mRNA_P-littoralis_Contig625.9.4 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig625.9.4
Unique NamemRNA_P-littoralis_Contig625.9.4
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig625.9.4 vs. uniprot
Match: D7G6X2_ECTSI (Methyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6X2_ECTSI)

HSP 1 Score: 996 bits (2576), Expect = 0.000e+0
Identity = 548/745 (73.56%), Postives = 594/745 (79.73%), Query Frame = 2
Query:   83 LAVADAAFLFLAGATRIGEAFLFAGPRATSTPHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGQEGAAQPPPLPKDSTRRGTALDGTSLAFRPPTTEDMHKLRMGDWVAQRGIVVSLVALDGTGQETKAAGEVIVGAPLVGAVVESMDGVGGSSVATRVCLLRHRREDGVSEAVEHALLDETINQFLNDGARISQLRVEADDSPQSVEFYSRHGFVSATEASADGRLLLAGDRNAALTAIQGSLREGEGGGQGGVGAVVMNLMARLLHDAGNLQGAVDAYLKALEAWPPFQRCSLQTDPTRSEVFRGLGGAYQSLGQHQMAFASYQQAINLAPSDLLAYLKLGMLYEDLAVGKYEEAGDHAIRCFEYYLQHSGSEDTDVLTRLGNLQVLRLDPASAVETYRRALAVDNSLSNVWFNLANAHLKLGEEEEAARCLHEKLELDPDPRAGVSARYLLASIEADPGRLTKDDQLAYARELFEYYAPKYDDHMRKKLLYTGPRLLRQNMKEVYNATFLSFPEEIRSSHHGDVLSYLNGSLDILDLGCGTGLIGSWFKDYARKLVGVDVSPTMLDMATKKGCYHELRKGDLGAYLAASEEEQFDLVVAAETLQYLGPLDTVVLDTFKVLKHGGYFSFTVDRRXXXXXXXXXXXXXXXXXPGAAAVGELGYTLKTEGTYAYTRAYLEELARRSGFEVVILKRHSTTVERGEAAP 2317
            LA  D A L LAGA R GEAFLF+G R  STP R            X  XX                                                  QEGAAQPPP+PKD+TRR  ALDGT+LAFRPPTT+D HKL MGDWVAQ+G+ V+LVAL  T Q   AAGE ++GAPL GAVVE+M G  GSSVAT+VCLLRHRREDGV+EAVEHALLDETIN+FLNDGARISQLRVE DDSPQSV++YSRHGF+ + EA+++GR+LLAGDR AAL AIQ SL  G+   QG VGAVVMNLMARLLHDAGNLQGAVDAYLKALE            DPTRSEVFRGLGGAYQS GQHQMAFASYQQAINLAP DLLAYLKLGMLYEDLAVGKYEEAGDHAIRCF+YYLQHSGSEDTDVLTRLGNLQV+RLDP SAVETYRRALAVD SLSNVWFNLANA+LKLGEEEEAA CL EKL LDPDP AGVSARYLLAS+EADPGRLT+ DQLAYARELF+YYAPKYDDHMRKKLLYTGPRLLR+NMKEVYNATF SFP+EI+S+H+GDVLSYLNGSLDILDLGCGTGLIGSWFKDYARKLVGVD+SPTMLDMATKKGCYHELR+GD+ AYLAASEE+QFDLVVAAETLQYLGPL+TVV D  KVLK GGYFSFTVDRR        XXXXXXXXX       E GY+LKT+GTYAY+R YLE LAR  G+E+V+LKRHST V+RGEAAP
Sbjct:    6 LAGVDVALLLLAGAARSGEAFLFSGLRVPSTPRRQHDPSPSSNTQQXHAXXGGRLLPTTSRPPSTASTLRATPADDATGQQILEYPGMTDDQEGGAPEGR-QEGAAQPPPIPKDTTRRAVALDGTALAFRPPTTQDFHKLGMGDWVAQKGLAVALVALGATEQ---AAGEPVIGAPLAGAVVEAMGG--GSSVATQVCLLRHRREDGVAEAVEHALLDETINRFLNDGARISQLRVEIDDSPQSVDYYSRHGFIRSVEAASEGRVLLAGDRVAALGAIQASLTGGDD--QGTVGAVVMNLMARLLHDAGNLQGAVDAYLKALEL-----------DPTRSEVFRGLGGAYQSQGQHQMAFASYQQAINLAPWDLLAYLKLGMLYEDLAVGKYEEAGDHAIRCFQYYLQHSGSEDTDVLTRLGNLQVMRLDPGSAVETYRRALAVDKSLSNVWFNLANAYLKLGEEEEAATCLKEKLRLDPDPNAGVSARYLLASLEADPGRLTESDQLAYARELFDYYAPKYDDHMRKKLLYTGPRLLRKNMKEVYNATFQSFPDEIQSAHNGDVLSYLNGSLDILDLGCGTGLIGSWFKDYARKLVGVDISPTMLDMATKKGCYHELRRGDVRAYLAASEEQQFDLVVAAETLQYLGPLETVVADASKVLKPGGYFSFTVDRRRTNEGEEQXXXXXXXXXXDDP---EEGYSLKTDGTYAYSRGYLERLARLGGYEIVVLKRHSTMVQRGEAAP 728          
BLAST of mRNA_P-littoralis_Contig625.9.4 vs. uniprot
Match: A0A835Z5A7_9STRA (Methyltransf_11 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5A7_9STRA)

HSP 1 Score: 374 bits (959), Expect = 5.440e-115
Identity = 279/681 (40.97%), Postives = 352/681 (51.69%), Query Frame = 2
Query:  608 PLVGAVVESMDGVGGSSVATRVCLLRHRREDGVSEAVE-HALLDETINQFLNDGARISQLRVEADDSPQSVEFYSRHGFVSATEASADGRLLLAGDRNAALTAIQGSLREGEGGGQGGVGAVVMNLMARLLHDAGNLQGAVDAYLKALEAWPPFQRCSLQTDPTRSEVFRG--------------------------------------LGGAYQSLGQHQMAFASYQQAINLAPSDLLAYLKLGMLYEDLAV--GKYEEAGDHAIRCFEYYLQHSGSEDTDVLTRLGNLQVL---------RLDPASAVETYRRALA-----------------------------VDNSLSNVWFNLANAHLKLGEEEEAARCLHEKLELDPDPRAGVSARYLLASIEADPGRLTKDDQLAYARELFEYYAP--------KYDDHMRKKLLYTGPRLLRQNMKEVYNATFLSFPEEIRSSHHGDVLSYLNGSLDILDLGCGTGLIGSWFKDYARKLVGVDVSPTMLDMATKKGCYHELRKGDLGAYLAASEEEQFDLVVAAETLQYLGPLDTVVLDTFKVLKHGGYFSFTVDRRXXXXXXXXXXXXXXXXXPGAAAVGELGYTLKTEGTYAYTRAYLEELARRSGFEVVILKRHSTTVERGEAAP-----LHRSWSLRRRVDLSLVPSA 2374
            PL    +  +  +GGSS+AT    L+     G + A     LL E + +FLN GAR+SQLR  A D+          GF +   A+ADG  L A DR AAL A   +L            A   N+ ARLLHDAG++ GAVDAY+ A+           Q DPTR EVFR                                       +GGAYQSLGQHQMAFAS QQAI+L P+D +AYLKLGMLYE LA+  GKYE+A  HAI C+++YL  SG+EDTDVL R+GNLQ+L         RL P  A   Y RALA                              D +L+  W NLA+  L+L +   A                       L       G      +  +AREL+++YA         +YDDHMRKKLLYTGPRLLR  ++E  NATF + P + R+ H GDVL YLN SL +LDLGCGTGL GSW KDYA + VGVD+S  M+DMATKKGCY  L + D+  +LA + +E +DLVVAA++LQY+G L  V     +VL+ GG+F+ T       XXXXXXXXXXXXXX          + L+ EGT+A+   Y+   AR +  +VV L   ST +ERG   P     L R     RR   +  P+A
