mRNA_P-littoralis_Contig641.7.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig641.7.1
Unique NamemRNA_P-littoralis_Contig641.7.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig641.7.1 vs. uniprot
Match: A0A6H5JVV9_9PHAE (HSF_DOMAIN domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JVV9_9PHAE)

HSP 1 Score: 362 bits (930), Expect = 7.930e-105
Identity = 334/683 (48.90%), Postives = 376/683 (55.05%), Query Frame = 2
Query:  440 TPASKYPRFGRRGAPQAFPSKLYEILEGENPDIIGWTATGRGFEVRDHARLSSEVLGRFFKQDKFSSFQRQLNLYGFRKITKGGESGSYQHPHFRRGERTTLLTIRRSTKAASARVVVPVSPPSAGAGTPQPTVLPSNXXXXXXXXXXXXXXXXXXXXXXXXXXXAT-----VSRGVLPWPRPAM---------PLTNAAMLQQQHATAAAAAGACEGSPNGSSGTNTTGEQLKXXXXXXXXXXXXXXXGSGNSWVSLPDPA------------------------------NTTSKSHTSEDVNVAAAEKAALDHQDAEVVSLLQRMATEAQDSPERKRAALVAQQWN-VRHLEEGATPSSFEQQLQQP-----------RFEMPKLGAPGAVAVDSIESGQAHQTAFTEHLYDILGYERSSAG---AAHQAAGFFPSSAFIADERATA-AFPRQLQHHQQYQ-LGLPSPLGTASPTFSSSDGTLL--------HLSQP-----PCRNDAFGSSASANRGSGCEGGEE-----MVMSEQDRQVLVARSRSGP-----AFTAEQXXXXXXXXXXXXXXANFNRNDEHXXXXXXXXXXHYNASLVYEPSPNRSSMGGRRGGFSSFDGTRFGSRPSLPSS--VLPPLXXXXXXXXXXXXXXXXSGA-MEIEKVRRPPWHGAESSY 2227
            +PASKYPRFG+RGAPQAFPSKLYEILEGENPDI+GWTATGRGFEVRDHARLSSEVLGRFFKQDKFSSFQRQLNLYGFRKITKG ESGSYQHPHFRRGERTTLLTIRRSTKA+ ARV VPVSP S              XXXXXXXXXXXXXXXXXXXXXXXXXXX       VSRG LPWPRP           P       Q++ +T+    GA E +P+G+   N T    +                 GNSW   PD A                              + TS +  +E   V A  ++ALD  D EVVSLLQRMA EAQDSP RKR AL AQQW   R  +  A  SS  +  QQ            RFE P+          S E+GQ  Q  F E LYD L +ER  AG   AA Q A F  S AF  + RA    FP + Q+ Q YQ  GLPSP G+ + T S               HL  P     PCR      S  +    G EG E      MVMSEQ+RQ L+AR RSGP     A  A  XXXXXXXXXXXXXXA + R+DEH            +A  +Y+ SP+RS +G  RGG  SF   RFGS     S    LPPL            XXXX    + + ++RR PW+G ESSY
Sbjct:   45 SPASKYPRFGKRGAPQAFPSKLYEILEGENPDIVGWTATGRGFEVRDHARLSSEVLGRFFKQDKFSSFQRQLNLYGFRKITKGSESGSYQHPHFRRGERTTLLTIRRSTKASPARVAVPVSPASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSRGSLPWPRPPALVGGAGGGGPFQQGQGQQREPSTS----GAHEVTPDGTITNNNTVPAKRQRQ-------------EGNSWGPYPDTAASAPTXXXXXXXXXXXXXXXXXXXXXXXXXDITSANAAAEQEAVMAQAQSALDQNDVEVVSLLQRMAKEAQDSPARKRVALAAQQWEGARAQQAAACESSPARHAQQXXXXXXXXXXXXRFEKPRPAXXXXXG--SGEAGQTQQMVFAERLYDFLSHERLGAGGGAAASQQARFL-SLAFGTEGRAAPPGFPHK-QYQQHYQGAGLPSPFGSTATTASCXXXXXXXXXXXXFSHLPPPQLQEQPCRRQDPSESEESTLRRGGEGEEGTATGGMVMSEQERQALLARPRSGPSAAAAAVAAVXXXXXXXXXXXXXXXAGYTRDDEHRYYQQQQ-----DAGYMYDRSPDRSLLG--RGGGFSFGSGRFGSGAPQGSGGGALPPLPSLNFEQYSVGGXXXXXXXPVGVGEIRRAPWYGPESSY 699          
BLAST of mRNA_P-littoralis_Contig641.7.1 vs. uniprot
Match: A0A6V1QFS1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QFS1_HETAK)

HSP 1 Score: 135 bits (341), Expect = 3.550e-30
Identity = 63/109 (57.80%), Postives = 80/109 (73.39%), Query Frame = 2
Query:  452 KYPRFGRRGAPQAFPSKLYEILEGENPDIIGWTATGRGFEVRDHARLSSEVLGRFFKQDKFSSFQRQLNLYGFRKITKGGESGSYQHPHFRRGERTTLLTIRRSTKAAS 778
            KYPR G+RGAPQAF  KLYEILE E  D++ W A G  F VRD  R S E+L ++F+  KF+SFQRQLNLYGFRKIT+G ++GSY H +FR+G+   L  +RRS  ++S
Sbjct:    2 KYPRTGQRGAPQAFARKLYEILEVEPGDLLSWNAAGNAFFVRDIDRFSKEILMKYFRHSKFASFQRQLNLYGFRKITRGSDAGSYAHQYFRKGKPDLLSLVRRSQSSSS 110          
