mRNA_P-littoralis_Contig609.44.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig609.44.1 vs. uniprot
Match: A0A6H5JTI5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTI5_9PHAE) HSP 1 Score: 84.0 bits (206), Expect = 2.150e-18 Identity = 35/57 (61.40%), Postives = 42/57 (73.68%), Query Frame = 3
Query: 84 RSGEKVSAPSRGLVATWVKEVWEGISERTIPSCFKVCGLTLNLDGSEDHAWCTSTFG 254
RSG K+ P RG+V+TW KE WE I+ T+ +CFK+CGLTL LDG EDHAWC FG
Sbjct: 108 RSG-KLKPPERGVVSTWCKEAWESINPETVKTCFKICGLTLALDGGEDHAWCQHNFG 163
BLAST of mRNA_P-littoralis_Contig609.44.1 vs. uniprot
Match: A0A6H5KQK9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQK9_9PHAE) HSP 1 Score: 86.3 bits (212), Expect = 3.690e-18 Identity = 37/57 (64.91%), Postives = 43/57 (75.44%), Query Frame = 3
Query: 84 RSGEKVSAPSRGLVATWVKEVWEGISERTIPSCFKVCGLTLNLDGSEDHAWCTSTFG 254
RSG K+ P RG+V+TW KE WE I+ T+ SCFK+CGLTL LDGSEDHAWC FG
Sbjct: 205 RSG-KLKPPERGVVSTWCKEAWESITPETVKSCFKICGLTLALDGSEDHAWCDHDFG 260
BLAST of mRNA_P-littoralis_Contig609.44.1 vs. uniprot
Match: A0A6H5J8R4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8R4_9PHAE) HSP 1 Score: 85.5 bits (210), Expect = 6.500e-18 Identity = 36/57 (63.16%), Postives = 43/57 (75.44%), Query Frame = 3
Query: 84 RSGEKVSAPSRGLVATWVKEVWEGISERTIPSCFKVCGLTLNLDGSEDHAWCTSTFG 254
RSG K+ P RG+V+TW KE WE I+ T+ +CFK+CGLTL LDGSEDHAWC FG
Sbjct: 167 RSG-KLKPPERGIVSTWCKEEWESITPETVKTCFKICGLTLALDGSEDHAWCAHNFG 222
BLAST of mRNA_P-littoralis_Contig609.44.1 vs. uniprot
Match: A0A6H5K0T0_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0T0_9PHAE) HSP 1 Score: 83.2 bits (204), Expect = 7.380e-18 Identity = 32/53 (60.38%), Postives = 40/53 (75.47%), Query Frame = 3
Query: 96 KVSAPSRGLVATWVKEVWEGISERTIPSCFKVCGLTLNLDGSEDHAWCTSTFG 254
K+ P RG+V+TW KE WE I+ +T+ +CFK+CGLTL LDG EDHAWC FG
Sbjct: 67 KLKPPERGVVSTWCKEAWESITPKTVKTCFKICGLTLALDGREDHAWCEHNFG 119
BLAST of mRNA_P-littoralis_Contig609.44.1 vs. uniprot
Match: A0A6H5JBJ7_9PHAE (DDE-1 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBJ7_9PHAE) HSP 1 Score: 84.0 bits (206), Expect = 8.210e-18 Identity = 35/57 (61.40%), Postives = 43/57 (75.44%), Query Frame = 3
Query: 84 RSGEKVSAPSRGLVATWVKEVWEGISERTIPSCFKVCGLTLNLDGSEDHAWCTSTFG 254
RSG K+ P RG+V+TW K+ WE I+ T+ +CFK+CGLTL LDGSEDHAWC FG
Sbjct: 108 RSG-KLKPPERGVVSTWCKKAWESITPETVKTCFKICGLTLALDGSEDHAWCEHNFG 163
BLAST of mRNA_P-littoralis_Contig609.44.1 vs. uniprot
Match: A0A6H5JN68_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN68_9PHAE) HSP 1 Score: 85.5 bits (210), Expect = 1.460e-17 Identity = 36/57 (63.16%), Postives = 43/57 (75.44%), Query Frame = 3
Query: 84 RSGEKVSAPSRGLVATWVKEVWEGISERTIPSCFKVCGLTLNLDGSEDHAWCTSTFG 254
RSG K+ P RG+V+TW KE WE I+ T+ +CFK+CGLTL LDGSEDHAWC FG
Sbjct: 498 RSG-KLKPPERGVVSTWCKEAWESITPETVKTCFKICGLTLALDGSEDHAWCEHNFG 553
BLAST of mRNA_P-littoralis_Contig609.44.1 vs. uniprot
