mRNA_P-littoralis_Contig64.138.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig64.138.1
Unique NamemRNA_P-littoralis_Contig64.138.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig64.138.1 vs. uniprot
Match: Q8QNJ1_ESV1K (EsV-1-82 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNJ1_ESV1K)

HSP 1 Score: 258 bits (660), Expect = 6.850e-84
Identity = 122/178 (68.54%), Postives = 150/178 (84.27%), Query Frame = 1
Query:    7 TKTSINIEELKQWPFPEQAFLGRGSFGTVMRGLYCNTPVAVKELLTGKEQMVELRRQALAELLEEISILMEFRHPHIVCMVAFNSTYEHGMTTHIVMEMYKGNARKLHSLDEVAVVGRDCMRGLAYMHLHDKCFIHGDIKPENILVNYDSFKNITKAALGDLGLARSCVQCLTKKEFR 540
            T +++N+ +LK+WPFPEQ FLGRG+FG VMRGLYC TPVAVKELLTG++QM ++RRQA  ELL+EI ILMEFRHP+IVCM+A++S Y       IVM+MYKGNA+KL S+DEVAVVGRDCMRG++YMHLHD+C +HGDIKP+NILVN DS   + KAALGD+GLARSC +C+  K FR
Sbjct:    2 TPSAMNLRQLKRWPFPEQEFLGRGAFGNVMRGLYCGTPVAVKELLTGQDQMSDVRRQAKEELLKEIGILMEFRHPNIVCMIAYDSRY-------IVMDMYKGNAKKLRSVDEVAVVGRDCMRGISYMHLHDRCVVHGDIKPDNILVNIDSKGIVYKAALGDVGLARSCAKCMRTKGFR 172          
BLAST of mRNA_P-littoralis_Contig64.138.1 vs. uniprot
Match: D8LPB3_ECTSI (EsV-1-82 [Ectocarpus siliculosus virus 1] n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPB3_ECTSI)

HSP 1 Score: 249 bits (636), Expect = 2.710e-80
Identity = 119/173 (68.79%), Postives = 143/173 (82.66%), Query Frame = 1
Query:   19 INIEELKQWPFPEQAFLGRGSFGTVMRGLYCNTPVAVKELLTGKEQMVELRRQALAELLEEISILMEFRHPHIVCMVAFNSTYEHGMTTHIVMEMYKGNARKLHSLDEVAVVGRDCMRGLAYMHLHDKCFIHGDIKPENILVNYDSFKNITKAALGDLGLARSCVQCLTKKEF 537
            +N+++LK+WPFPEQ FLGRG+FG VMRGLYC TPVAVKELLTG+ QM ++RRQA  ELL+EI  LMEFRHP+IVCM+A++S Y       IVM+MYKGNA+KL S+DEVAVVGRDCMRG++YMH H +C +HGDIKP+NILVN DS   I KAALGD+GLARSC +CL  K F
Sbjct:    1 MNLDQLKRWPFPEQEFLGRGAFGNVMRGLYCGTPVAVKELLTGQGQMPDVRRQAKEELLKEIGTLMEFRHPNIVCMIAYDSRY-------IVMDMYKGNAKKLRSMDEVAVVGRDCMRGISYMHRHGRCVVHGDIKPDNILVNIDSKGTIYKAALGDVGLARSCAKCLRTKGF 166          
BLAST of mRNA_P-littoralis_Contig64.138.1 vs. uniprot
Match: A0A0S4IR96_BODSA (Protein kinase, putative n=1 Tax=Bodo saltans TaxID=75058 RepID=A0A0S4IR96_BODSA)

HSP 1 Score: 75.1 bits (183), Expect = 9.200e-13
Identity = 53/150 (35.33%), Postives = 82/150 (54.67%), Query Frame = 1
Query:   67 LGRGSFGTVMRGLYCNTPVAVKELLTGKEQMVELRRQALAELLEEISILME--FRHPHIVCMVAFNSTYEHGMTTHIVMEMYKGNARKLHSLDEVA--VVGRDCMRGLAYMHLHDKCFIHGDIKPENILVNYDSFKNITKAALGDLGLAR 504
            LG+G F TV  G +C  PVAVK +LT + Q      +AL E+  E+++L     RH +++ ++ F     H     ++  +   N  +L  L      +V  D  RGLA  HLH   F+H D+KP+N+L+ +D  +NI +A +GDLG A+
Sbjct:   40 LGKGGFSTVYEGEFCGFPVAVK-ILTVRNQ----NERALFEI--ELAVLCNERLRHRNLLPLIGFC----HERPALVMPRLKPLNKDRLPRLPGSVRMLVAMDVARGLA--HLHQAGFVHNDMKPDNVLLEFDENRNIVRALVGDLGCAK 176          
BLAST of mRNA_P-littoralis_Contig64.138.1 vs. uniprot
Match: UPI000625179F (serine/threonine-protein kinase pelle-like isoform X1 n=2 Tax=Athalia rosae TaxID=37344 RepID=UPI000625179F)

