mRNA_P-littoralis_Contig636.4.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig636.4.1
Unique NamemRNA_P-littoralis_Contig636.4.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig636.4.1 vs. uniprot
Match: A0A6H5KRZ8_9PHAE (DDE-1 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ8_9PHAE)

HSP 1 Score: 216 bits (551), Expect = 2.290e-61
Identity = 139/322 (43.17%), Postives = 192/322 (59.63%), Query Frame = 1
Query:   58 REYPPAPFTLRRVSGKSGRNSYENIQKLEVLIYSRLMCS-DGQPVGRRGAGKVFGIDKKKLVRDWEDQEEELIE-FSKQENAGEQRPLHPGREADTKEVEEAIVDEINALRKNGAAVTQDLVLAKLLSEMPKFGGGLPSASEPQKMEQFQKRFNAWYYRFLKRHRFSIRRETSMGQKKPEGWEGKAWAFVQKLRAILREYAQDTVILERAAQAAKVGGTMEIEMDTKATAEELLAVQAKIFALMYNMDQTPIQVELPSETTPEKTGAKSACITTGGKEKLRYTVVLTVRGDGQKVRPRIIYKGSPF----VGGTKKSGAPKK 1005
            R YP   F + R     G+ SY    KL    Y+R +C  DGQPVG  GA  V  +  K+++ +W  QEE+L E  S      + + +H G +A T + E+A+VD +N  RK         V+ KLL   P   GG+ + ++P++   F+ +FN+WY RF KR+ FSIRR TS+GQK P+G+EG AWA V KLR  L + A +  I  R    A     ++ E     T+E+L +V+A++F  + NMDQTP+Q E+P ETT EKTGAK A I+TGG+EK R+T+VL V  DG+KV PRII+KG+PF    V G  KS  P+K
Sbjct:   62 RAYPEPNFPIERSGAVEGKGSYPIRFKLNAATYTRKICPCDGQPVGNNGAAIVLQVPWKRII-EWLKQEEQLREKVSANPKLSKAKQVHSGGKASTVDAEQALVDYMNEQRKQHRDCGNREVMNKLLELKPDALGGMSTNAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVKRAGE--IYARRHPPAPDESPIKGE---DLTSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGEEKERFTLVLAVMADGKKVSPRIIFKGTPFIPPTVSGKVKSTLPRK 377          
BLAST of mRNA_P-littoralis_Contig636.4.1 vs. uniprot
Match: A0A6H5JQM5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM5_9PHAE)

HSP 1 Score: 197 bits (502), Expect = 9.460e-55
Identity = 123/306 (40.20%), Postives = 176/306 (57.52%), Query Frame = 1
Query:   58 REYPPAPFTLRRVSGKSGRNSYENIQKLEVLIYSRLMCSDGQPVGRRGAGKVFGIDKKKLVRDWEDQEEELIEFSKQE-NAGEQRPLHPGREADTKEVEEAIVDEINALRKNGAAVTQDLVLAKLLSEMPKFGGGLPSASEPQKMEQFQKRFNAWYYRFLKRHRFSIRRETSMGQKKPEGWEGKAWAFVQKLRAILREYAQDTVILERAAQAAKVGGTMEIEMDTKATAEELLAVQAKIFALMYNMDQTPIQVELPSETTPEKTGAKSACITTGGKEKLRYTVVLTVRGDGQKVRPRIIYKGSPFV 972
            R+YP + F   R  GK G  SY    KL+ + ++R++C DGQPVG  GA KV  +D+++++  W  +E  +    K++    + + +H G    T EVE+ + D IN  R+         V+ KLL   P   GGL +A+  ++   F+ +F  WY+RF +RH  SIRR TS+GQK P G+EG A+A + KLR  L E A +      A +     G   I+    + A+ L +V  ++F  + NMDQTP+Q E+P ETT EK GAK A I+TGGKEK R+T+ L V  DG KV  RII+KG PF+
Sbjct:   56 RKYPESDFAKERTGGKKG--SYPMRFKLKAVAFTRVLCEDGQPVGNSGAAKVLAVDRRRIIT-WVGEEATMKNLVKEKPKLSKAKSIHAGVAPPTAEVEQDLEDYINEQRREHRGCGSMEVMNKLLELKPDALGGLTAAASAEETLAFRTKFKNWYHRFRERHGLSIRRRTSVGQKLPTGYEGLAFATLMKLRTALLERAGEIY----ARRNPPASGESPIKGKDLSPAQ-LESVATEVFEELGNMDQTPVQQEMPVETTLEKGGAKDARISTGGKEKERFTLCLAVMADGGKVPLRIIFKGKPFI 353          
