prot_P-littoralis_Contig628.11.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig628.11.3
Unique Nameprot_P-littoralis_Contig628.11.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length214
Homology
BLAST of mRNA_P-littoralis_Contig628.11.3 vs. uniprot
Match: D7G8V9_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8V9_ECTSI)

HSP 1 Score: 290 bits (743), Expect = 3.010e-97
Identity = 139/150 (92.67%), Postives = 142/150 (94.67%), Query Frame = 0
Query:   63 FSKGPAERLNAYRESELKHGRTAMLAVVGFLTQENWHPLYNGGLSSNPVKAIFEVPPEGLLQIAMFIGFLEYVISQIVAKPGYIPGDYVGANDLFSEEGAHSQWDTYQTKELHNGRAAMMGIAGLVTHNLLTDGMPAFEQISRGVYTGGI 212
            FSKGPAERLNAYRE+ELKHGRTAMLAVVGFLTQENWHPLYNGGLSSNPVKAI EVPPEGL QI MFIGFLEYVISQIVAKPGYIPGDYVGANDLFSEEG HSQW+TYQ KELHNGRAAMMGI GLVTHN LT GMPAFEQISRGVY+GGI
Sbjct:   62 FSKGPAERLNAYREAELKHGRTAMLAVVGFLTQENWHPLYNGGLSSNPVKAITEVPPEGLFQIVMFIGFLEYVISQIVAKPGYIPGDYVGANDLFSEEGPHSQWETYQLKELHNGRAAMMGITGLVTHNFLTGGMPAFEQISRGVYSGGI 211          
BLAST of mRNA_P-littoralis_Contig628.11.3 vs. uniprot
Match: I2CPJ1_NANGC (Protein fucoxanthin chlorophyll a c protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPJ1_NANGC)

HSP 1 Score: 152 bits (384), Expect = 7.160e-43
Identity = 81/145 (55.86%), Postives = 102/145 (70.34%), Query Frame = 0
Query:   64 SKGPAERLNAYRESELKHGRTAMLAVVGFLTQENWHPLYNGGLSSNPVKAIFEVPPEGLLQIAMFIGFLEYVISQIVAKPGYIPGDYVGANDLF--SEEGAHSQWDTYQTKELHNGRAAMMGIAGLVTHNLLTDGMPAFEQISRG 206
            +K   + LN YRESELKHGR AMLAV+G++ QE WHPLY+G LSSNP+KA+ EVP  G  QI + I  +EY+ ++I   PGY PGDY+G  +    S+EG    WD YQTKEL+NGR AM+ IAGL+  +L+T G  A EQIS G
Sbjct:   59 AKADQKTLNKYRESELKHGRVAMLAVLGWVVQEVWHPLYDGKLSSNPLKALTEVPLIGWAQIFVAINVIEYLQNKIKELPGYRPGDYLGTWEWVEQSDEG----WDNYQTKELNNGRLAMVAIAGLIAQDLIT-GQAALEQISAG 198          
BLAST of mRNA_P-littoralis_Contig628.11.3 vs. uniprot
Match: A0A7S0XDX8_9STRA (Hypothetical protein n=2 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XDX8_9STRA)

HSP 1 Score: 129 bits (324), Expect = 4.590e-34
Identity = 76/142 (53.52%), Postives = 92/142 (64.79%), Query Frame = 0
Query:   63 FSKGPA-ERLNAYRESELKHGRTAMLAVVGFLTQENWHPLYNGGLSSNPVKAIFEVPPEGLLQIAMFIGFLEYVISQIVAKPGYIPGDYVGANDLFSEEGAHSQWDTYQTKELHNGRAAMMGIAGLVTHNLLTDGMPAFEQI 203
            FSKG + E L  YRESELKHGR AMLAV+G+LTQE +HP Y G LS NP+ A  EVPP G +QI  FIG LEY I  I  K  Y  GD++G   L   +   S+W + QT+EL+NGR AM  I G +TH  +T G  A EQ+
Sbjct:   53 FSKGVSDETLFKYRESELKHGRVAMLAVLGWLTQERFHPFYEGKLSGNPLVAFGEVPPLGFVQIIAFIGLLEY-IGTIQNK--YQSGDFLGIKPLIDNQD-DSRWVSIQTRELNNGRLAMFAILGEITHAAIT-GKGALEQL 189          
BLAST of mRNA_P-littoralis_Contig628.11.3 vs. uniprot
Match: A0A7S3IA89_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Favella ehrenbergii TaxID=182087 RepID=A0A7S3IA89_9SPIT)

