prot_P-littoralis_Contig64.3.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig64.3.1
Unique Nameprot_P-littoralis_Contig64.3.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length131
Homology
BLAST of mRNA_P-littoralis_Contig64.3.1 vs. uniprot
Match: A0A6H5JUW6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUW6_9PHAE)

HSP 1 Score: 214 bits (546), Expect = 1.010e-68
Identity = 100/129 (77.52%), Postives = 114/129 (88.37%), Query Frame = 0
Query:    2 CGGERVSWFSRTKKCVTLSTTEAEYVALAEVTKEVLFLRQVWRFMLPEVGMPCIPVFEDNEGAIQLAKNPITNSNSKHIDVRHHFRRELVARGKLSITHVPSQFQHTDFLTKSLPVETFEFHRKFVMSL 130
            CGG  VSWFSRT+KCVTLSTTEAEYVAL +V KE+LFLRQ+WRFMLP+VGMPCIPVFEDN+GAIQLA+NPI+NSNSKHIDVRHHF RELV R ++S+ HVPS +Q  DFLTKSLP + FE HR FVM+L
Sbjct:   82 CGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLPKDAFESHRDFVMNL 210          
BLAST of mRNA_P-littoralis_Contig64.3.1 vs. uniprot
Match: A0A6H5KIJ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIJ7_9PHAE)

HSP 1 Score: 211 bits (538), Expect = 2.780e-67
Identity = 97/129 (75.19%), Postives = 115/129 (89.15%), Query Frame = 0
Query:    2 CGGERVSWFSRTKKCVTLSTTEAEYVALAEVTKEVLFLRQVWRFMLPEVGMPCIPVFEDNEGAIQLAKNPITNSNSKHIDVRHHFRRELVARGKLSITHVPSQFQHTDFLTKSLPVETFEFHRKFVMSL 130
            CGG  VSWFSRT+KCVTLSTTEAEYVAL +V KE++FLRQ+WRFMLP+VGMPCIP+FEDN+GAIQLA+NPI+NSNSKHIDVRHHF RELV R ++S+ HVPS +Q  DFLTKSL  ++FE HR+FVM+L
Sbjct:   98 CGGGSVSWFSRTQKCVTLSTTEAEYVALGDVVKEIIFLRQIWRFMLPQVGMPCIPIFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLSKDSFESHREFVMNL 226          
BLAST of mRNA_P-littoralis_Contig64.3.1 vs. uniprot
Match: A0A6H5JWJ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWJ4_9PHAE)

HSP 1 Score: 211 bits (538), Expect = 6.900e-67
Identity = 99/129 (76.74%), Postives = 113/129 (87.60%), Query Frame = 0
Query:    2 CGGERVSWFSRTKKCVTLSTTEAEYVALAEVTKEVLFLRQVWRFMLPEVGMPCIPVFEDNEGAIQLAKNPITNSNSKHIDVRHHFRRELVARGKLSITHVPSQFQHTDFLTKSLPVETFEFHRKFVMSL 130
            CGG  VSWFSRT+KCVTLSTTEAEYVAL +V KE+LFLRQ+WRFMLP+VGMPCIPVFEDN+GAIQLA+NPI+NSNSKHIDVRHHF RELV R ++S+ HVPS +Q  DFLTKSL  + FE HR FVM+L
Sbjct:  127 CGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLSKDAFESHRDFVMNL 255          
BLAST of mRNA_P-littoralis_Contig64.3.1 vs. uniprot
Match: A0A6H5KEZ8_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEZ8_9PHAE)