BLAST of mRNA_P-littoralis_Contig636.4.1 vs. uniprot
Match: A0A6H5JFD9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFD9_9PHAE)

HSP 1 Score: 190 bits (483), Expect = 4.120e-54
Identity = 132/322 (40.99%), Postives = 180/322 (55.90%), Query Frame = 1
Query:   58 REYPPAPFTLRRVSGKSGRNSYENIQKLEVLIYSRLMCS-DGQPVGRRGAGKVFGIDKKKLVRDWEDQEEELIE-FSKQENAGEQRPLHPGREADTKEVEEAIVDEINALRKNGAAVTQDLVLAKLLSEMPKFGGGLPSASEPQKMEQFQKRFNAWYYRFLKRHRFSIRRETSMGQKKPEGWEGKAWAFVQKLRAILREYAQDTVILERAAQAAKVGGTMEIEMDTKATAEELLAVQAKIFALMYNMDQTPIQVELPSETTPEKTGAKSACITTGGKEKLRYTVVLTVRGDGQKVRPRIIYKGSPF----VGGTKKSGAPKK 1005
            R YP   F + R     G+ SY    KL+   Y+R +C  DGQP                 + +W  QEE+L E  S      + + +H G +A T   E+A+VD I   RK         V+ KLL   P   GG+P+ ++P++   F+ +FN+WY RF KR+ FSIRR TS+ QK  +G+EG A A V KLR  L + A +  I  R    A     ++ E     T+E+L +V+A++F  + NMDQTP+Q E+P ETT EKTGAK A I+TGGKEK R+T+VL V  DG+KV PRII+KG+PF    V G  KS  P+K
Sbjct:   62 RAYPEPNFPIERSGAVGGKGSYPIRFKLKAAAYTREICPCDGQP----------------RIIEWLKQEEQLKEKVSANPKFSKAKQVHSGGKASTVHAEQALVDYIKEQRKQHRGCGNREVMNKLLELKPDALGGMPANAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRTSVRQKLQKGYEGMASATVMKLREALVKRAGE--IYARRHPPAPDESPIKGE---DLTSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPFIPPTVSGKGKSTLPRK 362          
BLAST of mRNA_P-littoralis_Contig636.4.1 vs. uniprot
Match: A0A6H5K8Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y4_9PHAE)

HSP 1 Score: 192 bits (487), Expect = 5.530e-51
Identity = 121/314 (38.54%), Postives = 176/314 (56.05%), Query Frame = 1
Query:   31 AKKRKGPAPREYPPAPFTLRRVSGKSGRNSYENIQKLEVLIYSRLMCSDGQPVGRRGAGKVFGIDKKKLVRDWEDQEEELIEFSKQENAGEQRPLHPGREADTKEVEEAIVDEINALRKNGAAVTQDLVLAKLLSEMPKFGGGLPSASEPQKMEQFQKRFNAWYYRFLKRHRFSIRRETSMGQKKPEGWEGKAWAFVQKLRAILREYAQDTVILERAAQAAKVGGTMEIEMDTKATAEELLAVQAKIFALMYNMDQTPIQVELPSETTPEKTGAKSACITTGGKEKLRYTVVLTVRGDGQKVRPRIIYKGSPFV 972
            A K  G   R+YP   F          +  Y    KL+V+ ++R++C DG+P G  GA KV  + ++++V    D+E    + S      + + +H   +A   ++EEA+V+ IN  RK+         + KLL   P   GGL +  +P++      +F +WY RF KR++FSIRR TS+GQK P+G EG AWA + KLR  L E A + +  +R   A    G   I  +  ++++ L  V  ++F  + NMDQTP+Q E+P ETT E TGAK A I TGGKEK R+T+ L V  DG+KV  RII+KG+PFV
Sbjct:   26 AAKDPGSKKRKYPEPGFPSETSGAVGKKRGYPVGFKLKVVAFTRVVCEDGKPGGNSGAAKVLDVPRRRIVEWVRDEESLRAKVSANPKLSKAKQIHARGKASRADIEEALVEFINDQRKHHVGCGSMAAMNKLLELKPDALGGLAAKPKPEEALALNSKFKSWYQRFCKRNKFSIRRRTSVGQKLPKGHEGMAWATLMKLRKALLERAGE-IYAQRYPPAP---GESPIRGEDLSSSQ-LELVTDELFEELGNMDQTPVQHEMPVETTLENTGAKDARIATGGKEKERFTLCLAVSADGKKVPLRIIFKGTPFV 334          