BLAST of mRNA_P-littoralis_Contig641.7.1 vs. uniprot
Match: A0A7S2BSE7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BSE7_9STRA)

HSP 1 Score: 125 bits (313), Expect = 1.920e-29
Identity = 61/120 (50.83%), Postives = 78/120 (65.00%), Query Frame = 2
Query:  452 KYPRFGRRGAPQAFPSKLYEILEGENPDIIGWTATGRGFEVRDHARLSSEVLGRFFKQDKFSSFQRQLNLYGFRKITKGGESGSYQHPHFRRGERTTLLTIRRSTKAASARVVVPVSPPS 811
            KYPR GRRGAPQ FP KLYEIL  E  DIIGWT +G+ F +++     + +L ++F+  K+SSFQRQLNLYGFRK+ KG + GSY H  F R +   L  +RR  ++A A       PPS
Sbjct:    2 KYPRTGRRGAPQVFPRKLYEILSTEREDIIGWTDSGKSFIIKEMETFVTNILMKYFRHQKYSSFQRQLNLYGFRKVQKGTDVGSYAHECFIRDQPELLTKVRRIPQSAGAFPSQSQPPPS 121          
BLAST of mRNA_P-littoralis_Contig641.7.1 vs. uniprot
Match: A0A7S2G7U9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G7U9_9STRA)

HSP 1 Score: 127 bits (319), Expect = 2.270e-29
Identity = 57/103 (55.34%), Postives = 74/103 (71.84%), Query Frame = 2
Query:  452 KYPRFGRRGAPQAFPSKLYEILEGENPDIIGWTATGRGFEVRDHARLSSEVLGRFFKQDKFSSFQRQLNLYGFRKITKGGESGSYQHPHFRRGERTTLLTIRR 760
            KYPR GRRGAPQ FP KLYEIL  E  D+IGWT++G+ F + +     +E+L  +F+  K+SSFQRQLNLYGFRKI KG ++G+Y H HF R +  +L  +RR
Sbjct:   94 KYPRTGRRGAPQVFPRKLYEILTNERSDVIGWTSSGKSFIILEMEIFVNEILMNYFRHQKYSSFQRQLNLYGFRKIQKGPDTGAYAHEHFLRDQPESLTFVRR 196          
BLAST of mRNA_P-littoralis_Contig641.7.1 vs. uniprot
Match: A0A835YGA3_9STRA (HSF-type DNA-binding-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGA3_9STRA)

HSP 1 Score: 128 bits (321), Expect = 5.210e-27
Identity = 56/110 (50.91%), Postives = 79/110 (71.82%), Query Frame = 2
Query:  452 KYPRFGRRGAPQAFPSKLYEILEGENPDIIGWTATGRGFEVRDHARLSSEVLGRFFKQDKFSSFQRQLNLYGFRKITKGGESGSYQHPHFRRGERTTLLTIRRSTKAASA 781
            +YPRFG+RGAPQAF +KL+E+L  E+PDI+ WT +G  F + D  + +SE L ++FK +  +SFQRQLNLYGFRK  KG +SG +QH  F+R     L+ +RR+ +A+ A
Sbjct:   16 RYPRFGKRGAPQAFATKLFELLSNESPDIVSWTPSGLAFRIHDMEKFTSECLIKYFKHNNAASFQRQLNLYGFRKSLKGEDSGGFQHASFQRDRPELLIEVRRTVQASQA 125          
BLAST of mRNA_P-littoralis_Contig641.7.1 vs. uniprot
Match: A0A7S2WKC6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WKC6_9STRA)

HSP 1 Score: 124 bits (311), Expect = 8.610e-27
Identity = 58/104 (55.77%), Postives = 74/104 (71.15%), Query Frame = 2
Query:  452 KYPRFGRRGAPQAFPSKLYEILEGENPDIIGWTATGRGFEVRDHARLSSEVLGRFFKQDKFSSFQRQLNLYGFRKITKGGESGSYQHPHFRRGERTTLLTIRRS 763
            KYPR G+RGAPQAF  KLYEILE E+ ++I W+ TGR F ++D     S+VL ++F+  K+SSFQRQLNLYGFRK TKG + G Y H +F R  R  L  +RR+
Sbjct:   72 KYPRTGKRGAPQAFAHKLYEILEAESTEVIAWSGTGRAFFIKDMDIFVSQVLLKYFRHVKYSSFQRQLNLYGFRKATKGQDVGGYYHHYFMRSRRDLLPFVRRT 175          
BLAST of mRNA_P-littoralis_Contig641.7.1 vs. uniprot
Match: A0A7S2R5C8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R5C8_9STRA)

HSP 1 Score: 125 bits (313), Expect = 3.510e-26
Identity = 57/106 (53.77%), Postives = 74/106 (69.81%), Query Frame = 2
Query:  446 ASKYPRFGRRGAPQAFPSKLYEILEGENPDIIGWTATGRGFEVRDHARLSSEVLGRFFKQDKFSSFQRQLNLYGFRKITKGGESGSYQHPHFRRGERTTLLTIRRS 763
            A +YPR G+RGAPQ FP KLYEIL+ E+ D I WT +G  F ++D     + VL ++F+  KFSSFQRQLNLYGFRKI+KG E+G+Y H  F R +   L  +RR+
