prot_P-littoralis_Contig630.22.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig630.22.1
Unique Nameprot_P-littoralis_Contig630.22.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length154
Homology
BLAST of mRNA_P-littoralis_Contig630.22.1 vs. uniprot
Match: A0A6H5LEE0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LEE0_9PHAE)

HSP 1 Score: 77.4 bits (189), Expect = 1.200e-13
Identity = 60/166 (36.14%), Postives = 87/166 (52.41%), Query Frame = 0
Query:    1 STIHVN---KGD--------FVPIPYSKFAPGKKKETL--WQPLCRLAYN-TFMGVDLADQLNGYYLTLHKAYNYFWRRVFEQKLMQACSNAWLLYKWWLADMLVQVNEEITKVEKGGYAEGTPERLQLQALENEQADLRKLQNKKRAQWLRALAMHLIAQSTLGR 152
            STIHV    KG         F P+P S  A G+  E L   QP  R+ Y    +GVDLADQ NG +   HK+Y  FWRRV++ KL QA +NA+L+++ W+ ++L++  E    +  GG         +L+ LE    +L  L   +RA W   +A  L+A+  + R
Sbjct:  566 STIHVAQPAKGKEEAGGIDHFKPLPLSLRAKGRNGEPLDLQQPYMRMDYVLNMLGVDLADQQNGSHTHDHKSYTNFWRRVYDAKLEQALTNAFLIFRKWV-ELLIREVEAKKPIAPGG---------ELEELELASTELATLSKVERAVWDEQMATLLMAECNVAR 721          
BLAST of mRNA_P-littoralis_Contig630.22.1 vs. uniprot
Match: A0A6H5JER6_9PHAE (DDE_Tnp_1_7 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JER6_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 2.700e-13
Identity = 53/146 (36.30%), Postives = 80/146 (54.79%), Query Frame = 0
Query:   10 FVPIPYSKFAPGKKKETL--WQPLCRLAYN-TFMGVDLADQLNGYYLTLHKAYNYFWRRVFEQKLMQACSNAWLLYKWWLADMLVQVNEEITKVEKGGYAEGTPERLQLQALENEQADLRKLQNKKRAQWLRALAMHLIAQSTLGR 152
            F P+P S  A G+  E L   QP  R+ Y    +GVDLADQ NG +   HK+Y  FWRRV++ KL QA +NA+L+++ W+ ++L++  E    +  GG         +L+ LE    +L  L   +RA W   +A  L+A+  + R
Sbjct:  262 FKPLPLSLRAKGRNGEPLDLQQPWTRMDYFLNMLGVDLADQQNGSHTHDHKSYTNFWRRVYDAKLEQALTNAFLIFRKWV-ELLIREVEPKKPITPGG---------ELEELELASTELATLSKVERAVWDEQMATLLMAKCNVAR 397          
BLAST of mRNA_P-littoralis_Contig630.22.1 vs. uniprot
Match: A0A6H5JDZ7_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDZ7_9PHAE)

HSP 1 Score: 60.5 bits (145), Expect = 8.960e-8
Identity = 31/58 (53.45%), Postives = 37/58 (63.79%), Query Frame = 0
Query:   29 QPLCRLAYNTFMG-VDLADQLNGYYLTLHKAYNYFWRRVFEQKLMQACSNAWLLYKWW 85
            QPL R  Y   MG VD+ADQ  G +   H+   +FWRRVF+QKL  A SNAWLL+  W
Sbjct:  289 QPLARKKYVKNMGGVDVADQRLGAHAHTHRPMTFFWRRVFDQKLSHAVSNAWLLFYEW 346          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig630.22.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5LEE0_9PHAE1.200e-1336.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JER6_9PHAE2.700e-1336.30DDE_Tnp_1_7 domain-containing protein (Fragment) n... [more]
A0A6H5JDZ7_9PHAE8.960e-853.45DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ecto... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 111..135

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig630contigP-littoralis_Contig630:168882..170119 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig630.22.1mRNA_P-littoralis_Contig630.22.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig630 168882..170120 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig630.22.1 ID=prot_P-littoralis_Contig630.22.1|Name=mRNA_P-littoralis_Contig630.22.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=154bp
STIHVNKGDFVPIPYSKFAPGKKKETLWQPLCRLAYNTFMGVDLADQLNG
YYLTLHKAYNYFWRRVFEQKLMQACSNAWLLYKWWLADMLVQVNEEITKV
EKGGYAEGTPERLQLQALENEQADLRKLQNKKRAQWLRALAMHLIAQSTL
GRQG
back to top