Sbjct:   19 PLAIVTLAPIPKLGGSSLATWTYGLQIATAPGAAAAAATQPLLVEALARFLNAGARVSQLRARAADAAALAPL----GF-ARDAAAADGWGLRA-DRGAALAAADAALAAAPRD------AARANVRARLLHDAGDVAGAVDAYMSAV-----------QIDPTRGEVFRRCAARGRFDAGGGNARAAGLLGRMHAPLKGAMPAGVATPMGGAYQSLGQHQMAFASLQQAISLDPADHVAYLKLGMLYEQLALSAGKYEDAMGHAILCYQHYLTGSGTEDTDVLVRMGNLQMLWLLPENAMRRLLPEDAAAPYERALAFCSTLLPRCCHMXXXXXXXXXXXXXXXXXADPALTPAWHNLASVRLRLRDTRGAVAAXXXXXXXXXXXXXXXXXXXSLTGGGEGGGGGDAVARREHARELYDFYADGEGLLWDVRYDDHMRKKLLYTGPRLLRAAIREAANATFAALPGDERAEHGGDVLRYLNASLAVLDLGCGTGLCGSWLKDYAAEAVGVDISQRMVDMATKKGCYTRLVRADMEEFLATAPDESYDLVVAADSLQYVGDLSAVFPQVARVLRPGGWFALTAPLLTAAXXXXXXXXXXXXXXXXXXXXXARSFRLRPEGTHAFALDYVRAQARAAALDVVKLDALSTRLERGAPLPGLLGVLRRPGEFERRSGAATAPAA 676          
BLAST of mRNA_P-littoralis_Contig625.9.4 vs. uniprot
Match: A0A7S3Y0T6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y0T6_HETAK)

HSP 1 Score: 337 bits (864), Expect = 1.750e-103
Identity = 203/476 (42.65%), Postives = 269/476 (56.51%), Query Frame = 2
Query:  965 AVVMNLMARLLHDAGNLQGAVDAYLKALEAWPP--FQRCSLQTDPTRSEVFRGLGGAYQSLGQHQMAFASYQQAINLAPSD--------------------LLAYLKLGMLYEDLAVGKYEEAGDHAIRCFEYYLQHSGSEDTDVLTRLGNLQVLRLDPASAVETYRRALAVDNSLSNVWFNLANAHLKLGEEEEAARCLHEKLELDPDPRAGVSARYLLASIEADPGR--LTKDDQLAYARELFEYYAPKYDDHMRKKLLYTGPRLLRQNMKEVYNATFLSFPEEIRSSHHGDVLSYLNGSLDILDLGCGTGLIGSWFKDYARKLVGVDVSPTMLDMATKKGCYHELRKGDLGAYLAAS-EEEQFDLVVAAETLQYLGPLDTVVLDTFKVLKHGGYFSFTVDRRXXXXXXXXXXXXXXXXXPGAAAVGELGYTLKTEGTYAYTRAYLEELARRSGFEVVILKRHSTTVERGEAAP 2317
            A   N++ RL H A +L GA  AY  ALEA PP   +     T   R+ +FR LG  Y S G  QMAFASYQQA+ +A  +                     L Y KLG+LYE LA GK+EEA  HA++CFE++L+ +GS DTDVLTRLGNLQ+  L    AV TY++ALA D  L+ VW NLA A +KLG +E+A   L     LD   RA    R+LLA++  D G   +T+ D  AY  ELF++Y+  Y+DH+RKKLLYT PR+LRQ ++++YNATF + PEE R+ ++ DVL  LN SL ILD GCG  L G+WF DY+R L GVD+SP M++ A  K  Y ++   D   +L    +   +DL+VAA+   Y+G L        + L  GG+ +FT +R                  P A      G+ L+    +AYT AYLE LA   G  V + +  + TVER E  P
Sbjct:    1 AAAGNVLGRLRHAAQDLPGAAAAYTAALEALPPPGEEGVDEATSAQRAALFRNLGSVYHSQGSEQMAFASYQQALAIAAPERAAAAAAESSPAEPLLLREAALTYFKLGLLYESLARGKFEEAAGHAVQCFEFFLEKTGSTDTDVLTRLGNLQIKTLQLEQAVATYQKALAADPQLAPVWANLATAQMKLGLKEDAIHSLERASALDGALRA---PRHLLAALRGDEGTAPITRADP-AYVAELFDFYSEFYEDHLRKKLLYTAPRILRQELRDMYNATFQALPEEERAFYNNDVLQQLNKSLTILDFGCGPALSGAWFLDYSRTLDGVDLSPRMVEKARGKNIYRDVFCADGPDFLNGQCDAGAYDLIVAADVFGYIGDLAETFQGAARALAPGGHLAFTAERATR---------------PAAG-----GFRLEENARFAYTPAYLEALAADHGLVVAVKREAALTVERNEPVP 452          
BLAST of mRNA_P-littoralis_Contig625.9.4 vs. uniprot
Match: I2CR32_NANGC (Tetratricopeptide repeat family protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=I2CR32_NANGC)

HSP 1 Score: 340 bits (873), Expect = 7.020e-102
Identity = 223/559 (39.89%), Postives = 311/559 (55.64%), Query Frame = 2
Query:  722 HALLDETINQFLNDGARISQLRV-EADDSPQSVEFYSRH----GF-------VSATEASADGRLLLAGDRNAALTAIQGSLREGEGGGQGGVGAVVMNLMARLLHDAGNLQGAVDAYLKALEAWPPFQRCSLQTDPTRSEVFRGLGGAYQSLGQHQMAFASYQQAINLAPSDLLAYLKLGMLYEDLAVGKYEEAGDHAIRCFEYYLQ-HSGSEDTDVLTRLGNLQVLRLDPASAVETYRRALAVDNSLSNVWFNLANAHLKLGEEEEAARCLHEKLELDPDPRAGVSARYLLASIEADPG------RLTKDDQLAYARELFEYYAPKYDDHMRKKLLYTGPRLLRQNMKEVYNATFLSFPEEIRSSHHGD---VLSYLNGSLDILDLGCGTGLIGSWFKDYARKLVGVDVSPTMLDMATKKGCYHELRKGDLGAYL----AASEEEQFDLVVAAETLQYLGPLDTVVLDTFKVLK-HGGYFSFTVDRRXXXXXXXXXXXXXXXXXPGAAAVGELGYTLKTEGTYAYTRAYLEELARRSGFEVVILKRHSTTVERGEAAP 2317
            H+L+   + +FLN G RI Q+ V +A    + +E         GF         A +    GR +L G     L  +Q   R+    G     A+++N++ RL HDA N + A D Y +AL         +LQ  P  S +F+ LG A+ S G+HQ+AFAS+Q+AI+L  +D   Y KLGM+YE LA GKY+EA +HA+ C+ +Y+    G EDTD LT  GNL V RL PA AVE Y+RALA++  L NVWFN+ANA+LK+GE+E+A   L + L L+P+  A   AR+LL SI    G          +   AY  ELF+YYAP YD HM++ LLYT PR+LRQ +++V N T  +       +  G    +L  LN S+ ILDLGCGTGL G+WF DYA ++VGVD+SP ML  A KK  Y E+ +GDL  ++    + S    +D++V+A+ LQYLG L+   L T  +L+   G F+FT++                    G AA    G+TL   G + +T+AY+E    ++   V     +S  VERGE  P
Sbjct:  181 HSLILGAMERFLNRGGRIGQVTVGDAGQEGRGLEPLQASATALGFRPIPPEGAPAKDKGQAGRPVLQGGLTDVLPELQALSRDTSASGS----ALLLNVLGRLEHDAQNFKAASDLYTQAL---------TLQ--PNSSTIFQNLGAAFASQGEHQLAFASFQRAIDLNSNDRYTYFKLGMMYEQLATGKYKEAAEHALSCYAFYVDGREGGEDTDALTIYGNLLVKRLCPAEAVEVYKRALALEAGLWNVWFNMANAYLKIGEKEDAITALQQTLSLNPNVSA---ARHLLLSITGAQGGGEGGAAAPVEADPAYVVELFDYYAPTYDQHMKEGLLYTAPRILRQEVRKVLNHTLFTEGAMGPVTPEGSGEALLRALNKSMRILDLGCGTGLCGAWFTDYASRMVGVDLSPKMLSQARKKLVYDEVHEGDLRNWVRQEASQSPPPTYDIIVSADVLQYLGSLEDTFLSTASLLEPRRGLFAFTLEELQADYGQAARDG-------GRAA---RGFTLGETGRFLHTKAYVERALAQADLVVETSISYSPRVERGEPVP 711          