Sbjct:   62 AMRYPRTGKRGAPQVFPRKLYEILDNESEDTISWTESGHSFVIKDMETFVTSVLMKYFRHQKFSSFQRQLNLYGFRKISKGTETGAYCHEFFARDQTDKLRLVRRT 167          
BLAST of mRNA_P-littoralis_Contig641.7.1 vs. uniprot
Match: A0A7S2CXJ7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CXJ7_9STRA)

HSP 1 Score: 124 bits (312), Expect = 7.390e-26
Identity = 58/110 (52.73%), Postives = 78/110 (70.91%), Query Frame = 2
Query:  446 ASKYPRFGRRGAPQAFPSKLYEILEGENPDIIGWTATGRGFEVRDHARLSSEVLGRFFKQDKFSSFQRQLNLYGFRKITKGGESGSYQHPHFRRGERTTLLTIRRSTKAA 775
            A+KYPR GRRGAPQ FP KLYEIL  E+ DII WT  G  F +++     +E+L ++F+  K+SSFQRQLNLYGFRKI KG ++G+Y H  F R + + L+ +RR  ++A
Sbjct:   70 ATKYPRTGRRGAPQVFPRKLYEILTLESSDIISWTENGTSFVIQEMDDFVNEILMKYFRHRKYSSFQRQLNLYGFRKIQKGPDTGAYAHEGFLRDDESQLVKVRRWAQSA 179          
BLAST of mRNA_P-littoralis_Contig641.7.1 vs. uniprot
Match: A0A835Z0U6_9STRA (HSF-type DNA-binding-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0U6_9STRA)

HSP 1 Score: 112 bits (279), Expect = 3.110e-25
Identity = 52/93 (55.91%), Postives = 63/93 (67.74%), Query Frame = 2
Query:  482 PQAFPSKLYEILEGENPDIIGWTATGRGFEVRDHARLSSEVLGRFFKQDKFSSFQRQLNLYGFRKITKGGESGSYQHPHFRRGERTTLLTIRR 760
            P  FP  L  ILE E+ DIIGW+ +GR F +R+      ++L ++FK DKFSSFQRQLNLYGFRKI KG ESG Y H +FRRG    L  +RR
Sbjct:    1 PAGFPHILASILENESADIIGWSQSGRSFGIREMNAFKDQILPQYFKHDKFSSFQRQLNLYGFRKIVKGNESGCYIHTYFRRGHPELLKQVRR 93          
BLAST of mRNA_P-littoralis_Contig641.7.1 vs. uniprot
Match: D8LU68_ECTSI (Heat Shock transcription factor (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU68_ECTSI)

HSP 1 Score: 123 bits (309), Expect = 4.760e-25
Identity = 53/100 (53.00%), Postives = 74/100 (74.00%), Query Frame = 2
Query:  461 RFGRRGAPQAFPSKLYEILEGENPDIIGWTATGRGFEVRDHARLSSEVLGRFFKQDKFSSFQRQLNLYGFRKITKGGESGSYQHPHFRRGERTTLLTIRR 760
            RFG+RG+ QAF   L++IL+ E+P +IGW+A+G+ F + D  +   E++ RFFKQ+K+SSFQRQLNLYGFRK+ +G E+G Y HP F RG+   L  +RR
Sbjct:   42 RFGKRGSGQAFALGLFQILKTEDPKVIGWSASGKAFRIGDSEKFCKEIMPRFFKQNKYSSFQRQLNLYGFRKLVRGNEAGGYMHPLFERGKPEQLSQVRR 141          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig641.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JVV9_9PHAE7.930e-10548.90HSF_DOMAIN domain-containing protein n=2 Tax=Ectoc... [more]
A0A6V1QFS1_HETAK3.550e-3057.80Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2BSE7_9STRA1.920e-2950.83Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S2G7U9_9STRA2.270e-2955.34Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A835YGA3_9STRA5.210e-2750.91HSF-type DNA-binding-domain-containing protein n=1... [more]
A0A7S2WKC6_9STRA8.610e-2755.77Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2R5C8_9STRA3.510e-2653.77Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2CXJ7_9STRA7.390e-2652.73Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A835Z0U6_9STRA3.110e-2555.91HSF-type DNA-binding-domain-containing protein (Fr... [more]
D8LU68_ECTSI4.760e-2553.00Heat Shock transcription factor (Partial) (Fragmen... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig641contigP-littoralis_Contig641:5742..15945 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2850.Phatr43051
PFAMsHSF_DNA-bind
Model size5242
Max annot lvl2836|Bacillariophyta