BLAST of mRNA_P-littoralis_Contig636.4.1 vs. uniprot
Match: A0A6H5KJN9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJN9_9PHAE)

HSP 1 Score: 175 bits (444), Expect = 3.320e-47
Identity = 113/269 (42.01%), Postives = 157/269 (58.36%), Query Frame = 1
Query:   79 FTLRRVSGKSGRNSYENIQKLEVLIYSRLMCS-DGQPVGRRGAGKVFGIDKKKLVRDWEDQEEELIE-FSKQENAGEQRPLHPGREADTKEVEEAIVDEINALRKNGAAVTQDLVLAKLLSEMPKFGGGLPSASEPQKMEQFQKRFNAWYYRFLKRHRFSIRRETSMGQKKPEGWEGKAWAFVQKLRAILREYAQDTVILERAAQAAKVGGTMEIEMDTKATAEELLAVQAKIFALMYNMDQTPIQVELPSETTPEKTGAKSACITTGG 879
            F + R     G+ SY    KL    Y+R +C  DGQPVG  GA KV  + +K+++ +W  QEE+L E  S      + + +H G +A T + E+ +VD IN  RK         V+ KLL   P   GG+P+ ++P++   F+  FN WY RF KR+ FSIRR TS+GQK P+G+EG AWA V KLR  L + A +  I  R    A     ++ E     T+E+L +V+A++F  + NMDQTP+Q E+P ETT EKTGAK A I+TGG
Sbjct:   10 FPIERSGAVGGKGSYPIRFKLNAAAYTREICPCDGQPVGNNGAAKVLQVPRKRII-EWLKQEEQLREKVSANPKLSKAKQVHSGGKASTVDAEQVLVDYINEQRKQHRGCGNREVMNKLLELKPDALGGMPANAKPEEALAFKVNFNPWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVKRAGE--IYARRHPPAPDESPIKGE---DLTSEQLASVKAEVFEELGNMDQTPVQHEMPVETTLEKTGAKDARISTGG 272          
BLAST of mRNA_P-littoralis_Contig636.4.1 vs. uniprot
Match: A0A6H5L819_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L819_9PHAE)

HSP 1 Score: 171 bits (432), Expect = 2.500e-46
Identity = 115/283 (40.64%), Postives = 167/283 (59.01%), Query Frame = 1
Query:  184 PVGRRGAGKV----FGIDKKKLVRDWEDQEEELIE-FSKQENAGEQRPLHPGREADTKEVEEAIVDEINALRKNGAAVTQDLVLAKLLSEMPKFGGGLPSASEPQKMEQFQKRFNAWYYRFLKRHRFSIRRETSMGQKKPEGWEGKAWAFVQKLRAILREYAQDTVILERAAQAAKVGGTMEIEMDTKATAEELLAVQAKIFALMYNMDQTPIQVELPSETTPEKTGAKSACITTGGKEKLRYTVVLTVRGDGQKVRPRIIYKGSPF----VGGTKKSGAPKK 1005
            P+ R G+G+       + +K+++ +W  QEE+L E  S      + + +H G +A   + E+A+VD IN   K         V+ KLL   P   GG+P+ ++P++   F+ +FN+WY RF KR+ F IRR TS+GQK P+G+EG AWA V KLR  L + A +  I  R    A     ++ E     T+E+L +V+A++F  +  M QTP+Q E+P   T EKTGAK A I+TGGKEK R+T+VL V  DG+KV PR I+KG+PF    + G  KS  P+K
Sbjct:   70 PIERSGSGRERELPHPVPRKRII-EWLKQEEQLREKVSANPKLSKAKQVHSGGKASIVDAEQALVDYINERHKQHRGCGNREVMNKLLELKPDALGGVPANAKPEEALAFKVKFNSWYQRFRKRNGFRIRRRTSVGQKLPKGYEGMAWATVMKLREALVKRAGE--IYARRHPPAHDESPIKGE---DLTSEQLASVEAEVFEEVGIMGQTPVQHEVPVAITLEKTGAKDARISTGGKEKERFTLVLAVMADGKKVSPRNIFKGTPFFPPTMSGKGKSTLPRK 346          
BLAST of mRNA_P-littoralis_Contig636.4.1 vs. uniprot
Match: A0A6H5JTG5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTG5_9PHAE)

