mRNA_P-littoralis_Contig636.4.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig636.4.1 vs. uniprot
Match: A0A6H5KRZ8_9PHAE (DDE-1 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ8_9PHAE) HSP 1 Score: 216 bits (551), Expect = 2.290e-61 Identity = 139/322 (43.17%), Postives = 192/322 (59.63%), Query Frame = 1
Query: 58 REYPPAPFTLRRVSGKSGRNSYENIQKLEVLIYSRLMCS-DGQPVGRRGAGKVFGIDKKKLVRDWEDQEEELIE-FSKQENAGEQRPLHPGREADTKEVEEAIVDEINALRKNGAAVTQDLVLAKLLSEMPKFGGGLPSASEPQKMEQFQKRFNAWYYRFLKRHRFSIRRETSMGQKKPEGWEGKAWAFVQKLRAILREYAQDTVILERAAQAAKVGGTMEIEMDTKATAEELLAVQAKIFALMYNMDQTPIQVELPSETTPEKTGAKSACITTGGKEKLRYTVVLTVRGDGQKVRPRIIYKGSPF----VGGTKKSGAPKK 1005
R YP F + R G+ SY KL Y+R +C DGQPVG GA V + K+++ +W QEE+L E S + + +H G +A T + E+A+VD +N RK V+ KLL P GG+ + ++P++ F+ +FN+WY RF KR+ FSIRR TS+GQK P+G+EG AWA V KLR L + A + I R A ++ E T+E+L +V+A++F + NMDQTP+Q E+P ETT EKTGAK A I+TGG+EK R+T+VL V DG+KV PRII+KG+PF V G KS P+K
Sbjct: 62 RAYPEPNFPIERSGAVEGKGSYPIRFKLNAATYTRKICPCDGQPVGNNGAAIVLQVPWKRII-EWLKQEEQLREKVSANPKLSKAKQVHSGGKASTVDAEQALVDYMNEQRKQHRDCGNREVMNKLLELKPDALGGMSTNAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVKRAGE--IYARRHPPAPDESPIKGE---DLTSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGEEKERFTLVLAVMADGKKVSPRIIFKGTPFIPPTVSGKVKSTLPRK 377
BLAST of mRNA_P-littoralis_Contig636.4.1 vs. uniprot
Match: A0A6H5JQM5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM5_9PHAE) HSP 1 Score: 197 bits (502), Expect = 9.460e-55 Identity = 123/306 (40.20%), Postives = 176/306 (57.52%), Query Frame = 1
Query: 58 REYPPAPFTLRRVSGKSGRNSYENIQKLEVLIYSRLMCSDGQPVGRRGAGKVFGIDKKKLVRDWEDQEEELIEFSKQE-NAGEQRPLHPGREADTKEVEEAIVDEINALRKNGAAVTQDLVLAKLLSEMPKFGGGLPSASEPQKMEQFQKRFNAWYYRFLKRHRFSIRRETSMGQKKPEGWEGKAWAFVQKLRAILREYAQDTVILERAAQAAKVGGTMEIEMDTKATAEELLAVQAKIFALMYNMDQTPIQVELPSETTPEKTGAKSACITTGGKEKLRYTVVLTVRGDGQKVRPRIIYKGSPFV 972
R+YP + F R GK G SY KL+ + ++R++C DGQPVG GA KV +D+++++ W +E + K++ + + +H G T EVE+ + D IN R+ V+ KLL P GGL +A+ ++ F+ +F WY+RF +RH SIRR TS+GQK P G+EG A+A + KLR L E A + A + G I+ + A+ L +V ++F + NMDQTP+Q E+P ETT EK GAK A I+TGGKEK R+T+ L V DG KV RII+KG PF+
Sbjct: 56 RKYPESDFAKERTGGKKG--SYPMRFKLKAVAFTRVLCEDGQPVGNSGAAKVLAVDRRRIIT-WVGEEATMKNLVKEKPKLSKAKSIHAGVAPPTAEVEQDLEDYINEQRREHRGCGSMEVMNKLLELKPDALGGLTAAASAEETLAFRTKFKNWYHRFRERHGLSIRRRTSVGQKLPTGYEGLAFATLMKLRTALLERAGEIY----ARRNPPASGESPIKGKDLSPAQ-LESVATEVFEELGNMDQTPVQQEMPVETTLEKGGAKDARISTGGKEKERFTLCLAVMADGGKVPLRIIFKGKPFI 353