Hectar predicted targeting categoryother localisation
Exons4
Evalue8.5e-22
EggNOG OGsCOG5169@1|root,KOG0627@2759|Eukaryota,2XHAM@2836|Bacillariophyta
Ec32 ortholog descriptionHeat Shock transcription factor
Ec32 orthologEc-27_002110.1
Descriptionheat shock factor
Cds size1956
COG categoryK
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig641.7.1prot_P-littoralis_Contig641.7.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig641 8748..15665 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791339.313451-UTR-P-littoralis_Contig641:5741..87471680791339.313451-UTR-P-littoralis_Contig641:5741..8747Pylaiella littoralis U1_48UTRP-littoralis_Contig641 5742..8747 -
1680791339.3811429-UTR-P-littoralis_Contig641:15665..159451680791339.3811429-UTR-P-littoralis_Contig641:15665..15945Pylaiella littoralis U1_48UTRP-littoralis_Contig641 15666..15945 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791339.3283906-CDS-P-littoralis_Contig641:8747..94911680791339.3283906-CDS-P-littoralis_Contig641:8747..9491Pylaiella littoralis U1_48CDSP-littoralis_Contig641 8748..9491 -
1680791339.3383594-CDS-P-littoralis_Contig641:9699..106201680791339.3383594-CDS-P-littoralis_Contig641:9699..10620Pylaiella littoralis U1_48CDSP-littoralis_Contig641 9700..10620 -
1680791339.3525522-CDS-P-littoralis_Contig641:15193..152771680791339.3525522-CDS-P-littoralis_Contig641:15193..15277Pylaiella littoralis U1_48CDSP-littoralis_Contig641 15194..15277 -
1680791339.3632467-CDS-P-littoralis_Contig641:15458..156651680791339.3632467-CDS-P-littoralis_Contig641:15458..15665Pylaiella littoralis U1_48CDSP-littoralis_Contig641 15459..15665 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig641.7.1

>prot_P-littoralis_Contig641.7.1 ID=prot_P-littoralis_Contig641.7.1|Name=mRNA_P-littoralis_Contig641.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=652bp
MGVVHKLVRTARTTSFESKMAAASSKITPSPPAAPSTSTSATAAATPTAT
STATPASKYPRFGRRGAPQAFPSKLYEILEGENPDIIGWTATGRGFEVRD
HARLSSEVLGRFFKQDKFSSFQRQLNLYGFRKITKGGESGSYQHPHFRRG
ERTTLLTIRRSTKAASARVVVPVSPPSAGAGTPQPTVLPSNGNGNGSVSS
KNTSKNKRLRSATPSPPPATVSRGVLPWPRPAMPLTNAAMLQQQHATAAA
AAGACEGSPNGSSGTNTTGEQLKQQQWPTAAAASGTEGGSGNSWVSLPDP
ANTTSKSHTSEDVNVAAAEKAALDHQDAEVVSLLQRMATEAQDSPERKRA
ALVAQQWNVRHLEEGATPSSFEQQLQQPRFEMPKLGAPGAVAVDSIESGQ
AHQTAFTEHLYDILGYERSSAGAAHQAAGFFPSSAFIADERATAAFPRQL
QHHQQYQLGLPSPLGTASPTFSSSDGTLLHLSQPPCRNDAFGSSASANRG
SGCEGGEEMVMSEQDRQVLVARSRSGPAFTAEQDEQQVLLARSHSGPANF
NRNDEHHYHQQQQQQQHYNASLVYEPSPNRSSMGGRRGGFSSFDGTRFGS
RPSLPSSVLPPLPSLKFEQFTGGTGGSGSGAMEIEKVRRPPWHGAESSYV
N*
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mRNA from alignment at P-littoralis_Contig641:5742..15945-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig641.7.1 ID=mRNA_P-littoralis_Contig641.7.1|Name=mRNA_P-littoralis_Contig641.7.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=10204bp|location=Sequence derived from alignment at P-littoralis_Contig641:5742..15945- (Pylaiella littoralis U1_48)