HSP 1 Score: 173 bits (438), Expect = 1.800e-45
Identity = 116/278 (41.73%), Postives = 164/278 (58.99%), Query Frame = 1
Query:  187 VGRRGAGKVFGIDKKKLVRDWEDQEEELIE-FSKQENAGEQRPLHPGREADTKEVEEAIVDEINALRKNGAAVTQDLVLAKLLSEMPKFGGGLPSASEPQKMEQFQKRFNAWYYRFLKRHRFSIRRETSMGQKKPEGWEGKAWAFVQKLRAILREYAQDTVILERAAQAAKVGGTMEIEMDTKATAEELLAVQAKIFALMYNMDQTPIQVELPSETTPEKTGAKSACITTGGKEKLRYTVVLTVRGDGQKVRPRIIYKGSPF----VGGTKKSGAPKK 1005
            VG +G+  +     +K + +W  QE +L E  S      + + +H G +A T + E+A+VD IN  RK         V+ KLL   P   GG+P+ ++P++   F+ +FN+WY RF KR+ FSIRR  S+GQK P+G+EG AWA V KLR  L + A +  I  R    A     ++ E     T+E+  +V+A++F  + NMDQTP+Q E+P ETT E TG K A I+TGGKEK R+T+VL V  DG+ V P II+KG+PF    V G  KS  P+K
Sbjct:   77 VGGKGSYPIRLQVPRKRIIEWLKQEGQLREKVSANPKLSKAKQVHSGGKASTVDAEQALVDYINEQRKLHRGCGNREVMNKLLELKPDALGGMPANAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRASVGQKLPKGYEGMAWATVTKLREALVKRAGE--IYARRHPPAPDESPIKGE---DLTSEQPASVEAEVFEELGNMDQTPVQHEMPVETTLEDTGGKDARISTGGKEKERFTLVLAVMADGKMVSPCIIFKGTPFIPPTVSGKGKSTLPRK 349          
BLAST of mRNA_P-littoralis_Contig636.4.1 vs. uniprot
Match: A0A6H5KFQ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFQ9_9PHAE)

HSP 1 Score: 166 bits (419), Expect = 6.260e-45
Identity = 112/276 (40.58%), Postives = 158/276 (57.25%), Query Frame = 1
Query:   58 REYPPAPFTLRRVSGKSGRNSYENIQKLEVLIYSRLMCS-DGQPVGRRGAGKVFGIDKKKLVRDWEDQEEELIE-FSKQENAGEQRPLHPGREADTKEV-EEAIVDEINALRKNGAAVTQDLVLAKLLSEMPKFGGGLPSASEPQKMEQFQKRFNAWYYRFLKRHRFSIRRETSMGQKKPEGWEGKAWAFVQKLRAILREYAQDTVILERAAQAAKVGGTMEIEMDTKATAEELLAVQAKIFALMYNMDQTPIQVELPSETTPEKTGAKSACITTG 876
            R YP   F + R     G+ SY    KL+   Y+R +C  DGQPVG  G  KV  + +K+++ +W  QEE+L E  S      + + +  G +A T +  E+A+VD IN  RK         V+ KLL   P   GG+P+ ++P++   F+ +FN+WY +F KR+ FSIRR TS+GQK P+G+EG AWA V  LR  L + A    I  R    A     ++ E     T E+L +V+A++F  + NMDQTP+Q E+P ETT EKTGAK A I+TG
Sbjct:   65 RAYPEPNFPIERSGAVGGKGSYPIRFKLKAAAYTREICPCDGQPVGNNGGAKVLQVPRKRII-EWLKQEEQLREKVSANPKLSKAKQVPSGGKASTVDAAEQALVDYINEQRKQHRGCGNREVINKLLQLKPDALGGMPANAKPEEALAFKIKFNSWYQQFRKRNGFSIRRRTSVGQKLPKGYEGTAWATVMNLREALVQRAG--AIHARRNPPAPDESPIKGE---DLTCEQLASVEAEVFEELGNMDQTPVQHEMPVETTLEKTGAKDARISTG 334          
BLAST of mRNA_P-littoralis_Contig636.4.1 vs. uniprot
Match: A0A6H5JHT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT8_9PHAE)

HSP 1 Score: 169 bits (428), Expect = 9.620e-44
Identity = 113/284 (39.79%), Postives = 167/284 (58.80%), Query Frame = 1
