mRNA_P-littoralis_Contig62.81.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig62.81.1 vs. uniprot
Match: D8LU98_ECTSI (VOC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LU98_ECTSI) HSP 1 Score: 607 bits (1564), Expect = 8.290e-211 Identity = 320/412 (77.67%), Postives = 354/412 (85.92%), Query Frame = 1
Query: 109 MKARCSTCSSARWKQLLLLGACGGLRVWQAAGFGLGARPAASLQQQQQHTATACSAVQVRMSESGATERSSGSSGGGVREEATDRGEFLRKSVTFIAGGSAAIAASVTAVASSPEAAGAIGDLYEFKDQARFAQHVTVQVPDMAAAIKFYVDGVGMKVLRTRAGPLFNNTVVGFGPEALEVPPSFLFGVSSPSAYGGHFTVELNSQKDAEGA---GEEDADLFYDPGNGVQFLQVAMDSYRISQVVKAGGIIESGYGYLQVLSPGGLRLRLLSGSRRDPPMFLAVKAKDMKRSIRWYTEIAGMAELPFPRAREAGSPFEPAQPKDSVFMAYEGEAFGVLLVPAAKGETINPGSVVSVAVLAEDVEKIAKALGGRVSVDSAGAGTRSVVVPDPDGYGLKFVEYSDWQKQLPRL 1335
MK R STC RW QLL+L CG +RVWQAAGFGLGARP+ +QQ+Q HTAT CSA QV MSES A++RSS G G E T RG+FLR S F+AGGSAAIAA+ TA A P AA AIGDLYEFKDQARFAQH TVQVPDMAAA+KFYVDGVGMKV+RTRAGPLFN TVVGFGPEALEVPPSF+FGVSS + YGGHFT+ELNSQK+ GA GEED D FYDPGNGVQFLQ+A+DSYRISQVVKAGGIIESGYGYLQVL+PGGLRL+LLSGSRRDPPMFLAVK KDMKRS++WYT++AGM + PFPRAREAGSPFEP QP SVFMAYEGEAFGV+L+PAAKG+ INPGSVVSVAVLAEDVEKIA++LGG+VSVDSA G +SV V DPDGYG+KFVEYSDW+ QLPRL
Sbjct: 1 MKTRSSTCRCVRWAQLLVLSTCGDIRVWQAAGFGLGARPSVPVQQKQ-HTAT-CSATQVLMSESQASDRSSSRRGEGGAEP-TGRGDFLRNSAAFLAGGSAAIAAATTAGAGFPSAAEAIGDLYEFKDQARFAQHATVQVPDMAAALKFYVDGVGMKVIRTRAGPLFNTTVVGFGPEALEVPPSFVFGVSSTNGYGGHFTLELNSQKEEAGAAEDGEEDVDFFYDPGNGVQFLQIAVDSYRISQVVKAGGIIESGYGYLQVLAPGGLRLKLLSGSRRDPPMFLAVKVKDMKRSVQWYTDVAGMTKFPFPRAREAGSPFEPEQPAGSVFMAYEGEAFGVVLIPAAKGDQINPGSVVSVAVLAEDVEKIAESLGGKVSVDSARGGGKSVAVADPDGYGVKFVEYSDWRGQLPRL 409
BLAST of mRNA_P-littoralis_Contig62.81.1 vs. uniprot
Match: A0A835YIX3_9STRA (VOC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIX3_9STRA) HSP 1 Score: 259 bits (663), Expect = 2.530e-76 Identity = 149/303 (49.17%), Postives = 196/303 (64.69%), Query Frame = 1
Query: 436 VASSPEAAGAIGDLYEFKDQARFAQHVTVQVPDMAAAIKFYVDGVGMKVLRTRAGPLFNN--TVVGFGPEALEVPPSFLFGVSSPSAYGGHFTVELNSQKDAEGAGEEDADLFYDPGNGVQFLQVAMDSYRISQVVKAGGIIESGYGYLQVLSPGGLRLRLLSGSRRDPPMFLAVKAKDMKRSIRWYTEIAGMAELPFPRAREA-GSPFEPAQPKDSVFMAYEGEAFGVLLVPAAKGET--INPGSVVS-VAVLAEDVEKIAKALGGRVSVDSAGAGTRSVVVPDPDGYGLKFVEYSDWQKQL 1326
VA SPE AIG+L E Q RF QH V VPD+ AAI+FY +G+GM+V+R+RA N T V +GPE L VP + GVSS +AYGGHF++EL + GE FYDPGNGVQ++Q+A+D+YRIS+V+ AGG + GYG GL++ L SG RRDP MF+A+K D+K+S++WYT++ GM++ P+P+AREA S FEP QPK SVFM Y+ + GVLL+P K + I GS S +AVLA DVE K +G + + G T VV DPDGY VEY D+ ++L