TTTCGATCGATCATCTGATCGATCGGCAGGGTTCGTTCGTGTCAATCTTT ATCTTCCGTGAGACGCCGCACACCACAACCCGCAGACATCACCGCATACC TCACACTTTATACATCAGCGGTAAACCACGCTTCGCGCAACCTCTTCTTG TAGCTATCACCACCGGAGTGCGTTTGCTCTGCAGGATTCCAACGAAGAGT GCGCCCGCGACGAAGAGAGGTGTGCCGCAGATAAAAGACAGCAACACGTA GTTTTGTCATTGAAGCGACCAGTCAGCAGGATGGGCGTCGTGCATAAACT GGTCAGGACCGCAAGGACAACCTCTTTCGAGAGCAAGATGGCTGCTGCCA GCAGCAAAATAACACCGTCTCCCCCAGCGGCTCCCTCCACTTCCACCTCC GCCACAGCAGCAGCCACACCCACCGCTACCAGCACCGCAACTCCTGCATC CAAGTACCCTAGGTTTGGCAGAAGGGGGGCGCCACAAGTGAGTGTAGTAG GTCAAGATTACGGGAATGCTTCCCCTTGTCGGAGTAACTGATGTAATTTG CCGCTGATGAGTTCAGCAGATCTGGTTTTAGCATCGAACTACTTGTGCAC TTACAGCGTGATCACCATCGTCCACCATTGCTGTGCGCAACGAATTGAAC GACGGTAATCCACGTCAGGCATTCCCTTCCAAGCTGTACGAGATTCTTGA GGGCGAGAACCCGGACATAATCGGCTGGACTGCAACAGGCAGGGGGTTCG AGGTGGGCCGGTGTGCTTTGTCTTTTTTTCGCCATTATTCTCTAATTTTC TTCTCTCTTTTTGAGGTCCGTTCGGTTCCCACCATCCATCCCCAAAGCAC GAAAGCATTTCCGATTTTTTTTGTGCTCAAAGCTAGAGGGCATATCAATC GGATTGCCCAGCGTGGCATCCTGGCGTACCAGCCGACAGAGTATTGTGTC CGTTTAGTGCATGAAGTGCGAATGCATACTAGAGTTCACATCAACACATA AAATACCTATCATGCGCAATTTATTGTTGGACCCCTAAATTTGGGTCCAG CAGTAGTACAGTAGTACGAACGATGGCATGCCGAGTCGTGTCACGATCAC TGCAAAACACATCAACCAGGCTATCATGTACAAAGACTTCGAAGCTTCGA ACTACTTGTAAGACTCGCGCTTTAGGCCCGGGGTATTTATTGCACGAGGT ATCGGAGCGAGTGAATCTCAAAATCGTACATCTATCCAGAGCAACATTGC CTCCCCGTTGATTTATCCCTTCCGGTGCTTGTGCTAAGCCTGCTGATTAC GTACAGCTGGCGCAAACCCCCCATCCGTTCCTTCTCCTCTTATGATATTT ACACATGCTTTTGTATAAGTGCAGCTACATTGTGTACTCGAACCATGTCT GATCAACAACTTGCTCCTCTCCAAAATCGGCATAATCTTGTTCGGATTAA TTGATTTATACCTACCCGTATATGAAAAGATTTGTACGAAGTACTTTGTA CTTCGAAGTACTTACCCGCATCATATCATATGATCTTACTTCGAAGTTCA AAGTGTTTCTATTCTCAATTACAGCAGTGGTACGAAAGTATCATCGTTAC TACAACTGCTTAATATCGAACCAGGAATGTGATGGTTGCATTTGCCGCTC CTCTTCACAGCAAGTACCCTGGCCGGCTTTCTGCGCAGCAGACCCCTTCT TCCCCGCCGACCTGCACCTGGACCAGAATCATTACAAGTATCGCCTATTT ATTGTCTTCCGTGGGTGTCGCACAACGTGGAGCACAGCACAGCAGCGGCC ATTTTTTCTGCCCGTTGCTGTCCGGCTAGGGTTTACCTCTTCATTTTTCA TGAATGTGACCTGCTGCAAGACGCACTCGTGTGGACAATGGTTTTTGGAA CGAAGGAGTACAAATGTCGATGGTATATGGCTTGCTCCCACAAGTCACAT ACTCCATACCAATATTTTGCCCAAGCATTTATTTTACTGCTATTTTTGAA TTTGTGCCGCATATATATATGATATGCCAACGGACGACACCAAGACGCAC ATCCCACAGACTCACATCCCCACAAAAGCGCTATGCCAGCTCGGCTGCCA TCACTGCTGCTCCTACTGCTACTTGTGGTGGGTGGTCAGCGTGTTGCTTC ATCGTCGTCTGTTGCTTCACGGTGAACAATTTCTTGTTCTCTAGCGCGAG GTTGATCGACGTCTTGACGTAATCATTATATACCAGGGGGAGCGGTAGTA CTTCGTCTACGTTGATGTCCATGGCTGTGGTGCGCCGTGCTGTTCGGGTT GCTCTGTGTGCCGTCTGCTGAATCGCTGTTGACGCGTTTGAGCATTGTAG CGGAACCGTCCGTGGACAGTCTCGTTTCGCGCGCGGATTTGAATTGTGTT GCCCAAACGCCGCTCGGGAACCAGTGAAACCCAACTTTTTTTCTGATAAA TATTTTATGACACATAAGATTCGGGCCGTCGAGACACCTCGTCATTTTTG ATGAGATCATTTTTGATCAAAAATAATCTGATCAGATATTACACATAATA AGAATCTTATGTGTCATAAAATATTTATCGAGCTGTGTTTATCAGAAAAA AAGTTGGGTTTCGTAGGTTCCCGAGCGGCGTTTGGGCAACACAATTCAAA TCCGCGCGCGAAACGAGACTGTCCACGGACGGTTCCGCTACAATGCTCAA ACGCGTCAACAGCGATTCAGCAGACAGACGGCACACAGAGCAACCCGAGC AGCACGGCGCACCACAGCCATGGACATCAACGTAGACGAAGTACTACCCC TGGTATATAATGATTACGTCAAGACGTCGAACAACCTCGCGCTAGAGAAC AAAAAATTGTTGACCGTGAAGCAACACGCTGACCACCCACCACAAGTAGC AGTAGGAGCAGCAGTGATGGCAGCCGAGCTGGCATAGCGCTTTTGTGGGG ATGTGAGTCTGTGGGATGTATGTGCGTCTTGGTGTCGTCCGTTGGCATAT CATATATGCGGCACAAATTCAAAAATAGCAAAAATGATGAACAAAAAAAA TGATCTGTCCAGATCATTTTTTCCAAGTTTTCTGATCAACTCGGGCGATC AGAAACCCAGATCATTTTTTTTTCGATCAAAAAAGGCGCAAAAATGACAC ATGAGAAGCCGGATGTGACACCTAGATCATTATTGATCAAAAATAATCTG GCGAAAATGACACATAATAAGTAGCCTAAGGCTACTTATTATGTGTAATA TCTGATCAGATTATTTTTGATCAAAAATGATCTCATCAAAAATGACGAGG