Query:  175 DGQPVGRRGAGKVFGIDKKKLVRDWEDQEEELIE-FSKQENAGEQRPLHPGREADTKEVEEAIVDEINALRKNGAA-VTQDLVLAKLLSEMPKFGGGLPSASEPQKMEQFQKRFNAWYYRFLKRHRFSIRRETSMGQKKPEGWEGKAWAFVQKLRAILREYAQDTVILERAAQAAKVGGTMEIEMDTKATAEELLAVQAKIFALMYNMDQTPIQVELPSETTPEKTGAKSACITTGG-KEKLRYTVVLTVRGDGQKVRPRIIYKGSPF----VGGTKKSGAPKK 1005
            DGQPVG  GA KV  + +K+++ +W   E +L E  S      + + +H G +  T + E+     ++      A  +    V+ KLL   P   GG+P+ ++P++   F+ +FN+WY RF KR+ FSIRR TS+GQK P+G+EG AWA V KL   L + A + +   R   A         ++++    E+L +V+A++F  + NMDQ P+Q E+P ETT +KTGAK A I+TGG  EK R+T+VL V  DG+KV PRII++G+PF    V G  KS  P+K
Sbjct:  113 DGQPVGNNGAAKVLQVPRKRII-EWLKPEAQLREKVSANPKLSKAKQVHSGGKVSTVDAEQPFPCGLHQRATQAAPRLGNREVMNKLLELKPDALGGMPANAKPEEAIDFKFKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLCEALVKRAGE-IYARRHPPAPDESPIKGEDLNS----EQLASVEAEVFEEVGNMDQMPVQHEMPVETTLDKTGAKDARISTGGGNEKERFTLVLAVTADGKKVSPRIIFEGTPFIPPTVSGKGKSTRPRK 390          
BLAST of mRNA_P-littoralis_Contig636.4.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE)

HSP 1 Score: 164 bits (415), Expect = 3.790e-43
Identity = 99/198 (50.00%), Postives = 131/198 (66.16%), Query Frame = 1
Query:  424 KLLSEMPKFGGGLPSASEPQKMEQFQKRFNAWYYRFLKRHRFSIRRETSMGQKKPEGWEGKAWAFVQKLRAILREYAQDTVILERAAQAAKVGGTMEIEMDTKATAEELLAVQAKIFALMYNMDQTPIQVELPSETTPEKTGAKSACITTGGKEKLRYTVVLTVRGDGQKVRPRIIYKGSPF----VGGTKKSGAPKK 1005
            KLL   P   GG+P+ ++P++   F+ +FN+WY RF KR+ FSIRR TS+GQK P+G EG AWA V KLR  L + A +  I  R    A     ++ E     T+E+L +V+A++F  + NMDQTP+Q E+P ETT EKTGAK A I+TGGKEK R+T+VL V  DG+KV PRII+KG+PF    V G  KS  P+K
Sbjct:    3 KLLELKPDALGGMPANAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGDEGMAWATVMKLREALVKRAGE--IYARRHPPAPDESPIKGE---DLTSEQLASVEAEVFEELGNMDQTPVQHEIPVETTLEKTGAKDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPFTPPTVSGKGKSTLPRK 195          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig636.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KRZ8_9PHAE2.290e-6143.17DDE-1 domain-containing protein n=3 Tax=Ectocarpus... [more]
A0A6H5JQM5_9PHAE9.460e-5540.20DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JFD9_9PHAE4.120e-5440.99Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8Y4_9PHAE5.530e-5138.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJN9_9PHAE3.320e-4742.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L819_9PHAE2.500e-4640.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTG5_9PHAE1.800e-4541.73DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KFQ9_9PHAE6.260e-4540.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHT8_9PHAE9.620e-4439.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K6L9_9PHAE3.790e-4350.00DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig636contigP-littoralis_Contig636:12278..13847 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FXD3
