prot_P-littoralis_Contig620.49.6 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig620.49.6
Unique Nameprot_P-littoralis_Contig620.49.6
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length394
Homology
BLAST of mRNA_P-littoralis_Contig620.49.6 vs. uniprot
Match: A0A6H5LPM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LPM1_9PHAE)

HSP 1 Score: 191 bits (486), Expect = 4.550e-55
Identity = 145/280 (51.79%), Postives = 161/280 (57.50%), Query Frame = 0
Query:   63 MTSSLEAFPECWQPLNWSRFEETLQALVDGQDNRTLNARVTYLDIALDCLVASRRHXXXXXXXXXXXXXXXXXXXXXVQAGRAAEPLLPPLFLGAGGDQDGRAALKRCSKWAAKVWAKRHAGTMASIARPAGAHGGGNKDTSSIESNVTNARVCMAVSRAMGEALEAFRTAGGXXXXXXXXXSALQLEGCQLVAVELEYHGEVVPSAAGSESAGAQSAKEEAEAREATAKCLAGLVRSLGGRPFCPTLAGVLLQNMPSQKTSEAG--VEVERLKALLRRQ 340
            MTSSLEAFP CWQPLNWSRF+E LQ LV G+D   L AR  YL I LD L   RR       XXXXXXXXXXXXX              PL LGAGGD+DGR ALK+C+KWAA+VWA RHAG  A  A       GG K     +  + N RVCM  SRA+ EALEAFR A G            +LEGC+L AV LE           SES G + A          A+ LAGL+RSL GR FC  LA VLL+NMP Q        VEVE+LKALLRRQ
Sbjct:    1 MTSSLEAFPRCWQPLNWSRFDEALQDLVVGKDPLELGARAAYLGIVLDSLETFRRQRQGAVGXXXXXXXXXXXXX--------------PLLLGAGGDRDGRTALKQCAKWAARVWAHRHAGVAAGAA-------GGRK----YDEEIVNTRVCMTASRALAEALEAFRMAAG------------ELEGCRLAAVILESE---------SESNGGKEA----------ARGLAGLMRSLSGRTFCSALARVLLENMPEQXXXXXXXVVEVEKLKALLRRQ 224          
BLAST of mRNA_P-littoralis_Contig620.49.6 vs. uniprot
Match: D8LSY8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSY8_ECTSI)

HSP 1 Score: 84.3 bits (207), Expect = 4.590e-16
Identity = 62/126 (49.21%), Postives = 70/126 (55.56%), Query Frame = 0
Query:  217 MAVSRAMGEALEAFRTAGGXXXXXXXXXSALQLEGCQLVAVELEYHGEVVPSAAGSESAGAQSAKEEAEAREATAKCLAGLVRSLGGRPFCPTLAGVLLQNMPSQKTSEAG--VEVERLKALLRRQ 340
            M  SRA+ EALEAF  A G            +LEGC+L AV LE           SES G + A          A+ LAGL+RSL GRPFC  LAGVLL+NMP Q     G  VEVE+LKALLRRQ
Sbjct:    1 MTASRALAEALEAFGVAAG------------ELEGCRLAAVILESE---------SESNGGKEA----------ARGLAGLMRSLSGRPFCSALAGVLLENMPEQHQGGGGGVVEVEKLKALLRRQ 95          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig620.49.6 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LPM1_9PHAE4.550e-5551.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSY8_ECTSI4.590e-1649.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 349..375
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 118..140
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 118..143

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig620contigP-littoralis_Contig620:128228..129729 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig620.49.6mRNA_P-littoralis_Contig620.49.6Pylaiella littoralis U1_48mRNAP-littoralis_Contig620 125349..130909 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig620.49.6 ID=prot_P-littoralis_Contig620.49.6|Name=mRNA_P-littoralis_Contig620.49.6|organism=Pylaiella littoralis U1_48|type=polypeptide|length=394bp
MPPSLSSSLMHGLMDDELSSLVSTVAEFAARRVRPTVAFCDRTMQTIFSS
KCRFQTEQLRRIMTSSLEAFPECWQPLNWSRFEETLQALVDGQDNRTLNA
RVTYLDIALDCLVASRRHQEQQQRPSGNSSSSSSNSGGGVQAGRAAEPLL
PPLFLGAGGDQDGRAALKRCSKWAAKVWAKRHAGTMASIARPAGAHGGGN
KDTSSIESNVTNARVCMAVSRAMGEALEAFRTAGGGGGGGNGSSSALQLE
GCQLVAVELEYHGEVVPSAAGSESAGAQSAKEEAEAREATAKCLAGLVRS
LGGRPFCPTLAGVLLQNMPSQKTSEAGVEVERLKALLRRQQTWGMCSGGR
GGAGEKGGRRDGAGGGGRGSRAGAKGVQSGSLPRVCVVLVGYQ*
back to top