mRNA_P-littoralis_Contig62.102.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig62.102.1
Unique NamemRNA_P-littoralis_Contig62.102.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig62.102.1 vs. uniprot
Match: A0A6H5JDL1_9PHAE (Lipoyl synthase, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JDL1_9PHAE)

HSP 1 Score: 701 bits (1810), Expect = 5.160e-251
Identity = 362/437 (82.84%), Postives = 381/437 (87.19%), Query Frame = 2 
Query:  143 SRYACRQGRIILQQAV-RSGSRSXXXXXXXXXXXXXXXXXXXXXXXXTDESGSRLGALRKKLRDEEELAVTGVELHDFSFSGDVSYGTAVPRRTRDKTGKVIHRKPNWLKAVPTQGENYERLRSTVRELGLATVCEEAKCPNIGECWGGAEGTATATIMIMGDTCTRGCSFCAVKTSRAPPPLDADEPEKVAKAVTDWGLGYVVLTSVDRDDLPDQGADHFASTVRGLKRRAPKLLVECLAPDFRGDLKLAEEVALSGLDVFAHNLETVERLQGRVRDHRAGYRQSLSVLEHAKKVTDGKVITKTSLMLGVGETPSDVEATLRDLRAVGCDVVTFGQYLRPSKRHMPMREYVTPEAFAEWQRVAEGMGFLYVASGPMVRSSYKAGEFFLKTVIEQRRAGQQAEAGIPS---GAKPEAHRHSSRDFEADGVVVTASSA 1441
            +R ACRQGR +LQQ + RS +R+                         DES SRLGALRKKLR+EEE A  GV LHDFSFSGDVSYGTAVPRR RDKTGKVIHRKPNWLKAVPTQG+NYERLRSTVRELGLATVCEEAKCPNIGECWGGA+GTATATIMIMGDTCTRGCSFCAVKTSRAPPPLDADEPEKVAKAVTDWGLGYVVLTSVDRDDLPDQGA+HFASTVRGLKRRAP+LLVECLAPDFRGDL+LAE+VALSGLDVFAHNLETVERLQ RVRDHRAGY QSLSVLEHAKKVT G+VITKTSLMLGVGETP+DVEATLRDLRAVGCDVVTFGQYLRPSKRHMPMREYVTPEAFAEWQRVAEGMGFLYVASGPMVRSSYKAGEFFLKTVIEQRRAG +  A + +   G   E   H S++ E DGVVVTASSA
Sbjct:    9 TRTACRQGRAMLQQQIGRSSTRALSSAAPA-----------------VDESDSRLGALRKKLRNEEESAAMGVTLHDFSFSGDVSYGTAVPRRNRDKTGKVIHRKPNWLKAVPTQGDNYERLRSTVRELGLATVCEEAKCPNIGECWGGADGTATATIMIMGDTCTRGCSFCAVKTSRAPPPLDADEPEKVAKAVTDWGLGYVVLTSVDRDDLPDQGANHFASTVRGLKRRAPQLLVECLAPDFRGDLELAEQVALSGLDVFAHNLETVERLQSRVRDHRAGYEQSLSVLEHAKKVTRGEVITKTSLMLGVGETPADVEATLRDLRAVGCDVVTFGQYLRPSKRHMPMREYVTPEAFAEWQRVAEGMGFLYVASGPMVRSSYKAGEFFLKTVIEQRRAGGENAASVNTASGGEGAETAHHQSQESEVDGVVVTASSA 428
[Close]
BLAST of mRNA_P-littoralis_Contig62.102.1 vs. uniprot
Match: A0A836CIS6_9STRA (Lipoyl synthase, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIS6_9STRA)

HSP 1 Score: 528 bits (1361), Expect = 3.160e-183
Identity = 263/351 (74.93%), Postives = 292/351 (83.19%), Query Frame = 2 
Query:  284 DESGSRLGALRKKLRDEEELAVTGVELHDFSFSGDVSYGTAVPRRTRDKTGKVIHRKPNWLKAVPTQGENYERLRSTVRELGLATVCEEAKCPNIGECWGGAEGTATATIMIMGDTCTRGCSFCAVKTSRAPPPLDADEPEKVAKAVTDWGLGYVVLTSVDRDDLPDQGADHFASTVRGLKRRAPKLLVECLAPDFRGDLKLAEEVALSGLDVFAHNLETVERLQGRVRDHRAGYRQSLSVLEHAKKVTDGKVITKTSLMLGVGETPSDVEATLRDLRAVGCDVVTFGQYLRPSKRHMPMREYVTPEAFAEWQRVAEGMGFLYVASGPMVRSSYKAGEFFLKTVIEQRRAG 1336
            D    RL ALR++L   +E A  G      SFS    Y + VP+RTR + G VIHRKP WLKAVPTQGENY++LR TVRELGLATVCEEAKCPNIGECWGG EGTATATIMIMGDTCTRGCSFCAVKTSRAPPPLD +EPEKVAKA+  WGL YVVLTSVDRDD+ DQGA HFA TV  LK R PK+LVECL PDFRG+  L  +VALSGLDV+AHN+ETVE LQ RVRDHRAGY QS+ VLEHAK VT G+V+TKTSLMLG GETP ++EATLRDLR VGCDVVTFGQYLRPSKRHMPM+EY+TPEAF EWQR+A+GMGF YVASGPMVRSSYKAGEF++K +IE  R+G
Sbjct:   44 DADKPRLRALREQLA--QEKASFG------SFSKG-QYSSPVPKRTRGEGGVVIHRKPPWLKAVPTQGENYQKLRDTVRELGLATVCEEAKCPNIGECWGGKEGTATATIMIMGDTCTRGCSFCAVKTSRAPPPLDPEEPEKVAKAIAAWGLDYVVLTSVDRDDIEDQGAAHFAKTVSNLKERRPKMLVECLTPDFRGEKDLIAQVALSGLDVYAHNVETVEGLQRRVRDHRAGYAQSMGVLEHAKAVTGGRVLTKTSLMLGCGETPPEIEATLRDLRNVGCDVVTFGQYLRPSKRHMPMKEYITPEAFEEWQRIADGMGFKYVASGPMVRSSYKAGEFYIKAIIEASRSG 385
[Close]
BLAST of mRNA_P-littoralis_Contig62.102.1 vs. uniprot
Match: A0A7S2USD1_9STRA (Lipoyl synthase, mitochondrial n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USD1_9STRA)

HSP 1 Score: 467 bits (1202), Expect = 1.210e-159
Identity = 230/348 (66.09%), Postives = 271/348 (77.87%), Query Frame = 2 
Query:  290 SGSRLGALRKKLRDEEELAVTGVELHDFSFSGDVSYGTAVPRRTRDKTGKVIHRKPNWLKAVPTQGENYERLRSTVRELGLATVCEEAKCPNIGECWGGAEGTATATIMIMGDTCTRGCSFCAVKTSRAPPPLDADEPEKVAKAVTDWGLGYVVLTSVDRDDLPDQGADHFASTVRGLKRRAPKLLVECLAPDFRGDLKLAEEVALSGLDVFAHNLETVERLQGRVRDHRAGYRQSLSVLEHAKKVTDGKVITKTSLMLGVGETPSDVEATLRDLRAVGCDVVTFGQYLRPSKRHMPMREYVTPEAFAEWQRVAEGMGFLYVASGPMVRSSYKAGEFFLKTVIEQRRA 1333