Sbjct: 86 VAGSPEGCNAIGELPETLSQKRFVQHAVVNVPDIEAAIRFYTEGLGMRVVRSRADTSANTNTTFVAYGPEQLTVPKDWAPGVSSFAAYGGHFSLELVGPLNPPADGELP---FYDPGNGVQYIQIAVDTYRISKVIAAGGEVIFGYG--------GLKINLFSGVRRDPMMFVALKVSDLKKSVQWYTDVLGMSQFPYPKAREAVDSVFEPKQPKGSVFMGYDEDGSGVLLIPKDKKDKAPIVVGSAYSKLAVLATDVEDEGKRVGAMYAGKAPGTSTSVAVVADPDGYTTVLVEYDDFAREL 377
BLAST of mRNA_P-littoralis_Contig62.81.1 vs. uniprot
Match: A0A4D9D405_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D405_9STRA) HSP 1 Score: 215 bits (547), Expect = 1.020e-59 Identity = 138/339 (40.71%), Postives = 198/339 (58.41%), Query Frame = 1
Query: 349 EATDRGEFLRKSVTFIAGGSAAIAASVT-AVASSPEAAGAIGDLYEFKDQARFAQHVTVQVPDMAAAIKFYVDGVGMKVLRTRAGPLFNNTVVGFGPEALEVPPSFLFGVSSPSAYGGHFTVELNSQKDAEGAGEEDADLFYDPGNGVQFLQVAMDSYRISQVVKAGGIIESGYGYLQVLSPGGLRLRLLSGSRRDPPMFLAVKAKDMKRSIRWYTEIAGMAELPFPRAREAGSPFEPAQPKDSVFMAYEGEAFGVLLVPAAKGET---INPGSVVS-VAVLAEDV-------EKIAKALGGRVSVDSAGAGTRSVVVPDP-DGYGLKFVEYSDWQKQL 1326
E DR L++ G + +S+T A S P AA AIG+L E+ RF QH+ + VPDMAAA+ FY+DG+ M+VLR+R N+T VG+GPE L+ P + GVSS S YG HF +ELN E E D + DPGN +LQ+A+ S R+S++ +AGG I+S YG++ V SPGGLR +++ G RRDP M LA+ D++++ +Y GM E P+P +R S +EP QPK S F+A+ + FG+LL+P K E + G VV +A+L DV + A + + + ++ G GT+ V DP G G+ VE D +K+L
Sbjct: 23 ELIDRQGLLQRVTVATTAG--VLGSSITGAFPSRPNAANAIGELPEWASNPRFTQHLVINVPDMAAALSFYIDGLQMQVLRSRLVGGQNSTFVGYGPETLKTPKGWYPGVSSFSMYGAHFALELNEVLKTE---EGDTPVL-DPGNAAAYLQLAVPSLRLSKLAEAGGKIKSAYGWVLVDSPGGLRHQVIVGMRRDPIMMLALNVPDVQKASHFYVNSLGMQEQPYPLSRIPESIYEPKQPKGSRFLAFNEDGFGILLLPLPKKEAKAGVRLGGVVDKLAILGTDVVGKGGAEDWKASGVDVKFAGEAPGIGTKVAVTQDPVTGLGVVLVEAEDLEKEL 355
BLAST of mRNA_P-littoralis_Contig62.81.1 vs. uniprot
Match: A0A0G4EHT2_VITBC (VOC domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EHT2_VITBC) HSP 1 Score: 204 bits (519), Expect = 3.320e-56 Identity = 124/303 (40.92%), Postives = 172/303 (56.77%), Query Frame = 1
Query: 466 IGDLYEFKDQARFAQHVTVQVPDMAAAIKFYVDGVGMKVLRTRAGPLFNNTV--VGFGPEALE---VPPSFLFGVSSPSAYGGHFTVELNSQKDAEGAGEEDADL-----FYDPGNGVQFLQVAMDSYRISQVVKAGGIIESGYGYLQVLSPGGLRLRLLSGSRRDPPMFLAVKAKDMKRSIRWYTEIAGMAELPFPRAR-EAGSPFEPAQPKDSVFMAYEGEAFGVLLVPA----AKGETINPGSVVS-VAVLAEDVEKIAKALGGRVSVDSAGAGTRSVVVPDPDGYGLKFVEYSDWQKQL 1326
+G L E ++ R+ QH V VP M A+ FY G+GM+V+RTR P N V VG+GPE L+ V F G+SS + YG HFT+EL ++ +D D Y+PGNGVQFLQ+A+ R+SQ+ + GG I YG+++V +PGGL LR++ G RRDP MF KD+ + +Y GM ELP+ +AR SP EP QP++S +M Y + FG+LLV AK I GSV +A+L+ +V + +L + G GT D GYGL VEY D++K+L
