prot_P-littoralis_Contig623.34.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig623.34.1
Unique Nameprot_P-littoralis_Contig623.34.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length185
Homology
BLAST of mRNA_P-littoralis_Contig623.34.1 vs. uniprot
Match: A0A6H5KJ87_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ87_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 6.270e-11
Identity = 46/87 (52.87%), Postives = 54/87 (62.07%), Query Frame = 0
Query:    3 MSCVCRHAARTVFKSVRTTTMIAPAMIAKGPSSFVTTTAVKGLSY-ESGGQGQSPWSGHG---GGGDMMGGSDRPPRRVVERRRGDW 85
            M   CR+AAR V    R   +IAPA +    +      AV+ LSY + GGQG +PWSGHG   GG  +MGGSDRP RRVVERR GDW
Sbjct:    1 MMSACRNAARAVLCVRRP--LIAPARLVVPATPGA---AVRALSYAQDGGQGGAPWSGHGDDGGGHGVMGGSDRPRRRVVERRPGDW 82          
BLAST of mRNA_P-littoralis_Contig623.34.1 vs. uniprot
Match: A0A6H5JRL5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL5_9PHAE)

HSP 1 Score: 62.0 bits (149), Expect = 2.380e-8
Identity = 27/42 (64.29%), Postives = 29/42 (69.05%), Query Frame = 0
Query:   80 RRRGDWDCPECGNHVFASRSVCPRCQEPKPDGMDSYGGRRER 121
            RR GDWDCP CGNH FASR VC RC  P+P+G    GG  ER
Sbjct:  130 RRPGDWDCPSCGNHCFASRVVCNRCPTPRPEGA---GGGFER 168          
BLAST of mRNA_P-littoralis_Contig623.34.1 vs. uniprot
Match: A0A7S2SUK3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUK3_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 1.000e-7
Identity = 23/36 (63.89%), Postives = 26/36 (72.22%), Query Frame = 0
Query:   80 RRRGDWDCPECGNHVFASRSVCPRCQEPKPDGMDSY 115
            RR GDWDCP CG HVFAS+S C +C  P+PDG   Y
Sbjct:   92 RRPGDWDCPSCGAHVFASKSNCFKCGTPRPDGGGGY 127          
BLAST of mRNA_P-littoralis_Contig623.34.1 vs. uniprot
Match: A0A812T5M7_SYMPI (CysS protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812T5M7_SYMPI)

HSP 1 Score: 57.8 bits (138), Expect = 3.420e-7
Identity = 22/42 (52.38%), Postives = 26/42 (61.90%), Query Frame = 0
Query:   78 VERRRGDWDCPECGNHVFASRSVCPRCQEPKPDGMDSYGGRR 119
            +ERR GDW CP CG  VFA++  C  C EP+P G   Y G R
Sbjct:   81 IERREGDWSCPNCGKLVFAAKDTCFSCGEPRPSGDRGYNGGR 122          
BLAST of mRNA_P-littoralis_Contig623.34.1 vs. uniprot
Match: A0A7S2PN73_9DINO (Hypothetical protein n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2PN73_9DINO)

HSP 1 Score: 55.1 bits (131), Expect = 1.500e-6
Identity = 21/32 (65.62%), Postives = 25/32 (78.12%), Query Frame = 0
Query:   78 VERRRGDWDCPECGNHVFASRSVCPRCQEPKP 109
            VER+ GDWDCPECG  VFAS++ C +C  PKP
Sbjct:   15 VERKAGDWDCPECGAMVFASKNACFKCGAPKP 46          
BLAST of mRNA_P-littoralis_Contig623.34.1 vs. uniprot
Match: A0A7S1T185_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1T185_9CHLO)

HSP 1 Score: 53.9 bits (128), Expect = 2.380e-6
Identity = 21/40 (52.50%), Postives = 26/40 (65.00%), Query Frame = 0
Query:   81 RRGDWDCPECGNHVFASRSVCPRCQEPKPDGMDSYGGRRE 120
            R GDW CP C  HVFA ++ C  C EPKP+G ++ G R E
Sbjct:   50 RAGDWLCPSCNAHVFAGKTNCFHCDEPKPEGAEAVGFRGE 89          
BLAST of mRNA_P-littoralis_Contig623.34.1 vs. uniprot
Match: A0A7S2STL9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STL9_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 6.450e-6
Identity = 22/39 (56.41%), Postives = 24/39 (61.54%), Query Frame = 0
Query:   79 ERRRGDWDCPECGNHVFASRSVCPRCQEPKPDGMDSYGG 117
            +RR GDWDCP CG H FASRS C +C  P P      GG
Sbjct:  100 DRRAGDWDCPSCGAHCFASRSTCFKCGTPNPGPGGPDGG 138          
BLAST of mRNA_P-littoralis_Contig623.34.1 vs. uniprot
Match: L8GI03_ACACA (Znfinger domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GI03_ACACA)