            S +RL  LR++L++E+E  +            ++   T +   ++ K  +V   KP+WLKA PT+GE+Y RLR TVR LGLATVCEEA+CPNIGECWGGA+GTATATIMIMGDTCTRGCSFC+VKTSRAPPPLD  EPE VA+A+ +WGL YVVLTSVDRDD PDQG++HFA TVR LK R P LLVECL PDFRG L L   VA SGLDVFAHNLETVERL  RVRDHRA Y QSL VL  AK    G +ITK+SLMLG+GE P +++ TL+DLR V CDVVTFGQYLRP+KRHMP++EY+TPE F  WQ  AEGMGF YVASGP+VRSSY+AGEFFLK ++E+ +A
Sbjct:   27 SNTRLENLRQQLKEEDEAGIA-----------ELKAATIMKSSSKGKKARVP--KPSWLKARPTEGEDYHRLRDTVRRLGLATVCEEARCPNIGECWGGADGTATATIMIMGDTCTRGCSFCSVKTSRAPPPLDPKEPENVAQAIAEWGLDYVVLTSVDRDDQPDQGSEHFAQTVRNLKARKPDLLVECLTPDFRGQLDLISNVARSGLDVFAHNLETVERLTPRVRDHRASYHQSLQVLAEAKSAKPG-LITKSSLMLGLGEKPEEIDQTLQDLRKVDCDVVTFGQYLRPTKRHMPLKEYITPEVFEAWQNAAEGMGFKYVASGPLVRSSYRAGEFFLKALLEENKA 360
[Close]
BLAST of mRNA_P-littoralis_Contig62.102.1 vs. uniprot
Match: A0A7S4DJC2_HETAK (Lipoyl synthase, mitochondrial n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DJC2_HETAK)

HSP 1 Score: 465 bits (1196), Expect = 7.650e-159
Identity = 227/299 (75.92%), Postives = 253/299 (84.62%), Query Frame = 2 
Query:  452 KPNWLKAVPTQGENYERLRSTVRELGLATVCEEAKCPNIGECWGGAE-GTATATIMIMGDTCTRGCSFCAVKTSRAPPPLDADEPEKVAKAVTDWGLGYVVLTSVDRDDLPDQGADHFASTVRGLKRRAPKLLVECLAPDFRGDLKLAEEVALSGLDVFAHNLETVERLQGRVRDHRAGYRQSLSVLEHAKKVTDGKVITKTSLMLGVGETPSDVEATLRDLRAVGCDVVTFGQYLRPSKRHMPMREYVTPEAFAEWQRVAEGMGFLYVASGPMVRSSYKAGEFFLKTVIEQRRAGQQA 1345
            KP WLKAVPT+GENY RLR +VR LGLATVCEEAKCPNIGECWGG E G ATATIMIMGDTCTRGCSFCAVKT RAPPPLD  EPE  A+A+ +WGL YVVLTSVDRDD PDQGA HFA+TVR +K + P +LVECL PDFRG+L L  +VA SGLDVFAHNLETVERLQ RVRDHRAGY QSL VLE A K    K+ITKTSLMLG GE P ++E TL+DLRAV CDVVTFGQYLRPS+RH+P++EY+TPEAFA WQ VAE MGF YVASGPMVRSSYKAGEFFLK ++++R+A + A
Sbjct:   62 KPRWLKAVPTEGENYTRLRESVRRLGLATVCEEAKCPNIGECWGGGEDGFATATIMIMGDTCTRGCSFCAVKTHRAPPPLDPQEPENTAQAIAEWGLDYVVLTSVDRDDQPDQGAAHFAATVRRIKEKRPSMLVECLTPDFRGELPLVRQVATSGLDVFAHNLETVERLQRRVRDHRAGYSQSLRVLE-AAKAAQPKLITKTSLMLGFGEKPEEIEQTLKDLRAVDCDVVTFGQYLRPSRRHIPIKEYLTPEAFAGWQEVAESMGFRYVASGPMVRSSYKAGEFFLKAMLKERQAEEAA 359
[Close]
BLAST of mRNA_P-littoralis_Contig62.102.1 vs. uniprot
Match: A0A5D6XTL6_9STRA (Lipoyl synthase, mitochondrial n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XTL6_9STRA)

HSP 1 Score: 462 bits (1188), Expect = 3.340e-157
Identity = 236/354 (66.67%), Postives = 274/354 (77.40%), Query Frame = 2 
Query:  287 ESGSRLGALRKKLRDEEEL----AVTGVELHDFSFSGDVSYGTAVPRRTRDKTGKVIHRKPNWLKAVPTQGENYERLRSTVRELGLATVCEEAKCPNIGECWGGA-EGTATATIMIMGDTCTRGCSFCAVKTSRAPPPLDADEPEKVAKAVTDWGLGYVVLTSVDRDDLPDQGADHFASTVRGLKRRAPKLLVECLAPDFRGDLKLAEEVALSGLDVFAHNLETVERLQGRVRDHRAGYRQSLSVLEHAKKVTDGKVITKTSLMLGVGETPSDVEATLRDLRAVGCDVVTFGQYLRPSKRHMPMREYVTPEAFAEWQRVAEGMGFLYVASGPMVRSSYKAGEFFLKTVIEQRRA 1333
            E G+RL  LR +L +E +L    A   + L DF+F    S   A P R  + +    +RKP+WLKA PTQG NYERL+ TVR LGLATVCEEAKCPNIGECWGG  +G ATATIMIMGDTCTRGCSFCA+KTS+ P PLD +EP KVAKAV  WGL Y+V TSVDRDD PD GADHFA TVR L+   P++++ECL PDF+GD  L + +A SGLDVFAHN+ETVERLQ RVRD+RA YRQSL VLE AK      ++TKTSLMLGVGE   D+  TL+DLRA G DVVTFGQYLRPS +HMP++EYVTPEAFAEWQRVAE MGFLYVASGPMVRSSYKAGEFF+K +++ R+A
Sbjct:   35 ERGTRLEELRARLEEEAKLGPAFADMAISLQDFAFGERESDAAAKPSRKPNAS----NRKPSWLKAQPTQGANYERLKKTVRGLGLATVCEEAKCPNIGECWGGGKDGVATATIMIMGDTCTRGCSFCAIKTSKKPAPLDPEEPAKVAKAVAQWGLDYIVFTSVDRDDYPDFGADHFAKTVRLLRAELPEIMIECLTPDFQGDKALIDMMAKSGLDVFAHNVETVERLQRRVRDYRANYRQSLFVLEQAKASVP-TLVTKTSLMLGVGERNEDIYQTLKDLRASGVDVVTFGQYLRPSTKHMPVKEYVTPEAFAEWQRVAEQMGFLYVASGPMVRSSYKAGEFFMKNLLKNRQA 383
[Close]
BLAST of mRNA_P-littoralis_Contig62.102.1 vs. uniprot