HSP 1 Score: 210 bits (534), Expect = 7.940e-67
Identity = 99/129 (76.74%), Postives = 112/129 (86.82%), Query Frame = 0
Query:    2 CGGERVSWFSRTKKCVTLSTTEAEYVALAEVTKEVLFLRQVWRFMLPEVGMPCIPVFEDNEGAIQLAKNPITNSNSKHIDVRHHFRRELVARGKLSITHVPSQFQHTDFLTKSLPVETFEFHRKFVMSL 130
            CGG  VSWFSRT+KCVTLSTTEAEYVAL EV K +LFLRQ+WRFMLP+VGMPCIPVFEDN+GAIQLA+NPI+NSNSKHIDVRHHF RELV R ++S+ HVPS +Q  DFLTKSL  + FE HR FVM+L
Sbjct:   87 CGGGAVSWFSRTQKCVTLSTTEAEYVALGEVVKVILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLSKDAFESHRDFVMNL 215          
BLAST of mRNA_P-littoralis_Contig64.3.1 vs. uniprot
Match: A0A6H5KP70_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP70_9PHAE)

HSP 1 Score: 212 bits (539), Expect = 3.420e-66
Identity = 100/130 (76.92%), Postives = 115/130 (88.46%), Query Frame = 0
Query:    1 MCGGERVSWFSRTKKCVTLSTTEAEYVALAEVTKEVLFLRQVWRFMLPEVGMPCIPVFEDNEGAIQLAKNPITNSNSKHIDVRHHFRRELVARGKLSITHVPSQFQHTDFLTKSLPVETFEFHRKFVMSL 130
            MCGG  V+WFSRT+KCVTLSTTEAEYVA+A+V KEVLFLRQVWRFMLP+ GMPCIPVFEDN+GAIQ+A NPITNSNSKHIDVRHHF RELV R ++SIT+VP+ FQH DFLTK++  E+F  HR FVM+L
Sbjct:  191 MCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITNVPTPFQHADFLTKAISKESFALHRDFVMNL 320          
BLAST of mRNA_P-littoralis_Contig64.3.1 vs. uniprot
Match: A0A6H5L4G9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4G9_9PHAE)

HSP 1 Score: 213 bits (541), Expect = 7.980e-66
Identity = 100/130 (76.92%), Postives = 114/130 (87.69%), Query Frame = 0
Query:    1 MCGGERVSWFSRTKKCVTLSTTEAEYVALAEVTKEVLFLRQVWRFMLPEVGMPCIPVFEDNEGAIQLAKNPITNSNSKHIDVRHHFRRELVARGKLSITHVPSQFQHTDFLTKSLPVETFEFHRKFVMSL 130
            MCGG  V+WFSRT+KCVTLSTTEAEYVA+A+V KEVLFLRQVWRFMLP+  MPCIPVFEDN+GAIQ+  NPITNSNSKHIDVRHHF RELV R ++SITHVP+QFQH DFLTK++  E+F  HR FVM+L
Sbjct:  246 MCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDASMPCIPVFEDNQGAIQIMHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTQFQHADFLTKAISKESFALHRDFVMNL 375          
BLAST of mRNA_P-littoralis_Contig64.3.1 vs. uniprot
Match: A0A6H5JFG2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG2_9PHAE)

HSP 1 Score: 214 bits (546), Expect = 1.280e-65
Identity = 100/129 (77.52%), Postives = 114/129 (88.37%), Query Frame = 0
Query:    2 CGGERVSWFSRTKKCVTLSTTEAEYVALAEVTKEVLFLRQVWRFMLPEVGMPCIPVFEDNEGAIQLAKNPITNSNSKHIDVRHHFRRELVARGKLSITHVPSQFQHTDFLTKSLPVETFEFHRKFVMSL 130
            CGG  VSWFSRT+KCVTLSTTEAEYVAL +V KE+LFLRQ+WRFMLP+VGMPCIPVFEDN+GAIQLA+NPI+NSNSKHIDVRHHF RELV R ++S+ HVPS +Q  DFLTKSLP + FE HR FVM+L
Sbjct:  333 CGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLPKDAFESHRDFVMNL 461          
BLAST of mRNA_P-littoralis_Contig64.3.1 vs. uniprot
Match: A0A6H5JTT9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT9_9PHAE)