HSP 1 Score: 74.3 bits (181), Expect = 2.750e-12
Identity = 58/158 (36.71%), Postives = 81/158 (51.27%), Query Frame = 1
Query:   67 LGRGSFGTVMRGLYCNTPVAVKELLTGKEQMVELRRQA----LAELLEEISILMEFRHPHIVCMVAFNSTYEHGMTTHIVME--------MYKGNARKLHSLDEVAVVGRDCMRGLAYMHLHDKCFIHGDIKPENILVNYDSFKNITKAALGDLGLAR 504
            LGRGSFGTV +G++ NTPVA+K L    EQ V     +    L + L E++IL  +RH +I+ + A++   E     +  M           K   + L  L    +  +   RGL Y+H  DK  IHGDIK  NIL++    KN  +  +GD GLAR
Sbjct:  239 LGRGSFGTVFKGIWKNTPVAIKRL----EQRVSDTNGSYVTQLQQSLRELNILNSYRHDNILPLYAYSMGPEPPCLVYQFMPNGSLQDRLQLKYRTKPLTWLQRHEIA-KGTARGLQYLHTRDKPLIHGDIKSANILLD----KNF-EPRIGDFGLAR 386          
BLAST of mRNA_P-littoralis_Contig64.138.1 vs. uniprot
Match: UPI0007384A2A (serine/threonine-protein kinase pelle isoform X1 n=3 Tax=Diachasma alloeum TaxID=454923 RepID=UPI0007384A2A)

HSP 1 Score: 72.4 bits (176), Expect = 1.280e-11
Identity = 56/161 (34.78%), Postives = 80/161 (49.69%), Query Frame = 1
Query:   58 QAFLGRGSFGTVMRGLYCNTPVAVKELLTGKEQMVELRRQALAELLEEISILMEFRHPHIVCMVAFNSTYEHGMTTHIVMEMYKGNARKLHSLD-----------EVAVVGRDCMRGLAYMH-LHDKCFIHGDIKPENILVNYDSFKNITKAALGDLGLAR 504
            Q  LGRG FGTV RGL+ NT VA+K++     +  E   Q L +LL E++IL    H +I+ + AF+     G     ++  +  N      L            E   + +   RGL Y+H + +K  IHGDIK  NIL++    KN  +  +GD GLAR
Sbjct:  232 QLVLGRGGFGTVFRGLWKNTEVAIKKIERKGPETDESYMQQLQQLLRELTILNSRPHENILSLYAFSM----GGDAPCLVYQFMANGSLADRLQLRHGTQPLTWLERHEIAKGTARGLQYLHEIGEKPLIHGDIKSANILLD----KNF-EPRIGDFGLAR 383          
BLAST of mRNA_P-littoralis_Contig64.138.1 vs. uniprot
Match: A0A499U4D3_PLAST (Serine/threonine-protein kinase pelle n=1 Tax=Plautia stali TaxID=106108 RepID=A0A499U4D3_PLAST)

HSP 1 Score: 71.2 bits (173), Expect = 3.430e-11
Identity = 51/155 (32.90%), Postives = 78/155 (50.32%), Query Frame = 1
Query:   67 LGRGSFGTVMRGLYCNTPVAVKELLTGKEQMVELRRQALAELLEEISILMEFRHPHIVCMVAFNSTYEHGMTTHIVME--------MYKGNARKLHSLDEVAVVGRDCMRGLAYMH-LHDKCFIHGDIKPENILVNYDSFKNITKAALGDLGLAR 504
            LG+G FGTV +G++ NT VA+K L   KE+M E  +    + L E+  L  +RH +I+ +  ++    H    +  M         + + + + L S  +  ++     RGL Y+H + DK  IHGDIK  NIL++      I     GD GLAR
Sbjct:  216 LGKGGFGTVYKGIWKNTEVAIKRLEVQKEEMDESCKTHRKQSLRELRCLNSYRHDNILPLYGYSIGGSHDCLVYQYMTNGSLEDRLLCRDDTKPL-SWSQRVIIATGTARGLQYLHTIGDKPLIHGDIKSANILLDPYLVPKI-----GDFGLAR 364          
BLAST of mRNA_P-littoralis_Contig64.138.1 vs. uniprot
Match: A0A834KS43_VESGE (Protein kinase domain-containing protein n=3 Tax=Vespula TaxID=7451 RepID=A0A834KS43_VESGE)