BLAST of mRNA_P-littoralis_Contig636.4.1 vs. uniprot
Match: A0A6H5JFD9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFD9_9PHAE) HSP 1 Score: 190 bits (483), Expect = 4.120e-54 Identity = 132/322 (40.99%), Postives = 180/322 (55.90%), Query Frame = 1
Query: 58 REYPPAPFTLRRVSGKSGRNSYENIQKLEVLIYSRLMCS-DGQPVGRRGAGKVFGIDKKKLVRDWEDQEEELIE-FSKQENAGEQRPLHPGREADTKEVEEAIVDEINALRKNGAAVTQDLVLAKLLSEMPKFGGGLPSASEPQKMEQFQKRFNAWYYRFLKRHRFSIRRETSMGQKKPEGWEGKAWAFVQKLRAILREYAQDTVILERAAQAAKVGGTMEIEMDTKATAEELLAVQAKIFALMYNMDQTPIQVELPSETTPEKTGAKSACITTGGKEKLRYTVVLTVRGDGQKVRPRIIYKGSPF----VGGTKKSGAPKK 1005
R YP F + R G+ SY KL+ Y+R +C DGQP + +W QEE+L E S + + +H G +A T E+A+VD I RK V+ KLL P GG+P+ ++P++ F+ +FN+WY RF KR+ FSIRR TS+ QK +G+EG A A V KLR L + A + I R A ++ E T+E+L +V+A++F + NMDQTP+Q E+P ETT EKTGAK A I+TGGKEK R+T+VL V DG+KV PRII+KG+PF V G KS P+K
Sbjct: 62 RAYPEPNFPIERSGAVGGKGSYPIRFKLKAAAYTREICPCDGQP----------------RIIEWLKQEEQLKEKVSANPKFSKAKQVHSGGKASTVHAEQALVDYIKEQRKQHRGCGNREVMNKLLELKPDALGGMPANAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRTSVRQKLQKGYEGMASATVMKLREALVKRAGE--IYARRHPPAPDESPIKGE---DLTSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPFIPPTVSGKGKSTLPRK 362
BLAST of mRNA_P-littoralis_Contig636.4.1 vs. uniprot
Match: A0A6H5K8Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y4_9PHAE) HSP 1 Score: 192 bits (487), Expect = 5.530e-51 Identity = 121/314 (38.54%), Postives = 176/314 (56.05%), Query Frame = 1
Query: 31 AKKRKGPAPREYPPAPFTLRRVSGKSGRNSYENIQKLEVLIYSRLMCSDGQPVGRRGAGKVFGIDKKKLVRDWEDQEEELIEFSKQENAGEQRPLHPGREADTKEVEEAIVDEINALRKNGAAVTQDLVLAKLLSEMPKFGGGLPSASEPQKMEQFQKRFNAWYYRFLKRHRFSIRRETSMGQKKPEGWEGKAWAFVQKLRAILREYAQDTVILERAAQAAKVGGTMEIEMDTKATAEELLAVQAKIFALMYNMDQTPIQVELPSETTPEKTGAKSACITTGGKEKLRYTVVLTVRGDGQKVRPRIIYKGSPFV 972
A K G R+YP F + Y KL+V+ ++R++C DG+P G GA KV + ++++V D+E + S + + +H +A ++EEA+V+ IN RK+ + KLL P GGL + +P++ +F +WY RF KR++FSIRR TS+GQK P+G EG AWA + KLR L E A + + +R A G I + ++++ L V ++F + NMDQTP+Q E+P ETT E TGAK A I TGGKEK R+T+ L V DG+KV RII+KG+PFV
Sbjct: 26 AAKDPGSKKRKYPEPGFPSETSGAVGKKRGYPVGFKLKVVAFTRVVCEDGKPGGNSGAAKVLDVPRRRIVEWVRDEESLRAKVSANPKLSKAKQIHARGKASRADIEEALVEFINDQRKHHVGCGSMAAMNKLLELKPDALGGLAAKPKPEEALALNSKFKSWYQRFCKRNKFSIRRRTSVGQKLPKGHEGMAWATLMKLRKALLERAGE-IYAQRYPPAP---GESPIRGEDLSSSQ-LELVTDELFEELGNMDQTPVQHEMPVETTLENTGAKDARIATGGKEKERFTLCLAVSADGKKVPLRIIFKGTPFV 334
BLAST of mRNA_P-littoralis_Contig636.4.1 vs. uniprot
