mRNA_P-littoralis_Contig61.10.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig61.10.1 vs. uniprot
Match: A0A6H5L135_9PHAE (Uncharacterized protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L135_9PHAE) HSP 1 Score: 198 bits (504), Expect = 1.820e-57 Identity = 100/160 (62.50%), Postives = 116/160 (72.50%), Query Frame = 3
Query: 687 WVTLMAPSKYPGDVDDAAFSEMLESVRKD-ECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGISVFKENVDWAGSAGLHDPKDHAPDTDFTSVGPRPATDPEEYLF-----------NPQHAKLKGQLIESFAYRKKNNDVV*LPTP 1130
WVTL+APSKYP + +D AFS LESVRKD ECFF ILKGRFRILKLRL Y +EDIDNIF TCCILHNMLH+FDG+ VF+E+VDW GSAGLHDP DH P TDFTS+G +E +P H +LK QLIESF+YRK++ND+ L P
Sbjct: 12 WVTLIAPSKYPANSEDTAFSRTLESVRKDVECFFDILKGRFRILKLRLGYRSKEDIDNIFSTCCILHNMLHTFDGMDVFEEDVDWVGSAGLHDPWDHDPLTDFTSIGSTGKLSEKEGGXXXXESSETIDQHPAHRELKKQLIESFSYRKRHNDITWLSRP 171
BLAST of mRNA_P-littoralis_Contig61.10.1 vs. uniprot
Match: A0A6H5JQM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM6_9PHAE) HSP 1 Score: 196 bits (499), Expect = 1.430e-55 Identity = 104/164 (63.41%), Postives = 115/164 (70.12%), Query Frame = 3
Query: 687 WVTLMAPSKYPGDVDDAAFSEMLESVRKD-ECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGISVFKENVDWAGSAGLHDPKDHAPDTDFTSVGPR-----PATDPEEYLF---------NPQHAKLKGQLIESFAYRKKNNDVV*LPTPK 1133
WVTL+APSKYP D AFS LESVRKD ECFFGILKGRFRILKLR+ YH RE IDNIFFTCCILHNMLH+FDG+ VF EN DW GSAG HD +H P TD+TSVG + P EE +P HA+LK QLIESFA+RKK ND+ L PK
Sbjct: 94 WVTLIAPSKYPQSNKDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTFDGLDVFDENTDWTGSAGHHDAWEHDPLTDYTSVGSKGVLLLPKEGEEEECGEGGHVRKERHPDHAELKRQLIESFAFRKKINDITWLSRPK 257
BLAST of mRNA_P-littoralis_Contig61.10.1 vs. uniprot
Match: A0A6H5K5C1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5C1_9PHAE) HSP 1 Score: 201 bits (512), Expect = 8.630e-55 Identity = 100/160 (62.50%), Postives = 118/160 (73.75%), Query Frame = 3
Query: 687 WVTLMAPSKYPGDVDDAAFSEMLESVRKD-ECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGISVFKENVDWAGSAGLHDPKDHAPDTDFTSVGPRPATDPEEYLF-----------NPQHAKLKGQLIESFAYRKKNNDVV*LPTP 1130
WVTL+APSKYP + +D AFS LESVRKD ECFFGILKGRFRILKLRL Y ++DIDNIF+TCCILHNMLH+FDG+ VF+E+VDW GSAGLHDP DH P TDFTS+G +E +P H +LK QLIESF+YRK++ND+ L P
Sbjct: 333 WVTLIAPSKYPANSEDTAFSRTLESVRKDVECFFGILKGRFRILKLRLGYRSKKDIDNIFYTCCILHNMLHTFDGMDVFEEDVDWVGSAGLHDPWDHDPLTDFTSIGSTGKLSEKEGGXXXXESSETIDQHPAHRELKKQLIESFSYRKRHNDITWLSRP 492
BLAST of mRNA_P-littoralis_Contig61.10.1 vs. uniprot
Match: A0A6H5JMK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMK5_9PHAE) HSP 1 Score: 184 bits (468), Expect = 1.860e-51 Identity = 94/145 (64.83%), Postives = 106/145 (73.10%), Query Frame = 3
Query: 687 WVTLMAPSKYPGDVDDAAFSEMLESVRKD-ECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGISVFKENVDWAGSAGLHDPKDHAPDTDFTSVGPRPATDPEEYLF-----------NPQHAKLKGQLIESF 1085
