAEVCNEHVKGGIVDVVNERCAPPGCTTSPRVGVTGGIRTFCTRH
AGDGMADLTVPNNRAGVHSSNSGGAQGHGGVAVEGDTAQRSGAGEKRRDR
SPSSAQMETSPCRSKRSRQVAVHTYEPKTPLETAANGDHTPVGLGSLSEP
ENAGVKAEVAVSSKSDPARSSPFEAAAWVTSAENGSCGEPDGAVKREVGI
PFPSKGAAAVGKLKSRRTKRVTGETRK* back to topmRNA from alignment at P-littoralis_Contig644:58388..61681+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig644.10.2 ID=mRNA_P-littoralis_Contig644.10.2|Name=mRNA_P-littoralis_Contig644.10.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=3294bp|location=Sequence derived from alignment at P-littoralis_Contig644:58388..61681+ (Pylaiella littoralis U1_48)
TGTCCGCGGCGGTCGAAAGCATAGCTCGCAAGCCTTCTCTTTTGCCCAAG
GCAGGATGCGGACCAAGTGTAACCATGTTGGCTGCTCGAAGCGGGCGAGC
TATGGTGTCGCAGGTACCAAGACGGCGGAGCTCTGCTCTGGACACGCCAA
GGACGGGACGGTGAACGTCGTGAGCAAGATGTGCAACCACCGTGGGTGCA
CCAAGCATCCGAGCTATGGTGTGGCAGGTACCAAGACGGCGGAGTTCTGC
TCTGGACACGCCAAGGACGGGATGGTGGACGTCGTGAGCAAGAGGTGCAA
CCACCGTGGGTGCACCAAGCAGCCGAGCTTTGGTATGGCGGGTACCAAGA
CGGCGGAGCTCTGCTCTGAACACGCCAAGGGCGGGATGGTGAACGTCATG
AACAAGAGGTGCAACCACCGTGGCTGCACCAAGCGGCCGAGCTTTGGTGT
GGCGGGTACCAAGACGGCGGAGTTCTGCTCTGGACACGCCAAGGACGGGA
TGATGGACGTCATCCACAAGAGGTGCACCCACCGTGGCTGCACCAAGCAT
TCGAGCTTTGGTATGGCGGGTACCAAGACGGCGGGGCTCTGCTCTGGACA
CGCCAAGGACGGGATGATGGATGTCATCAGCAAGACGTGCAACCAGCATG
GCTGCACCAAGCGGGCGAGCTTTGGTGTGGCGGGCACCAAGACGGCGGAG
TTCTGCTCTGAACACGCCAAGGACGGGATGATGGACGTCATGAACAAGAC
GTGCAAGCACCGTGGCTGCACCAAGCGGGCGAGCTTTGGTGTGGCAGGCA
CCAAGACGGCGGAGTTCTGCTCGGGACACGCCAAGGACGGGATGGTGAAC
GTCAAGAGGAAGAGGTGCAACCACCGTGGCTGCACCAAGCGGGCGAGCTA
TGGTGTGGCGGGCACCAAGACGGCGGAGTTCTGCTCTGGACACGCCAAGG
ACGGGATGGTGAACGTCAAAGACAAGAAGAGGTGCAACAAGAAGTGCAGC
CACCGTGGGTGCACCAAGCTAGCGAAATCTAGTGCTGTAGGTAAGGAACA
GGCGGAGGTTTGCAACGAGCATGTCAAGGGCGGAATTGTGGACGTCGTCA
ATGAGAGATGTGCCCCACCAGGTTGCACCACCTCTCCTCGCGTCGGTGTG
ACCGGCGGCATTCGAACCTTCTGTACGCGACATGCTGGAGATGGCATGGC
GGATCTCACCGTACCCAATAACCGAGCTGGTGTCCACAGCAGTAACAGTG
GTGGCGCACAAGGGCATGGCGGTGTGGCAGTGGAAGGGGACACTGCCCAA