Match: M4BVM0_HYAAE (Lipoyl synthase, mitochondrial n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BVM0_HYAAE)

HSP 1 Score: 459 bits (1180), Expect = 4.730e-156
Identity = 232/352 (65.91%), Postives = 271/352 (76.99%), Query Frame = 2 
Query:  293 GSRLGALRKKLRDEEELAVTGVE----LHDFSFSGDVSYGTAVPRRTRDKTGKVIHRKPNWLKAVPTQGENYERLRSTVRELGLATVCEEAKCPNIGECWGGA-EGTATATIMIMGDTCTRGCSFCAVKTSRAPPPLDADEPEKVAKAVTDWGLGYVVLTSVDRDDLPDQGADHFASTVRGLKRRAPKLLVECLAPDFRGDLKLAEEVALSGLDVFAHNLETVERLQGRVRDHRAGYRQSLSVLEHAKKVTDGKVITKTSLMLGVGETPSDVEATLRDLRAVGCDVVTFGQYLRPSKRHMPMREYVTPEAFAEWQRVAEGMGFLYVASGPMVRSSYKAGEFFLKTVIEQRRA 1333
            GSRL ALR++L +E  L  T  E    L DF+F  D +  +   R+        ++RKP WLKA PTQG NYERLR TV+ LGL+TVCEEAKCPNIGECWGG  +G ATATIM+MGDTCTRGCSFCAVKTS+ P PLDA+EP KVA+A+  WGL Y+V TSVDRDD  D GA HFA TVR L+ + PK+L+ECL PDF+G  +L + VA SGLDVFAHNLETVERLQ RVRD+RA Y+QSL VLE  K V    ++TKTSLMLGVGE   DV  TLRDLR  G DVVTFGQYLRPS +HMP++ YVTPE FAEWQ+VAE MGFLYVASGPMVRSSYKAGEFF+K++++ R+A
Sbjct:   34 GSRLSALRERLTEEAHLGPTFAEQALSLSDFAFEADAALDSKPSRKPN-----ALNRKPKWLKAQPTQGANYERLRKTVKSLGLSTVCEEAKCPNIGECWGGGKDGIATATIMLMGDTCTRGCSFCAVKTSKKPAPLDAEEPNKVAEAIAAWGLDYIVFTSVDRDDYEDFGASHFAKTVRTLRAKLPKILIECLTPDFQGQNELIDRVATSGLDVFAHNLETVERLQRRVRDYRANYKQSLHVLERVKVVAP-HLVTKTSLMLGVGERNEDVFQTLRDLRNGGVDVVTFGQYLRPSTKHMPVKSYVTPETFAEWQKVAEQMGFLYVASGPMVRSSYKAGEFFMKSLLKNRKA 379
[Close]
BLAST of mRNA_P-littoralis_Contig62.102.1 vs. uniprot
Match: W7U691_9STRA (Lipoyl synthase, mitochondrial n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U691_9STRA)

HSP 1 Score: 459 bits (1181), Expect = 6.040e-156
Identity = 237/349 (67.91%), Postives = 266/349 (76.22%), Query Frame = 2 
Query:  290 SGSRLGALRKKLRDEEELAVTGVELHDFSFSGDVSYGTAVPRRTRDKTGKVIHRKPNWLKAVPTQGENYERLRSTVRELGLATVCEEAKCPNIGECWGGA-EGTATATIMIMGDTCTRGCSFCAVKTSRAPPPLDADEPEKVAKAVTDWGLGYVVLTSVDRDDLPDQGADHFASTVRGLKRRAPKLLVECLAPDFRGDLKLAEEVALSGLDVFAHNLETVERLQGRVRDHRAGYRQSLSVLEHAKKVTDGKVITKTSLMLGVGETPSDVEATLRDLRAVGCDVVTFGQYLRPSKRHMPMREYVTPEAFAEWQRVAEGMGFLYVASGPMVRSSYKAGEFFLKTVIEQRRA 1333
            S  RL  LR+KL++E+         H      +V   T    R R ++      KP WLKAVP +GENY RL++TVR+L LATVCEEA+CPNIGECWGG  +GTATATIMIMGDTCTRGCSFCAVKTSR P PLD  EPE VA+A+ +WGL YVVLTSVDRDDL DQG++HFA TVRGLK R P LLVECL PDFRG   L E VALSGLDV+AHNLETVERLQ RVRDHRAGY QSL VLEHAKK    K++TKTSLMLGVGE P DV ATLRDLR  G DVVTFGQYLRP+KRHMP++ Y+TP  F  WQ  AE + F YVASGP+VRSSYKAGEFFLK V++QR A
Sbjct:   44 SSPRLDRLREKLKEEDAAHAGTCPTHGALPDKEVPKATFPVARRRKRSEP----KPEWLKAVPAEGENYLRLKNTVRKLKLATVCEEARCPNIGECWGGGKDGTATATIMIMGDTCTRGCSFCAVKTSRTPAPLDPLEPEHVARAIAEWGLDYVVLTSVDRDDLVDQGSEHFAKTVRGLKARKPTLLVECLTPDFRGQASLIERVALSGLDVYAHNLETVERLQRRVRDHRAGYSQSLFVLEHAKKRAP-KLLTKTSLMLGVGERPEDVRATLRDLRTAGVDVVTFGQYLRPTKRHMPVQAYITPAQFQAWQAEAEALNFKYVASGPLVRSSYKAGEFFLKGVLKQRLA 387
[Close]
BLAST of mRNA_P-littoralis_Contig62.102.1 vs. uniprot
Match: K3XAM6_GLOUD (Lipoyl synthase, mitochondrial n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XAM6_GLOUD)

HSP 1 Score: 458 bits (1178), Expect = 1.500e-155
Identity = 231/352 (65.62%), Postives = 272/352 (77.27%), Query Frame = 2 
Query:  287 ESGSRLGALRKKLRDEEELAVT----GVELHDFSFSGDVSYGTAVPRRTRDKTGKVIHRKPNWLKAVPTQGENYERLRSTVRELGLATVCEEAKCPNIGECWGGA-EGTATATIMIMGDTCTRGCSFCAVKTSRAPPPLDADEPEKVAKAVTDWGLGYVVLTSVDRDDLPDQGADHFASTVRGLKRRAPKLLVECLAPDFRGDLKLAEEVALSGLDVFAHNLETVERLQGRVRDHRAGYRQSLSVLEHAKKVTDGKVITKTSLMLGVGETPSDVEATLRDLRAVGCDVVTFGQYLRPSKRHMPMREYVTPEAFAEWQRVAEGMGFLYVASGPMVRSSYKAGEFFLKTVIEQR 1327
            E GSRL  LR++L +E     T    GV L DF+F      G A  + +R       +RKP+WLKA PTQGENYERL+ TVR LGLATVCEEAKCPNIGECWGG  +G ATATIM+MGDTCTRGCSFCAVKT++ P PLD +EP KVAKA+  WGL Y+V TSVDRDD PD GA+HFA TVR L+ + P++++ECL PDF+GD +L + VA SGLDVFAHN+ETVERLQ RVRD+RA Y+QSL VLE AK      ++TKTSLMLGVGE   D+  TL+DLR  G DVVTFGQYLRPS +HMP++EYVTPEAFAEWQ VAE +GFLYVASGPMVRSSYKAGEFF+K +++ R
