mRNA_P-littoralis_Contig63.114.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig63.114.1 vs. uniprot
Match: D7FI26_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI26_ECTSI) HSP 1 Score: 343 bits (880), Expect = 1.020e-108 Identity = 174/220 (79.09%), Postives = 183/220 (83.18%), Query Frame = 1
Query: 133 EEEAEELWARFCKVRGDLVTPLELDFPWITGESLARVDGFGAHTAIKLVGFIKASLPDWKKRIQNRNSNAPRGSPSVLIVCAGARRCVEVMKHLTAFRCQVVKLFAKHLKVEEQKVMLRKGCFPLGDTISLAKAEAATRRWLLFSAGYTRYTATRLVEVGTPGRMRALAAAGSLRLDSSALVVLDLEKNIKGRNVLDMDSVAADTMSFLSDCVRPHLVSS 792
EEEAEELWARFCKVRGDLVTPLELDFPWIT SLARV+GFGAHTA+KLVGFIKASLPDWKKRIQNRNSNAPRGSPSVLIVC GARRCVEVMKHLTAFRCQVVKLFAKHLK+EEQKVMLRKGCFPLG VGTPGRMRALAAAGSLRLDSSALV+LDLEKN+KGR+VLDMD V+ DTM+FLSDCVRPHLVS+
Sbjct: 165 EEEAEELWARFCKVRGDLVTPLELDFPWITAGSLARVEGFGAHTAMKLVGFIKASLPDWKKRIQNRNSNAPRGSPSVLIVCTGARRCVEVMKHLTAFRCQVVKLFAKHLKIEEQKVMLRKGCFPLG--------------------------------VGTPGRMRALAAAGSLRLDSSALVILDLEKNVKGRSVLDMDGVSGDTMAFLSDCVRPHLVSA 352
BLAST of mRNA_P-littoralis_Contig63.114.1 vs. uniprot
Match: A0A835YSW0_9STRA (U3-containing 90S pre-ribosomal complex subunit-domain containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSW0_9STRA) HSP 1 Score: 154 bits (388), Expect = 7.780e-38 Identity = 95/246 (38.62%), Postives = 130/246 (52.85%), Query Frame = 1
Query: 133 EEEAEELWARFCKVRGDLVTPLELDFPWITGESLARVDGFGAHTAIKLVGFIKASLPDWKKRI-----QNRNSNA--------PRG-----------SPSVLIVCAGARRCVEVMKHLTAFRCQVVKLFAKHLKVEEQKVMLRKGCFPLGDTISLAKAEAATRRWLLFSAGYTRYTATRLVEVGTPGRMRALAAAGSLRLDSSALVVLDLEKNIKGRNVLDMDSVAADTMSFLSDCVRPHLVSSSG 798
++ A+ +W R C V G + +EL PW+ E +A ++ FGAHT KL G+IKA+LP+W+ ++R S PRG SP ++IVC+GARRC+EV+K L+ FRCQV+KLFAKHLK EQ MLR+ FP+ VGTPGR+ LAA G++ L + L++LD ++ KGR+VLDM D L VRPHL S+ G
Sbjct: 124 QQAADAVWERCCAVLGPQLAEIELLTPWVEAEDMAVLEQFGAHTIAKLPGYIKATLPNWRALTAAAPAKDRGSGGAVKWGAGKPRGGGAKPPAPGAGSPPIVIVCSGARRCMEVIKALSPFRCQVLKLFAKHLKPAEQAKMLRR-YFPIA--------------------------------VGTPGRVLKLAAEGAVALGGTQLLLLDAARDAKGRSVLDMAGAREDLCELLRAHVRPHLRSAPG 336
BLAST of mRNA_P-littoralis_Contig63.114.1 vs. uniprot
Match: A0A7S3XUU3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUU3_HETAK) HSP 1 Score: 119 bits (298), Expect = 5.010e-27 Identity = 78/217 (35.94%), Postives = 109/217 (50.23%), Query Frame = 1
Query: 154 WARFCKVRGDLVTPLELDFPWITGESLARVDGFGAHTAIKLVGFIKASLPDWKKRIQ---------NRNSNAP--RGSPSVLIVCAGARRCVEVMKHLTAFRCQVVKLFAKHLKVEEQKVMLRKGCFPLGDTISLAKAEAATRRWLLFSAGYTRYTATRLVEVGTPGRMRALAAAGSLRLDSSALVVLDLEKNIKGRNVLDMDSVAADTMSFLSDCV 771