CGTTCTGGTGCCGGTGaAAAGAGGAGGGACCGCTCTCCTTCATCCGCCCA
GATGGAGACATCTCCGTGCAGGAGCAAGCGAAGCCGCCAGGTGGCCGTCC
ACACGTATGAGCCTAAGACTCCACTCGAAACAGCAGCGAACGGAGACCAC
ACTCCAGTTGGATTAGGTTCGTTGTCAGAGCCAGAGAATGCTGGGGTGAA
GGCAGAGGTGGCTGTCTCATCAAAGTCAGACCCCGCGCGATCTTCCCCAT
TTGAAGCAGCAGCATGGGTCACCTCTGCGGAGAATGGTTCGTGTGGTGAG
CCAGACGGTGCGGTGAAGAGGGAAGTGGGAATCCCATTTCCGTCGAAAGG
AGCGGCAGCTGTGGGTGAGTCGAAAACAGTTGATTTTGATGCAGTAGCCG
AGTCTCGCATGTCGGATTGTCTCATCGCTGAGTTCTCGACTCGCCACTTG
TTTCTTTGTCTTTGCCATGTTGGGGGGAGTGGAAAACGAGCAGGTCGTGT
TTTCTTTGTGGTAGATTTGCGTGATGCACCGGCAGGTTTAATACCTGTTC
GAGCAGAACAGATGCCTATTGCACCGTACCCCTGCAGTGAGGGGAGCTGG
TAACAAATTATTGACGTGCACATTTTACCTTCAAGGAGTCCCCGTGGGTG
ATGAGTCGAAACTTGTATCATATGCCTCGGCGGTTTTATGCGGCGTAATA
CTCATTGTTTGGCTGATCTCTCGCAACGTCGGTTTGATTGGCAATACTGC
TTGGTGTTTTGTTTTCCTCATGGAAAAATCAATTTTGTAACCTGTGTGTT
TGCTGTTCAAGTAAACTCTACGGCGGTGTGCGTGGATACAACACGCGTTC
TGGTAGAAAAAGCCGCGTCGTATTGGCGATAAACTTGAGAGCAGTGCATC
AGCGGTTACGGCCGTGGCAGACCCTACCGCTGCCGTCCTCATTTCAAGCT
CCCAAGAATCCTTGTTGATCTTCCAATGCGTTACTTTGAAACAGGTAAGC
TAAAGTCAAGGAGGACCAAGAGGGTAACGGGGGAGACCCGGAAGTAGCAT
GATTGCACCTTCGGGACTGACGACCGAACTGCTGTTGTGGGCGATCTTTG
GCGGTCCGCTCTTCTGACTGGTATTCGTGTCAACAGCATGCCATGTCACC
GTGGTGTTGTTTACTGTGTACTGATTCGGAGGATGTCAACCTGCGACATC
CAGGGGTTGACCAGGCATGTTGTTGAACACAGAGCACACGAATACAGAGA
TCGAGTAGGGGGGCACACTTTGTGGCGCGATCGAATTCAGCAGCATCGCC
ACTTCCACTGCTGTGCGCATGCATGTACGGCAACAGGGCAACTACCAATA
CTCTTTTTCCGCTGTAGACGAAAATGTTGGGGCAAATGCAGGCAGACGAG
GTAGCAAAGCAAGGCCTTTTCATGCACTGGTCAAAGGGTGGCGTTCTACT
GCTGTGCTCTGTTCTGATATTTTTGGCTACTTCGATTCTGTCGTTGTTCT
TTTCGTTTCCCGTGTCTCGACGATCTTCGATTTGGTTTGAATCTCTGGCA
TGACCTTGGTGGCATCGGGAATGATCGTGGGGTATTGGTTTTTCATCGTT
GGTTCAAAAGTTTGGTCGCAATCCAGGTCGTGGCGAGGGCTGGGCCGCAC
GAGGCAAAACCGACGATGAACACACCCAACAGCGGCTCGTGCATCTAGGG
GCAACATGAAGAAAGTAAATGAAAAACGGTGCAGATGAATAGAGACCCAC
ATGACGAAAGTACGTTCATCGTGAGCAAGGAGTAGGCAGCCGACGACTAA
AAAAACAACAGCCTAAGGTAGGGACATAAAAGTCGCAAACGGCACACAGA
TACCGTACTATCCTCTAAAGGATCCCctCCCCCGCCCCTCACGGGCCTCT
GTATGAAACCCGATATATCCTCAGAGCAAGGATATCAGCGCCAAAAGATG