BLAST of mRNA_P-littoralis_Contig625.9.4 vs. uniprot
Match: A0A7S2Y007_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y007_9STRA)

HSP 1 Score: 315 bits (807), Expect = 3.840e-95
Identity = 206/516 (39.92%), Postives = 271/516 (52.52%), Query Frame = 2
Query:  824 YSRHGFVSATEASADGRLLLAGDRNAALTAIQ--------------GSLREGEGGGQGGVGAVVMNLMARLLHDAGNLQGAVDAYLKALEAWPPFQRCSLQTDPTRSEVFRGLGGAYQSLGQHQMAFASYQQAINLAPSDLLAYLKLGMLYEDLAVGKYEEAGDHAIRCFEYYL--QHSGSE-DTDVLTRLGNLQVLRLDPASAVETYRRALAVDNSLSNVWFNLANAHLKLGEEEEAARCLHEKLELDPDPRAGVSARYLLASIEADPGRLTKDDQLAYARELFEYYAPKYDDHMRKKLLYTGPRLLRQNMKEVYNATFLSFPEEIRSSHHGDVLSYLNGSLDILDLGCGTGLIGSWFKDYARKLVGVDVSPTMLDMATKKGCYHELRKGDLGAYLA-ASEEEQFDLVVAAETLQYLGPLDTVVLDTFKVLKHGGYFSFTVDRRXXXXXXXXXXXXXXXXXPGAAAVGELGYTLKTEGTYAYTRAYLEELARRSGFEVVILKRHSTTVERGEAAP 2317
            Y  HGFV    A   G+ LL GD   A +  Q              G + EG+        A  +N + R+ H  G LQ A DAY KALE             P  S +F                            +D+L Y K+G+LYEDLAVGK+ E  DHAI+C +YYL  Q +G+  DTDVLTRLGNLQ+ +L    A+ TY +AL +D  L +VW NLA A LKLG++EEA   L + L L PD    +SA++LL  +  +P   T D +  Y  ELF+YY+  YDDHMR++LLY+ PR+LRQ +++ YN T  +      SS   DVL +LN SLDILDLGCGTGL G+WFKDYA+ LVGVD+S  M+  A  K  Y +L   D+  +L   +E   FDL++ A+ L YLG LD       +VL+ GG F+FTV+                          E GY L T   +A+TRAYL+++A+    E    K +S  VE GE  P
Sbjct:    1 YQAHGFVPLEGAG--GQALLQGDAEQAASKYQHIASRAEAAALEAEGEVHEGDARASA---ATALNTLGRVQHSLGMLQEASDAYTKALEF-----------SPESSTLFXXXXXXXXXXXXXXXXXXXXXXXXXXXHTDVLTYFKMGLLYEDLAVGKWSEGVDHAIKCLQYYLDNQPAGTRPDTDVLTRLGNLQLKQLHVEDAIVTYGKALDLDGQLHSVWHNLATAQLKLGQKEEAKESLEKVLALKPDL---LSAKHLLDCLTQNPDADTMDPK--YVTELFDYYSEFYDDHMRRQLLYSAPRILRQVVRDSYNETLQT------SSPGADVLQHLNSSLDILDLGCGTGLSGAWFKDYAKTLVGVDISEGMVAKAQSKMLYSDLHTMDIVDFLENKAEPGSFDLILGADVLGYLGNLDKAFAGAARVLRPGGKFAFTVEE--------------------FQGKSERGYDLNTSARFAFTRAYLDQMAKEHNLEAEKSKNYSQIVEMGEPVP 469          
BLAST of mRNA_P-littoralis_Contig625.9.4 vs. uniprot
Match: W7TV59_9STRA (Tetratricopeptide repeat family protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TV59_9STRA)

HSP 1 Score: 251 bits (641), Expect = 3.870e-70
Identity = 163/391 (41.69%), Postives = 223/391 (57.03%), Query Frame = 2
Query:  722 HALLDETINQFLNDGARISQLRV-EADDSPQSVEFYSRH----GF-------VSATEASADGRLLLAGDRNAALTAIQGSLREGEGGGQGGVGAVVMNLMARLLHDAGNLQGAVDAYLKALEAWPPFQRCSLQTDPTRSEVFRGLGGAYQSLGQHQMAFASYQQAINLAPSDLLAYLKLGMLYEDLAVGKYEEAGDHAIRCFEYYLQ-HSGSEDTDVLTRLGNLQVLRLDPASAVETYRRALAVDNSLSNVWFNLANAHLKLGEEEEAARCLHEKLELDPDPRAGVSARYLLASIEADPG------RLTKDDQLAYARELFEYYAPKYDDHMRKKLLYTGPRLLRQNMKEVYNATFLSFPEEIRSSHHGD---VLSYLNGSLDILDLGCGT 1828
            H+L+   + +FLN G RI Q+ V +A    + +E         GF         A +    GR +L G     L  +Q   R+    G     A+++N++ RL HDA N + A D Y +AL         +LQ  P  S +F+ LG A+ S G+HQ+AFAS+Q+AI+L  +D   Y KLGM+YE LA GKY+EA +HA+ C+ +Y+    G EDTD LT  GNL V RL PA AVE Y+RALA++  L NVWFN+ANA+LK+GE+E+A   L + L L+P+  A   AR+LL SI    G          +   AY  ELF+YYAP YD HM++ LLYT PR+LRQ +++V N T  +       +  G    +L  LN S+ ILDLGCGT
Sbjct:  181 HSLILGAMERFLNRGGRIGQVTVGDAGQEGRGLEPLQASATALGFRPIPPEGAPAKDKGQAGRPVLQGGLTDVLPELQALSRDTSASGS----ALLLNVLGRLEHDAQNFKAASDLYTQAL---------TLQ--PNSSTIFQNLGAAFASQGEHQLAFASFQRAIDLNANDRYTYFKLGMMYEQLATGKYKEAAEHALSCYAFYVDGREGGEDTDALTIYGNLLVKRLCPAEAVEVYKRALALEAGLWNVWFNMANAYLKIGEKEDAIIALQQTLSLNPNVSA---ARHLLLSITGAQGGGEGGAAAPVEADPAYVVELFDYYAPTYDQHMKEGLLYTAPRILRQEVRKVLNHTLFTEGAMGPVTPEGSGEALLRALNKSMRILDLGCGT 553          
BLAST of mRNA_P-littoralis_Contig625.9.4 vs. uniprot
Match: A0A2T7U3I9_9HYPH (SAM-dependent methyltransferase n=2 Tax=Microvirga sp. KLBC 81 TaxID=1862707 RepID=A0A2T7U3I9_9HYPH)

HSP 1 Score: 158 bits (400), Expect = 1.910e-39
Identity = 110/313 (35.14%), Postives = 151/313 (48.24%), Query Frame = 2
Query: 1379 SAVETYRRALAVDNSLSNVWFNLANAHLKLGEEEEAARCLHEKLELDPDPRAGVSARYLLASIEADPGRLTKDDQLAYARELFEYYAPKYDDHMRKKLLYTGPRLLRQNMKEVYNATFLSFPEEIRSSHHGDVLSYLNGSLDILDLGCGTGLIGSWFKDYARKLVGVDVSPTMLDMATKKGCYHELRKGDLGAYLAASEEEQFDLVVAAETLQYLGPLDTVVLDTFKVLKHGGYFSFTVDRRXXXXXXXXXXXXXXXXXPGAAAVGELGYTLKTEGTYAYTRAYLEELARRSGFEVVILKRHSTTVERGEAAP 2317
            +A +  R+ L +    +     L  A  KLG ++EAA+ L   LEL+P+   GV  R  LA + A P      D   Y R LF+ YAPK+D H+ K L Y GP L+   ++   +        +IR    G  L          DLGCGTGL+G         L GVD+SP ML+ A+K   YHEL +G+L ++L    + Q DLVVAA+   Y+  LD    +  +VLK GG F+FTV                       A  GE G+ L  +  YA++ +YL  LA  +GF  +IL R ST  +RG   P