Sbjct:   42 ERGSRLAELRQRLEEEARQGPTFADLGVSLQDFAFDDLEVKGEAFVKPSRKPNAS--NRKPSWLKAQPTQGENYERLKKTVRGLGLATVCEEAKCPNIGECWGGGKDGIATATIMLMGDTCTRGCSFCAVKTNKKPAPLDPEEPAKVAKAIAQWGLDYIVFTSVDRDDYPDYGAEHFAKTVRLLREQLPEIMIECLTPDFQGDKELIDMVAKSGLDVFAHNVETVERLQRRVRDYRANYKQSLFVLEQAKASVP-TMVTKTSLMLGVGERKEDIYQTLKDLRNSGVDVVTFGQYLRPSTKHMPVKEYVTPEAFAEWQNVAEQLGFLYVASGPMVRSSYKAGEFFMKNLLKNR 390
[Close]
BLAST of mRNA_P-littoralis_Contig62.102.1 vs. uniprot
Match: A0A8K1CWL2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CWL2_PYTOL)

HSP 1 Score: 453 bits (1165), Expect = 1.130e-153
Identity = 228/353 (64.59%), Postives = 270/353 (76.49%), Query Frame = 2 
Query:  287 ESGSRLGALRKKLRDEEELAVTGVEL----HDFSFSGDVSYGTAVPRRTRDKTGKVIHRKPNWLKAVPTQGENYERLRSTVRELGLATVCEEAKCPNIGECWGGA-EGTATATIMIMGDTCTRGCSFCAVKTSRAPPPLDADEPEKVAKAVTDWGLGYVVLTSVDRDDLPDQGADHFASTVRGLKRRAPKLLVECLAPDFRGDLKLAEEVALSGLDVFAHNLETVERLQGRVRDHRAGYRQSLSVLEHAKKVTDGKVITKTSLMLGVGETPSDVEATLRDLRAVGCDVVTFGQYLRPSKRHMPMREYVTPEAFAEWQRVAEGMGFLYVASGPMVRSSYKAGEFFLKTVIEQRR 1330
            E G RL ALR++L  E +      +L     DF+F  + S G    R+         +RKP+WLKA PTQG NYERL+ TVR LGLATVCEEAKCPNIGECWGG  +G ATATIM+MGDTCTRGCSFCA+KTS+ P PLD +EP KVA A+  WGL Y+V TSVDRDD PD GA+HFA TVR L+ + P++++ECL PDF+GD +L + VA SGLDVFAHN+ETVERLQ RVRD+RA Y+QSL VLE AK      ++TKTSLMLGVGE   DV  TL+DLR  G DVVTFGQYLRPS +HMP++EYVTPEAFAEWQ+VAE MGFLYVASGPMVRSSYKAGEFF+K +++ R+
Sbjct:   38 EHGERLAALRERLAAEAQQGPAFTDLALTIEDFAFGEEASPGVKPSRKPN-----ASNRKPSWLKAQPTQGPNYERLKQTVRGLGLATVCEEAKCPNIGECWGGGKDGIATATIMLMGDTCTRGCSFCAIKTSKKPAPLDPEEPMKVATAIAQWGLDYIVFTSVDRDDYPDYGAEHFAKTVRILREKLPEIIIECLTPDFQGDKELIDMVAKSGLDVFAHNVETVERLQRRVRDYRANYKQSLFVLEQAKASVP-TMVTKTSLMLGVGEQKEDVFQTLKDLRNSGVDVVTFGQYLRPSSKHMPVKEYVTPEAFAEWQKVAEQMGFLYVASGPMVRSSYKAGEFFMKNLLQNRK 384
[Close]
BLAST of mRNA_P-littoralis_Contig62.102.1 vs. uniprot
Match: LIPA_PHYIT (Lipoyl synthase, mitochondrial n=22 Tax=Peronosporaceae TaxID=4777 RepID=LIPA_PHYIT)

HSP 1 Score: 452 bits (1162), Expect = 2.510e-153
Identity = 229/353 (64.87%), Postives = 269/353 (76.20%), Query Frame = 2 
Query:  287 ESGSRLGALRKKLRDEEELAVTGVE----LHDFSFSGDVSYGTAVPRRTRDKTGKVIHRKPNWLKAVPTQGENYERLRSTVRELGLATVCEEAKCPNIGECWGGA-EGTATATIMIMGDTCTRGCSFCAVKTSRAPPPLDADEPEKVAKAVTDWGLGYVVLTSVDRDDLPDQGADHFASTVRGLKRRAPKLLVECLAPDFRGDLKLAEEVALSGLDVFAHNLETVERLQGRVRDHRAGYRQSLSVLEHAKKVTDGKVITKTSLMLGVGETPSDVEATLRDLRAVGCDVVTFGQYLRPSKRHMPMREYVTPEAFAEWQRVAEGMGFLYVASGPMVRSSYKAGEFFLKTVIEQRR 1330
            E G+RL ALR++L +E     T  E    L DF+F  D + GT   R+         +RKP WLKA PTQG NYERLR +V+ LGL+TVCEEAKCPNIGECWGG  +G ATATIM+MGDTCTRGCSFCAVKTSR P PLD +EP KVA+A+  WGL Y+V TSVDRDD  D GA HFA TV  L+ + P++L+ECL PDF+G   L ++VA SGLDVFAHN+ETVERLQ RVRD+RA Y+QSL VLE AK V    ++TKTSLMLGVGE   D+  TLRDLR  G DVVTFGQYLRPS +HMP++ YVTPEAFAEWQ+VAE MGFLYVASGPMVRSSYKAGEFF+K +++ R+
Sbjct:   32 ERGARLAALRERLAEETRQGPTFAEQALSLEDFAFEADAAPGTKPSRKPN-----ASNRKPKWLKAQPTQGANYERLRKSVKSLGLSTVCEEAKCPNIGECWGGGKDGIATATIMLMGDTCTRGCSFCAVKTSRKPKPLDIEEPNKVAEAIAAWGLDYIVFTSVDRDDYEDLGAGHFAKTVSTLRAKLPEILIECLTPDFQGHDNLIDQVATSGLDVFAHNMETVERLQRRVRDYRANYKQSLHVLERAK-VAAPHLVTKTSLMLGVGERNEDLFQTLRDLRNSGVDVVTFGQYLRPSTKHMPVKSYVTPEAFAEWQKVAEQMGFLYVASGPMVRSSYKAGEFFMKNLLKNRK 378
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig62.102.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JDL1_9PHAE5.160e-25182.84Lipoyl synthase, mitochondrial n=2 Tax=Ectocarpus ... [more]
A0A836CIS6_9STRA3.160e-18374.93Lipoyl synthase, mitochondrial n=1 Tax=Tribonema m... [more]
A0A7S2USD1_9STRA1.210e-15966.09Lipoyl synthase, mitochondrial n=1 Tax=Fibrocapsa ... [more]
A0A7S4DJC2_HETAK7.650e-15975.92Lipoyl synthase, mitochondrial n=1 Tax=Heterosigma... [more]