WVTL+APSKYP + +D AFS LESVRKD ECFFGILKGRFRILKLRL Y +EDIDNIF TCCILHNMLH+FDG+ VF+E+VDW GSAGLHDP DH P TDFTS+G +E +P H +LK QLIESF
Sbjct: 2 WVTLIAPSKYPANSEDTAFSRTLESVRKDVECFFGILKGRFRILKLRLGYRSKEDIDNIFSTCCILHNMLHTFDGMDVFEEDVDWVGSAGLHDPWDHDPLTDFTSIGSTGKLSEKEGGXXXXESSETIDQHPAHRELKKQLIESF 146
BLAST of mRNA_P-littoralis_Contig61.10.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE) HSP 1 Score: 172 bits (435), Expect = 5.690e-45 Identity = 93/163 (57.06%), Postives = 109/163 (66.87%), Query Frame = 3
Query: 687 WVTLMAPSKYPGDVDDAAFSEMLESVRKDECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGISVFKENVDWAGSAGLHDPKDHAPDTDFTSVGPR----PATDPEEYLF----------NPQHAKLKGQLIESFAYRKKNNDVV*LPTPK 1133
WVTL+APSKYP +D AFS LESVRKD G FRILKLR+ YH RE +DNIFFTCCILHNMLH+FDG+ VF+EN DW GSAG HD +H P TD+TSVG + P + E+ +P HA+LK QLIESFA+RKK ND+ L PK
Sbjct: 213 WVTLIAPSKYPQRNEDTAFSRDLESVRKDV-------GCFRILKLRMPYHKREYVDNIFFTCCILHNMLHTFDGLDVFEENTDWTGSAGHHDAWEHDPLTDYTSVGSKGVLLPPKEGEKAECGEGGHVRKERHPDHAELKRQLIESFAFRKKINDITWLSRPK 368
BLAST of mRNA_P-littoralis_Contig61.10.1 vs. uniprot
Match: A0A6H5JTC6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTC6_9PHAE) HSP 1 Score: 165 bits (417), Expect = 7.690e-44 Identity = 82/144 (56.94%), Postives = 102/144 (70.83%), Query Frame = 3
Query: 687 WVTLMAPSKYPGDVDDAAFSEMLESVRKD-ECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGISVFKENVDWAGSAGLHDPKDHAPDTDFTSVGPRPAT-DPEEYLFNPQHAKLKGQLIESFAYRKKNNDV 1112
WVTL+ PSKYP D +D AFS+ LESVRKD ECFFGI+KG FRILKL + YH +EDIDN+FFTCCILHNMLHS+D S +E +WAG+AGLH+ +H P D +SVG + ++ E+ + QLI SF YRK ND+
Sbjct: 94 WVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGLFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAKGSSASTEDVEVESGFNTRRKQLIASFVYRKSKNDI 237
BLAST of mRNA_P-littoralis_Contig61.10.1 vs. uniprot
Match: A0A6H5KEB6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEB6_9PHAE) HSP 1 Score: 173 bits (439), Expect = 1.870e-43 Identity = 102/221 (46.15%), Postives = 117/221 (52.94%), Query Frame = 3
Query: 687 WVTLMAPSKYPGDVDDAAFSEMLESVRKD----------------------------------------------------------ECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGISVFKENVDWAGSAGLHDPKDHAPDTDFTSVGPR----PATDPEEYLF----------NPQHAKLKGQLIESFAYRKKNNDVV*LPTPK 1133
WVTL+APSKYP +D AFS LESVRKD ECFFGILKGRFRILKLR+ YH RE IDNIFFTCCILHNMLH+FDG+ VF+EN DW GSAG HD +H P TD+TSVG + P + EE +P HA+ K LIESFA+RKK ND++ L PK
Sbjct: 415 WVTLIAPSKYPQSNEDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTGGXFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTFDGLDVFEENTDWTGSAGHHDAWEHDPLTDYTSVGSKGVLLPPKEGEEEECGEGGHVRKERHPYHAESKRHLIESFAFRKKINDIIWLSRPK 635
BLAST of mRNA_P-littoralis_Contig61.10.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 167 bits (424), Expect = 2.280e-42 Identity = 83/144 (57.64%), Postives = 103/144 (71.53%), Query Frame = 3