Match: A0A6H5KJN9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJN9_9PHAE) HSP 1 Score: 175 bits (444), Expect = 3.320e-47 Identity = 113/269 (42.01%), Postives = 157/269 (58.36%), Query Frame = 1
Query: 79 FTLRRVSGKSGRNSYENIQKLEVLIYSRLMCS-DGQPVGRRGAGKVFGIDKKKLVRDWEDQEEELIE-FSKQENAGEQRPLHPGREADTKEVEEAIVDEINALRKNGAAVTQDLVLAKLLSEMPKFGGGLPSASEPQKMEQFQKRFNAWYYRFLKRHRFSIRRETSMGQKKPEGWEGKAWAFVQKLRAILREYAQDTVILERAAQAAKVGGTMEIEMDTKATAEELLAVQAKIFALMYNMDQTPIQVELPSETTPEKTGAKSACITTGG 879
F + R G+ SY KL Y+R +C DGQPVG GA KV + +K+++ +W QEE+L E S + + +H G +A T + E+ +VD IN RK V+ KLL P GG+P+ ++P++ F+ FN WY RF KR+ FSIRR TS+GQK P+G+EG AWA V KLR L + A + I R A ++ E T+E+L +V+A++F + NMDQTP+Q E+P ETT EKTGAK A I+TGG
Sbjct: 10 FPIERSGAVGGKGSYPIRFKLNAAAYTREICPCDGQPVGNNGAAKVLQVPRKRII-EWLKQEEQLREKVSANPKLSKAKQVHSGGKASTVDAEQVLVDYINEQRKQHRGCGNREVMNKLLELKPDALGGMPANAKPEEALAFKVNFNPWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVKRAGE--IYARRHPPAPDESPIKGE---DLTSEQLASVKAEVFEELGNMDQTPVQHEMPVETTLEKTGAKDARISTGG 272
BLAST of mRNA_P-littoralis_Contig636.4.1 vs. uniprot
Match: A0A6H5L819_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L819_9PHAE) HSP 1 Score: 171 bits (432), Expect = 2.500e-46 Identity = 115/283 (40.64%), Postives = 167/283 (59.01%), Query Frame = 1
Query: 184 PVGRRGAGKV----FGIDKKKLVRDWEDQEEELIE-FSKQENAGEQRPLHPGREADTKEVEEAIVDEINALRKNGAAVTQDLVLAKLLSEMPKFGGGLPSASEPQKMEQFQKRFNAWYYRFLKRHRFSIRRETSMGQKKPEGWEGKAWAFVQKLRAILREYAQDTVILERAAQAAKVGGTMEIEMDTKATAEELLAVQAKIFALMYNMDQTPIQVELPSETTPEKTGAKSACITTGGKEKLRYTVVLTVRGDGQKVRPRIIYKGSPF----VGGTKKSGAPKK 1005
P+ R G+G+ + +K+++ +W QEE+L E S + + +H G +A + E+A+VD IN K V+ KLL P GG+P+ ++P++ F+ +FN+WY RF KR+ F IRR TS+GQK P+G+EG AWA V KLR L + A + I R A ++ E T+E+L +V+A++F + M QTP+Q E+P T EKTGAK A I+TGGKEK R+T+VL V DG+KV PR I+KG+PF + G KS P+K
Sbjct: 70 PIERSGSGRERELPHPVPRKRII-EWLKQEEQLREKVSANPKLSKAKQVHSGGKASIVDAEQALVDYINERHKQHRGCGNREVMNKLLELKPDALGGVPANAKPEEALAFKVKFNSWYQRFRKRNGFRIRRRTSVGQKLPKGYEGMAWATVMKLREALVKRAGE--IYARRHPPAHDESPIKGE---DLTSEQLASVEAEVFEEVGIMGQTPVQHEVPVAITLEKTGAKDARISTGGKEKERFTLVLAVMADGKKVSPRNIFKGTPFFPPTMSGKGKSTLPRK 346
BLAST of mRNA_P-littoralis_Contig636.4.1 vs. uniprot
Match: A0A6H5JTG5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTG5_9PHAE) HSP 1 Score: 173 bits (438), Expect = 1.800e-45 Identity = 116/278 (41.73%), Postives = 164/278 (58.99%), Query Frame = 1