Match: A0A6H5KRI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRI4_9PHAE) HSP 1 Score: 80.9 bits (198), Expect = 2.610e-17 Identity = 32/57 (56.14%), Postives = 43/57 (75.44%), Query Frame = 3
Query: 84 RSGEKVSAPSRGLVATWVKEVWEGISERTIPSCFKVCGLTLNLDGSEDHAWCTSTFG 254
RSG K+ P RG+V+TW KE WE ++ T+ +CFK+CGLTL LDG+++HAWC FG
Sbjct: 26 RSG-KLKPPERGVVSTWCKEAWESVTSETVKTCFKICGLTLALDGNKNHAWCKHNFG 81
BLAST of mRNA_P-littoralis_Contig609.44.1 vs. uniprot
Match: A0A6H5KT06_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT06_9PHAE) HSP 1 Score: 82.8 bits (203), Expect = 3.260e-17 Identity = 35/57 (61.40%), Postives = 42/57 (73.68%), Query Frame = 3
Query: 84 RSGEKVSAPSRGLVATWVKEVWEGISERTIPSCFKVCGLTLNLDGSEDHAWCTSTFG 254
RSG K+ P RG+V+TW KE WE I+ T+ +CFK+CGLTL LDGSEDHAWC G
Sbjct: 205 RSG-KLKPPERGVVSTWCKEAWESITPETVKTCFKICGLTLALDGSEDHAWCEHNVG 260
BLAST of mRNA_P-littoralis_Contig609.44.1 vs. uniprot
Match: A0A6H5KII4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KII4_9PHAE) HSP 1 Score: 83.2 bits (204), Expect = 7.970e-17 Identity = 35/57 (61.40%), Postives = 42/57 (73.68%), Query Frame = 3
Query: 84 RSGEKVSAPSRGLVATWVKEVWEGISERTIPSCFKVCGLTLNLDGSEDHAWCTSTFG 254
RSG K+ P RG+V+TW K WE I+ T+ +CFK+CGLTL LDGSEDHAWC FG
Sbjct: 257 RSG-KLKPPERGVVSTWCKGAWESITPETVKTCFKICGLTLALDGSEDHAWCAHNFG 312
BLAST of mRNA_P-littoralis_Contig609.44.1 vs. uniprot
Match: A0A6H5JCV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCV1_9PHAE) HSP 1 Score: 82.8 bits (203), Expect = 1.250e-16 Identity = 36/57 (63.16%), Postives = 42/57 (73.68%), Query Frame = 3
Query: 84 RSGEKVSAPSRGLVATWVKEVWEGISERTIPSCFKVCGLTLNLDGSEDHAWCTSTFG 254
RSG KV P R +V+TW KE WE I+ T+ +CFK+CGLTL LDGSEDHAWC FG
Sbjct: 404 RSG-KVKPPEREVVSTWCKESWESITPETVKTCFKICGLTLALDGSEDHAWCEHNFG 459 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig609.44.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig609.44.1 >prot_P-littoralis_Contig609.44.1 ID=prot_P-littoralis_Contig609.44.1|Name=mRNA_P-littoralis_Contig609.44.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=46bp DRGRLNSRLSIFAILAGWRLIIHEVSSGARGRRSPRRAGGWSRRG*back to top mRNA from alignment at P-littoralis_Contig609:130552..135053+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig609.44.1 ID=mRNA_P-littoralis_Contig609.44.1|Name=mRNA_P-littoralis_Contig609.44.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4502bp|location=Sequence derived from alignment at P-littoralis_Contig609:130552..135053+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig609:130552..135053+ >mRNA_P-littoralis_Contig609.44.1 ID=mRNA_P-littoralis_Contig609.44.1|Name=mRNA_P-littoralis_Contig609.44.1|organism=Pylaiella littoralis U1_48|type=CDS|length=138bp|location=Sequence derived from alignment at P-littoralis_Contig609:130552..135053+ (Pylaiella littoralis U1_48)back to top |