WA++ V G +T LEL + + V A LV F+KA +P WK ++Q R + AP RGSP VL+VCAGARRCV ++K L FRC V KLFAKH+K++EQ+ +L+K C P+ VGTP R+ LA G L L+S+ L++ D+ K++K +LD++ V D M F V
Sbjct: 12 WAKYVGVMGGKLTDLELRPENVPEGAFLPV----AAPPEPLVDFVKAHVPGWKVKLQLAKGQNRKFARAAAAPQARGSPRVLVVCAGARRCVALLKGLAVFRCPVAKLFAKHMKIQEQQKLLKK-CAPIA--------------------------------VGTPSRLLKLAQFGDLCLESTELIIFDMGKDVKQMTILDVNGVKEDLMDFFKTTV 191
BLAST of mRNA_P-littoralis_Contig63.114.1 vs. uniprot
Match: A0A6A3I4I1_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3I4I1_9STRA) HSP 1 Score: 100 bits (250), Expect = 7.200e-20 Identity = 68/207 (32.85%), Postives = 94/207 (45.41%), Query Frame = 1
Query: 163 FCKVRGDLVTPLELDFPWITGESLARVDGFGAHTAIKLVGFIKASLPDWKKRIQNRNSNAPRGSPSVLIVCAGARRCVEVMKHLTAFRCQVVKLFAKHLKVEEQKVMLRKGCFPLGDTISLAKAEAATRRWLLFSAGYTRYTATRLVEVGTPGRMRALAAAGSLRLDSSALVVLDLEKNIKGRNVLDMDSVAADTMSFLSDCVRPHL 783
+ K RG +T LEL +T G G H +L +I LP +KK + + SP LI+C+ A RCV+V+KHLT F+C+V KLFAKHLKV+EQ L P+ VGTP R++ L G+L L + V+ D+EK+ K VL++ A + M L P L
Sbjct: 102 YTKHRGGQMTSLELA-DGLTETHFVAPKGLGKHRLDRLPAYIHQLLPSFKKDFVGKGKRRDK-SPYFLILCSSALRCVDVIKHLTPFKCRVAKLFAKHLKVDEQAKQLANMYLPIA--------------------------------VGTPARVKKLLEMGALSLKHTTHVIFDMEKDKKQLTVLELKDTATEMMDLLQFYFTPLL 274
BLAST of mRNA_P-littoralis_Contig63.114.1 vs. uniprot
Match: A0A2D4C5F1_PYTIN (Ubiquitin-specific protease, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C5F1_PYTIN) HSP 1 Score: 100 bits (250), Expect = 9.850e-20 Identity = 66/221 (29.86%), Postives = 102/221 (46.15%), Query Frame = 1
Query: 121 NTNPEEEAEELWARFCKVRGDLVTPLELDFPWITGESLARVDGFGAHTAIKLVGFIKASLPDWKKRIQNRNSNAPRGSPSVLIVCAGARRCVEVMKHLTAFRCQVVKLFAKHLKVEEQKVMLRKGCFPLGDTISLAKAEAATRRWLLFSAGYTRYTATRLVEVGTPGRMRALAAAGSLRLDSSALVVLDLEKNIKGRNVLDMDSVAADTMSFLSDCVRPHL 783
N P E + + + K RG +T LE+ +T G G HT L +++ +P WK + + + SP LIVC+ A R VEV+KHL++FRC+V KLFA+H+K +EQ+ L P+ VGTP R++ L ++ L ++ V+LD+ K+ K +LD+ + DTM L + P L
Sbjct: 107 NMTPAEHFKLVNDYYIKHRGGQLTTLEIA-EGLTEHHFVAPKGLGKHTLQSLPLYMRHCVPTWKHDFRGKKIKYDK-SPIFLIVCSSALRAVEVLKHLSSFRCKVAKLFARHMKAKEQEDQLTLHFHPIA--------------------------------VGTPARLKKLLEMDAMSLQHTSHVILDMAKDKKNMTILDLKDTSKDTMELLQFYLLPRL 293
BLAST of mRNA_P-littoralis_Contig63.114.1 vs. uniprot
Match: A0A067BQF7_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BQF7_SAPPC) HSP 1 Score: 98.6 bits (244), Expect = 3.460e-19 Identity = 64/208 (30.77%), Postives = 101/208 (48.56%), Query Frame = 1