Query: 187 VGRRGAGKVFGIDKKKLVRDWEDQEEELIE-FSKQENAGEQRPLHPGREADTKEVEEAIVDEINALRKNGAAVTQDLVLAKLLSEMPKFGGGLPSASEPQKMEQFQKRFNAWYYRFLKRHRFSIRRETSMGQKKPEGWEGKAWAFVQKLRAILREYAQDTVILERAAQAAKVGGTMEIEMDTKATAEELLAVQAKIFALMYNMDQTPIQVELPSETTPEKTGAKSACITTGGKEKLRYTVVLTVRGDGQKVRPRIIYKGSPF----VGGTKKSGAPKK 1005
VG +G+ + +K + +W QE +L E S + + +H G +A T + E+A+VD IN RK V+ KLL P GG+P+ ++P++ F+ +FN+WY RF KR+ FSIRR S+GQK P+G+EG AWA V KLR L + A + I R A ++ E T+E+ +V+A++F + NMDQTP+Q E+P ETT E TG K A I+TGGKEK R+T+VL V DG+ V P II+KG+PF V G KS P+K
Sbjct: 77 VGGKGSYPIRLQVPRKRIIEWLKQEGQLREKVSANPKLSKAKQVHSGGKASTVDAEQALVDYINEQRKLHRGCGNREVMNKLLELKPDALGGMPANAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRASVGQKLPKGYEGMAWATVTKLREALVKRAGE--IYARRHPPAPDESPIKGE---DLTSEQPASVEAEVFEELGNMDQTPVQHEMPVETTLEDTGGKDARISTGGKEKERFTLVLAVMADGKMVSPCIIFKGTPFIPPTVSGKGKSTLPRK 349
BLAST of mRNA_P-littoralis_Contig636.4.1 vs. uniprot
Match: A0A6H5KFQ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFQ9_9PHAE) HSP 1 Score: 166 bits (419), Expect = 6.260e-45 Identity = 112/276 (40.58%), Postives = 158/276 (57.25%), Query Frame = 1
Query: 58 REYPPAPFTLRRVSGKSGRNSYENIQKLEVLIYSRLMCS-DGQPVGRRGAGKVFGIDKKKLVRDWEDQEEELIE-FSKQENAGEQRPLHPGREADTKEV-EEAIVDEINALRKNGAAVTQDLVLAKLLSEMPKFGGGLPSASEPQKMEQFQKRFNAWYYRFLKRHRFSIRRETSMGQKKPEGWEGKAWAFVQKLRAILREYAQDTVILERAAQAAKVGGTMEIEMDTKATAEELLAVQAKIFALMYNMDQTPIQVELPSETTPEKTGAKSACITTG 876
R YP F + R G+ SY KL+ Y+R +C DGQPVG G KV + +K+++ +W QEE+L E S + + + G +A T + E+A+VD IN RK V+ KLL P GG+P+ ++P++ F+ +FN+WY +F KR+ FSIRR TS+GQK P+G+EG AWA V LR L + A I R A ++ E T E+L +V+A++F + NMDQTP+Q E+P ETT EKTGAK A I+TG
Sbjct: 65 RAYPEPNFPIERSGAVGGKGSYPIRFKLKAAAYTREICPCDGQPVGNNGGAKVLQVPRKRII-EWLKQEEQLREKVSANPKLSKAKQVPSGGKASTVDAAEQALVDYINEQRKQHRGCGNREVINKLLQLKPDALGGMPANAKPEEALAFKIKFNSWYQQFRKRNGFSIRRRTSVGQKLPKGYEGTAWATVMNLREALVQRAG--AIHARRNPPAPDESPIKGE---DLTCEQLASVEAEVFEELGNMDQTPVQHEMPVETTLEKTGAKDARISTG 334
BLAST of mRNA_P-littoralis_Contig636.4.1 vs. uniprot
Match: A0A6H5JHT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT8_9PHAE) HSP 1 Score: 169 bits (428), Expect = 9.620e-44 Identity = 113/284 (39.79%), Postives = 167/284 (58.80%), Query Frame = 1
Query: 175 DGQPVGRRGAGKVFGIDKKKLVRDWEDQEEELIE-FSKQENAGEQRPLHPGREADTKEVEEAIVDEINALRKNGAA-VTQDLVLAKLLSEMPKFGGGLPSASEPQKMEQFQKRFNAWYYRFLKRHRFSIRRETSMGQKKPEGWEGKAWAFVQKLRAILREYAQDTVILERAAQAAKVGGTMEIEMDTKATAEELLAVQAKIFALMYNMDQTPIQVELPSETTPEKTGAKSACITTGG-KEKLRYTVVLTVRGDGQKVRPRIIYKGSPF----VGGTKKSGAPKK 1005