Sbjct: 1 MGTLPETQNLERYIQHAVVNVPKMDDALNFYTRGLGMRVIRTRTNPAKTNNVTFVGYGPETLDLKRVENGFRPGISSYNEYGAHFTLELIEKRVPPELKSDDEDAQPVVQAYEPGNGVQFLQIALPFLRVSQLAETGGNIRRAYGWIEVDAPGGLPLRIIIGERRDPFMFACFTVKDLSAAKSFYETRLGMRELPYQKARYNPDSPLEPKQPQESAYMGYSEDTFGLLLVQQDKKIAKKTPIEVGSVFDKLAILSRNVVEEGPSLNAGFTGPVPGIGTNVAAFKDAQGYGLVLVEYDDFEKEL 303
BLAST of mRNA_P-littoralis_Contig62.81.1 vs. uniprot
Match: A0A7S2UZ58_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ58_9STRA) HSP 1 Score: 196 bits (498), Expect = 8.570e-54 Identity = 112/268 (41.79%), Postives = 160/268 (59.70%), Query Frame = 1
Query: 406 SAAIAASVTAVASSPEAAGAIGDLYEFKDQARFAQHVTVQVPDMAAAIKFYVDGVGMKVLRTRAGPLFNNTVVGFGPEALEVPPSFLFGVSSPSAYGGHFTVELNSQKDAEGAGEEDADLFYDPGNGVQFLQVAMDSYRISQVVKAGGIIESGYGYLQVLSPGGLRLRLLSGSRRDPPMFLAVKAKDMKRSIRWYTEIAGMAELPFPRAREAGSPFEPAQPKDSVFMAYEGEAFGVLLVPAAKGETINPGSVVS-VAVLAEDVEKIAK 1206
S+AI SV + +IG+L EF D A+F QH+ V+V DM AA++F + G+ M VLRTR N T VG+GPE L P F+ GVSS + YGGHF++EL S E+ +PG +Q++Q+A + +++KAGGII GYGY V++P GL R+ RDP ++A+K KDMK+SI +Y ++ GM +L + R S FEP QPK SV M Y + +LL+PA + +TI G+V + +A++ VE I K
Sbjct: 12 SSAILGSVALSQGLSQPGWSIGELPEFSDDAKFIQHMVVRVEDMDAALEFCLKGLQMSVLRTRLVDGINGTFVGYGPEQLSPPEDFVPGVSSFARYGGHFSLELVSPTTPL---EQRKPFANNPGTALQYIQLAAPNLSFGKLIKAGGIITGGYGYADVIAPFGLPFRVFVADTRDPAQYIAMKVKDMKKSIAYYEKVLGMKKLSYEMLRVKDSSFEPIQPKGSVVMGYNENSCNILLIPATRQDTIEVGNVFAKLAIVTNGVEDIGK 276
BLAST of mRNA_P-littoralis_Contig62.81.1 vs. uniprot
Match: A0A5B8MYG2_9CHLO (Putative glyoxalase n=3 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MYG2_9CHLO) HSP 1 Score: 121 bits (304), Expect = 8.160e-26 Identity = 93/305 (30.49%), Postives = 154/305 (50.49%), Query Frame = 1
Query: 502 FAQHVTVQVPDMAAAIKFYVDGVGMKVLRTRAGPLFNNTVVGFGPEALEVPPSFLFGVSSPSAYGGHFTVELNSQKDAEGAGEEDADLFYDPGNGVQFLQVAM-DSYRISQVVKAGGIIESGYGYLQVLSPGGLRLRLLSGSRRDPPMFLAVKAKDMKRSIRWYTEIAGMAELPFPRAREAGSPFEPAQPKDSVFMAYEG--EAFGVLLVPAAKGETINPGSVVSVAVLAEDVEK-----IAKALGGRVSVDSAGAGTRSVVVPDP-DGYGLKFVEYSDWQKQLPRLA*V-VHMKVSGFLLRSRD 1386
F QH ++V D+ ++KF+ G+GMKV RTR N V FGPE L +A GG F +EL E+ D N QF Q A+ +S R+++V +GG I G+GY ++ +P G ++ + +RRDP + V D+ + ++Y + GMA +E G FEPA+ K SV M Y E G+LLVP + + + + +AVL +DV + +A L + + + G G V + P +G L FV+Y+D++++ P+ A + + ++ ++ ++D
Sbjct: 154 FLQHAVLEVKDLDKSVKFWTQGLGMKVNRTRG----NQAFVSFGPETLT------------AADGGKFALEL----------VENPSTTQD--NSGQFFQFALSNSLRVNRVANSGGDITFGFGYFEITAPDGYKVVVYIENRRDPFDLVGVYVNDVDAAAKYYERVFGMAADRSYGDKEVGR-FEPARIKGSVLMTYGAADENTGILLVPKSSSKEASSVQSIKIAVLDKDVNERKEKLVAAGLTPKFTGEVPGTGGTKVSLAVPREGVPLVFVDYNDFEREQPKPAVLTIGEEIQAYVAMAKD 429