Sbjct:   33 AAADLARQVLELAPRFAPAHALLGRAAAKLGLQDEAAQALRRALELEPEDVLGV--RLDLARLGALPPDEAMTD--GYVRALFDEYAPKFDRHLTKSLAYCGPELIADALRRACS-------RQIRDCRFGLTL----------DLGCGTGLMGQALDGLCEALAGVDLSPRMLEKASKTKLYHELHEGELVSFLKGRADAQADLVVAADVFVYMAALDDAFREAHRVLKRGGLFAFTVQ----------------------AHQGE-GFVLGADARYAHSESYLRRLAEENGFATLILDRVSTREDRGVPVP 301          
BLAST of mRNA_P-littoralis_Contig625.9.4 vs. uniprot
Match: A0A0H1RBJ8_9HYPH (Methyltransf_11 domain-containing protein n=1 Tax=Microvirga vignae TaxID=1225564 RepID=A0A0H1RBJ8_9HYPH)

HSP 1 Score: 151 bits (381), Expect = 6.910e-37
Identity = 110/318 (34.59%), Postives = 156/318 (49.06%), Query Frame = 2
Query: 1370 DPASAVETYRRALAVDNSLSNVWFNLANAHLKLGEEEEAARCLHEKLELDPDPRAGVSARYLLASIEADPGRLTKDDQL--AYARELFEYYAPKYDDHMRKKLLYTGPRLLRQNMKEVYNATFLSFPEEIRSSHHGDVLSYLNGSLDILDLGCGTGLIGSWFKDYARKLVGVDVSPTMLDMATKKGCYHELRKGDLGAYLAASEEEQFDLVVAAETLQYLGPLDTVVLDTFKVLKHGGYFSFTVDRRXXXXXXXXXXXXXXXXXPGAAAVGELGYTLKTEGTYAYTRAYLEELARRSGFEVVILKRHSTTVERGEAAP 2317
            D  +A +  R+ L +    +     L  A  +LG + EA   L   LEL+P+   GV  R  LA +    G L  D+ +  +Y R LF+ YAPK+D H+ K L Y GP L+   ++   +        +IR    G  LS        LDLGCGTGL+G      +  LVGVD+SP ML+ ATK   Y EL +G+L ++L    + +  LVVAA+   Y+  LD    +  +VLK  G+F+FTV                       A  GE G+ L  +  YA++ +YL ELA  +GF  +IL+R ST  +RG   P
Sbjct:   30 DFEAAADLARQVLELAPRFAPAHTLLGRAAAELGLQGEAVEALRRALELEPEDVLGV--RLDLARL----GALRPDEAMTDSYVRALFDEYAPKFDRHLTKSLAYRGPELIADALRRACS-------RQIRDYRFG--LS--------LDLGCGTGLMGQALDGVSASLVGVDLSPRMLEKATKTKLYDELHEGELVSFLKGRPDSEAGLVVAADVFVYMAELDDAFREAHRVLKREGFFAFTVQ----------------------AHEGE-GFVLGADARYAHSESYLRELADATGFATIILERVSTREDRGVPVP 301          
BLAST of mRNA_P-littoralis_Contig625.9.4 vs. uniprot
Match: UPI001EF518EA (methyltransferase domain-containing protein n=1 Tax=Microvirga sp. ACRRW TaxID=2918205 RepID=UPI001EF518EA)

HSP 1 Score: 146 bits (368), Expect = 3.810e-35
Identity = 104/313 (33.23%), Postives = 148/313 (47.28%), Query Frame = 2
Query: 1379 SAVETYRRALAVDNSLSNVWFNLANAHLKLGEEEEAARCLHEKLELDPDPRAGVSARYLLASIEADPGRLTKDDQLAYARELFEYYAPKYDDHMRKKLLYTGPRLLRQNMKEVYNATFLSFPEEIRSSHHGDVLSYLNGSLDILDLGCGTGLIGSWFKDYARKLVGVDVSPTMLDMATKKGCYHELRKGDLGAYLAASEEEQFDLVVAAETLQYLGPLDTVVLDTFKVLKHGGYFSFTVDRRXXXXXXXXXXXXXXXXXPGAAAVGELGYTLKTEGTYAYTRAYLEELARRSGFEVVILKRHSTTVERGEAAP 2317
            +A +  R+ L +  + +     L  +  +LG  +EA + L   L L+P+   GV  R  L  + A P      D   Y R LF+ YAPK+D H+ K L Y GP L+                + +R +   D   Y  G    LDLGCGTGL+G   +     LVGVD+SP MLD A K   Y EL +G+L ++L    E + DLVVAA+   Y+  LD    +  +VLK  G F+FTV                       A  GE G+ L ++  YA+  +YL +LA  +GF  ++ +R ST  +RG   P
Sbjct:   33 AAADLARQVLELTPNFAPAQAMLGRSAAELGIHDEAVQALTRALALEPEDALGV--RLDLVRLGALPAEEAMTD--TYVRALFDEYAPKFDQHLTKSLAYRGPELIA---------------DALRRACSKDTRDYRFGLA--LDLGCGTGLMGQVLEGLCEALVGVDLSPRMLDKAEKTKLYDELHEGELISFLKTRGEAEADLVVAADVFVYMAALDETFREAHRVLKRKGLFAFTVQ----------------------AHEGE-GFALGSDARYAHGASYLGKLAEDNGFAAIVFERVSTREDRGVPVP 301          
BLAST of mRNA_P-littoralis_Contig625.9.4 vs. uniprot
Match: W9H1T8_9PROT (Type 12 methyltransferase n=1 Tax=Skermanella stibiiresistens SB22 TaxID=1385369 RepID=W9H1T8_9PROT)

HSP 1 Score: 144 bits (362), Expect = 1.800e-34
Identity = 103/332 (31.02%), Postives = 159/332 (47.89%), Query Frame = 2
Query: 1322 DTDVLTRLGNLQVLRLDPASAVETYRRALAVDNSLSNVWFNLANAHLKLGEEEEAARCLHEKLELDPDPRAGVSARYLLASIEADPGRLTKDDQLAYARELFEYYAPKYDDHMRKKLLYTGPRLLRQNMKEVYNATFLSFPEEIRSSHHGDVLSYLNGSLDILDLGCGTGLIGSWFKDYARKLVGVDVSPTMLDMATKKGCYHELRKGDLGAYLAASEEEQFDLVVAAETLQYLGPLDTVVLDTFKVLKHGGYFSFTVDRRXXXXXXXXXXXXXXXXXPGAAAVGELGYTLKTEGTYAYTRAYLEELARRSGFEVVILKRHSTTVERGEAAP 2317
            D D    L    V+  DP +AVET +  L      +   F L  A L LGE ++A       L+ DPD R GV+   L+AS+E D    T+    AY R LF+ YA ++D+ +  +L Y  P+ LR  + ++  A                        LD+LD+GCGTGL G  F+  A +L G D++P M++ A ++G Y +L+ G+L A LA  E   +DLV+AA+ L Y+G L  V++     LK GG F  + +R                        G+ G+ L     +A++ AYL  +A  +G E+++++      E+G+  P
Sbjct:    5 DPDTAVELAEALVVSGDPLAAVETLQPILRRLPDYAAGVFTLGKAWLDLGERDKALGAWRRCLDADPDDRRGVAV--LIASVEGDT---TETMSQAYVRALFDRYAERFDEDLTIRLKYQAPQTLRAMVDQLLGADA--------------------AGLDVLDVGCGTGLAGVAFRSMAGRLHGSDLAPRMVEKARRRGVYDDLQVGELTAVLAR-EAHAWDLVIAADVLVYVGELGPVMIAAAAALKPGGLFCASTER----------------------CDGD-GFALGPSRRFAHSPAYLRRMAVEAGLEIIVMEDAVPRWEKGQPVP 287          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig625.9.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6X2_ECTSI0.000e+073.56Methyltransferase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A835Z5A7_9STRA5.440e-11540.97Methyltransf_11 domain-containing protein n=1 Tax=... [more]