A0A5D6XTL6_9STRA3.340e-15766.67Lipoyl synthase, mitochondrial n=1 Tax=Pythium bra... [more]
M4BVM0_HYAAE4.730e-15665.91Lipoyl synthase, mitochondrial n=1 Tax=Hyaloperono... [more]
W7U691_9STRA6.040e-15667.91Lipoyl synthase, mitochondrial n=2 Tax=Monodopsida... [more]
K3XAM6_GLOUD1.500e-15565.63Lipoyl synthase, mitochondrial n=1 Tax=Globisporan... [more]
A0A8K1CWL2_PYTOL1.130e-15364.59Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
LIPA_PHYIT2.510e-15364.87Lipoyl synthase, mitochondrial n=22 Tax=Peronospor... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig62contigP-littoralis_Contig62:464822..472554 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LUA7
Preferred nameLIAS
PFAMsLIAS_N,Radical_SAM
Model size1576
Max annot lvl2759|Eukaryota
KEGG rclassRC01978
KEGG koko:K03644
KEGG ReactionR07767,R07768
KEGG Pathwayko00785,ko01100,map00785,map01100
Hectar predicted targeting categorymitochondrion
GOsGO:0001505,GO:0001838,GO:0001841,GO:0001843,GO:0002009,GO:0002237,GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006464,GO:0006520,GO:0006544,GO:0006546,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0006950,GO:0006952,GO:0006954,GO:0006979,GO:0007275,GO:0007399,GO:0008150,GO:0008152,GO:0008610,GO:0009056,GO:0009058,GO:0009063,GO:0009069,GO:0009071,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009605,GO:0009607,GO:0009617,GO:0009653,GO:0009790,GO:0009792,GO:0009888,GO:0009987,GO:0010033,GO:0010467,GO:0014020,GO:0016053,GO:0016054,GO:0016331,GO:0016740,GO:0016782,GO:0016783,GO:0016992,GO:0017144,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0021915,GO:0031974,GO:0032496,GO:0032501,GO:0032502,GO:0032787,GO:0033993,GO:0034641,GO:0035148,GO:0035239,GO:0035295,GO:0036211,GO:0042133,GO:0042135,GO:0042221,GO:0042737,GO:0043009,GO:0043167,GO:0043169,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0046395,GO:0046483,GO:0046872,GO:0046914,GO:0048598,GO:0048646,GO:0048729,GO:0048731,GO:0048856,GO:0050896,GO:0051186,GO:0051188,GO:0051604,GO:0051704,GO:0051707,GO:0060429,GO:0060562,GO:0060606,GO:0065007,GO:0065008,GO:0070013,GO:0070283,GO:0071704,GO:0072175,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901700
Exons6
Evalue1.18e-184
EggNOG OGsCOG0320@1|root,KOG2672@2759|Eukaryota
Ec32 ortholog descriptionRadical SAM
Ec32 orthologEc-14_004300.1
EC2.8.1.8
Descriptionlipoate synthase activity
Cds size1311
COG categoryH
BRITEko00000,ko00001,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig62.102.1prot_P-littoralis_Contig62.102.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig62 464958..472425 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791293.7876852-UTR-P-littoralis_Contig62:464821..4649571680791293.7876852-UTR-P-littoralis_Contig62:464821..464957Pylaiella littoralis U1_48UTRP-littoralis_Contig62 464822..464957 +
1680791293.8643696-UTR-P-littoralis_Contig62:472425..4725541680791293.8643696-UTR-P-littoralis_Contig62:472425..472554Pylaiella littoralis U1_48UTRP-littoralis_Contig62 472426..472554 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791293.800065-CDS-P-littoralis_Contig62:464957..4652601680791293.800065-CDS-P-littoralis_Contig62:464957..465260Pylaiella littoralis U1_48CDSP-littoralis_Contig62 464958..465260 +
1680791293.8098838-CDS-P-littoralis_Contig62:467963..4681721680791293.8098838-CDS-P-littoralis_Contig62:467963..468172Pylaiella littoralis U1_48CDSP-littoralis_Contig62 467964..468172 +
1680791293.8200557-CDS-P-littoralis_Contig62:468984..4691431680791293.8200557-CDS-P-littoralis_Contig62:468984..469143Pylaiella littoralis U1_48CDSP-littoralis_Contig62 468985..469143 +
1680791293.8297217-CDS-P-littoralis_Contig62:470083..4703151680791293.8297217-CDS-P-littoralis_Contig62:470083..470315Pylaiella littoralis U1_48CDSP-littoralis_Contig62 470084..470315 +