HSP 1 Score: 122 bits (305), Expect = 2.310e-31
Identity = 60/121 (49.59%), Postives = 81/121 (66.94%), Query Frame = 0
Query:   74 YRESELKHGRTAMLAVVGFLTQENWHPLYNGGLSSNPVKAIFEVPPEGLLQIAMFIGFLEYVISQIVAKPGYIPGDYVGANDLFSEEGAHSQWDTYQTKELHNGRAAMMGIAGLVTHNLLT 194
            +RE+ELKHGR AMLA  G +T + +HPLY+G LSSNP+ AI +VP  GLLQI +FIGF+E        +P Y PGD++G++   + E     WD YQ +EL+NGR AM    G++TH  +T
Sbjct:   47 FREAELKHGRVAMLACAGMITADKFHPLYDGKLSSNPLLAIAQVPKLGLLQILLFIGFMEVFGILNSRRPDYKPGDFLGSSQWDTTE----VWDNYQLRELNNGRLAMFASIGMLTHAYIT 163          
BLAST of mRNA_P-littoralis_Contig628.11.3 vs. uniprot
Match: A0A7S4B2U4_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B2U4_CHRCT)

HSP 1 Score: 122 bits (306), Expect = 3.510e-31
Identity = 62/128 (48.44%), Postives = 82/128 (64.06%), Query Frame = 0
Query:   67 PAERLNAYRESELKHGRTAMLAVVGFLTQENWHPLYNGGLSSNPVKAIFEVPPEGLLQIAMFIGFLEYVISQIVAKPGYIPGDYVGANDLFSEEGAHSQWDTYQTKELHNGRAAMMGIAGLVTHNLLT 194
            PA+ L  YRE ELKHGR AMLA +G +  + WHPLY GG S+NP+ AI +VP  GLLQI  FIGF+E +    + +  Y PG+++G+    + E     WD YQT+EL+NGR AM    G++ H  LT
Sbjct:   76 PAD-LKKYRECELKHGRVAMLASMGMVVADFWHPLYGGGNSANPLVAITQVPKAGLLQILAFIGFMEVMGQLNMQRADYEPGNFLGSGQWETSE----SWDDYQTRELNNGRLAMFASIGMLAHAALT 198          
BLAST of mRNA_P-littoralis_Contig628.11.3 vs. uniprot
Match: A0A7S3TFW5_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3TFW5_EMIHU)

HSP 1 Score: 122 bits (306), Expect = 3.700e-31
Identity = 69/151 (45.70%), Postives = 92/151 (60.93%), Query Frame = 0
Query:   63 FSKGPA-ERLNAYRESELKHGRTAMLAVVGFLTQENWHPLYNGGLSSNPVKAIFEVPPEGLLQIAMFIGFLEYVISQIVAKPGYIPGDYVGANDLFSEEGAHSQWDTYQTKELHNGRAAMMGIAGLVTHNLLTDGMPAFEQISRGVYTGGI 212
            FSK  + E +  +RE+ELKHGR AMLA  G +T + +HPL+ G LSSNP+ AI +VP  GLLQI +FIGF+E        +P Y PG+++G     S+      WD YQ +EL+NGR AM G  G++TH  +T G    E +  G   GGI
Sbjct:   64 FSKDASPETMAKFREAELKHGRVAMLACAGMITADKFHPLFGGKLSSNPLLAITQVPKLGLLQILLFIGFMEVFGILNSRRPDYEPGNFLGT----SQWETTPTWDAYQLRELNNGRLAMFGAIGMLTHAYIT-GKGPLELLDAG--NGGI 207          
BLAST of mRNA_P-littoralis_Contig628.11.3 vs. uniprot
Match: Q2IA68_ISOGA (Chloroplast light harvesting protein isoform 11 n=1 Tax=Isochrysis galbana TaxID=37099 RepID=Q2IA68_ISOGA)