Query: 163 FCKVRGDLVTPLELDFPWITGESLARVDGFGAHTAIKLVGFIKASLPDWKKRIQNRNSNAPRGSPSVLIVCAGARRCVEVMKHLTAFRCQVVKLFAKHLKVEEQKVMLRKGCFPLGDTISLAKAEAATRRWLLFSAGYTRYTATRLVEVGTPGRMRALAAAGSLRLDSSALVVLDLEKNIKGRNVLDMDSVAADTMSFLSDCVRPHLV 786
+ K GD +TP E+ +T + FG HT F++A P+WK + + R SP +LIVC+ A R VE+ K + +F+C V KLFAKHLK+EEQ ML++ + +GTPGR++ L +L L+ ++ VVLD+ + K ++L++ + DT+ DC+R L+
Sbjct: 92 YMKHYGDSLTPAEIA-DGLTESHFTVLKQFGKHTLESYTRFLRALCPEWKFLFRGKGIKDKR-SPLLLIVCSSALRAVEIGKAIASFKCHVAKLFAKHLKLEEQVEMLKR---------------------------------FHPIAIGTPGRIKTLLEMKALSLECTSHVVLDMHLDSKNMSLLELKDTSKDTI----DCIRESLL 260
BLAST of mRNA_P-littoralis_Contig63.114.1 vs. uniprot
Match: A0A6S7HKP8_PARCT (Uncharacterized protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HKP8_PARCT) HSP 1 Score: 95.9 bits (237), Expect = 3.950e-18 Identity = 61/216 (28.24%), Postives = 98/216 (45.37%), Query Frame = 1
Query: 133 EEEAEELWARFCKVRGDLVTPLELDFPWITGESLARVDGFGAHTAIKLVGFIKASLPDWKKRIQNRNSNAPRGSPSVLIVCAGARRCVEVMKHLTAFR--CQVVKLFAKHLKVEEQKVMLRKGCFPLGDTISLAKAEAATRRWLLFSAGYTRYTATRLVEVGTPGRMRALAAAGSLRLDSSALVVLDLE-KNIKGRNVLDMDSVAADTMSFLSDCV 771
E +E WA FCK D +T LEL+ + E L +++ LP W I +S G+P +LI+ A A R ++++ + FR C+V+KLF+KH+K+EEQ+ L K LG VGTP R+ L +G+L+L + V+LD ++ K R ++D+ + D ++ L D +
Sbjct: 93 ESISETFWASFCKATEDKLTALELEDLTVEDEMFLTEPSVHTGQLQSLSPYLRVVLPSWSNLITKIDSKGANGAPGLLIITAAATRATDIVRATSEFRSTCKVIKLFSKHIKLEEQESYLEKNVVHLG--------------------------------VGTPNRICKLIKSGALKLSNLKSVILDWTWRDAKQRRLMDIPEIKQDLVTLLKDII 276
BLAST of mRNA_P-littoralis_Contig63.114.1 vs. uniprot
Match: A0A8K1CKQ2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CKQ2_PYTOL) HSP 1 Score: 94.7 bits (234), Expect = 9.920e-18 Identity = 62/207 (29.95%), Postives = 96/207 (46.38%), Query Frame = 1
Query: 163 FCKVRGDLVTPLELDFPWITGESLARVDGFGAHTAIKLVGFIKASLPDWKKRIQNRNSNAPRGSPSVLIVCAGARRCVEVMKHLTAFRCQVVKLFAKHLKVEEQKVMLRKGCFPLGDTISLAKAEAATRRWLLFSAGYTRYTATRLVEVGTPGRMRALAAAGSLRLDSSALVVLDLEKNIKGRNVLDMDSVAADTMSFLSDCVRPHL 783
+ K RG +T LEL +A G G HT L +++ P WK + + + S L++C+ A R VEV+KH +F+C+V KLFAKH+KVE+Q++ L K P + VGTPGR++ L +L L+ + V +D+EK+ K +L++ A + M L + P L
Sbjct: 109 YIKQRGGQMTTLELAEGLAESHFVAPA-GLGKHTLPNLSLYMRHLRPAWKVDFKGKGKKYDK-STYFLVICSSALRAVEVLKHFGSFKCKVAKLFAKHMKVEDQEIQLAKTFNP--------------------------------ISVGTPGRIKKLLEINALSLEHTTHVFIDMEKDKKAMTLLELKDTAKEMMELLQFHLLPQL 281
BLAST of mRNA_P-littoralis_Contig63.114.1 vs. uniprot
Match: A0A8J5M5A2_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A8J5M5A2_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 4.190e-17 Identity = 67/217 (30.88%), Postives = 95/217 (43.78%), Query Frame = 1