DGQPVG GA KV + +K+++ +W E +L E S + + +H G + T + E+ ++ A + V+ KLL P GG+P+ ++P++ F+ +FN+WY RF KR+ FSIRR TS+GQK P+G+EG AWA V KL L + A + + R A ++++ E+L +V+A++F + NMDQ P+Q E+P ETT +KTGAK A I+TGG EK R+T+VL V DG+KV PRII++G+PF V G KS P+K
Sbjct: 113 DGQPVGNNGAAKVLQVPRKRII-EWLKPEAQLREKVSANPKLSKAKQVHSGGKVSTVDAEQPFPCGLHQRATQAAPRLGNREVMNKLLELKPDALGGMPANAKPEEAIDFKFKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLCEALVKRAGE-IYARRHPPAPDESPIKGEDLNS----EQLASVEAEVFEEVGNMDQMPVQHEMPVETTLDKTGAKDARISTGGGNEKERFTLVLAVTADGKKVSPRIIFEGTPFIPPTVSGKGKSTRPRK 390
BLAST of mRNA_P-littoralis_Contig636.4.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE) HSP 1 Score: 164 bits (415), Expect = 3.790e-43 Identity = 99/198 (50.00%), Postives = 131/198 (66.16%), Query Frame = 1
Query: 424 KLLSEMPKFGGGLPSASEPQKMEQFQKRFNAWYYRFLKRHRFSIRRETSMGQKKPEGWEGKAWAFVQKLRAILREYAQDTVILERAAQAAKVGGTMEIEMDTKATAEELLAVQAKIFALMYNMDQTPIQVELPSETTPEKTGAKSACITTGGKEKLRYTVVLTVRGDGQKVRPRIIYKGSPF----VGGTKKSGAPKK 1005
KLL P GG+P+ ++P++ F+ +FN+WY RF KR+ FSIRR TS+GQK P+G EG AWA V KLR L + A + I R A ++ E T+E+L +V+A++F + NMDQTP+Q E+P ETT EKTGAK A I+TGGKEK R+T+VL V DG+KV PRII+KG+PF V G KS P+K
Sbjct: 3 KLLELKPDALGGMPANAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGDEGMAWATVMKLREALVKRAGE--IYARRHPPAPDESPIKGE---DLTSEQLASVEAEVFEELGNMDQTPVQHEIPVETTLEKTGAKDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPFTPPTVSGKGKSTLPRK 195 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig636.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig636.4.1 >prot_P-littoralis_Contig636.4.1 ID=prot_P-littoralis_Contig636.4.1|Name=mRNA_P-littoralis_Contig636.4.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=336bp WGSLPRPSASAKKRKGPAPREYPPAPFTLRRVSGKSGRNSYENIQKLEVLback to top mRNA from alignment at P-littoralis_Contig636:12278..13847- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig636.4.1 ID=mRNA_P-littoralis_Contig636.4.1|Name=mRNA_P-littoralis_Contig636.4.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1570bp|location=Sequence derived from alignment at P-littoralis_Contig636:12278..13847- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig636:12278..13847- >mRNA_P-littoralis_Contig636.4.1 ID=mRNA_P-littoralis_Contig636.4.1|Name=mRNA_P-littoralis_Contig636.4.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1008bp|location=Sequence derived from alignment at P-littoralis_Contig636:12278..13847- (Pylaiella littoralis U1_48)back to top |