HSP 1 Score: 70.9 bits (172), Expect = 4.350e-11
Identity = 58/172 (33.72%), Postives = 86/172 (50.00%), Query Frame = 1
Query:   16 SINIEELKQWPFPEQAFLGRGSFGTVMRGLYCNTPVAVKELLTGKEQMVELRRQALAELLEEISILMEFRHPHIVCMVAFNSTYEHGMTTHIVME--------MYKGNARKLHSLDEVAVVGRDCMRGLAYMH-LHDKCFIHGDIKPENILVNYDSFKNITKAALGDLGLAR 504
            S N  E+    + +   LG+G FGTV RG + NT VA+K L   K    E     L + L+EI IL  + H +I+ + A+N   +     + +M+        + K  +R L  L    +  +   RGL Y+H +  K  IHGDIK  NIL++    KN+ +  +GD GLAR
Sbjct:  217 SYNELEIATNGWLKHNILGKGGFGTVYRGTWKNTNVAIKRLEYKKTNSDESYLVQLQQSLKEIEILNSYPHENILSLYAYNLDGQVPCLVYQLMQNGSLEDNLLLKHKSRPLSWLQRHEIA-KGTARGLQYLHTIGKKPLIHGDIKSANILLD----KNL-EPKIGDFGLAR 382          
BLAST of mRNA_P-littoralis_Contig64.138.1 vs. uniprot
Match: UPI001F5EB2EE (LOW QUALITY PROTEIN: interleukin-1 receptor-associated kinase 1-like n=2 Tax=Schistocerca TaxID=7008 RepID=UPI001F5EB2EE)

HSP 1 Score: 70.9 bits (172), Expect = 4.910e-11
Identity = 49/157 (31.21%), Postives = 78/157 (49.68%), Query Frame = 1
Query:   55 EQAFLGRGSFGTVMRGLYCNTPVAVKELLTGKEQMVELRRQALAELLEEISILMEFRHPHIVCMVAFNS-------TYEHGMTTHIVMEMYKGNARKLHSLDEVAVVGRDCMRGLAYMHLHDKCFIHGDIKPENILVNYDSFKNITKAALGDLGLAR 504
            +   LG+G FGTV +G++ NTPVA+K L    E     + Q + + L E+ +L   RH +I+ +  F+         Y++     +   +   N     S D+   +     RGL ++H + K FIHGDIK  NIL++ +      +  +GD GLAR
Sbjct:  286 KHTILGKGGFGTVFKGIWKNTPVAIKRLEQRTESDESYQAQ-IEQSLRELRVLNACRHDNILPIYGFSMGGDEPCLVYQYMPNGSVEDRLLCRNGTPPLSWDQRHNIAEGTARGLQFLHNNKKPFIHGDIKSANILLDTNF-----EPRIGDFGLAR 436          
BLAST of mRNA_P-littoralis_Contig64.138.1 vs. uniprot
Match: A0A182QDR7_9DIPT (Protein kinase domain-containing protein n=1 Tax=Anopheles farauti TaxID=69004 RepID=A0A182QDR7_9DIPT)

HSP 1 Score: 69.7 bits (169), Expect = 1.080e-10
Identity = 61/182 (33.52%), Postives = 85/182 (46.70%), Query Frame = 1
Query:   19 INIEELK----QWPFPEQAFLGRGSFGTVMRGLYCNTPVAVKELLTGKEQMVELRRQALAELLEEISILMEFRHPHIVCMVAFNSTYEHGMTTHIVMEMYKGNARKLHSLDEVAVVGRDCM---------------RGLAYMH-LHDKCFIHGDIKPENILVNYDSFKNITKAALGDLGLAR 504
            I+ EEL      W   E+  LG+G FGTV RG++ +T +A+K++   K +  E  R  L +   E+  L   RH +IV +  ++   E      +V +   G      SLD+     R                  RGL Y+H   DK FIHGDIKP NIL+N   FK   +  +GD GL R
Sbjct:  195 ISYEELAAATDNWS--ERNILGKGGFGTVYRGVFKHTSMAIKKIDYNKVKTSEAERIQLQQSFNELRYLNSCRHDNIVPLFGYSLDKE----PCLVYQFMPGG-----SLDKCLFARRPASPLTWKERMNIAVGTARGLQYLHTFSDKPFIHGDIKPGNILLN--EFK---QPRIGDFGLTR 360          
BLAST of mRNA_P-littoralis_Contig64.138.1 vs. uniprot
Match: A0A182IPR1_9DIPT (TOLL pathway signalling Ser/Thr kinase n=1 Tax=Anopheles atroparvus TaxID=41427 RepID=A0A182IPR1_9DIPT)