HSP 1 Score: 119 bits (297), Expect = 5.780e-30
Identity = 60/121 (49.59%), Postives = 82/121 (67.77%), Query Frame = 0
Query:   74 YRESELKHGRTAMLAVVGFLTQENWHPLYNGGLSSNPVKAIFEVPPEGLLQIAMFIGFLEYVISQIVAKPGYIPGDYVGANDLFSEEGAHSQWDTYQTKELHNGRAAMMGIAGLVTHNLLT 194
            +RE+ELKHGR AMLA  G +T + +HPLY+G LSSNP+ AI +VP  GLLQI +FIGF+E        +P Y PG+++G+     E GA   WD +Q +EL+NGR AM    G++TH+ +T
Sbjct:   65 FREAELKHGRVAMLASAGMITADKFHPLYDGKLSSNPLLAISQVPKLGLLQIVLFIGFMEVFGILNSRRPDYQPGNFLGSAQW--ETGA--SWDDFQVRELNNGRLAMFASIGMLTHSSIT 181          
BLAST of mRNA_P-littoralis_Contig628.11.3 vs. uniprot
Match: A0A7S3THI0_EMIHU (Hypothetical protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3THI0_EMIHU)

HSP 1 Score: 120 bits (301), Expect = 8.710e-30
Identity = 65/139 (46.76%), Postives = 86/139 (61.87%), Query Frame = 0
Query:   74 YRESELKHGRTAMLAVVGFLTQENWHPLYNGGLSSNPVKAIFEVPPEGLLQIAMFIGFLEYVISQIVAKPGYIPGDYVGANDLFSEEGAHSQWDTYQTKELHNGRAAMMGIAGLVTHNLLTDGMPAFEQISRGVYTGGI 212
            +RE+ELKHGR AMLA  G +T + +HPL+ G LSSNP+ AI +VP  GLLQI +FIGF+E        +P Y PG+++G     S+      WD YQ +EL+NGR AM G  G++TH  +T G    E +  G   GGI
Sbjct:  135 FREAELKHGRVAMLACAGMITADKFHPLFGGKLSSNPLLAITQVPKLGLLQILLFIGFMEVFGILNSRRPDYEPGNFLGT----SQWETTPTWDAYQLRELNNGRLAMFGAIGMLTHAYIT-GKGPLELLDAG--NGGI 266          
BLAST of mRNA_P-littoralis_Contig628.11.3 vs. uniprot
Match: A0A7S0E1K9_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0E1K9_9EUKA)

HSP 1 Score: 117 bits (293), Expect = 2.060e-29
Identity = 58/133 (43.61%), Postives = 86/133 (64.66%), Query Frame = 0
Query:   63 FSKGPA-ERLNAYRESELKHGRTAMLAVVGFLTQENWHPLYNGGLSSNPVKAIFEVPPEGLLQIAMFIGFLEYVISQIVAKPGYIPGDYVGANDLFSEEGAHSQWDTYQTKELHNGRAAMMGIAGLVTHNLLT 194
            FSK  + E +  YRE+ELKHGR AMLA  G +TQ+ WHPL++G LS+NP+ AI + P  G++QI +FI F+E +      +  Y PG+++G++   + E     W+ YQ KEL+NGR AM G  G++  + +T
Sbjct:   49 FSKDASPETMKKYREAELKHGRVAMLAAWGMITQDAWHPLFDGKLSANPLLAIIQTPKLGVIQILIFIAFIEVIGILNTRRADYEPGNFLGSSQWETGE----TWENYQLKELNNGRLAMFGSIGMLVGSYIT 177          
BLAST of mRNA_P-littoralis_Contig628.11.3 vs. uniprot
Match: A0A7S3AG67_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AG67_9EUKA)