1680791293.844709-CDS-P-littoralis_Contig62:471118..4713131680791293.844709-CDS-P-littoralis_Contig62:471118..471313Pylaiella littoralis U1_48CDSP-littoralis_Contig62 471119..471313 +
1680791293.854597-CDS-P-littoralis_Contig62:472212..4724251680791293.854597-CDS-P-littoralis_Contig62:472212..472425Pylaiella littoralis U1_48CDSP-littoralis_Contig62 472213..472425 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig62.102.1

>prot_P-littoralis_Contig62.102.1 ID=prot_P-littoralis_Contig62.102.1|Name=mRNA_P-littoralis_Contig62.102.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=437bp
MMSRYACRQGRIILQQAVRSGSRSSSSSSSSSSSRNTGRALSSAAAAATD
ESGSRLGALRKKLRDEEELAVTGVELHDFSFSGDVSYGTAVPRRTRDKTG
KVIHRKPNWLKAVPTQGENYERLRSTVRELGLATVCEEAKCPNIGECWGG
AEGTATATIMIMGDTCTRGCSFCAVKTSRAPPPLDADEPEKVAKAVTDWG
LGYVVLTSVDRDDLPDQGADHFASTVRGLKRRAPKLLVECLAPDFRGDLK
LAEEVALSGLDVFAHNLETVERLQGRVRDHRAGYRQSLSVLEHAKKVTDG
KVITKTSLMLGVGETPSDVEATLRDLRAVGCDVVTFGQYLRPSKRHMPMR
EYVTPEAFAEWQRVAEGMGFLYVASGPMVRSSYKAGEFFLKTVIEQRRAG
QQAEAGIPSGAKPEAHRHSSRDFEADGVVVTASSAA*
back to top

mRNA from alignment at P-littoralis_Contig62:464822..472554+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig62.102.1 ID=mRNA_P-littoralis_Contig62.102.1|Name=mRNA_P-littoralis_Contig62.102.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=7733bp|location=Sequence derived from alignment at P-littoralis_Contig62:464822..472554+ (Pylaiella littoralis U1_48)
ATCCCACCATCCCGCAAAGCCCGCTCTGCGTGTACTGGTATGCTCTTGTA
GAGGCTAGGATTGTTCCTGAGAGTTGACTAGGACACCCGCGGCGAGCTCA
CAGCCGTGACTTTATTCTCGTCCCTCTCTCGAGCAAATGATGTCTCGCTA
CGCTTGCCGTCAGGGCCGGATCATTCTGCAGCAAGCCGTTCGCAGCGGCA
GCAGGAGTAGCAGCAGTAGCAGCAGCAGCAGCAGTAGCAGGAACACCGGC
AGAGCACTTAGCAGTGCCGCCGCAGCAGCAACGGATGAAAGCGGAAGCCG
GCTTGGTGCTCTCCGGAAGAAGCTCAGAGACGAGGAGGAGTTGGCGGTGA
CTGGGGTGGAACTCCACGACTTCTCCTTTTCCGGGGATGTGTCCTACGGG
ACCGCTGTCCCGCGACGCACGCGAGATAAGACCGGCAAGGTGGGTACGTG
TGCTACTGCTGTACTGACGGTGTACGTGAGCGTCATTCTTGTGAGTCTAT
TTCCCGCTGTGGCTATAGCTACAACTTGAACCGACTGCTAGTATGCTGAT
GCTGGCCTTGTACATACAGCTCGAGACTGCTGTGAGCGAGCGTGCCTTAC
GGGCTCTCAATAGTCTCAACAGATGACTTTCAACTTTCAGAGGAGGTTGC
GCCGCGTCACGCCCCCCGAGACTCAAGACCCGAGTCTCTCGACTCTCCAA
ACTCCAAACGTTAACCCAGCTGCCTCATCCCACATATTCCTGTATTATGT
TTGAGCAGCTGCTGGATGTAGCACTGCTGCATCCATAAGAGTCCCGCATT
GACATAAACAGTCGATGTGCGTTGCATTTGCGCGAGAGGCTTCAATAATT
TAGAGCTGCATCTTCTTCTTCTTCTTCGCTTCTCTCCCTGTATTATACTC
GTACTTGAACCTCATGTCGTATTACAGTACCGGTAATACAGCAGGTCATA
CTTGGATGTATGTTGTGCGTTGTCATCCCATTTATACTGGGCAACAGTCG
TCTACACCTTTCGGTATGAAGTGGGTGCATCAGCCGGGGTCACACAGAAG
GAAGGTCATGTACGAGCTCTCTTGTTTTTTTCATTTTGTTTTGTTGCCCA
CGCCTTTCCTCCTGCGGTACCTGACGTTTTTCATGCTAGTCGGGTACAGC
GATTCCTTCCCTCTCTCTCTCACTACTGTCTGTACTCACGAGTAATTCGC
TTTCCACTAAAACATCTCCTGTGTTGACTTCCCCCTGTGTGACCCCGTCT
ACCTACCCGAAAGGTGTAGAGTAGCGTCCAATTAAAGGGATGACAACACA
CATACACACACCACTGTGTGACCCCGGCTGATGTACCCGCTTAATACCGA
AAGATGAAGACTGGTTCCCAGAATCAATGGGATGATAACACACACTTCTT
TAAAGTCGCAAGAAACGCTCTCAGAGAGAATCGAACCGATGTACTTCGAA
GTACGACCTTACAACTGGGAGGTTCACGAGGGAACCACTAGACCACCGGG
GCGACCGGTGTGTAGTGTATATTGTACGAAATCTCTATCCCTTCAAATGT
CCCAGGTATACTTCACGGCTTTACCGAATACGAAGTAGTTTAGGCTGGCG
TCCAGAATGGATTGCATGACAGCAGCATGATACATGCACTGCTTTCCTCT
TCACCAGGTTGACCAAAGCACGCATTTTTTCGTCTCCGATTCGATCATCC
GCGCTGTGTGTCATGTTGAACACGTACGTAGGCAAACGGCAGCAGTTTCA
CATCTATATACCTCCATGTGTGTTGCTCTTGTCTGTTCGTGCTGGTGGTT
GCGTGGTTGACGACTATCTCTGTGGAGTGCACCTGGTGGTACAGACGGGC
AGGTATGATCACACACGATACACGACGCTGCTGTCACCTCAGCAGCTACG
CCGCTGCAAGCCCAGCACGTCGTGCCGGTAACTGCTGCTGACCGGGCGCG
TTGTCTAGTTTGAGCTCGTTCCGCTATTGATAACATCGTTCAGGTACAAG
TATTTGATGAAGCTTGCTCTGGATAATCATCAAGCAGTGCAACGACAGCA
GTTCTGGGAGCATTTCTGCGAAAGAGATTACGGCCGCCGACCAACACGTG
AACGAGTGAAAAAGAAAAGGACCTCGTACAACAAATGGTTGACGGATCGG