GTCGGTGTTTGGAATATCTTGTTGAGGGCTGCCCAGAAAGTTAC back to topCoding sequence (CDS) from alignment at P-littoralis_Contig644:58388..61681+ >mRNA_P-littoralis_Contig644.10.2 ID=mRNA_P-littoralis_Contig644.10.2|Name=mRNA_P-littoralis_Contig644.10.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1434bp|location=Sequence derived from alignment at P-littoralis_Contig644:58388..61681+ (Pylaiella littoralis U1_48)
ATGCGGACCAAGTGTAACCATGTTGGCTGCTCGAAGCGGGCGAGCTATGG
TGTCGCAGGTACCAAGACGGCGGAGCTCTGCTCTGGACACGCCAAGGACG
GGACGGTGAACGTCGTGAGCAAGATGTGCAACCACCGTGGCTGCACCAAG
CGGCCGAGCTTTGGTGTGGCGGGTACCAAGACGGCGGAGTTCTGCTCTGG
ACACGCCAAGGACGGGATGATGGACGTCATCCACAAGAGGTGCACCCACC
GTGGCTGCACCAAGCATTCGAGCTTTGGTATGGCGGGTACCAAGACGGCG
GGGCTCTGCTCTGGACACGCCAAGGACGGGATGATGGATGTCATCAGCAA
GACGTGCAACCAGCATGGCTGCACCAAGCGGGCGAGCTTTGGTGTGGCGG
GCACCAAGACGGCGGAGTTCTGCTCTGAACACGCCAAGGACGGGATGATG
GACGTCATGAACAAGACGTGCAAGCACCGTGGCTGCACCAAGCGGGCGAG
CTTTGGTGTGGCAGGCACCAAGACGGCGGAGTTCTGCTCGGGACACGCCA
AGGACGGGATGGTGAACGTCAAGAGGAAGAGGTGCAACCACCGTGGCTGC
ACCAAGCGGGCGAGCTATGGTGTGGCGGGCACCAAGACGGCGGAGTTCTG
CTCTGGACACGCCAAGGACGGGATGGTGAACGTCAAAGACAAGAAGAGGT
GCAACAAGAAGTGCAGCCACCGTGGGTGCACCAAGCTAGCGAAATCTAGT
GCTGTAGGTAAGGAACAGGCGGAGGTTTGCAACGAGCATGTCAAGGGCGG
AATTGTGGACGTCGTCAATGAGAGATGTGCCCCACCAGGTTGCACCACCT
CTCCTCGCGTCGGTGTGACCGGCGGCATTCGAACCTTCTGTACGCGACAT
GCTGGAGATGGCATGGCGGATCTCACCGTACCCAATAACCGAGCTGGTGT
CCACAGCAGTAACAGTGGTGGCGCACAAGGGCATGGCGGTGTGGCAGTGG
AAGGGGACACTGCCCAACGTTCTGGTGCCGGTGaAAAGAGGAGGGACCGC
TCTCCTTCATCCGCCCAGATGGAGACATCTCCGTGCAGGAGCAAGCGAAG
CCGCCAGGTGGCCGTCCACACGTATGAGCCTAAGACTCCACTCGAAACAG
CAGCGAACGGAGACCACACTCCAGTTGGATTAGGTTCGTTGTCAGAGCCA
GAGAATGCTGGGGTGAAGGCAGAGGTGGCTGTCTCATCAAAGTCAGACCC
CGCGCGATCTTCCCCATTTGAAGCAGCAGCATGGGTCACCTCTGCGGAGA
ATGGTTCGTGTGGTGAGCCAGACGGTGCGGTGAAGAGGGAAGTGGGAATC
CCATTTCCGTCGAAAGGAGCGGCAGCTGTGGGTAAGCTAAAGTCAAGGAG
GACCAAGAGGGTAACGGGGGAGACCCGGAAGTAG back to top
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