HSP 1 Score: 117 bits (293), Expect = 3.130e-29
Identity = 63/145 (43.45%), Postives = 89/145 (61.38%), Query Frame = 0
Query:   63 FSKGPA-ERLNAYRESELKHGRTAMLAVVGFLTQENWHPLYNGGLSSNPVKAIFEVPPEGLLQIAMFIGFLEYVISQIVAKPGYIPGDYVGANDLFSEEGAHSQWDTYQTKELHNGRAAMMGIAGLVTHNLLTDGMPAFEQISRG 206
            FSK  + E +  +RE+ELKHGR AMLAV G +T + +HPL+ G  SSNP+ A+ +VP  G LQI  FI F+E +      +P Y PG+++G +    +    + WD+YQTKEL+NGR AM    G++TH  +T G    E +  G
Sbjct:   63 FSKDASPETMKKFREAELKHGRVAMLAVFGMITADKFHPLFGGQCSSNPLLALTQVPKLGWLQILTFIMFMEVIGILNSRRPDYEPGNFLGTSQWEMD----ATWDSYQTKELNNGRLAMFASIGMLTHAYIT-GKGPLELLDAG 202          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig628.11.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8V9_ECTSI3.010e-9792.67Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
I2CPJ1_NANGC7.160e-4355.86Protein fucoxanthin chlorophyll a c protein n=1 Ta... [more]
A0A7S0XDX8_9STRA4.590e-3453.52Hypothetical protein n=2 Tax=Chromulina nebulosa T... [more]
A0A7S3IA89_9SPIT2.310e-3149.59Hypothetical protein (Fragment) n=1 Tax=Favella eh... [more]
A0A7S4B2U4_CHRCT3.510e-3148.44Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S3TFW5_EMIHU3.700e-3145.70Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]
Q2IA68_ISOGA5.780e-3049.59Chloroplast light harvesting protein isoform 11 n=... [more]
A0A7S3THI0_EMIHU8.710e-3046.76Hypothetical protein n=2 Tax=Emiliania huxleyi Tax... [more]
A0A7S0E1K9_9EUKA2.060e-2943.61Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A7S3AG67_9EUKA3.130e-2943.45Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 50..191
e-value: 3.1E-30
score: 105.8
NoneNo IPR availableGENE3D1.10.3460.10Chlorophyll a/b binding protein domaincoord: 35..209
e-value: 2.0E-31
score: 111.4
NoneNo IPR availablePANTHERPTHR21649:SF89CHLOROPHYLL A-B BINDING PROTEIN 6, CHLOROPLASTICcoord: 24..202
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 37..202
IPR001344Chlorophyll A-B binding protein, plant and chromistaPANTHERPTHR21649CHLOROPHYLL A/B BINDING PROTEINcoord: 24..202

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig628contigP-littoralis_Contig628:52458..58546 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig628.11.3mRNA_P-littoralis_Contig628.11.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig628 51248..58577 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig628.11.3 ID=prot_P-littoralis_Contig628.11.3|Name=mRNA_P-littoralis_Contig628.11.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=214bp
MKSVIALSAVLASASAFVPSASFVGSRVAAVARPAASSTAVSMAATDMVG
ASAPLGFFDPMGFSKGPAERLNAYRESELKHGRTAMLAVVGFLTQENWHP
LYNGGLSSNPVKAIFEVPPEGLLQIAMFIGFLEYVISQIVAKPGYIPGDY
VGANDLFSEEGAHSQWDTYQTKELHNGRAAMMGIAGLVTHNLLTDGMPAF
EQISRGVYTGGIQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022796Chloroa_b-bind
IPR001344Chloro_AB-bd_pln