A0A7S3Y0T6_HETAK1.750e-10342.65Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
I2CR32_NANGC7.020e-10239.89Tetratricopeptide repeat family protein n=2 Tax=Mo... [more]
A0A7S2Y007_9STRA3.840e-9539.92Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
W7TV59_9STRA3.870e-7041.69Tetratricopeptide repeat family protein n=1 Tax=Na... [more]
A0A2T7U3I9_9HYPH1.910e-3935.14SAM-dependent methyltransferase n=2 Tax=Microvirga... [more]
A0A0H1RBJ8_9HYPH6.910e-3734.59Methyltransf_11 domain-containing protein n=1 Tax=... [more]
UPI001EF518EA3.810e-3533.23methyltransferase domain-containing protein n=1 Ta... [more]
W9H1T8_9PROT1.800e-3431.02Type 12 methyltransferase n=1 Tax=Skermanella stib... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig625contigP-littoralis_Contig625:11673..20967 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7G6X2
PFAMsGlyco_transf_41,Methyltransf_11,TPR_11,TPR_16,TPR_2,TPR_8
Model size2473
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal peptide
Exons11
Evalue0.0
EggNOG OGsCOG3914@1|root,KOG4626@2759|Eukaryota
Ec32 ortholog descriptionMethyltransferase
Ec32 orthologEc-01_011920.1
Descriptionprotein N-acetylglucosaminyltransferase activity
Cds size2403
COG categoryO
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig625.9.4prot_P-littoralis_Contig625.9.4Pylaiella littoralis U1_48polypeptideP-littoralis_Contig625 11673..20897 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791303.6832871-CDS-P-littoralis_Contig625:11672..118281680791303.6832871-CDS-P-littoralis_Contig625:11672..11828Pylaiella littoralis U1_48CDSP-littoralis_Contig625 11673..11828 -
1680791303.705231-CDS-P-littoralis_Contig625:14150..143091680791303.705231-CDS-P-littoralis_Contig625:14150..14309Pylaiella littoralis U1_48CDSP-littoralis_Contig625 14151..14309 -
1680791303.718889-CDS-P-littoralis_Contig625:14738..149511680791303.718889-CDS-P-littoralis_Contig625:14738..14951Pylaiella littoralis U1_48CDSP-littoralis_Contig625 14739..14951 -
1680791303.7314258-CDS-P-littoralis_Contig625:15291..155341680791303.7314258-CDS-P-littoralis_Contig625:15291..15534Pylaiella littoralis U1_48CDSP-littoralis_Contig625 15292..15534 -
1680791303.7466218-CDS-P-littoralis_Contig625:16092..161911680791303.7466218-CDS-P-littoralis_Contig625:16092..16191Pylaiella littoralis U1_48CDSP-littoralis_Contig625 16093..16191 -
1680791303.7577758-CDS-P-littoralis_Contig625:16697..168061680791303.7577758-CDS-P-littoralis_Contig625:16697..16806Pylaiella littoralis U1_48CDSP-littoralis_Contig625 16698..16806 -
1680791303.7714894-CDS-P-littoralis_Contig625:17323..174601680791303.7714894-CDS-P-littoralis_Contig625:17323..17460Pylaiella littoralis U1_48CDSP-littoralis_Contig625 17324..17460 -
1680791303.786363-CDS-P-littoralis_Contig625:17788..179021680791303.786363-CDS-P-littoralis_Contig625:17788..17902Pylaiella littoralis U1_48CDSP-littoralis_Contig625 17789..17902 -
1680791303.8003323-CDS-P-littoralis_Contig625:18179..183671680791303.8003323-CDS-P-littoralis_Contig625:18179..18367Pylaiella littoralis U1_48CDSP-littoralis_Contig625 18180..18367 -
1680791303.8141365-CDS-P-littoralis_Contig625:18761..190351680791303.8141365-CDS-P-littoralis_Contig625:18761..19035Pylaiella littoralis U1_48CDSP-littoralis_Contig625 18762..19035 -
1680791303.8264778-CDS-P-littoralis_Contig625:20186..208971680791303.8264778-CDS-P-littoralis_Contig625:20186..20897Pylaiella littoralis U1_48CDSP-littoralis_Contig625 20187..20897 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791303.843857-UTR-P-littoralis_Contig625:20897..209671680791303.843857-UTR-P-littoralis_Contig625:20897..20967Pylaiella littoralis U1_48UTRP-littoralis_Contig625 20898..20967 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig625.9.4

>prot_P-littoralis_Contig625.9.4 ID=prot_P-littoralis_Contig625.9.4|Name=mRNA_P-littoralis_Contig625.9.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=801bp
MLNALAVADAAFLFLAGATRIGEAFLFAGPRATSTPHRHQHDPHSAAAVA
VTTTAVVLSQARPRTTITALRMTPAKSSTKRQPQSSPDPQAIDEEEGTST
STSEGQEGAAQPPPLPKDSTRRGTALDGTSLAFRPPTTEDMHKLRMGDWV
AQRGIVVSLVALDGTGQETKAAGEVIVGAPLVGAVVESMDGVGGSSVATR
VCLLRHRREDGVSEAVEHALLDETINQFLNDGARISQLRVEADDSPQSVE
FYSRHGFVSATEASADGRLLLAGDRNAALTAIQGSLREGEGGGQGGVGAV