TTCAAATGATTTTTTTTTCTTCTTATAAGAAAAGTGCCCATTCTCAACCC
AAGACGATAACACAGATTGCTCAGAAAAAGCCTTCTCGTGTCCCTTTCCC
GATCGAAAGCATGTGTACAGCAGAAGACACCATGTAGCGGTGACCTGCGT
CTTGGCACACGGTCAGATCTGCTGCTGGGGCCGAAATGTCGAAGGTCGAA
ATCATTGTTCAGGAAGTCCAGAAATCGTCCGCATCTCAGCCAGACCCCAA
GCAACTTCCCTTGCTGTACCCATCGCCGTGGGCCCCGTTGCGGGTCTTCA
GCAGAAGCGTGGTCAACAGCAGTAGCACTTACCCCGAGCTACTACTGTTG
TAGACCCGTAGTTCACGAGATGAGGCCCGTGGCGACGAGGACGGCAGTGA
ATACGGACGAAAAGATGTTTAGGGGCTCGATGAGATGCGGACGGTTTCTG
GACTTGCTGAAAAATAATTTCGAACTTCCGACATTTTGGCCCCAGCAGCC
AGATCCGAGCGTGTGCCAAGACGCAGGTCACCGCCGCACGGGGTATCCTC
TGTTGATTTCATGCTTTCGATCGGGAATGGGAACACGAGGACGCTTACTC
TGAGGAATCTGTTTTGCTGTCTTGGATTGAGACTTGGTACTTTCTTTCTT
GGAAAAATAACAGTATCAGTTGGACCGAGACCGATCCCGTATGGCCAGGA
AAACGCTACAAGATACGGACAGTCGATAGCGTGGCGCGCTTCGTGTACTC
GCATTATTACGGTAATACGTAGTAGCTGCTGCTGCCGTACACGCTGGAAT
GGTTATTTCTTTCAGAGAAACAGAAACAGCAGTAGTGCTCCGACGTTTTC
GATGGAACTACGACTGCGGTCCACGCGGTCCATGGCCTCTCACGTCTAAG
GAAAGCAACAACAACAACAACAAGAGTCACACTAACAAAATGCCGGTTTG
CCCCCACAAAGAATAACCCGACGACATTCCTTTCGCTCGCAGGTGATTCA
TCGCAAGCCCAACTGGCTCAAAGCCGTGCCCACGCAGGGCGAGAACTACG
AGCGGCTTCGCTCTACTGTGAGGGAGCTCGGCCTCGCCACCGTCTGCGAG
GAGGCCAAGTGCCCCAACATCGGGGAGTGCTGGGGCGGGGCGGAAGGCAC
CGCGACGGCCACGATCATGATCATGGGCGACACGTGCACGAGAGGGTGCA
GGTAGGAGACCCGACGGGCGTTTCAGTACGTGCTCGGATGAGAGCTATGA
TAGCCGTTGTCAGCCCAGCGCTTCGTTTTCGGAGGAAGCATTGGTTGGTT
GTCCTACCACATACCAGCAGCAGTAGCAGCAGTGTACATAGAGAGCGTGG
CAAACCATCGCACGGGAGGGGGGGCGGGAGAGGAATACGATAAAGCAAGG
TGGTTGTCGTTGAGGCTGCGATCGTCTGTCACGGAAGCAGCAAGCGACTG
GAGGGTGATGGAAGAGAGGGCGGGGCACTTGGCCTTTCTCATCCAATCGT
TTGATCGCCTTTTGAAGTATTTCGACTGTTGTTGGAACCCACACACCTCG
GTTCCTGCTCCTGAAAGAATCGCCTTCGTAAAGCTTGAGTTCTTCCATGT
CTACGCGGTTTCGATGATGCGTGGTATTTTTTTTATTTTTTTTATTACTG
TCATAAAATGCTATCATGTCGTATCATACGATTGCTGCGTTCTTAGCCGC
CTTTTCGAAGCATGTTATTGGAAACAGTTTCCCCAAACACCAAAATCAAG
AAATAAAACTTCTGCGTGAGTATGGCAGTGCAATCAGCACAGCCTTTTTT
GTTTGCATGGTATTTTTATAAAATGTCCGTTTTCTGATATACGGAGTAAA
CGGCATCACAAAGTCGTATGTTTTTTCTCTGAAATGTCCTTTTTTCTGAT
GTATACCAAATCACAAAGTCGTATGTTTTTTCTCTGAAATGTCCGTTTTC
CTGATATAGACATTACATAATCGTCTTTTTTTATCTGAAATGCTTTCTTT
TCGCAACAATTAGCTTTTGCGCCGTCAAGACCAGCCGCGCACCTCCCCCG
CTGGACGCCGATGAGCCCGAAAAAGTTGCCAAGGCCGTCACTGACTGGGG
CTTGGGCTACGTTGTGCTGACGAGCGTCGACCGTGACGATTTGCCCGATC
AGGGGGCAGACCACTTCGCGAGGTAAGCACGAGGGAGCGAGGGGGGTTGG
GGCGGGGGTGGGGGATGGGGGGTACCGACTGGGTGCTTGCCTTCGTTAGC
TAGCGGACCACTGGCTCCGCGCGCCCTCTCGGACACAGGGCGCCACCGCT
CGTTCTTTTTTTACAAGGGGGTGGCGCGTTTTTTCAATACATACACATAC
ATGTACACACACACGCACACGCGCGCACACATGCACGCGCACACATGCTC
ACGCACACGCACATCCAGACGCCTTCCGCACTTTGTCCCGAGAGTAGCGA
AGTAAATCAGCCGAGCCATGCCACTGCTTCAGTTTTATTTGAAGCTCCTG
TCCCCTGTCTCCTCCTCCACCCACCCACCCACCCACCCACCCACCCAAAT
GGTGATGAAAATATCATAAACGAATCCGACACCCACTACCGTAACAGCAC
GGCGGCGAGAGATAGTCCCGAAAAAAAGGGTGCGTATCCACGAGGGAGGC
CGGCGGAGCGCCAAATCAAGCAAGCACACTCACCCCCCCTATCGTAGTTT
TCCGGGGCTACGATTGAAAACTTTGCGTTTACCACAAATGTTTCGTCAAG
AACAGGTGCCCGTCGTCGTCACCCTTTTCGATACAACAAAATTTCCACTT
ATTAAGGAGAAAAACAAAGTTTCCACTCATCAAAGAAGACCTACGTACTA
CGTAGGAAAGGCGCTCGGTTTTCGTCCCGCACGTACACGAAACATCCGCG
GCGATCGACACGTGTAAAACCCGCGCAAAGGAATGCAGGATTAATTGATT
TTATATATAGAGCCTTTTCTTTCTTTGAGATGGTCCCCCTTCACCTTCGC
CTTCGCCTTCGCCTTCCCCTTCCCCAATTTTGTTGGAAAATACGTGAATT
TTATTTGTTTTTTTTTGGAAAAATGAACAACAAATGTTTTTTTGCGAAAT
AAACAACAACAGCACGGTGCGAGGCTTGAAGCGGCGTGCCCCCAAGCTCC
TCGTGGAGTGCCTAGCGCCCGACTTCCGGGGCGACCTCAAGCTGGCGGAG
GAGGTGGCCCTGTCGGGGCTGGATGTGTTCGCGCACAATCTCGAGACGGT
GGAAAGGCTGCAGGGCCGCGTAAGGGACCACCGAGCGGGATACAGGCAGA
GCCTGTCAGTGCTCGAGCATGCCAAGAAGGTTACGGACGGAAAGGTGATG
GCTGTTGCTGTTGTTGATGATATTATTGTTGTTGTTGTTGTTATTGATTT
TAGTGGTGGTGGTGGTGGTGGTGTTGGAACTGTTTGTTGATGGTTGTGGT
GGTGGTGGTGGTGGTGGTATTGTTGTTGTTGTTGTTGTGAGTAGTTGTCG
TGGTGGTGGTGTCGTTGGTGGTGCTGGTGGTAGTTGGGATGGTGCTGGTG
GTGGTGGCGGTGTTGCTTTTGCTGTTGTTGTTGTGGTTGTTGTTGCTTTA
GGTAGTGGTGGTCTTGGTTGGCGGTTGTGGTGCCGGTGGTGGTTTTTGTG