BLAST of mRNA_P-littoralis_Contig62.81.1 vs. uniprot
Match: A0A7S2H0Q2_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2H0Q2_9EUKA) HSP 1 Score: 100 bits (248), Expect = 4.590e-19 Identity = 74/238 (31.09%), Postives = 118/238 (49.58%), Query Frame = 1
Query: 502 FAQHVTVQVPDMAAAIKFYVDGVGMKVLRTRAGPLFNNTVVGFGPEALEVPPSFLFGVSSPSAY-GGHFTVELNSQKDAEGAGEEDADLFYDPGNGVQFLQVAMDSYRISQVVKAGGIIESGYGYLQVLSPGGLRLRL-LSGSRRDPPMFLAVKAKDMKRSIRWYTEIAGMAELPFPRAR-------------EAGSPFEPAQPKDSVFMAYEGEAF--GVLLVPAAKG-ETINPGSV 1161
F + + + VP++ A++F+ G G +L +R N T +GFGP+ SP A G F +EL E A F+ + +Q++Q+AM +R+SQVV GG I S YG+ +V++PGGL LR+ + +RRDP F+A++ +++ + + Y E+ GM L + E EP + SV M + GVLL+P KG + ++PG V
Sbjct: 105 FCRGLRIGVPNLDEAVRFWTSGCGALLLDSRMIDGHNVTTIGFGPQ-------------SPRAEDGAKFALEL----------VEGAPTFFGDDSPLQYIQLAMPIFRLSQVVAYGGKILSAYGWTEVIAPGGLPLRVRIEETRRDPFEFIALRTSNLRAATKHYEEVLGMNTLSETSRKKFKLESINQNTIFENSDALEPEREAGSVLMTFGAAELTTGVLLLPPTKGRKALDPGFV 319
BLAST of mRNA_P-littoralis_Contig62.81.1 vs. uniprot
Match: A0A0M0JPX6_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JPX6_9EUKA) HSP 1 Score: 100 bits (248), Expect = 5.140e-19 Identity = 84/294 (28.57%), Postives = 134/294 (45.58%), Query Frame = 1
Query: 502 FAQHVTVQVPDMAAAIKFYVDGVGMKVLRTRAGPLFNNTVVGFGPEALEVPPSFLFGVSSPSAYGGHFTVELNSQKDAEGAGEEDADLFYDPGNGVQFLQVAMDSYRISQVVKAGGIIESGYGYLQVLSPGGLRLRL-LSGSRRDPPMFLAVKAKDMKRSIRWYTEIAGMAELPFPRAR------------EAGSPFEPAQPKDSVFMAYEGEAF--GVLLVPAAKGETINPGSVVSVAVLAEDVEKIAKALGGRVSVDSAGAGTRSVVVPDPDGYGLKFVEYSDWQKQLPRLA 1338
F Q + + VPDM A+ F+ G G VL T+ N T +GFGP+++ G F +E+ E ++ G +Q++Q+A+ +R+SQV+K GG I+S YG+ Q+ +PGGL LR+ + SRRDP F+A++ +K S+ Y E G+ ++ R E +EP + S+ M+Y + GVLL+P KG + GS A+ + + +G VD P PDG F +++ L + A
Sbjct: 105 FYQSMRIGVPDMDKAVTFWTKGCGALVLDTKLVNGVNVTRIGFGPQSIRRDD------------GAKFALEM----------VEGPSTSFETGGVLQYVQLAIPIFRLSQVMKNGGDIQSAYGWTQLTAPGGLPLRVHIDESRRDPFEFVALRTSSLKSSVAHY-ESLGLRKVDEKSGRKVELSINKNTIFENSDAYEPDREVGSILMSYGDKKAETGVLLLPPLKGAKLITGSN---GAAADPMPPVMSFVGAPAIVDR----------PGPDGVLSVFTPIEEFEASLVKTA 362
BLAST of mRNA_P-littoralis_Contig62.81.1 vs. uniprot
Match: A0A8J5XKT4_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XKT4_DIALT) HSP 1 Score: 98.6 bits (244), Expect = 2.810e-18 Identity = 66/189 (34.92%), Postives = 101/189 (53.44%), Query Frame = 1
Query: 505 AQHVTVQVPDMAAAIKFYVDGVGMKVLRT-RAGPL-FNNTVVGFGPEALEVPPSFLFGVSSPSAYGGHFTVELNSQKDAEGAGEEDADLFYDP-----GNGVQFLQVAMDSYRISQVVKAGGIIESGYGYLQVLSPGGLRLRLLSGSRRDPPMFLAVKAKDMKRSIRWYTEIAGMAELPFPRAREAGSP 1050