VMNLMARLLHDAGNLQGAVDAYLKALEAWPPFQRCSLQTDPTRSEVFRGL
GGAYQSLGQHQMAFASYQQAINLAPSDLLAYLKLGMLYEDLAVGKYEEAG
DHAIRCFEYYLQHSGSEDTDVLTRLGNLQVLRLDPASAVETYRRALAVDN
SLSNVWFNLANAHLKLGEEEEAARCLHEKLELDPDPRAGVSARYLLASIE
ADPGRLTKDDQLAYARELFEYYAPKYDDHMRKKLLYTGPRLLRQNMKEVY
NATFLSFPEEIRSSHHGDVLSYLNGSLDILDLGCGTGLIGSWFKDYARKL
VGVDVSPTMLDMATKKGCYHELRKGDLGAYLAASEEEQFDLVVAAETLQY
LGPLDTVVLDTFKVLKHGGYFSFTVDRRRTEEEEDDDEDEEKREEPGAAA
VGELGYTLKTEGTYAYTRAYLEELARRSGFEVVILKRHSTTVERGEAAPL
HRSWSLRRRVDLSLVPSAALPVSSLSWSVSVNSASAWYARCSARSPSKST
S
back to top

mRNA from alignment at P-littoralis_Contig625:11673..20967-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig625.9.4 ID=mRNA_P-littoralis_Contig625.9.4|Name=mRNA_P-littoralis_Contig625.9.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=9295bp|location=Sequence derived from alignment at P-littoralis_Contig625:11673..20967- (Pylaiella littoralis U1_48)
TGTCACCGCAGCAAACCTAGAAGATAAACATAGGTAGTCAGGCCGGTTCA GGCAGGCAGAGCTTGCTGCGATGCTGAACGCTTTGGCCGTAGCCGATGCG GCTTTCCTGTTCCTTGCTGGTGCAACCAGGATTGGAGAAGCCTTCTTATT TGCAGGCCCAAGGGCCACCTCAACTCCGCACCGTCATCAACATGATCCTC ATTCAGCAGCAGCAGTAGCAGTCACCACCACGGCGGTGGTGCTCTCGCAA GCCAGACCGCGCACCACCATCACTGCTCTGCGCATGACTCCCGCTAAATC TTCAACTAAGCGTCAGCCCCAGTCATCCCCTGATCCTCAAGCCATCGACG AAGAGGAGGGCACCAGCACGAGCACCTCCGAGGGCCAAGAAGGTGCGGCC CAACCACCGCCGCTCCCGAAGGACAGCACTCGGAGAGGGACCGCACTCGA CGGGACTTCTCTCGCTTTCCGACCCCCAACAACGGAAGACATGCATAAAT TACGCATGGGTGATTGGGTAGCCCAAAGAGGGATTGTTGTCTCACTGGTA GCGCTTGATGGTACGGGGCAAGAGACTAAGGCAGCCGGGGAGGTGATCGT GGGTGCTCCTCTGGTTGGAGCGGTGGTGGAGTCCATGGACGGGGTGGGAG GGTCTTCTGTGGCGACAAGGGTGTGCTTGTTGAGGCATCGGCGTGAGGAT GGCGTGTCGGAGGCCGTGGAGCACGCCCTGCTGGACGAGACGATCAATCA GTTCCTCAACGACGGAGCAAGAATCAGCCAGGTCACGTGTGTGTAGTGTA AGTGGTAGGTTTATGTGTGTATCATACGTCGCGCGTGTGCCATGTCGTTG GCGTTCTGGCGTTCTGGCGATCTTGACGAATACCAACGTGCACATCATCA TGACATGTGTACCTGATACTCTGTATGCGTCATGCATGATAGAATTATAC GTCGGGAGGGCGGGGGCGGCTACACGTGAGTATGTTGGCAAATCATACGC ACATATCTTGGTTCTCACAGGATAATCGCGATATTTTTTTTTATTCACTC AAAATATAATACTGTAATGGAATCACAACACAGCGTTCTGCCGTATGGCA CTCTGAGCAATTCTTCAACACCTCCTGGTAGAGTCGCGATCCCAAAATCG GCAGACCTGCAAGAGGACGACTAGTCTGTTTCTCACAGCGTGGAGAAGTA CCGGCGTTGTCGTTGGCCTGTGGCACTTGGGCCACAGCACCAAAGTTCGT GTGGTGTGGTTCCAGGCTCCAGCCAATAGTAAATCCCGCAGCAGTTATGC GGCGCGAAAATGCACGAACACTGCACCCTTTCTGCAGCTGGTGGTACTGC TGTAGGCGGTTTTCGTCCGTGTTGGACCATATTATCAAACAATAAGTTAC TGCTGTAATACTGATATCGAAATCGGCAACCCTCCAAGCCCATCTCTCCT AGCGACTGCCCGCATTGCAAGAGTACGGCAATGTTTGGTTCAGGTTTGCA CTAGAGCCGGTGATGTAAAGATGCCCCTATAGCCTCGCGGTGCAACCGCC TCGAGGTTGACGTTGCCTCGCGACTCCGCACCACCAGCTCAACGAATGTC AACCCTACCGTCAATATAAGCGCCCACAAACCACTGTCAGGCCAAGGTAA TACCCTTTTTCTACCCCACTGCTGTTTCCGCTCCGCTTCCTGCTCTCGGT GCAGAGCTTTGTGGTGGTGTGTATGCTGGCCTCTCGCGACGAGTGGCGGG TTTCAGGGGGGGGGGCTGAAAAATGGTACTTTCCCGCAAGACAAGCACCG CCTTCGAATTTGATGACTTTATTTTTTCATTTTCTATGGGGACCAACACA TGTGTACGTCTCCGGCAGTGTGCCAAATACTGCTGTGTGCACACATTATG CCAACGCGCCTCGCTTGTTCTGTGCTTTCCAGTTGCGGGTGGAAGCGGAT GATTCACCGCAATCCGTCGAGTTCTACTCTCGCCACGGATTCGTCAGCGC CACCGAAGCATCAGCCGATGGGCGCTTGTTGCTAGCCGGAGATCGCAATG CAGCGTTGACTGCGATACAGGGGTCGCTCCGGGAGGGAGAGGGGGGGGGG CAGGGCGGTGTTGGCGCTGTTGTGATGAACCTCATGGCGCGGCTGCTCCA CGATGCGGGAAACCTCCAGGGCGCTGTGGATGCCTACCTGAAGGCACTGG AGGCATGTGAAACGGCTAAAGCCATCCAGACACCTTGTGCAGTAATCTAG GCATCAAGTGTCGTACTGTAGGCTGGTTGGTGTCAGTATTTGCCGCTAAG TCCTTGATCCGTTCATTGTGGTCTACATGTGTTGAAGGTGAACGGAATGA GTTTGCTCGTGCTTTGCTGAAAACCGGACCCGTTTGTAACGTTGGCCAAT GGTAGCCCAAGTCGCGTCGTTGTTGACTTTCTGCGTGCGCAGTGCGAGTA CACCCTCTTCGTGATCTACCCCCCCCCCCCCCCTCAACTACCAGCTGGAA GTATCGGTCGGCGTTTTTCTTCAAGAGAAGCGAACCACATGCTTAGTTTA CAGGGCGACGATTGTGATAAGAGCAGGTACGTATTTCTAGTTTCACGCAG GGCCACCCTTTCAACGTTGCTCGCTGCAGACGGACCCAACCCGCAGCGAA GTCTTCCGCGGCCTAGGGGGCGCTTACCAGAGCCTGGGGCAGCACCAGAT GGCTTTCGCGAGCTACCAGCAGGCGATCAACCTCGCCCCCTCGGACCTCC TAGCCTACCTCAAACTCGGGATGCTATACGAAGATCTGGTGAGAGAAAAC GAGAGAAATTTCGTCGGTCGCCTGTCTTCAGAAGTAGGCATGGGTCGGCC AGGAGCGCTCAGGACTAGTATCGGACTCACATATATTCGCCTGGAGTGCT TCATCTCACTACCGCTGCCGTGTACGAAAGCTTGGTTTGGTGCCGTCGCA AGAGCAACACTGGGCCGCCGTTCTTGGGCAAAGTATCATAGGTGCAAGAT TTCAAGAGAATCGTTTTGTGCCATGGTTCTTCGCTGACGTGAGGCCACCT TTTCCTGGTGTCCAGGCCGTGGGAAAGTACGAAGAAGCCGGGGACCATGC CATCCGATGCTTCGAGTACTATCTGCAGCACTCGGGGAGCGAAGACACGG ATGTGCTTACGAGGCTGGGAAATCTTCAGGTATCATGCGCATGCTGCTTC CGCCGTGCGTAAACCTACATGCGGATGCTTACCAGCCTCTGCCGTCGGAC TACCGCCGGACTGCTATCGGATGCCCCACCCTTTTTTCGTGCTATCCCTT CGTTTCTTTACATGCACCCGCGTGCATGTTTATTGTACAGGCGTGGCCTC AATTACACCATACGCGAACACTGCATTCAATATGCAGACAGGAAAAGCTT