GTCTGTTGTTGCTGTTGGTGGTGGCAGCGTTATGGTTATTTTTCCCGTTG
AAGGTGGTGCTACTGCCAATGGTGTTGTCGTCGGTGATGTTAATTGCTGA
TGCCGTTGCTGTCGTTTTTTAATGTTGGCCTACTCGTACTAATTATTTGT
TGAGCGAGGGCTGAAAGGGACGCAAACTATTTTCTCCTTCTCTTTTTTTG
GGCCCTGGTCAAATCATCGTAGATGGATGCCTTTGTTTTTGTTTTGTTTT
GTTTTTCGTGCGGCGCGTTTTCCTGTTGGTCGTGCCAACTCAAACCATGT
CGCCGCTTGCCCTCACAACAATGCAGGGTTCTGCTTGTGCTGCTGGTGCT
GGTGCTGGTGTGCCGTTGTTGTTGCTGCTGCTGTTGCCGCTGCTACTGTG
TGATCGTGATCGTGATCGATGGCTTTGGCACCATCCGCGGCTTACCCTTT
GACCTCACCCTCCTCCACCTCTACCTCTACCTCCACCCTCACCGAAGGTG
ATCACGAAGACATCGCTGATGCTCGGCGTCGGAGAGACCCCCTCGGACGT
CGAGGCGACCCTGAGAGACTTGAGGGCTGTGGGGTGCGACGTCGTGACGT
TCGGGCAGTACCTTCGCCCGAGCAAGCGGCACATGCCCATGCGGGAATAC
GTCACTCCGGAGGCGTTTGCGGAGTGGCAGAGGGTCGCAGAGGTGTGGTT
TTATTGAATTGAACACTAGAGTGTGTGTGCGTGCGCGCGTGCTTGCATGC
GTGTGGGGGTATGGGGGTATGGCGGTGACTCGACTCCACGTGTTGTTTCG
ATGGGTTTGACTGAGTCCGCGGGGTATAGTAGAGGAGGGAGGAACGGCAG
TGGCGGAGCGGGGGGCACAAGCAAGCAGAGTGACACAAGGGTATATGCAC
ACGTGTGTGTGCGTGTGTGCGTGTGTGCGTGTGTGTGTGGCATTGTAGCT
CGTCGGTCCGCATGGCGGGATAAGGGTGGGGGGAGGAGGCGGGGAGAGAG
CGGTGTACGCCCCGCTGTGACGCGAGGTCGTTCCTTTTCCGCGAATGTTC
CTCATCTGTTGCAAAGAAAGCGTTTGCTCGCTCGCTCGCTCGATTGCTCG
CTCACTTGCTCGATTGCTCGCTCGATTGCTCGATTGCTCGCTCGCTTGCT
CGATTGCTCGCTCGCTTGCTAGATTGCTCGCTCGCTTGCTCGATTGCTCG
CCCGGCGGCAAAGAGTATGATCAGAGCTCGAAAGCTTCCTACCCCCACTC
GTTCGTTCTCCAGTGATAATATTCAGACGAACGTTCATCTACGGTAAATG
AAGTCGCTCGGTCGTCTGCCTTGTTTCGGGCTTTCTGTGTACTCTCCGTG
TCGAGAAGGTTTCCACTCGTAGGCCTCCCCACTTCCTGGTTCTTGTGCTG
TACAGGCACGCACTTTGTATGTCCTATTTTGAGTTGTTGAATAATACTTT
AAACCACTACAGTATAATGTATACACAATTGCATGTACAATCAGCCTGTC
CGTGGGGATTTGGTATGTTTATTTTATTTTATTCCTCTCTTTTTTTAACC
TCCTCTCCTCCTGCTCCACCTTTCCCAAAATATGGCCACAGGGGATGGGT
TTCCTTTACGTTGCGTCTGGCCCAATGGTGCGCTCCAGCTACAAGGCCGG
CGAGTTCTTCCTCAAGACCGTCATCGAGCAGAGGAGGGCGGGACAGCAAG
CGGAAGCAGGCATTCCGAGCGGCGCCAAGCCCGAGGCACATCGTCACAGT
AGCCGAGACTTCGAGGCTGACGGGGTGGTCGTAACGGCTTCCTCCGCAGC
ATGATTCGTTTTTGTTACTGTAGTGTTGCCGAAACGGCCTCTGGGTGAAA
GGAGGAAGCGTGTGGGTTACAGCGTGGACCAGGCGCGGGGGGGAGGAGGG
AGGCGGATACGATCGAGGGGAGTAAAGGCGGGG
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig62:464822..472554+

>mRNA_P-littoralis_Contig62.102.1 ID=mRNA_P-littoralis_Contig62.102.1|Name=mRNA_P-littoralis_Contig62.102.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1311bp|location=Sequence derived from alignment at P-littoralis_Contig62:464822..472554+ (Pylaiella littoralis U1_48)
ATGATGTCTCGCTACGCTTGCCGTCAGGGCCGGATCATTCTGCAGCAAGC
CGTTCGCAGCGGCAGCAGGAGTAGCAGCAGTAGCAGCAGCAGCAGCAGTA
GCAGGAACACCGGCAGAGCACTTAGCAGTGCCGCCGCAGCAGCAACGGAT
GAAAGCGGAAGCCGGCTTGGTGCTCTCCGGAAGAAGCTCAGAGACGAGGA
GGAGTTGGCGGTGACTGGGGTGGAACTCCACGACTTCTCCTTTTCCGGGG
ATGTGTCCTACGGGACCGCTGTCCCGCGACGCACGCGAGATAAGACCGGC
AAGGTGATTCATCGCAAGCCCAACTGGCTCAAAGCCGTGCCCACGCAGGG
CGAGAACTACGAGCGGCTTCGCTCTACTGTGAGGGAGCTCGGCCTCGCCA
CCGTCTGCGAGGAGGCCAAGTGCCCCAACATCGGGGAGTGCTGGGGCGGG
GCGGAAGGCACCGCGACGGCCACGATCATGATCATGGGCGACACGTGCAC
GAGAGGGTGCAGCTTTTGCGCCGTCAAGACCAGCCGCGCACCTCCCCCGC
TGGACGCCGATGAGCCCGAAAAAGTTGCCAAGGCCGTCACTGACTGGGGC
TTGGGCTACGTTGTGCTGACGAGCGTCGACCGTGACGATTTGCCCGATCA
GGGGGCAGACCACTTCGCGAGCACGGTGCGAGGCTTGAAGCGGCGTGCCC
CCAAGCTCCTCGTGGAGTGCCTAGCGCCCGACTTCCGGGGCGACCTCAAG
CTGGCGGAGGAGGTGGCCCTGTCGGGGCTGGATGTGTTCGCGCACAATCT
CGAGACGGTGGAAAGGCTGCAGGGCCGCGTAAGGGACCACCGAGCGGGAT
ACAGGCAGAGCCTGTCAGTGCTCGAGCATGCCAAGAAGGTTACGGACGGA
AAGGTGATCACGAAGACATCGCTGATGCTCGGCGTCGGAGAGACCCCCTC
GGACGTCGAGGCGACCCTGAGAGACTTGAGGGCTGTGGGGTGCGACGTCG
TGACGTTCGGGCAGTACCTTCGCCCGAGCAAGCGGCACATGCCCATGCGG
GAATACGTCACTCCGGAGGCGTTTGCGGAGTGGCAGAGGGTCGCAGAGGG
GATGGGTTTCCTTTACGTTGCGTCTGGCCCAATGGTGCGCTCCAGCTACA
AGGCCGGCGAGTTCTTCCTCAAGACCGTCATCGAGCAGAGGAGGGCGGGA
CAGCAAGCGGAAGCAGGCATTCCGAGCGGCGCCAAGCCCGAGGCACATCG
TCACAGTAGCCGAGACTTCGAGGCTGACGGGGTGGTCGTAACGGCTTCCT
CCGCAGCATGA
back to top