mRNA_P-littoralis_Contig607.69.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig607.69.2 vs. uniprot
Match: A0A6H5KFB9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFB9_9PHAE) HSP 1 Score: 334 bits (856), Expect = 1.160e-100 Identity = 215/513 (41.91%), Postives = 282/513 (54.97%), Query Frame = 3
Query: 648 KNVTDFGAALTGAALTENTLTLANGTFFLGKSACRSKIFVRHCYNETFQLIRKSAAQRNDGTTPKIVIVGTPGIGKSVFGFFLLYQLRLEGRTVVFEREGSWYRFSDEGSVVGELSSFKTAGFFDDDNTWYLSDPKFRPEKFLNLPTVVFVSPKIGRTEEFLKMDMSEEFCMAPWGEDELMECRRLIFPEISEHEVQRRFDIVGGVARVVFGKVDFERYTQAMIDKKNRESVESLPLL---VANAGNDF---SNQDWGDKLLHLKPWPPTCSVSNVKSVTFASDFAAEVVGHALDAQGTRILPAIMASGFQDENTKRLVTGSVRGQLFEHFAHKEIAGSTDGGGTDGRTFGMKIFGNNSTRTKSTFQ-------FSEREAFKGTRIPGMLRPGVYYKPRNQNFPAIDGLGIDKGGDTLFFFQMKVADA------EGVNGTYVETYWETA-LESKGPSPKNFVFLYVVPSGSLSVWEKATKEVKALG--------VLEGLSKKSKSACKVGVME 2102
K + DFGA LT A + +NTL LA+GTFFLG+ RSK+F+R CY + +LI + DGT KIV+ GTPGIGKS FGF+L+Y LR +G TVV ER+ SW+RFSDEG VG SF+ AG+ ++TWYLSDP+ RP++ L LPTVV +SP+ R EF+K S F M PW DEL CR+ +FP + E +V+ RF VGGVAR VF D E+ Q + + S L LL ++ + +D S GD LLHL P P T SV FAS+FA V L + L + + + F + VT R FE AHK I GG ++ + F M+I S+ TKS + F + ++F+G P L G YY+P + NF A D G+D G TL+FFQ+K A + V T+VE YW A L P K FV+ +VVP G VW KAT+ + G V +G KSAC V V+E
Sbjct: 38 KALADFGAVLTKAVVADNTLELADGTFFLGEPRLRSKLFIRPCYKDLSELILEGVT---DGTMDKIVVTGTPGIGKSEFGFYLMYLLRGQGNTVVLERKDSWFRFSDEGVTVGYFYSFRRAGYLYGNSTWYLSDPEDRPKELLGLPTVVLLSPRKSRVNEFMKQPGSRRFYMPPWCLDELFRCRQAVFPHVPETDVRERFSKVGGVARAVF---DAEKLKQVCLKMQAAASNMDLNLLQQILSRSRDDVDQVSTDRSGDALLHLLPIPETGFEEF--SVDFASEFAHIVTLGELPKKEFAPLASFVGAAFAHDELGDKVTAE-RAAGFETIAHKTI-----GGASEQQWFDMRILSRASSSTKSVLEGNRLRLSFVKEQSFEGNSFPDALVAGTYYRPGSPNFAAADSFGVDSGSKTLWFFQVKSAGLPPKEGEKAVKWTHVEKYWRRAKLHHGAPIKKRFVYAFVVPEGK--VWNKATETCEEDGGRGDWRRNVTDGF----KSACDVCVIE 530
BLAST of mRNA_P-littoralis_Contig607.69.2 vs. uniprot
Match: D7FM56_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM56_ECTSI) HSP 1 Score: 202 bits (513), Expect = 3.910e-56 Identity = 134/156 (85.90%), Postives = 137/156 (87.82%), Query Frame = 3
Query: 3 SVLLLVCIAQACLAFVPSWTATFRSSRSQPPASTPAATTFSLSQPSGAICPLFGACGTCGAQIFYPVRGMTSLSAMSEGDEEEGGGDHHAREAADGSPAADE-RAVQDEIRGXXXXXXXXXXXXXXXXXXXXXXEAAIAGGSGYLGMTDPEALFRE 467
SVLLLV IAQACLAFVPSWTATFRSSRSQPPASTPAA TFSLSQPSG ICP+FGAC TCGAQ FYPV GMTSLSAMSEG EEEGGGDHHAREAADGSPAADE RAVQ XXXXXXXXXXXXXXXXXX EAAIAGGS YLGMTDPEAL ++