CAACTTGAGCGTCGCCAATTTCACGCGCCCTGTCCGCAGAATAAAGCATC TGCCCCCCCCCCCGTCCCCCTGTTCACGCCGTTTGATTTGTTGGACACCG ATTGGAGGTGTTGAGACTCGACCCAGCCTCTGCGGTGGAGACGTACAGGA GGGCCTTGGCGGTGGACAACTCCCTTTCCAACGTCTGGTTTAACCTTGCG AATGCCCACCTCAAGCTGGGGGAGGAAGAGGAGGCGGCAAGATGGTCGGT AGCGTTTTCTACTGAACACATTTCGTACCAATGCGGCTGTAGTGAAGATA CCTGAGGCGGACAACCCACCGGTGGTCTCTTCACGATAGAACCTTCGGGC CCAGGGTGGCGGGTGGTTAAGTACACAACATATGCGTCTACTGTTATCCC GGCTCTTCCGTTTTCCTTCCTCAACCCAGCCATGAGCCGAAAACATTGCT GCAATAGAATCGAGGGCGCTTTTGATGTGTGTTTTAGCATCCGCGTGAAG CCGTGTGTGGTCCCATGGCCACGTCCCCAATGTCTCACGAAGGCGCCGAT TGGACAGCCCACTTCCCACGTTGCCATCGGTCATGACGTTTGTGTTTGGT ATGACGGACTCGACTCTCACGAATAAAATTGAAGTGTGGTCGGTGCAGTC CTGAACACACATTACTGGCAGCATCAATTCCCCCGATTTTGACTCTGCAC CCTTGACACAACAGCCATACCAACAATTCTCGCTCGTTTTGACTCCTCAC CCTTGAGAAAGTCTACACGAGAAGCTCGAGCTAGACCCCGACCCAAGAGC CGGAGTATCTGCCAGGTACCTGCTGGCTTCGATCGAGGCGGACCCGGGGC GACTTACGAAGGACGATCAGGTGTGACAGTGGGAGCACCAGCGACAGGGT GGTGTTGGCGTGACACTGCTACAAACGTCGCTGTTTCTTTGCCAAGCGAG GAGCCTGCCTTTTGTAATCCGGCATGCGACACGTGTGCGGTGAACGGCGG GGATGGGGCTGGGGGAGGGTATTGCTACTTTTGTGAGTACCGCCTACTGT ATGCTGCTGTGCTTTCGGCCTTGCCGCCCTCGAGTTTCCCCGGAGGCTTG CGTGAATTTGCGACTTCTCCCTGTCAATGCTTTTGTGGGCCATCTGATCG GATGCCGCAAGCGTATCTCTACTGCTGTTTGTTCTGGTGGCGGCCACTTC TTCATGACATAAAGTCGTGTCAGCTGTGTTACACACACTAGAAACTTTGG GGTGGTGTACTTGCACTGGTACGTTGCTTCTGCGCTCTCTCCCTCTGATC GTATCTCGGCCTATCCCCACCCACTTGTGCCGTGCGTTGGTCCCATCGAC CGATGTTGTGACAATGTGCGTTGCAGCTAGCTTACGCGAGAGAGCTGTTC GAGTACTACGCTCCAAAGTACGACGATCACATGCGGAAGAAGCTCCTGTA CACCGGGCCTAGGCTGCTCCGACAAGTAAGGATGTCGAGGTGTATGATAT GAGCCAGCACTTTGGCGATTCAATATTTGGTAATTTGTGTTCTTCGTCCA ACGCAGCTGTAGTTCCGTCAACCCTTACAAGCATGGCGCATACGGGTCCA ATCCAGCGTGTGCGGTGACGTCATGTCGACGACGGTGCCCATGCTTTTGA TTTCAAAGCAGGCAATAAAATCGCGTGTAACTTCTGTGTAAGCTCCAGTG ATGGCCAGCTAGGTGATCAGCAAAATGTGTACGTTAGTTTTTATCGCCGT CTGTTTAACTGCACGTTTTGGCGTCTTCCGTAGTAGCCGCAGCGTGATCT ACGGTTCCTTCCCGGCCGATGACAGCTACAGGCTGGGGTCACCCGAGGGA GAGAAAAGCATCGATTCGTTTATTCTTGGCTTGGATCGGGGGGCCACGCA ATAGGGGCAGGCATTGTTTTGAGACATACCGCTCGTCTGCGGTACTGTAC CGCCGCCGTTGTTCCGCTGGCAATGTAACGACGTTTTTTCGTTCCAATGC TCTCCCTCTCCCCGTCGGCTTTCGGCTCTTTAGAACATGAAAGAGGTCTA CAACGCCACCTTTCTGTCTTTCCCGGAAGAGATTCGGTCCAGCCACCATG GTGACGTGCTCTCCTATCTCAACGGATCTCTCGACATCCTCGACCTCGGC TGCGGGACCGGGCTTATTGGCAGCTGGTTCAAGGACTACGCCAGGAAGCT GGTCGGGGTGGACGTGTCGCCAACCATGCTAGACATGGCCACCAAGAAAG GATGCTACCACGAGCTGCGAAAGGGGGTGAGCACGCCGTGACAACCATCA CCCCTGTCACACCACGAAGGGCATCCTATCTTGCCACATATGATACAAGG TTCACACGAGTGTATTGGTGCGGTGCTGTACCTCTACGTTTGTGCCAGGT TTCTCGTATTGCGGAGTCTAATCACATGCCCCCTATTGATTCGAGAGGCA ACAATACCGATAGGGTGTTTTCATGTACTCGTCGAAGTAAAATATTTCGG TTCGGCCTTGTTTCATATTATGATCGCGGCACTGGTGACTCCGCTTCTCA GTTTCCAGCATCTACCCCCTCCCCCTCCCCCTCCTCTCTCGTCGCCGTCG TTTTCACACGGTTCAGGACTTGGGAGCATACCTAGCCGCGTCGGAGGAGG AACAGTTCGACCTCGTCGTCGCAGCCGAGACGCTGCAATACCTAGGCCCG CTGGACACGGTCGTGTTGGACACCTTCAAGGTCTTGAAGCACGGGGGGTA TTTTTCGTTCACTGTGGACAGACGAAGAACAGAGGAGGAGGAGGACGATG ACGAGGATGAGGAAAAAAGAGAAGAGCCGGTGAGTGGGCGCGAGGTGGTG GTCGCGAGGGAGGGAGTAGGGTTTGGTTGAGGCAGAGCAGTTGAATACGG GACGCAGTCGGTGGCTGATGGCTGCTGTGCGATCAAGGGCTGGTTTTGGT TTAGGCGAGAGAATAATCCAGGAGTTAAAGTACTTCACGAAAAAGCCTCC CTCGAGGCAGGTAATTGCCGCGTAGATTGCCACTTGCTTCCAGTTGTTGG CAGCAAGTGAGGTAGTCGCTCGTCGCTGAACTCCAACTTCGCACCCTCCG GATCTAACGGTGCGGCTGTCCTACAAGCGTTTGTTTCACCGGCTAAACTG CCATTGCGGCATTGCTGTAACCTTTGACGCGTGTCTCCTGGAGCTGCTAC CGGGTACTATTTACATTCTCACCGGTGCCGCGTCCTCTGCACTCCGTACT GCACCCAGGGAGCTGCGGCCGTGGGGGAACTCGGATACACCTTGAAGACG GAAGGTACCTACGCGTATACCAGAGCTTACCTCGAAGAGTTAGCGCGGCG AAGCGGTTTCGAAGTTGTAATTTTGAAGCGACACTCCACCACGGTGGAAA GAGGAGAAGCCGCCCCTGGGTACATGGGCGTGTTTAGAAAGCCGGTTTTA GAGGGTTGAGGGAGGCATCTTGGTCTCGTGGAGGACTCATTTTTTTCGAG CTGGAGAATCTACTGGAGGGCGAACGAGAAAGTCACTTGCGTAGTACCGT CTTCCAATTTTAAGCGGCATGGGGGTTATTTCGAGCAAAACACCCGCAAA AAGGTGCGGAAGACAAATGGTATCGCACGATCGATGGCGAGTCACGTTGC AGGGGGGAAGATGGAGACGCGGAAAATCACCTGTGAACAGTTAGCTCTCC AATACACAGCAATGAGTTTTGCTAGGCCCGTGTGGCGCCATGTGGGTTGT GGGGAAGAGCGTCATCGGGGTACTGACGACCGTGCCCCGAGATGGAAACA TCGATCGAAAAATCACAATTGCTGCTGAGGAGCGCCAAGTTCTCTGTGAA ACCCGGCACACTTGCACACTCTGTTGCTTTTACAAGGAATCATTCTGAGT GGGCATCTCCACCGCGTTCAGGGCTACTGTACACGTCATTCGTCCCCCCT CAGATTTGCCCAACACCTTCTCTGCCTGCCATGACGGCAAGTTGAGTAGC GACCGGCACGTGAACGTAACATCAAGCACGGCGCGTGACAGCAGTGTGGA CCACACAGCAGTGCGAATGGAAAAGAAGGCACTCGCGAGATCGGAATGTC GCCGTGCCCGCGTAAGCGAAATACACGTCCTGTTATCCACCGTCACCAAC ACATGTGTCTCGAGGGAAAACGACTACTTATGAAATCCATGCCCCGGGAT TTGACGCTGACGAGCACCATCTCTGGCCCGCAAACGTGATGATAAGAGGG TGGGGACTCAGACAACGCATGTGATGGACGATGGGTCGCATGCATGACCA GATAGACGGACTGAGCCCATCTTCTTTGGAGGGTCTTCAGGCCAAAACGC