Query: 687 WVTLMAPSKYPGDVDDAAFSEMLESVRKD-ECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGISVFKENVDWAGSAGLHDPKDHAPDTDFTSVGPRPAT-DPEEYLFNPQHAKLKGQLIESFAYRKKNNDV 1112
WVTL+ PSKYP D +D AFS+ LESVRKD ECFFGI+KGRFRILKL + YH +EDIDN+FFTCCILHNMLHS+D S +E +WAG+AGLH+ +H P D +SVG + ++ E+ + QLI SF YRK ND+
Sbjct: 335 WVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAKGSSASTEDVEVESGFNTRRKQLIASFVYRKSKNDI 478
BLAST of mRNA_P-littoralis_Contig61.10.1 vs. uniprot
Match: A0A6H5JZL5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZL5_9PHAE) HSP 1 Score: 147 bits (372), Expect = 2.340e-38 Identity = 78/151 (51.66%), Postives = 96/151 (63.58%), Query Frame = 3
Query: 669 LVPNQHWVTLMAPSKYPGDVDDAAFSEMLESVRKD-ECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGISVFKENVDWAGSAGLHDPKDHAPDTDFTSVGPRPATDPEEYLFNPQHAKLKGQLIESFAYRKKNN-DVV 1115
L + +W L+ PSKYP +D F + LESVRKD ECFFGILKGRFRILKL +AY +E IDN+FFTCCILHNMLH+FDG+ EN +W SAG+ P+ D SVG + D + H K QL SFAYRKK+ D++
Sbjct: 12 LTASNNWQILIEPSKYPLSENDLLFLKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWISSAGVGATLATEPEADCGSVGTKDVNDQPQLEIG--HTVRKRQLTTSFAYRKKHKKDII 160
BLAST of mRNA_P-littoralis_Contig61.10.1 vs. uniprot
Match: A0A6H5L7R0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7R0_9PHAE) HSP 1 Score: 147 bits (372), Expect = 6.100e-38 Identity = 80/158 (50.63%), Postives = 103/158 (65.19%), Query Frame = 3
Query: 663 CRLVPN-----QHWVTLMAPSKY-PGDVDDAAFSEMLESVRKD-ECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGISVFKENVDWAGSAGLHDPKDHAPDTDFTSVGPRPAT-DPEEYLFNPQHAKLKGQLIESFAYRKKNNDV 1112
CRL P+ Q + P+ P ++D AFS+ LESVRKD ECFFGI+KGRFRILKL + YH +EDIDN+FFTCCILHNMLHS+D S +E +WAG+AGLH+ +H P D +SVG + ++ E+ + QLI SF YRK ND+
Sbjct: 35 CRLTPSLTPFSQPRIFCALPASLAPLMLNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAKGSSASTEDVEVESGFNTRRKQLIASFVYRKSKNDM 192 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig61.10.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig61.10.1 >prot_P-littoralis_Contig61.10.1 ID=prot_P-littoralis_Contig61.10.1|Name=mRNA_P-littoralis_Contig61.10.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=140bp MAPSKYPGDVDDAAFSEMLESVRKDECFFGILKGRFRILKLRLAYHCREDback to top mRNA from alignment at P-littoralis_Contig61:132215..133877+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig61.10.1 ID=mRNA_P-littoralis_Contig61.10.1|Name=mRNA_P-littoralis_Contig61.10.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1663bp|location=Sequence derived from alignment at P-littoralis_Contig61:132215..133877+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig61:132215..133877+ >mRNA_P-littoralis_Contig61.10.1 ID=mRNA_P-littoralis_Contig61.10.1|Name=mRNA_P-littoralis_Contig61.10.1|organism=Pylaiella littoralis U1_48|type=CDS|length=420bp|location=Sequence derived from alignment at P-littoralis_Contig61:132215..133877+ (Pylaiella littoralis U1_48)back to top |