A + V+VPD+AAA +F++DG+ M LR+ R GP VVG+G E L+ GG F++EL A A L D + ++Q+ + + RIS +V++GG IES YGY++V SPGGL +R+++ RRDP F+A++ D++ + +Y GM +P P R P
Sbjct: 126 AASLRVRVPDLAAARRFWLDGLKMSELRSSRVGPDGAEGIVVGYGREGLDEDD------------GGKFSLELVQ---ASARAPAPARLALDAPDAEAAGALLYVQLRVPNVRISGLVQSGGAIESAYGYVEVTSPGGLAVRVITAPRRDPVEFVALRVPDVEAAAAYYERAFGMRRIPSPPRRTERGP 299
BLAST of mRNA_P-littoralis_Contig62.81.1 vs. uniprot
Match: A0A7S0IK92_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IK92_9EUKA) HSP 1 Score: 96.3 bits (238), Expect = 1.310e-17 Identity = 86/279 (30.82%), Postives = 134/279 (48.03%), Query Frame = 1
Query: 490 DQARFAQHVTVQVPDMAAAIKFYVDGVGMKVLRTRAGPLFNNTVVGFGPEALEVPPSFLFGVSSPSAYGGHFTVELNSQKDAEGAGEEDADLFYDPGNGVQFLQVAMDSYRISQVVKAGGIIESGYGYLQVLSPGGLRLRL-LSGSRRDPPMFLAVKAKDMKRSIRWYTEIAGMAELPFPRAR---------EAGSPFEPAQPKDSVFMAY-EGEAF-GVLLVP--AAKGETINPGSVVSVAVLAEDVEKIAKALGGRVSVDSAGAG-TRSVVVPDPDG 1281
+++ F Q + V V D+ A+ F+ +G+G V TR N TVVGFGPE+L + G F+VEL S + G+ +Q++Q+AM +R+SQ + GG I+S YG+ +++PGG LR+ + +RRDP F A++ ++K ++R + A PF + + E FEP + + M+Y + EA GVLL+P A K ++P + + V + S GAG T S VV PDG
Sbjct: 129 ERSHFLQRLAVPVDDIEGALNFWRNGLGALVRSTRIVDGRNVTVVGFGPESLR------------AVDGAKFSVELVSAPTSV------------EGSQLQYIQLAMPVFRLSQAMAYGGDIKSAYGWTDLVAPGGTPLRVRIDETRRDPFEFAALRVSNLKAAVRHFEAFGMSAGEPFGKRKLSLLGNTAFEDRDAFEPDRELGATLMSYGDPEASTGVLLLPPLARKAVPLSPETRLFV-------------------IGSPGAGGTSSSVVLSPDG 364 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig62.81.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig62.81.1 >prot_P-littoralis_Contig62.81.1 ID=prot_P-littoralis_Contig62.81.1|Name=mRNA_P-littoralis_Contig62.81.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=411bp MKARCSTCSSARWKQLLLLGACGGLRVWQAAGFGLGARPAASLQQQQQHTback to top mRNA from alignment at P-littoralis_Contig62:333135..335931- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig62.81.1 ID=mRNA_P-littoralis_Contig62.81.1|Name=mRNA_P-littoralis_Contig62.81.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2797bp|location=Sequence derived from alignment at P-littoralis_Contig62:333135..335931- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig62:333135..335931- >mRNA_P-littoralis_Contig62.81.1 ID=mRNA_P-littoralis_Contig62.81.1|Name=mRNA_P-littoralis_Contig62.81.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1233bp|location=Sequence derived from alignment at P-littoralis_Contig62:333135..335931- (Pylaiella littoralis U1_48)back to top |