GCTGTCAAAGAGACAACGCATCGAGAGAGGTCGAGGAAAATGAACGCGCG GCAAAACGGGAGCACCCGAGGCGAAAACGGGAGCACCCGAGGCGAAAACG GTTGATTTTTATCGTTGATTCTCAAATACAGCTCGTCGCAAAAATTCAGC CAGTGGTCACAAGCTTGGCACGAGAACAACCCGTGTGTCACGAACCAACT CCAGGACTCGCACATTTATCGAGGATCTCCGTGGAGACCCCCTTGTAACA CAACACCATCACTTGAGACTTCCAGCCCGAAAGAGACCAACATACCTATG GTACAGGCAGAAGAATTTTTCCAAAGGGGGTACCGGTTTTTTCTCCGTCA TTTTTGGGAGTTGACAGGTGAAACAAACTTTTCCAGAATCGCGCGGCCGA GAGGAACTCAAAACCGGTCTTAAAAAAAAATTCCATGAACAATGGCCATT TTCGACTTTTTTTTGGGATTTTTTTTTTTTTTTTTTTTTTTCCTTTTTTT TATCCTGAAACCGCAAAAAAAAAATGCCCCTAATCGAAACTGAATTAACC CCAACCCACCACCCAATCCATGACCGACTTGTCGAGAAGACACTTCGTGA TAGCGAAGCAAGGTACTGCTGTACTCATACATATGTATATATTTAAATAC ATCTCATATACTAGCAGAGATTGGAACGATTTTTAATGTGAAGAAAACAC ACACACACACACACACACACACACACACACACACACACACACACACACAC ACACACACACACACACACACACACACACACACATACTCCGTATATATATA CACATGTACAAGCAATCCACAGCAGTAGGTAAATATACCTGGTATGATAT GATATGTATATAAAAGTAAAATACACAACATCAACTTTGCGTAGGAGCCG ACGCCACCGTCTCCAAACTCGTGTCCAAGCGCGAGTCGTTCAAGTGCTTT AATGATTTGTTCAAGTGTTTCATAGAGTCTATCCTGGCTTCCCGCGAGGC TGCAAGTGCCTTCTCCTCGTTTTTCTTGCGCTCCTCGGGTGATGCGGCCG TGCTCTTTGCCATCAACACGGCATCGACCCGATCAGTAGATGAGCGGTGG CACGTCCACTTCTTTAGGTCTCTGTATTGCATGTAACCGTCGAGCCCCGT GGCATACGCCTCAACATAGAGCCACGAAATCCGGGCCCACTTGCGAATGA GCGACAGAGACATGGAGCTAAGGGTGGCAGGGAGTCGTTTTAGAAGACTC TTGATGGAATAATCGCACACCCGGCCCAATTGCGCCGCTTTCATCATCTG CGAGAGCAGGCAAGACTGGGAAGTCCGTCGTGGGAACGGGGAGAAGATCA GGAACGGGAGAGAAGAACGATACGATGGACTTCTGACCTCTCCATCGCTC CTGGAGTTTGCGCCGTCGGGTAGACCTTTCGCTAGTCCCATCCGCCGCCC TGCCAGTCAGCTCGCTGTCTTGGTCTGTGTCAGTGAACTCAGCATCGGCT TGGTACGCAAGGTGCTCAGCACGTTCGCCATCCAAGTCCACGTCA
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig625:11673..20967-

>mRNA_P-littoralis_Contig625.9.4 ID=mRNA_P-littoralis_Contig625.9.4|Name=mRNA_P-littoralis_Contig625.9.4|organism=Pylaiella littoralis U1_48|type=CDS|length=2403bp|location=Sequence derived from alignment at P-littoralis_Contig625:11673..20967- (Pylaiella littoralis U1_48)
ATGCTGAACGCTTTGGCCGTAGCCGATGCGGCTTTCCTGTTCCTTGCTGG
TGCAACCAGGATTGGAGAAGCCTTCTTATTTGCAGGCCCAAGGGCCACCT
CAACTCCGCACCGTCATCAACATGATCCTCATTCAGCAGCAGCAGTAGCA
GTCACCACCACGGCGGTGGTGCTCTCGCAAGCCAGACCGCGCACCACCAT
CACTGCTCTGCGCATGACTCCCGCTAAATCTTCAACTAAGCGTCAGCCCC
AGTCATCCCCTGATCCTCAAGCCATCGACGAAGAGGAGGGCACCAGCACG
AGCACCTCCGAGGGCCAAGAAGGTGCGGCCCAACCACCGCCGCTCCCGAA
GGACAGCACTCGGAGAGGGACCGCACTCGACGGGACTTCTCTCGCTTTCC
GACCCCCAACAACGGAAGACATGCATAAATTACGCATGGGTGATTGGGTA
GCCCAAAGAGGGATTGTTGTCTCACTGGTAGCGCTTGATGGTACGGGGCA
AGAGACTAAGGCAGCCGGGGAGGTGATCGTGGGTGCTCCTCTGGTTGGAG
CGGTGGTGGAGTCCATGGACGGGGTGGGAGGGTCTTCTGTGGCGACAAGG
GTGTGCTTGTTGAGGCATCGGCGTGAGGATGGCGTGTCGGAGGCCGTGGA
GCACGCCCTGCTGGACGAGACGATCAATCAGTTCCTCAACGACGGAGCAA
GAATCAGCCAGTTGCGGGTGGAAGCGGATGATTCACCGCAATCCGTCGAG
TTCTACTCTCGCCACGGATTCGTCAGCGCCACCGAAGCATCAGCCGATGG
GCGCTTGTTGCTAGCCGGAGATCGCAATGCAGCGTTGACTGCGATACAGG
GGTCGCTCCGGGAGGGAGAGGGGGGGGGGCAGGGCGGTGTTGGCGCTGTT
GTGATGAACCTCATGGCGCGGCTGCTCCACGATGCGGGAAACCTCCAGGG
CGCTGTGGATGCCTACCTGAAGGCACTGGAGGCATGGCCACCCTTTCAAC
GTTGCTCGCTGCAGACGGACCCAACCCGCAGCGAAGTCTTCCGCGGCCTA
GGGGGCGCTTACCAGAGCCTGGGGCAGCACCAGATGGCTTTCGCGAGCTA
CCAGCAGGCGATCAACCTCGCCCCCTCGGACCTCCTAGCCTACCTCAAAC
TCGGGATGCTATACGAAGATCTGGCCGTGGGAAAGTACGAAGAAGCCGGG
GACCATGCCATCCGATGCTTCGAGTACTATCTGCAGCACTCGGGGAGCGA
AGACACGGATGTGCTTACGAGGCTGGGAAATCTTCAGGTGTTGAGACTCG
ACCCAGCCTCTGCGGTGGAGACGTACAGGAGGGCCTTGGCGGTGGACAAC
TCCCTTTCCAACGTCTGGTTTAACCTTGCGAATGCCCACCTCAAGCTGGG
GGAGGAAGAGGAGGCGGCAAGATGTCTACACGAGAAGCTCGAGCTAGACC
CCGACCCAAGAGCCGGAGTATCTGCCAGGTACCTGCTGGCTTCGATCGAG
GCGGACCCGGGGCGACTTACGAAGGACGATCAGCTAGCTTACGCGAGAGA
GCTGTTCGAGTACTACGCTCCAAAGTACGACGATCACATGCGGAAGAAGC
TCCTGTACACCGGGCCTAGGCTGCTCCGACAAAACATGAAAGAGGTCTAC
AACGCCACCTTTCTGTCTTTCCCGGAAGAGATTCGGTCCAGCCACCATGG
TGACGTGCTCTCCTATCTCAACGGATCTCTCGACATCCTCGACCTCGGCT
GCGGGACCGGGCTTATTGGCAGCTGGTTCAAGGACTACGCCAGGAAGCTG
GTCGGGGTGGACGTGTCGCCAACCATGCTAGACATGGCCACCAAGAAAGG
ATGCTACCACGAGCTGCGAAAGGGGGACTTGGGAGCATACCTAGCCGCGT
CGGAGGAGGAACAGTTCGACCTCGTCGTCGCAGCCGAGACGCTGCAATAC
CTAGGCCCGCTGGACACGGTCGTGTTGGACACCTTCAAGGTCTTGAAGCA
CGGGGGGTATTTTTCGTTCACTGTGGACAGACGAAGAACAGAGGAGGAGG
AGGACGATGACGAGGATGAGGAAAAAAGAGAAGAGCCGGGAGCTGCGGCC
GTGGGGGAACTCGGATACACCTTGAAGACGGAAGGTACCTACGCGTATAC
CAGAGCTTACCTCGAAGAGTTAGCGCGGCGAAGCGGTTTCGAAGTTGTAA
TTTTGAAGCGACACTCCACCACGGTGGAAAGAGGAGAAGCCGCCCCTCTC
CATCGCTCCTGGAGTTTGCGCCGTCGGGTAGACCTTTCGCTAGTCCCATC
CGCCGCCCTGCCAGTCAGCTCGCTGTCTTGGTCTGTGTCAGTGAACTCAG
CATCGGCTTGGTACGCAAGGTGCTCAGCACGTTCGCCATCCAAGTCCACG
TCA
back to top