TGTCTCGACGCCCCGAATCTTATGTGTCATAAAATATTTATCAGAAAAAA AGTCGGGTTTCGTAGGTTCCCGAGCGGCGTTTGGGCAACACAATTCAAAT CCGCGCGCGAAACGAGACTGTCCACGGACGGTTCCGCTACAATGCTCAAA CGCGTCAACAGCGATTCAGCAGACAGACGGCACACAGAACAACCCGAGCA GCACGGCGCACCACAGCCATGGACATCAACGTAGACGAAGTACTACAATG ATTACGTCAAGACGTCGATCAACCTCGCGCTAGAGAACAAAAAATTGTTG ACCGTGAAGCAACACGCTGACCACCCACCACAAGTAGCAGTAGGAGCAGC AGTGATGGCAGCCGAGCTGGCATAGCGCTTTTGTGGGGATGTGAGTCTGT GGGATGTATGTGCGTCTTGGTGTCGTCCGTTGGCATATCATATATGCGGC ACAAATTCAAAAATAGCAAAAATGATGAACAAAAAAATGATCTGTCCAGA TCATTTTTTCCAAGTTTTCTGATCAACTCGGGCGATCAGAAACCCAGATC ATTTTTTTTTCGATCAAAAAAGGCGCAAAAATGACACATAAGAAGCCGGA TGTGACACCTAGATCATTATTGATCAAAAATAATCTGGCGAAAATGACAC GTAATAAGTAGCCTAAGTAGCCCAAGAAGAAAAGTAAAAACAAAAACCCT GAAAAAAGCAAAAAGCAAAAAACTAGAGGGAATATTTTCTGCGTTCCCAA CTTATCTTACACAACAGAAGGACATCCGCTGATCATTGTAGATACGTCGT ACATTTGATATTATACTGCTGTACATACGTACTCGAACGCACACATGAAA TCCGAGGAATGTACATGTATCATATGTTATGTACCGGTGTACCTTGTATG CTGCGCTACGCTGTACTGTACAAGATACGACAAAGTACGAAGTAGAACCT TATTTTGAAGTCGGTTGTGTCGTGGTTGCTATACAAGGAGGTATACACAC CTGATGGTAGTTGTGGAGGAACCGCACTCAAATTGAAGTCGATTTATGAT ATCGTGTAGTATGTACAAAGCACGATTTCTCGCTTTGTTGTCCGTTAATT GTATGACATTATGTAATTCCAACTGGTGTTATCGTTTTTGTCTTTGACCG AGTTGGACCAGTCTACAGCAGTCGGATTTTATTTTTTTCACACAAATCTA ATACCGCCGTGGTGGCCCCAGTGTTCAAGCGGTTCCCTAGATACGGTAAC GTTCTTCAATATTAATTTGTTCTATTATTGTTGACGATTTTTTTATGAAA ATAAAACTTCCAAATATTTACGTAGTAAGTACCCAGTATAATTTATCGGT TTCTTCGATTTCTTTTACAATTTGCTGTAAACCTGAAAAGGGTGGATTAT TTTGTGAAAAATATTTGGGCCATAATGGTAAAAAAAAAATATGAGGAAGT TTGCGGATTCGATGCTGTCTGAGCCTTTTCTTTGCGACTTTTCCTTGCGA CGTTAAAGCAGAGAGGGATTTATTCGTAATTAAACAGAGAGGGAAGGGAT TGCTGAAACCATTTCGCGTAAAAAACCAAGGGCAAGTACCGCACGAGGGA AGGTGGCGGCTAAAAAACAAAATGGATAAACATGAAAGCGCATGTGTGAC CTCCCTTCTGTGTGACTACAGTAGCGCAGCCACTTCATGCTCATCAGTTA TTGAAGCTCAACACGGAACATTTTGGAGGTTGCCTTGTTTGACACACCTT ACACCACGGGTGAGTGTGTGTGTGCTGTCAGCTTTTGAAATCGATTCGTG AGTGCCTCATTCATAACAGCTTTGGATATTGACGCTGTGTTGTATCTAGC CTCCGTGCAGTCCGTGAGTCGTTTAGACAAAACAAGTCTACCGCCGAATG CATGCAGATTTATCCACAGCAGTTTCGTCCTGTACAAAAAATATCTCTCA TCCTTTTCAAACCGATTAACACTACGATGTATCAAGTCAAACTGAATACA TTAAATTACACGCTCTGAAATGCAGGTCCGGGACCACGCTCGGTTAAGCT CCGAAGTGCTGGGCCGGTTCTTCAAGCAGGACAAGTTCTCCAGCTTTCAG CGCCAACTCAACCTTTACGGCTTCCGCAAGATCACCAAGGGCGGCGAGAG CGGCTCCTACCAGCACCCTCACTTCCGCCGCGGGGAGCGCACTACCCTTC TCACCATCCGCCGATCGACCAAGGCTGCCTCCGCCCGCGTCGTGGTGCCG GTCTCGCCGCCATCCGCGGGCGCCGGCACCCCACAACCCACGGTCCTGCC GAGCAACGGCAATGGTAACGGCAGCGTGTCCTCCAAAAACACGAGCAAAA ACAAGCGGTTGAGATCGGCGACCCCGAGCCCGCCCCCTGCAACCGTGTCT CGAGGGGTGCTCCCATGGCCTCGCCCTGCCATGCCCCTCACCAATGCTGC GATGTTGCAACAGCAGCACGCGACGGCGGCGGCGGCGGCAGGCGCTTGCG AGGGCAGTCCGAACGGCAGTAGCGGCACAAACACCACGGGCGAGCAGCTG AAGCAGCAACAGTGGCCGACCGCCGCTGCCGCCTCCGGCACTGAGGGCGG CAGCGGCAACAGCTGGGTATCGCTCCCTGATCCCGCAAACACGACTTCAA AGAGCCACACCAGTGAAGATGTGAATGTAGCCGCCGCGGAAAAGGCTGCG CTGGACCACCAGGACGCCGAGGTCGTGAGTCTGCTCCAGCGGATGGCAAC AGAGGCCCAAGACAGCCCGGAGCGGAAGCGAGCCGCCTTGGTGGCGCAGC AGTGGAACGTAAGGCACCTTGAGGAGGGGGCTACCCCCTCTTCCTTTGAG CAGCAACTGCAGCAGCCCCGGTTTGAGATGCCCAAGTTGGGTGCACCAGG AGCTGTAGCAGTGGATTCGATTGAATCCGGCCAGGCGCATCAAACGGTGA GTTACGCTCATTTTTTTCCCCCCGTCCAGTAGTACGTTCATCAGTGGTCA TCTTTGAGAGTGCGTTTCGACGTGTCCGTTGCCCAGGTATTGTTGTTTGT GGAGGTTGTATGAATGAAGCAGGCAATTTATTAACAAGCGTGAACCCTCT