prot_P-littoralis_Contig63.60.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig63.60.1
Unique Name	prot_P-littoralis_Contig63.60.1
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	623

Homology

[Close]

BLAST of mRNA_P-littoralis_Contig63.60.1 vs. uniprot
Match: D7FI56_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI56_ECTSI)

HSP 1 Score: 317 bits (813), Expect = 3.990e-97
Identity = 301/644 (46.74%), Postives = 342/644 (53.11%), Query Frame = 0

Query:    1 MSGMVESSSDDGNMSE--YDFVEVEATYSSSDDAD-TITSSLAPPKDWSTLSLSDADGVITKASVKVAAVAVNDAPRGRREFISSPIAAAAATSSIXXXXXXXXXXXFEPGXXLXXXXXXXXXXXXHGCLECPTCRRLLRDXXXXXTYHTLFCREHLRVDS-NGKSPCPCAPCFSSSSSSSVSTPPERAPISTLVEATPTPQKL-------HPVESFLPNIPVQRMADAVPSVCEGCGTSLSWGELGLHACDQQLVPCDAAASGCGWYGQRSRLPDH-ASNCRVVQLRLNEEARRDKIVREAREEAAELRAGLAAARERASTAEMRALELEERVARAERSLEK---ERAVF---VTKQNELEGLLREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGKNGVCGGLARSYPAPPTTFGGLFNNSALYSPNRTPTQRIPICTPAVTAATAVKAATTGASCTTPNSNKQPPSPISLAIAAVARKKN----QAEVIATAEGTQTAAAVAAVASTASRGTGPPVRSSSNTKGKGAHSAAVQKARXXXXXXXXXXXXVMMDTACQAPVPASEACLKPYLEKPSSLLDKKVVVFWPRQGKWYAGRPTVYKEATKEHRVEYDDGDVRDHVLAHRAWGLIG 622
            MSGM+ESSSDDG MS+  +DFVEVE   S S D D T+TSSLAPPK WSTLSLSDA+ V T  +                EFIS+PIAAA+   +            FEP                     C  C  LLRD     T H+LFCREHL VD  NG SPCPC PC               API+T + A  T           HP E+FLPNIP+QR+ADAVPS C+GCG SLSWGELG HACDQQLVPC     GC W+G+R     H AS+    +L L   A+ + +  EAR EAA LRA                      +A AER L++   E A     +T           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                    F  + N +  +SP    T                                   +P+ L +A   RKK+    +A  IAT   TQT      V STASR +G           KG  SAAVQ AR            VMMDTA QAPVPA EACLKPYLE+PSSLL+KKVVVFWPRQG+WY GRPTVYKEAT+EHRVEYDDGDVRDHVLAHR+WGLIG
Sbjct:    1 MSGMLESSSDDGCMSDHSFDFVEVEGGTSYSSDGDATVTSSLAPPKGWSTLSLSDAEAVKTGPAAVTXXXXXXXXXXXXXEFISTPIAAASFCQTAAAVTKSSTR--FEPSSL--------------AAFSCRACGNLLRDCVECPTCHSLFCREHLVVDKQNGTSPCPCEPC-------------SLAPIATTLSAASTXXXXXXXRAHHHPREAFLPNIPLQRIADAVPSRCDGCGISLSWGELGRHACDQQLVPCGRRQHGCSWFGKRHEREAHEASSTCPGRLAL---AQAEAL--EARSEAARLRAAXXXXXXXXXXXXXXXXXXXXXLAAAERCLQERDQEAAALRGKITTMTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAMPFAAILNRAG-FSPQTATTXXXXXX-----------------------------APVRLPLAVPDRKKSGAGSRAAAIAT---TQTV-----VPSTASRASG-------RGTAKGTLSAAVQMARAGGSPPRASAG-VMMDTASQAPVPAVEACLKPYLERPSSLLEKKVVVFWPRQGRWYTGRPTVYKEATREHRVEYDDGDVRDHVLAHRSWGLIG 564

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig63.60.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig63.60.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7FI56_ECTSI	3.990e-97	46.74	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 287..335
None	No IPR available	GENE3D	2.30.30.140		coord: 564..616 e-value: 2.6E-6 score: 28.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 91..117
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 504..520
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 502..532
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	SUPERFAMILY	49599	TRAF domain-like	coord: 224..272

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig63	contig	P-littoralis_Contig63:314336..322013 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig63.60.1	mRNA_P-littoralis_Contig63.60.1	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig63 314194..322785 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig63.60.1 ID=prot_P-littoralis_Contig63.60.1|Name=mRNA_P-littoralis_Contig63.60.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=623bp
MSGMVESSSDDGNMSEYDFVEVEATYSSSDDADTITSSLAPPKDWSTLSL
SDADGVITKASVKVAAVAVNDAPRGRREFISSPIAAAAATSSINKNKGST
SSTRFEPGPGLTPQQQQQQQQQQHGCLECPTCRRLLRDCVECPTYHTLFC
REHLRVDSNGKSPCPCAPCFSSSSSSSVSTPPERAPISTLVEATPTPQKL
HPVESFLPNIPVQRMADAVPSVCEGCGTSLSWGELGLHACDQQLVPCDAA
ASGCGWYGQRSRLPDHASNCRVVQLRLNEEARRDKIVREAREEAAELRAG
LAAARERASTAEMRALELEERVARAERSLEKERAVFVTKQNELEGLLREE
EKKTTAATTKAAAAAAAAAASSAAVKREQRKPAAASCSSGGKNGVCGGLA
RSYPAPPTTFGGLFNNSALYSPNRTPTQRIPICTPAVTAATAVKAATTGA
SCTTPNSNKQPPSPISLAIAAVARKKNQAEVIATAEGTQTAAAVAAVAST
ASRGTGPPVRSSSNTKGKGAHSAAVQKARRGGSAAAASSGGVMMDTACQA
PVPASEACLKPYLEKPSSLLDKKVVVFWPRQGKWYAGRPTVYKEATKEHR
VEYDDGDVRDHVLAHRAWGLIG*