HSP 1 Score: 205 bits (521), Expect = 1.650e-65
Identity = 98/130 (75.38%), Postives = 111/130 (85.38%), Query Frame = 0
Query:    1 MCGGERVSWFSRTKKCVTLSTTEAEYVALAEVTKEVLFLRQVWRFMLPEVGMPCIPVFEDNEGAIQLAKNPITNSNSKHIDVRHHFRRELVARGKLSITHVPSQFQHTDFLTKSLPVETFEFHRKFVMSL 130
            MCGG  V+WFSRT+KCVTLSTTEAEYVA+A+V KEVLFLRQVWRFMLP+ GMPCIPVFEDN   IQ+A NPITNSNSKHIDVRHHF RELV R ++SITHV S+FQH D LTK++  E+F  HR FVM+L
Sbjct:   39 MCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNNQRIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEFQHVDSLTKAISKESFALHRDFVMNL 168          
BLAST of mRNA_P-littoralis_Contig64.3.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE)

HSP 1 Score: 213 bits (541), Expect = 3.990e-65
Identity = 101/130 (77.69%), Postives = 114/130 (87.69%), Query Frame = 0
Query:    1 MCGGERVSWFSRTKKCVTLSTTEAEYVALAEVTKEVLFLRQVWRFMLPEVGMPCIPVFEDNEGAIQLAKNPITNSNSKHIDVRHHFRRELVARGKLSITHVPSQFQHTDFLTKSLPVETFEFHRKFVMSL 130
            MCGG  +SWFSRT+KCVTLSTTEAEYV+LA+V KEVLFLRQVWRFMLPE GMPCIPVFEDN+GAIQLA+NPI+NSNSKHIDVRHHF RELV R ++SI HV S +QH DFLTK+L    FEFHR +VMS+
Sbjct:  308 MCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKALHAGDFEFHRNYVMSM 437          
BLAST of mRNA_P-littoralis_Contig64.3.1 vs. uniprot
Match: A0A6H5K684_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K684_9PHAE)

HSP 1 Score: 209 bits (532), Expect = 4.020e-65
Identity = 99/128 (77.34%), Postives = 112/128 (87.50%), Query Frame = 0
Query:    1 MCGGERVSWFSRTKKCVTLSTTEAEYVALAEVTKEVLFLRQVWRFMLPEVGMPCIPVFEDNEGAIQLAKNPITNSNSKHIDVRHHFRRELVARGKLSITHVPSQFQHTDFLTKSLPVETFEFHRKFVM 128
            MCGG  V+WFSRT+KCVTLSTTEAEYVA+A+V KEVLFLRQVWRFMLP+ GMPCIPVFEDN+GAIQ+A NPITNSNSKHIDVRHHF RELV R ++SITHV S+FQH DFLTK+   E+F  HR FV+
Sbjct:  181 MCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEFQHADFLTKATSKESFALHRDFVI 308          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig64.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JUW6_9PHAE1.010e-6877.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KIJ7_9PHAE2.780e-6775.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWJ4_9PHAE6.900e-6776.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KEZ8_9PHAE7.940e-6776.74Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KP70_9PHAE3.420e-6676.92Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L4G9_9PHAE7.980e-6676.92Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JFG2_9PHAE1.280e-6577.52Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JTT9_9PHAE1.650e-6575.38Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JLN0_9PHAE3.990e-6577.69Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K684_9PHAE4.020e-6577.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 56..126
NoneNo IPR availablePANTHERPTHR11439:SF343SUBFAMILY NOT NAMEDcoord: 56..126
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 1..116
e-value: 2.61589E-48
score: 149.926

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig64contigP-littoralis_Contig64:18770..19162 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig64.3.1mRNA_P-littoralis_Contig64.3.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig64 18696..19645 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig64.3.1 ID=prot_P-littoralis_Contig64.3.1|Name=mRNA_P-littoralis_Contig64.3.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=131bp
MCGGERVSWFSRTKKCVTLSTTEAEYVALAEVTKEVLFLRQVWRFMLPEV
GMPCIPVFEDNEGAIQLAKNPITNSNSKHIDVRHHFRRELVARGKLSITH
VPSQFQHTDFLTKSLPVETFEFHRKFVMSL*
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