GACTCCTCGCGTACCCACACGCGCGCACGTGCTGATATTTTTTTATACCT GAAGGCATTCACCGAGCATTTGTACGACATCCTCGGCTACGAGCGCTCCA GCGCCGGCGCTGCACACCAGGCGGCGGGTTTCTTCCCGTCGTCGGCGTTC ATCGCGGACGAGAGAGCAACTGCAGCGTTCCCGCGGCAGCTGCAGCACCA TCAGCAGTACCAGCTCGGACTCCCCTCGCCACTCGGCACAGCCTCTCCGA CCTTTTCATCCTCCGACGGCACACTGTTGCACCTGTCGCAGCCGCCCTGC CGCAACGATGCGTTCGGGTCGTCAGCCTCGGCCAATCGCGGCAGCGGCTG CGAAGGGGGAGAGGAGATGGTTATGTCGGAGCAAGACCGACAGGTTCTTG TTGCACGCTCGCGGTCGGGCCCCGCGTTCACCGCAGAGCAAGATGAACAA CAGGTTCTGCTTGCGCGCTCGCATTCCGGCCCTGCCAATTTCAACCGCAA CGATGAGCACCACTATCATCAGCAGCAGCAACAGCAGCAGCATTACAACG CCAGTCTCGTGTACGAACCCAGCCCCAACAGGTCGTCGATGGGAGGAAGA CGGGGGGGGTTCTCCTCTTTCGACGGCACCAGGTTCGGGTCGCGGCCGTC GTTGCCGAGTAGCGTGTTGCCGCCGCTCCCCAGCCTCAAATTCGAGCAGT TCACCGGTGGTACTGGCGGCAGCGGTAGCGGCGCCATGGAGATAGAAAAG GTGCGCCGGCCCCCCTGGCACGGGGCCGAGTCTTCTTACGTCAATTGATT GTGTGATGACCTGGTATCTTTTGTGGTACGACGAAATGAACACGTCTGCT TGTCGCTCGACATCATGAACGCCGTTGCACAGGCGTTTTCTCAGTATTGA GGCCAGAGAGGACGGGAATGTAGAGTGTTGTTTCTGACAGGCCAGTTATG TTGATAGGGCAAGCGTAGGACGAGATGGTAGCAACAGCCCCGTGCTGGAA ACCACGGCGGTTTTACTTTGGAGGGTGCGGGGTAAGGAAAAGATATTCCG GCAGCGCTGTGCTGGGAGATGAACAAAAACAGTATACAAAGGTGGCGCTT CAAAAGCGCGGCGAAGGTAATCTCAGGGGGGCCTTTTTTTTTTTACCTTT GACTTTATTGCTGTGGTGACAGTGAGAAGTATGCCGTTGTGCTCCGGCAG ATGGATCGTTTGTTGGTGGTGTGGGGTGATGTAGCACATCTCGAAAATTC CAGGTGCTGCTAGGTGTTTATTTTCTTGTGGTTCGATTGCGCCAACCGAG AGAGGGCAAATATGGCCCCCGTAGGATATGTAGCGCCCACACGGATTAAA TAAAAGTTCTGGCCGGATGTGGACGTTCGCCGCACGAGATATGGTGTAGA CTCTTTTTAATTTAGACGCGGTCCGTGCAACAAGAGATATCAGTGTGATA CTAGATGGTGAGCTCAAGAGAAGATGTTGAGAACGGTTCGTCATCATCCT GCTGTACAAGAAGTACACGCGGATCTGGGCGGTGACTAGCGTGCCCACCG TCGATACAAGAATGATTTAGATTTGTGTTTTTAGTCACCCCCCTCCTCCC TTCCGAACATTGATATCAGCCTGGTTTGATGTCCCGAACACACCGGCTGT GTGTTGCGCTTGGCGTTCTTCCTCTTGGATTGTTGTTTTTAACTCGGGTG GCAGGAAGGAAGGCATGCTAGGACACGCACAGGTTTTACGGCAACACGCG TGAAATATTCGGGAGGGCCGATATGTGGTGGCATGTTAGCGTGTATTTGT GTTCGTTTGCGTCGTATTGTAGTGGACGAAAATATCCCGCTCATCCGCGT AGAACATCCCGTGTCGTTGCAAGTAACTTATATGGCGAACTTGGTGGACG TTCGTTGAAACTACTCCGGCTTTTGATTTGATTTCACGCCAATGGTGTGG TACAATAACGTCGTTAACACAGCAGTAGATGCCAAAGACTGTAGGCGGCG GTCAGCCCCCATGTGTAGTAGCGCAAAAAAAAAATACAAACGTAGGTATG ATACGTATATCATGCTTGTTTCTGTTTTGCACTCATGTACGGTGACGGAG GGAGGATTGGTAAATGTGCGCACACTTTCCGAAACAATTTGGTCGGGAGC TGTGCGTGCACTTAAAATTGGTTTTGGATTATCATCCATGCAATGGTTTT TGGTTTCTCCGCGCGGCGGATTGGATAGGACATATTTTTGGTTCTTGGCT TTGTTTTGTCGTTTGTTCCTGCTATTTTTTGTGACTTTTCTTTCAGAATT TTCCTCCGCTCGGGTTCTAGTGGGTGAGAAAGATTTGGCCGGGTGGGTGT TGTTTCTGAATTTGCGTGCTGCTGCTCGGCGCCAGACAGACGGGTTTTTA TTGTTTGTATCATGAAACCATCTGTGGTGCACCTCCTGTTGTATTTGTCG GTTGTCGGTGTATCATTGCGTGTCTTTTTTTGTTTTTGGACCGTGGAGTT GATTGGTTTGGAACTGAAGCGTTGTTTGAAAGTGCGATAGAGTTGAACTC TTCCTGTACGCCCTTTCGTCGTCGCCGGGTGTTGAACTGACGTTGCCCTA CTGCATGAGCTCGAAAAAGAATGTAGAGGCTGTTTGCCCGTGAGAGCACA AACATGCATATAACATTTAGTGTGACAGAAATTGATGATTTTCGTGTGAG AAGTTTTTGTGTAATGGGTGTTTGTATGTGGGATGCACTAGGTTGAGCGT GTCGGTTCTCTTCACATACTTATATCGACGAGCGGGGTTCAGGGAGGCAC GCACGACCTCTAGTCGGTCTATGATGTGTTCCCCCCCTTTGCCAAGTCAG TACGAATGTTGTGCAGAAGTTTGGCGGGCGCCGAAGTAAGAAGGTACGAT GCTTGTGATGCTACATCATGAAGTAGATCATCACAATTCATGATGATTGT CAGTTTCCCTTTTCATGCATTTTGTATTTTATTTTTGCTCTGTTTTCTTT TACCAGTCGAGAACTCGCCACACTTTAACGATATTTTCGATGTGAGAGGT GACCTTTAGTGCAGGGTCTGCTTCGAGTGGGGATTTTGTTGATAAGAAGC