prot_P-littoralis_Contig642.31.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig642.31.3
Unique Name	prot_P-littoralis_Contig642.31.3
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	688

Homology

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BLAST of mRNA_P-littoralis_Contig642.31.3 vs. uniprot
Match: D7G8T9_ECTSI (DUF4211 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8T9_ECTSI)

HSP 1 Score: 73.2 bits (178), Expect = 1.160e-9
Identity = 43/72 (59.72%), Postives = 52/72 (72.22%), Query Frame = 0

Query:   94 QLAERWSKLEEDSVRKTSCPGSGGGSRGATRKPALVQLGVQDSWGRATRSKSISSRLFLKEPPPSGDEIGDS 165
            QLAERWSKLEEDS    S  G G  + GA R  +LVQL   ++WGR +RS++ S RL +KEPPPSGDE+GDS
Sbjct:   95 QLAERWSKLEEDSDHDLS-DGDGDDASGAKRS-SLVQLQFHETWGRGSRSRTASRRL-VKEPPPSGDEVGDS 163

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig642.31.3 vs. uniprot

BLAST of mRNA_P-littoralis_Contig642.31.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7G8T9_ECTSI	1.160e-9	59.72	DUF4211 domain-containing protein n=1 Tax=Ectocarp...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 261..275
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..459
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 485..503
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 189..209
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 634..668
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..78
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 615..630
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 474..569
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 282..310
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 393..415
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 586..687
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 328..342
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..54
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 546..569
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 512..531
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 174..188
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..108

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig642	contig	P-littoralis_Contig642:139172..146463 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig642.31.3	mRNA_P-littoralis_Contig642.31.3	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig642 139118..156527 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig642.31.3 ID=prot_P-littoralis_Contig642.31.3|Name=mRNA_P-littoralis_Contig642.31.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=688bp
MSAARRRRVMLESDDEDDQMPGEGGTVVTPKVTPPAERGRPSKSRPRKIA
AFDDDDDDSFDVDEGEEGEQEEQGDDSTGDGGDEAKMERKRRRQLAERWS
KLEEDSVRKTSCPGSGGGSRGATRKPALVQLGVQDSWGRATRSKSISSRL
FLKEPPPSGDEIGDSSDSDDGLGGFIVDSEDEEADADGDDGRGKDGTSNK
KKKTASDKKEAAATAAAAAAAAEGAEASSPSRKRTRKGKTRKSGRGAATR
GGDSGSGGDDEEDTNTNTNTKNTPRGGGGGAAVEGRKRRGRGNSQPGEGE
EKDGRPGGRKRARRSNASGKMPVSAGGEEEEEKEEEEEEEEDDKPVRRSQ
RKKKSDQKGRGKEKADNGKSDSTGGGGSTKPRKKVVAETEAEQEASSSDD
GDGGSSEDDDDDEEFSVEPKKTGKNKSAAATAAAATAKTKSGKGKKKEKK
EKKAVVEVGGGPGAAVAVAAAAVAAAVAATGATKRRRSTPRRRRRRRGRV
RQKTSGIKERMRRGGRRTKRRRRRRCRWRRQPGEHRGGPDERAPLSTTAR
CSTAAALAPRTTTTKSRARATSVVAVVERMEGKAPAALGMATETTAGRRE
RKVATAKTASRGGGRSARGTRTPTRTTVSPKRYETTKKRRRRRRRKRKRK
MWTAVRRRRRRRRGKERGRLRARDAAAAGADVGTDMA*