prot_P-littoralis_Contig63.19.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig63.19.1
Unique Nameprot_P-littoralis_Contig63.19.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length174
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig63.19.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 33..59
e-value: 4.4
score: 16.3
coord: 4..30
e-value: 0.25
score: 20.4
coord: 113..135
e-value: 46.0
score: 7.4
coord: 137..160
e-value: 0.84
score: 18.7
coord: 89..112
e-value: 3.0
score: 16.9
coord: 61..87
e-value: 3.4
score: 16.7
IPR013087Zinc finger C2H2-typePFAMPF00096zf-C2H2coord: 63..81
e-value: 0.0011
score: 19.3
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 139..160
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 91..112
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 114..135
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 33..59
score: 9.390121
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 4..30
score: 10.782589
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 61..87
score: 9.369337
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 137..165
score: 8.517231
IPR022755Zinc finger, double-stranded RNA bindingPFAMPF12171zf-C2H2_jazcoord: 35..55
e-value: 2.1E-5
score: 24.7
coord: 4..26
e-value: 2.8E-6
score: 27.4
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 62..113
e-value: 1.9E-7
score: 33.2
coord: 4..55
e-value: 4.6E-11
score: 44.8
NoneNo IPR availablePANTHERPTHR24409:SF320AZ2-RELATEDcoord: 35..158
coord: 4..108
NoneNo IPR availablePANTHERPTHR24409ZINC FINGER PROTEIN 142coord: 35..158
coord: 4..108
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 41..98
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 4..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig63contigP-littoralis_Contig63:112449..112970 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig63.19.1mRNA_P-littoralis_Contig63.19.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig63 112404..113298 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig63.19.1 ID=prot_P-littoralis_Contig63.19.1|Name=mRNA_P-littoralis_Contig63.19.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=174bp
MSGFACDVCNKAFSTQQSLDQHTRSNPRSHEFKICDECHKTFSTQEALDQ
HTRSNPRSHFKICDKCDKSFSTQEALDQHTRSNPRSHIIVCDNCRRRFKT
LKEKKEHTDSRHMCKVCKDIFCDDIDMAQHQYDMHMNRCTHCGKIFDNKH
SAVAHIMANHLESTKVDGVDSRG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR022755Znf_C2H2_jaz
IPR036236Znf_C2H2_sf