AGCAGCGAGCGAGATGGGTAGCTGTAGTGTTTAAAAACCGTGTTGACCTA GCTGTATGCCCTCGTGCACTATGCCAGATTGTGAAGGAATGTAGCCCAAA GCAGAAATGTCTACAGGCGTGGTAGTCACAGGCACACGTGGCAGATGGGA TGACCAGTGGATGGGGGAAAAATACCAGTGAGTCGAGACAGGATGTATTT TGCCATGAATGTAAATCACTTTGATGGAGAAAATTAGTTTCTCCACAAGA CCGTCTCTCTGTCGGGCGACTTGTTTGTCCTCACGGATATATACCAGGTA CACAGGTTTCGTGATGTGGTCTTCATTGAAATTTGGTGTGGACAAAAGCT CCCAGTACAGCCCCCAAGGGTGCAAACCGCCGCACTGCGACTTTCACCAC CGAGACCGAATGCCCGTGTCACAAAACGAGGGCTACCTAGGGCATCGAAA TCGGTCGCGGCAAACCGTTGGTAGGGTTCTGAAGTCTTCTGACGTGGCAG CAAAAAATATACTCCCATCGGTACCCGGCAGCTACAGGCTGCTTCACGCA AGAAGATACAAAAGTATTCAACATCGTTTTCTCACGCGGTTTTTTCGAGT TAGATCCTGAAAGTTTGCACACATGTTCGTTGGGTCACTGCGAAAAATCG GAAGACTGGGGTGATTCGATTTTTTTTCCAAAAATTATACTCCGAGTATT AGTT
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Coding sequence (CDS) from alignment at P-littoralis_Contig641:5742..15945-

>mRNA_P-littoralis_Contig641.7.1 ID=mRNA_P-littoralis_Contig641.7.1|Name=mRNA_P-littoralis_Contig641.7.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1956bp|location=Sequence derived from alignment at P-littoralis_Contig641:5742..15945- (Pylaiella littoralis U1_48)
ATGGGCGTCGTGCATAAACTGGTCAGGACCGCAAGGACAACCTCTTTCGA
GAGCAAGATGGCTGCTGCCAGCAGCAAAATAACACCGTCTCCCCCAGCGG
CTCCCTCCACTTCCACCTCCGCCACAGCAGCAGCCACACCCACCGCTACC
AGCACCGCAACTCCTGCATCCAAGTACCCTAGGTTTGGCAGAAGGGGGGC
GCCACAAGCATTCCCTTCCAAGCTGTACGAGATTCTTGAGGGCGAGAACC
CGGACATAATCGGCTGGACTGCAACAGGCAGGGGGTTCGAGGTCCGGGAC
CACGCTCGGTTAAGCTCCGAAGTGCTGGGCCGGTTCTTCAAGCAGGACAA
GTTCTCCAGCTTTCAGCGCCAACTCAACCTTTACGGCTTCCGCAAGATCA
CCAAGGGCGGCGAGAGCGGCTCCTACCAGCACCCTCACTTCCGCCGCGGG
GAGCGCACTACCCTTCTCACCATCCGCCGATCGACCAAGGCTGCCTCCGC
CCGCGTCGTGGTGCCGGTCTCGCCGCCATCCGCGGGCGCCGGCACCCCAC
AACCCACGGTCCTGCCGAGCAACGGCAATGGTAACGGCAGCGTGTCCTCC
AAAAACACGAGCAAAAACAAGCGGTTGAGATCGGCGACCCCGAGCCCGCC
CCCTGCAACCGTGTCTCGAGGGGTGCTCCCATGGCCTCGCCCTGCCATGC
CCCTCACCAATGCTGCGATGTTGCAACAGCAGCACGCGACGGCGGCGGCG
GCGGCAGGCGCTTGCGAGGGCAGTCCGAACGGCAGTAGCGGCACAAACAC
CACGGGCGAGCAGCTGAAGCAGCAACAGTGGCCGACCGCCGCTGCCGCCT
CCGGCACTGAGGGCGGCAGCGGCAACAGCTGGGTATCGCTCCCTGATCCC
GCAAACACGACTTCAAAGAGCCACACCAGTGAAGATGTGAATGTAGCCGC
CGCGGAAAAGGCTGCGCTGGACCACCAGGACGCCGAGGTCGTGAGTCTGC
TCCAGCGGATGGCAACAGAGGCCCAAGACAGCCCGGAGCGGAAGCGAGCC
GCCTTGGTGGCGCAGCAGTGGAACGTAAGGCACCTTGAGGAGGGGGCTAC
CCCCTCTTCCTTTGAGCAGCAACTGCAGCAGCCCCGGTTTGAGATGCCCA
AGTTGGGTGCACCAGGAGCTGTAGCAGTGGATTCGATTGAATCCGGCCAG
GCGCATCAAACGGCATTCACCGAGCATTTGTACGACATCCTCGGCTACGA
GCGCTCCAGCGCCGGCGCTGCACACCAGGCGGCGGGTTTCTTCCCGTCGT
CGGCGTTCATCGCGGACGAGAGAGCAACTGCAGCGTTCCCGCGGCAGCTG
CAGCACCATCAGCAGTACCAGCTCGGACTCCCCTCGCCACTCGGCACAGC
CTCTCCGACCTTTTCATCCTCCGACGGCACACTGTTGCACCTGTCGCAGC
CGCCCTGCCGCAACGATGCGTTCGGGTCGTCAGCCTCGGCCAATCGCGGC
AGCGGCTGCGAAGGGGGAGAGGAGATGGTTATGTCGGAGCAAGACCGACA
GGTTCTTGTTGCACGCTCGCGGTCGGGCCCCGCGTTCACCGCAGAGCAAG
ATGAACAACAGGTTCTGCTTGCGCGCTCGCATTCCGGCCCTGCCAATTTC
AACCGCAACGATGAGCACCACTATCATCAGCAGCAGCAACAGCAGCAGCA
TTACAACGCCAGTCTCGTGTACGAACCCAGCCCCAACAGGTCGTCGATGG
GAGGAAGACGGGGGGGGTTCTCCTCTTTCGACGGCACCAGGTTCGGGTCG
CGGCCGTCGTTGCCGAGTAGCGTGTTGCCGCCGCTCCCCAGCCTCAAATT
CGAGCAGTTCACCGGTGGTACTGGCGGCAGCGGTAGCGGCGCCATGGAGA
TAGAAAAGGTGCGCCGGCCCCCCTGGCACGGGGCCGAGTCTTCTTACGTC
AATTGA
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