Preferred namePOGK
PFAMsBrkDBD,DDE_1,HTH_Tnp_Tc5,KRAB
Model size1012
Max annot lvl2759|Eukaryota
KEGG koko:K09228
Hectar predicted targeting categoryother localisation
Exons2
Evalue3.74e-19
EggNOG OGsKOG3105@1|root,KOG3105@2759|Eukaryota
DescriptionDNA binding
Cds size1008
COG categoryCH
BRITEko00000,ko03000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791325.7287495-CDS-P-littoralis_Contig636:12279..124101680791325.7287495-CDS-P-littoralis_Contig636:12279..12410Pylaiella littoralis U1_48CDSP-littoralis_Contig636 12280..12410 -
1680791325.7447548-CDS-P-littoralis_Contig636:12970..138471680791325.7447548-CDS-P-littoralis_Contig636:12970..13847Pylaiella littoralis U1_48CDSP-littoralis_Contig636 12971..13847 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig636.4.1prot_P-littoralis_Contig636.4.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig636 12280..13847 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig636.4.1

>prot_P-littoralis_Contig636.4.1 ID=prot_P-littoralis_Contig636.4.1|Name=mRNA_P-littoralis_Contig636.4.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=336bp
WGSLPRPSASAKKRKGPAPREYPPAPFTLRRVSGKSGRNSYENIQKLEVL
IYSRLMCSDGQPVGRRGAGKVFGIDKKKLVRDWEDQEEELIEFSKQENAG
EQRPLHPGREADTKEVEEAIVDEINALRKNGAAVTQDLVLAKLLSEMPKF
GGGLPSASEPQKMEQFQKRFNAWYYRFLKRHRFSIRRETSMGQKKPEGWE
GKAWAFVQKLRAILREYAQDTVILERAAQAAKVGGTMEIEMDTKATAEEL
LAVQAKIFALMYNMDQTPIQVELPSETTPEKTGAKSACITTGGKEKLRYT
VVLTVRGDGQKVRPRIIYKGSPFVGGTKKSGAPKKP
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mRNA from alignment at P-littoralis_Contig636:12278..13847-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig636.4.1 ID=mRNA_P-littoralis_Contig636.4.1|Name=mRNA_P-littoralis_Contig636.4.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1570bp|location=Sequence derived from alignment at P-littoralis_Contig636:12278..13847- (Pylaiella littoralis U1_48)
TGGGGGAGTTTGCCTCGTCCGTCCGCGTCAGCGAAGAAGAGGAAGGGTCC GGCTCCCAGAGAGTACCCGCCGGCTCCGTTCACGCTCCGGCGAGTGTCTG GGAAGAGCGGGCGCAACTCCTACGAGAACATTCAGAAGCTCGAGGTGCTG ATATACAGCCGGCTCATGTGCAGCGATGGGCAGCCAGTCGGAAGGCGTGG TGCGGGGAAGGTGTTCGGCATCGACAAGAAGAAGCTCGTGAGGGACTGGG AGGACCAGGAGGAGGAGCTGATCGAGTTTTCGAAGCAGGAGAACGCAGGC GAGCAGCGGCCGCTGCACCCCGGACGCGAGGCTGACACGAAGGAGGTGGA GGAGGCCATAGTGGACGAGATCAACGCCCTCAGGAAGAACGGTGCTGCGG TGACCCAGGACCTCGTCCTGGCCAAGCTTCTCTCCGAGATGCCCAAGTTC GGAGGCGGTCTGCCGTCCGCAAGCGAGCCGCAGAAGATGGAACAATTTCA GAAGCGTTTCAACGCCTGGTACTACAGGTTCCTCAAGAGGCACCGGTTCT