prot_P-littoralis_Contig643.12.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig643.12.2
Unique Nameprot_P-littoralis_Contig643.12.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length637
Homology
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BLAST of mRNA_P-littoralis_Contig643.12.2 vs. uniprot
Match: A0A6H5KEE1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEE1_9PHAE)

HSP 1 Score: 145 bits (367), Expect = 3.160e-33
Identity = 187/280 (66.79%), Postives = 196/280 (70.00%), Query Frame = 0 
Query:    1 MPRTKCPIQGCGKEPSFGVPGTRSAKFCRIHADPSMVNVRANRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVGVDDNKTAPXXXXXXXXXXXXXXXXXXXXAECPVRNPRFGVPGSRRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAEFCAKHSAPGMICLRTSKTKKEPGKRRASGDAGGLDGDDAARRARRK-----------------TGGAAPMDWSALQSAAAAAYISKMVPLPTMP 263
            MPRTKCP+QGCGKEPSFGV GTRSAK+CR+HADPS VNVRANRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                  XXXX   +DD+KTAPXXXXXXXXXXXXXXXXXXXX    VRNPRFGVPGSRRNXXXXXXXXXXXXXXXXXXXXXXXXX             KAE+CAKH+APGMICLRTSK+KKE     A G                                     A PMDWSALQSAAAAAYISKMVPLPT+P
Sbjct:    1 MPRTKCPVQGCGKEPSFGVAGTRSAKWCRVHADPSHVNVRANRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMVDVSIRTCAQEGCPKRAXXXXXX-MDDSKTAPXXXXXXXXXXXXXXXXXXXXXXXTVRNPRFGVPGSRRNXXXXXXXXXXXXXXXXXXXXXXXXXPKQPSFGVPGTR-KAEYCAKHAAPGMICLRTSKSKKEA----ALGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTAASAVPMDWSALQSAAAAAYISKMVPLPTVP 274
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BLAST of mRNA_P-littoralis_Contig643.12.2 vs. uniprot
Match: D7FR73_ECTSI (EsV-1-7 (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR73_ECTSI)

HSP 1 Score: 89.7 bits (221), Expect = 1.410e-16
Identity = 94/179 (52.51%), Postives = 100/179 (55.87%), Query Frame = 0 
Query:   97 TVGVDDNKTAPXXXXXXXXXXXXXXXXXXXXAECPVRNPRFGVPGSRRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAEFCAKHSAPGMICLRTSKTKKEPG-------------KRRASGDAGGLDGDDAARRARRKTGGAAPMDWSALQSAAAAAYISKMVPLPTM 262
            T G+DD+KTAP                      C VRNPRFGVPGSRRNXXXXXXXXXXXXXXXXXXXXXXXXX             KAE+CAKH+APGMICLRTSK+KKE                                         A PMDWSALQSAAAAAYISKMVPLPT+
Sbjct:   25 TPGMDDSKTAPFCMSHAREGMEDVVSKRCAFQGCTVRNPRFGVPGSRRNXXXXXXXXXXXXXXXXXXXXXXXXXPKQPSFGVPGTR-KAEYCAKHAAPGMICLRTSKSKKEAALGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVPMDWSALQSAAAAAYISKMVPLPTV 202
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig643.12.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KEE1_9PHAE3.160e-3366.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FR73_ECTSI1.410e-1652.51EsV-1-7 (Partial) (Fragment) n=1 Tax=Ectocarpus si... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 309..325
score: 34.12
coord: 275..296
score: 34.55
coord: 257..269
score: 46.15
coord: 337..354
score: 43.33
NoneNo IPR availableGENE3D6.10.140.110coord: 143..207
e-value: 9.3E-10
score: 40.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 516..531
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 435..451
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 208..234
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 364..425
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 532..627
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 199..240
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 260..354
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 260..636
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 452..515
IPR043822EsV-1-7 cysteine-rich motifPFAMPF19114EsV_1_7_cyscoord: 125..160
e-value: 2.0E-4
score: 21.9
coord: 165..200
e-value: 5.2E-7
score: 30.1
coord: 6..40
e-value: 3.6E-6
score: 27.5
coord: 45..78
e-value: 3.0E-6
score: 27.7
coord: 83..121
e-value: 1.2E-4
score: 22.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig643contigP-littoralis_Contig643:72110..74914 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig643.12.2mRNA_P-littoralis_Contig643.12.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig643 69752..75765 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig643.12.2 ID=prot_P-littoralis_Contig643.12.2|Name=mRNA_P-littoralis_Contig643.12.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=637bp
MPRTKCPIQGCGKEPSFGVPGTRSAKFCRIHADPSMVNVRANRKCAHPGC
MTRPAYGVAGSGKSQFCKPHADPNMVDVSIRTCAHQGGCPKRATHGTVGV
DDNKTAPFCGAHAHEGMEDVVSKRCAHAECPVRNPRFGVPGSRRNATFCG
DHAMTGMVDVITKKCAYPGGCPKQPSFGIPGSRKAEFCAKHSAPGMICLR
TSKTKKEPGKRRASGDAGGLDGDDAARRARRKTGGAAPMDWSALQSAAAA
AYISKMVPLPTMPPPPPPPEAVAAAAPHPPQQQQPLPTHALLPAPPPQAF
RQPLPQQQPLKTPQPPQFPKPPQAPQQPSPQQQLLKTPQPPQFPKSPQPP
QQPPQQQLLKTLQPPQFPKPPQAPQQPPPQQLLKTLQPPQFPKAPQAPQQ
PPPQQLLKTLQPPQFPKPPQAPQQPPAAASEDSAAATVPETSQAPQQPPP
QQLLKTLQPPQFPKPPQAPQQPPPQQLLKTLQPPQFPKVPQPPQARQVPL
TPKAPQPPQGPKPPQALQTPQAAQTQQASHAPQPPPQAPKVPQPPQTPKP
PQVPKVPQLAQAPQPPQAPKPPQPAQAPQPPQAPKPPQPPQTPKAPQPPQ
APRAPQPPQAPKAPQPPQAPKAPQPPQAPRCDDFNG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043822EsV_1_7_cys