HSP 1 Score: 55.1 bits (131), Expect = 9.990e-6
Identity = 20/34 (58.82%), Postives = 25/34 (73.53%), Query Frame = 0
Query:   78 VERRRGDWDCPECGNHVFASRSVCPRCQEPKPDG 111
            ++RR GDWDCP CG+  FASRS+C +C  PK  G
Sbjct:    1 MQRREGDWDCPNCGDMNFASRSICRKCSSPKSGG 34          
BLAST of mRNA_P-littoralis_Contig623.34.1 vs. uniprot
Match: A0A830HUW3_9CHLO (Uncharacterized protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HUW3_9CHLO)

HSP 1 Score: 54.7 bits (130), Expect = 1.550e-5
Identity = 23/49 (46.94%), Postives = 28/49 (57.14%), Query Frame = 0
Query:   69 GSDRPPRRVVERRRGDWDCPECGNHVFASRSVCPRCQEPKPDGMDSYGG 117
            G  RP     + + GDW CP+CG H FASR  C  CQ P+P G+   GG
Sbjct:  195 GYGRPYNPANDFKPGDWSCPQCGAHNFASRQACFSCQGPRPMGVPMAGG 243          
BLAST of mRNA_P-littoralis_Contig623.34.1 vs. uniprot
Match: A0A6V8CTI8_9ARCH (RanBP2-type domain-containing protein (Fragment) n=2 Tax=Candidatus Poseidoniales TaxID=133814 RepID=A0A6V8CTI8_9ARCH)

HSP 1 Score: 53.5 bits (127), Expect = 1.670e-5
Identity = 24/53 (45.28%), Postives = 30/53 (56.60%), Query Frame = 0
Query:   69 GSDRPPRRVVERRRGDWDCPECGNHVFASRSVCPR--CQEPKPDGMDSYGGRR 119
            G  R   R    + GDW CP+C NH FAS++ C R  C+EPKP+     GG R
Sbjct:  129 GDRRGNERDSRMKPGDWMCPKCNNHNFASKTSCNRTGCEEPKPNDTSGQGGNR 181          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig623.34.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A6H5KJ87_9PHAE6.270e-1152.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRL5_9PHAE2.380e-864.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2SUK3_9STRA1.000e-763.89Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A812T5M7_SYMPI3.420e-752.38CysS protein n=2 Tax=Symbiodinium TaxID=2949 RepID... [more]
A0A7S2PN73_9DINO1.500e-665.63Hypothetical protein n=1 Tax=Brandtodinium nutricu... [more]
A0A7S1T185_9CHLO2.380e-652.50Hypothetical protein (Fragment) n=1 Tax=Tetraselmi... [more]
A0A7S2STL9_9STRA6.450e-656.41Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
L8GI03_ACACA9.990e-658.82Znfinger domain containing protein n=1 Tax=Acantha... [more]
A0A830HUW3_9CHLO1.550e-546.94Uncharacterized protein n=1 Tax=Pycnococcus provas... [more]
A0A6V8CTI8_9ARCH1.670e-545.28RanBP2-type domain-containing protein (Fragment) n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001876Zinc finger, RanBP2-typeSMARTSM00547zf_4coord: 83..107
e-value: 7.1E-5
score: 32.2
coord: 129..153
e-value: 4.6E-8
score: 42.8
IPR001876Zinc finger, RanBP2-typePFAMPF00641zf-RanBPcoord: 127..155
e-value: 3.0E-9
score: 36.0
coord: 81..110
e-value: 6.2E-7
score: 28.6
IPR001876Zinc finger, RanBP2-typePROSITEPS01358ZF_RANBP2_1coord: 131..150
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 127..156
score: 10.680932
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 81..110
score: 9.732388
NoneNo IPR availableGENE3D4.10.1060.10coord: 74..111
e-value: 5.2E-12
score: 46.8
coord: 117..157
e-value: 2.7E-13
score: 50.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 47..75
NoneNo IPR availablePANTHERPTHR23111ZINC FINGER PROTEINcoord: 41..158
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 80..111
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 119..157

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig623contigP-littoralis_Contig623:48688..52168 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig623.34.1mRNA_P-littoralis_Contig623.34.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig623 48614..53021 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig623.34.1 ID=prot_P-littoralis_Contig623.34.1|Name=mRNA_P-littoralis_Contig623.34.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=185bp
MAMSCVCRHAARTVFKSVRTTTMIAPAMIAKGPSSFVTTTAVKGLSYESG
GQGQSPWSGHGGGGDMMGGSDRPPRRVVERRRGDWDCPECGNHVFASRSV
CPRCQEPKPDGMDSYGGRRERERVQKRAGDWECPSCQFHNFASRQECYKC
QVVKPHDAKGFDDPYGGGRGGRERWQGGGGFNNY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001876Znf_RanBP2
IPR036443Znf_RanBP2_sf