Query: 133 EEEAEELWARFCKVRGDLVTPLELDFPWITGESLARVDGFGAHTAIKLVGFIKASLPDWKKRIQNRNSNAPRGSPSVLIVCAGARRCVEVMKHLTAFRCQVVKLFAKHLKVEEQKVMLRKGCFPLGDTISLAKAEAATRRWLLFSAGYTRYTATRLVEVGTPGRMRALAAAGSLRLDSSALVVLDLEKNIKGRNVLDMDSVAADTMSFLSDCVRPHL 783
+E E + + K RG +T LEL + G G H L +I LP +K+ + + SP LI+C+ A RCVEV+KHLT F+C+V KLFAKH+K +EQ L P+ VGTP R++ L +L L + V+ D+EK+ K VL++ A + M L PHL
Sbjct: 1256 DEHFEIVNNAYIKHRGGQMTSLELA-DGLNESHFVAPKGLGKHKLELLPSYIHHLLPSFKRDFVGKGKRRDK-SPYFLILCSSALRCVEVIKHLTPFKCRVAKLFAKHMKADEQAKQLANNYLPIA--------------------------------VGTPARVKKLLEMNALSLKHTTHVIFDMEKDKKQLTVLELKDTATEMMDLLQFHFIPHL 1438
BLAST of mRNA_P-littoralis_Contig63.114.1 vs. uniprot
Match: H3H2I1_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H2I1_PHYRM) HSP 1 Score: 92.0 bits (227), Expect = 6.860e-17 Identity = 64/207 (30.92%), Postives = 91/207 (43.96%), Query Frame = 1
Query: 163 FCKVRGDLVTPLELDFPWITGESLARVDGFGAHTAIKLVGFIKASLPDWKKRIQNRNSNAPRGSPSVLIVCAGARRCVEVMKHLTAFRCQVVKLFAKHLKVEEQKVMLRKGCFPLGDTISLAKAEAATRRWLLFSAGYTRYTATRLVEVGTPGRMRALAAAGSLRLDSSALVVLDLEKNIKGRNVLDMDSVAADTMSFLSDCVRPHL 783
+ K RG +T LEL ++G G H L +I LP +K+ + + SP LI+C+ A RCVEV+KHLT F+C+V KLFAKH+KV EQ L K P+ VGTP R++ L +L L + V+ D+EK+ K VL++ + + L P L
Sbjct: 105 YTKHRGGQMTSLEL---------ADGLNGLGKHKLELLPAYIHHLLPTFKRDFAGKGKRRDK-SPYFLILCSSALRCVEVIKHLTPFKCRVGKLFAKHMKVAEQATQLAKTYLPMA--------------------------------VGTPARVKKLLEMDALSLQHTTHVIFDMEKDKKQLTVLELKDTVTEMVDLLQFYFIPQL 269 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig63.114.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig63.114.1 >prot_P-littoralis_Contig63.114.1 ID=prot_P-littoralis_Contig63.114.1|Name=mRNA_P-littoralis_Contig63.114.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=167bp MKHLTAFRCQVVKLFAKHLKVEEQKVMLRKGCFPLGDTISLAKAEAATRRback to top mRNA from alignment at P-littoralis_Contig63:537536..541322- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig63.114.1 ID=mRNA_P-littoralis_Contig63.114.1|Name=mRNA_P-littoralis_Contig63.114.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3787bp|location=Sequence derived from alignment at P-littoralis_Contig63:537536..541322- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig63:537536..541322- >mRNA_P-littoralis_Contig63.114.1 ID=mRNA_P-littoralis_Contig63.114.1|Name=mRNA_P-littoralis_Contig63.114.1|organism=Pylaiella littoralis U1_48|type=CDS|length=501bp|location=Sequence derived from alignment at P-littoralis_Contig63:537536..541322- (Pylaiella littoralis U1_48)back to top |