HSP 1 Score: 69.3 bits (168), Expect = 1.470e-10
Identity = 48/157 (30.57%), Postives = 77/157 (49.04%), Query Frame = 1
Query:   55 EQAFLGRGSFGTVMRGLYCNTPVAVKELLTGKEQMVELRRQALAELLEEISILMEFRHPHIVCMVAFNSTYEHGMTTHIV------MEMYKGNARKLHSLDEVAVVGRDCMRGLAYMHLH-DKCFIHGDIKPENILVNYDSFKNITKAALGDLGLAR 504
            E+  LG+G FGTV RG++ +T +A+K++   K +  E  R  L + + E+  L   RH +IV +  ++   E  +    +        ++        +  E   + R   +GL Y+H   +K FIHGDIKP NIL+N        +  +GD GL R
Sbjct:  216 ERNILGKGGFGTVYRGVFKHTYMAIKKIDYNKVKTSEAERVQLQQSINELRFLNACRHDNIVPLYGYSIEKEPCLVYQFMPGGSLDKSLFARRPASPLTWKERMNIARGTAKGLQYLHTFCEKPFIHGDIKPGNILLN-----EYKQPRIGDFGLTR 367          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig64.138.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Q8QNJ1_ESV1K6.850e-8468.54EsV-1-82 n=1 Tax=Ectocarpus siliculosus virus 1 (i... [more]
D8LPB3_ECTSI2.710e-8068.79EsV-1-82 [Ectocarpus siliculosus virus 1] n=1 Tax=... [more]
A0A0S4IR96_BODSA9.200e-1335.33Protein kinase, putative n=1 Tax=Bodo saltans TaxI... [more]
UPI000625179F2.750e-1236.71serine/threonine-protein kinase pelle-like isoform... [more]
UPI0007384A2A1.280e-1134.78serine/threonine-protein kinase pelle isoform X1 n... [more]
A0A499U4D3_PLAST3.430e-1132.90Serine/threonine-protein kinase pelle n=1 Tax=Plau... [more]
A0A834KS43_VESGE4.350e-1133.72Protein kinase domain-containing protein n=3 Tax=V... [more]
UPI001F5EB2EE4.910e-1131.21LOW QUALITY PROTEIN: interleukin-1 receptor-associ... [more]
A0A182QDR7_9DIPT1.080e-1033.52Protein kinase domain-containing protein n=1 Tax=A... [more]
A0A182IPR1_9DIPT1.470e-1030.57TOLL pathway signalling Ser/Thr kinase n=1 Tax=Ano... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig64contigP-littoralis_Contig64:555393..556220 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog3055.EDP09284
PFAMsPkinase,Pkinase_Tyr
Model size540
Max annot lvl2759|Eukaryota
KEGG koko:K04419,ko:K04424,ko:K04427,ko:K17535
KEGG Pathwayko04010,ko04013,ko04064,ko04140,ko04152,ko04214,ko04310,ko04380,ko04520,ko04620,ko04621,ko04622,ko04624,ko04657,ko04660,ko04668,ko04932,ko05140,ko05145,ko05162,ko05168,ko05169,ko05418,map04010,map04013,map04064,map04140,map04152,map04214,map04310,map04380,map04520,map04620,map04621,map04622,map04624,map04657,map04660,map04668,map04932,map05140,map05145,map05162,map05168,map05169,map05418
KEGG ModuleM00686,M00688,M00689
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004672,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019538,GO:0023052,GO:0035556,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0071704,GO:0140096,GO:1901564
Exons2
Evalue5.02e-13
EggNOG OGsCOG0515@1|root,KOG0192@2759|Eukaryota,37ZR4@33090|Viridiplantae,34KJH@3041|Chlorophyta
EC2.7.11.1,2.7.11.25
DescriptionBelongs to the protein kinase superfamily
Cds size540
COG categoryT
BRITEko00000,ko00001,ko00002,ko01000,ko01001
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791336.2251198-CDS-P-littoralis_Contig64:555392..5556641680791336.2251198-CDS-P-littoralis_Contig64:555392..555664Pylaiella littoralis U1_48CDSP-littoralis_Contig64 555393..555664 -
1680791336.2425585-CDS-P-littoralis_Contig64:555952..5562201680791336.2425585-CDS-P-littoralis_Contig64:555952..556220Pylaiella littoralis U1_48CDSP-littoralis_Contig64 555953..556220 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig64.138.1prot_P-littoralis_Contig64.138.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig64 555393..556220 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig64.138.1