CGATCCGACGCGAGACGAGCATGGGGCAGAAGAAGCCGGAAGGATGGGAG GGCAAGGCCTGGGCATTCGTCCAGAAGCTCCGGGCAATCCTGCGTGAGTA CGCGCAGGACACTGTCATCTTGGAGAGGGCAGCCCAGGCAGCGAAGGTCG GAGGGACCATGGAGATCGAGATGGACACCAAGGCGACCGCGGAGGAACTT CTGGCTGTTCAGGCCAAGATCTTCGCCCTGATGTACAACATGGACCAGAC ACCGATCCAGGTCGAGCTGCCGTCGGAAACCACGCCGGAGAAGACTGGTG CGAAGAGCGCTTGCATCACGACGGGAGGTGAGGCGGTATGATGGTACAGT AGTTGCATTGTTTAAATCAGGTCCAACCCAACACGGTGCGGAGATTCTAT GCACGCGCAACACAAGCGGGAAATTACAAAATTGCCGACAGCGGAAATAC GGGGAAAAAGAATATTTTTGAATATTTTGCATTGCTTCTGCCGTCACGTG CACATGCTTCTTTTGCCTGCAAGGTACTGCTGTCACCGCCCTACTTCACG TTTGTTGTATTTATCAGCGGTTAAGTGATTCATTTAGTTGTATGTTACAT TGCCCTGTATTCCTGTTCGCTGTGGGCAGGTACCTGGTAAGTTTTGTACT CCAGGAGAAGGTGTGTTTTTTTATTGACTAAATTTATGAAGAAAAGCAGG GAACTCATTTTATTACTTATGTTATCGTACCTAGGTATATACGGTAGTTT ACCTACGGTAGTGGCAGGCAATAATGTTTTGCAGCCAATATAAATTAAAT GGTATTATTGTTGTTATTTCCCTAAGTTGTACTATTATTCACGCGGAAAT ACTTTTTGTTTGAATACACACCGATTTCCGCACCCAGGCAAGGAGAAGCT GCGGTACACCGTTGTGCTAACTGTCCGGGGTGATGGACAGAAGGTGCGGC CGCGCATCATCTACAAGGGGAGCCCTTTCGTCGGGGGTACCAAGAAGTCG GGCGCGCCCAAGAAGCCTGG
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Coding sequence (CDS) from alignment at P-littoralis_Contig636:12278..13847-

>mRNA_P-littoralis_Contig636.4.1 ID=mRNA_P-littoralis_Contig636.4.1|Name=mRNA_P-littoralis_Contig636.4.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1008bp|location=Sequence derived from alignment at P-littoralis_Contig636:12278..13847- (Pylaiella littoralis U1_48)
TGGGGGAGTTTGCCTCGTCCGTCCGCGTCAGCGAAGAAGAGGAAGGGTCC
GGCTCCCAGAGAGTACCCGCCGGCTCCGTTCACGCTCCGGCGAGTGTCTG
GGAAGAGCGGGCGCAACTCCTACGAGAACATTCAGAAGCTCGAGGTGCTG
ATATACAGCCGGCTCATGTGCAGCGATGGGCAGCCAGTCGGAAGGCGTGG
TGCGGGGAAGGTGTTCGGCATCGACAAGAAGAAGCTCGTGAGGGACTGGG
AGGACCAGGAGGAGGAGCTGATCGAGTTTTCGAAGCAGGAGAACGCAGGC
GAGCAGCGGCCGCTGCACCCCGGACGCGAGGCTGACACGAAGGAGGTGGA
GGAGGCCATAGTGGACGAGATCAACGCCCTCAGGAAGAACGGTGCTGCGG
TGACCCAGGACCTCGTCCTGGCCAAGCTTCTCTCCGAGATGCCCAAGTTC
GGAGGCGGTCTGCCGTCCGCAAGCGAGCCGCAGAAGATGGAACAATTTCA
GAAGCGTTTCAACGCCTGGTACTACAGGTTCCTCAAGAGGCACCGGTTCT
CGATCCGACGCGAGACGAGCATGGGGCAGAAGAAGCCGGAAGGATGGGAG
GGCAAGGCCTGGGCATTCGTCCAGAAGCTCCGGGCAATCCTGCGTGAGTA
CGCGCAGGACACTGTCATCTTGGAGAGGGCAGCCCAGGCAGCGAAGGTCG
GAGGGACCATGGAGATCGAGATGGACACCAAGGCGACCGCGGAGGAACTT
CTGGCTGTTCAGGCCAAGATCTTCGCCCTGATGTACAACATGGACCAGAC
ACCGATCCAGGTCGAGCTGCCGTCGGAAACCACGCCGGAGAAGACTGGTG
CGAAGAGCGCTTGCATCACGACGGGAGGCAAGGAGAAGCTGCGGTACACC
GTTGTGCTAACTGTCCGGGGTGATGGACAGAAGGTGCGGCCGCGCATCAT
CTACAAGGGGAGCCCTTTCGTCGGGGGTACCAAGAAGTCGGGCGCGCCCA
AGAAGCCT
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