>prot_P-littoralis_Contig64.138.1 ID=prot_P-littoralis_Contig64.138.1|Name=mRNA_P-littoralis_Contig64.138.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=180bp
MKTKTSINIEELKQWPFPEQAFLGRGSFGTVMRGLYCNTPVAVKELLTGK
EQMVELRRQALAELLEEISILMEFRHPHIVCMVAFNSTYEHGMTTHIVME
MYKGNARKLHSLDEVAVVGRDCMRGLAYMHLHDKCFIHGDIKPENILVNY
DSFKNITKAALGDLGLARSCVQCLTKKEFR
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mRNA from alignment at P-littoralis_Contig64:555393..556220-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig64.138.1 ID=mRNA_P-littoralis_Contig64.138.1|Name=mRNA_P-littoralis_Contig64.138.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=828bp|location=Sequence derived from alignment at P-littoralis_Contig64:555393..556220- (Pylaiella littoralis U1_48)
ATGAAAACCAAAACGTCGATCAACATCGAAGAGTTGAAGCAATGGCCTTT TCCCGAACAAGCGTTTTTGGGTCGAGGATCGTTCGGTACGGTTATGAGAG GTCTTTATTGTAACACACCCGTCGCCGTGAAAGAACTTCTAACAGGTAAA GAGCAGATGGTCGAGCTTCGCCGGCAAGCCCTGGCAGAGCTGCTTGAAGA AATTTCCATTTTGATGGAATTCCGCCATCCTCACATCGTGTGTATGGTCG CGTTCAACTCAACATATGGTCGCCCCGGTGGACTAGTGGTCCCTCGTTAA CCACTAGATGCAGAGGAACGGGGGTTCGATTCCCGGTGAATGTGTTCCTT TGCTACTTTGAAAGCGGCTATGCTGTTAGTAAAATCAGATTCGGCTTCGC CGACGAGGGTAGGGACCGCGGACCCCTGCTCGCGAGAAAAAATCTCACGC ATGTACCGCAGAAGGAAGGTGGGGGTAACTCCTCCTGTGTTGACCTTCCT CCTGTGTGACCCCGTCGATGGGCCTAGCCTGTAGTTTGCAGACTAGTGTG CCAGAGAACATGGGATGACAACACATATAGTCATGGAAATGTACAAAGGA AACGCCAGAAAACTTCATTCTCTCGACGAGGTGGCCGTAGTTGGAAGAGA CTGTATGAGAGGTCTCGCGTATATGCACCTTCACGATAAATGTTTCATCC ACGGTGACATCAAACCCGAAAATATTTTAGTAAACTACGATTCTTTCAAA AACATCACGAAGGCCGCTCTCGGTGACTTAGGTTTGGCACGTTCGTGTGT GCAATGTTTGACAAAGAAAGAATTTCGG
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Coding sequence (CDS) from alignment at P-littoralis_Contig64:555393..556220-

>mRNA_P-littoralis_Contig64.138.1 ID=mRNA_P-littoralis_Contig64.138.1|Name=mRNA_P-littoralis_Contig64.138.1|organism=Pylaiella littoralis U1_48|type=CDS|length=540bp|location=Sequence derived from alignment at P-littoralis_Contig64:555393..556220- (Pylaiella littoralis U1_48)
ATGAAAACCAAAACGTCGATCAACATCGAAGAGTTGAAGCAATGGCCTTT
TCCCGAACAAGCGTTTTTGGGTCGAGGATCGTTCGGTACGGTTATGAGAG
GTCTTTATTGTAACACACCCGTCGCCGTGAAAGAACTTCTAACAGGTAAA
GAGCAGATGGTCGAGCTTCGCCGGCAAGCCCTGGCAGAGCTGCTTGAAGA
AATTTCCATTTTGATGGAATTCCGCCATCCTCACATCGTGTGTATGGTCG
CGTTCAACTCAACATATGAACATGGGATGACAACACATATAGTCATGGAA
ATGTACAAAGGAAACGCCAGAAAACTTCATTCTCTCGACGAGGTGGCCGT
AGTTGGAAGAGACTGTATGAGAGGTCTCGCGTATATGCACCTTCACGATA
AATGTTTCATCCACGGTGACATCAAACCCGAAAATATTTTAGTAAACTAC
GATTCTTTCAAAAACATCACGAAGGCCGCTCTCGGTGACTTAGGTTTGGC
ACGTTCGTGTGTGCAATGTTTGACAAAGAAAGAATTTCGG
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