Sbjct: 7 SVLLLVGIAQACLAFVPSWTATFRSSRSQPPASTPAAATFSLSQPSGPICPVFGACDTCGAQFFYPVPGMTSLSAMSEGGEEEGGGDHHAREAADGSPAADEIRAVQXXXXXXXXXXXXXXXXXXXXXXXTDGIEAAIAGGSRYLGMTDPEALLKQ 162
BLAST of mRNA_P-littoralis_Contig607.69.2 vs. uniprot
Match: D7G8Q1_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Q1_ECTSI) HSP 1 Score: 201 bits (510), Expect = 2.050e-55 Identity = 146/241 (60.58%), Postives = 160/241 (66.39%), Query Frame = 3
Query: 210 MTSLSAMSEGDEEEGGGDHHAREAADGSPAADE-RAVQDEIRGXXXXXXXXXXXXXXXXXXXXXXEAAIAGGSGYLGMTDPEALFR------EKXXXXXXXXXXXXXXXXXL---ELLLKKEDRLSRIEQLRASDAPAVLHAWHARTSGAVFQPANKNVTDFGAALTGAALTENTLTLANGTFFLGKSACRSKIFVRHCYNETFQLIRKSAAQRNDGTTPKIVIVGTPGIGKSVFGFFLLY 902
MTSLSAMSEGDEEEGGGDH AREAAD PAADE RAVQD+IRG X EAAIAGGS YLGMTDPEAL + E+XXXXXXXXXXXXXXX L ELLLKKEDR SRIEQLRA++APA ANKNV+DF AALTGA +TE+TL LANGTFFLG S SK+F+RHCY E LI Q +V+ GTPGIGKS FG++LLY
Sbjct: 1 MTSLSAMSEGDEEEGGGDHDAREAADRIPAADEIRAVQDDIRGVERKXEDAEKETAEVVKKIDDIEAAIAGGSRYLGMTDPEALLKQLGRKEEQXXXXXXXXXXXXXXXRELLLNELLLKKEDRFSRIEQLRANNAPA----------------ANKNVSDFAAALTGAVVTEDTLELANGTFFLGNSDLGSKLFIRHCYKEMADLILSGKVQ-------DVVVTGTPGIGKSTFGYYLLY 218
BLAST of mRNA_P-littoralis_Contig607.69.2 vs. uniprot
Match: A0A6H5K1J0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1J0_9PHAE) HSP 1 Score: 186 bits (472), Expect = 1.510e-49 Identity = 101/114 (88.60%), Postives = 102/114 (89.47%), Query Frame = 3
Query: 633 FQPANKNVT-DFGAALTGAALTENTLTLANGTFFLGKSACRSKIFVRHCYNETFQLIRKSAAQRNDGTTPKIVIVGTPGIGKSVFGFFLLYQLRLEGRTVVFEREGSWYRFSDE 971
FQ A V+ DFGAALTGAALTENTLTLANGTFFLGKSACRSKIFVRHCYNETFQLIRKSAAQRNDGTTPKIVIVGT GIGKSVFGFFLLYQLRLEGRTVVFERE FS E
Sbjct: 51 FQRAKIEVSCDFGAALTGAALTENTLTLANGTFFLGKSACRSKIFVRHCYNETFQLIRKSAAQRNDGTTPKIVIVGTSGIGKSVFGFFLLYQLRLEGRTVVFERETVPRAFSFE 164
BLAST of mRNA_P-littoralis_Contig607.69.2 vs. uniprot
Match: A0A835Z6Q5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6Q5_9STRA) HSP 1 Score: 162 bits (410), Expect = 1.560e-38 Identity = 137/455 (30.11%), Postives = 208/455 (45.71%), Query Frame = 3
Query: 651 NVTDFGAALTGAALTENTLTLANGTFFLGKSACRSKIFVRHCYNETFQLIRKSAAQRNDGTTPKIVIVGTPGIGKSVFGFFLLYQLRLEGRTVVFEREGSWYRFSDE-GSVVGELSSFKTAGFFDDDNTWYLSDPKFRPEKFLNL--PTVVFVSPKIGRTEEFLKMDMSEEFCMAPWGEDELMECRRLIFPEISEHEVQRRFDIVGGVARVVFGKVDFERYTQAMIDKKNRESVESLPLLVANAGNDF-SNQDWGDKLLHLKPWPPTCSVSNVK-SVTFASDFAAEVVGHALDAQGTRILPAIMASGFQDENTKRLVT-GSVRGQLFEHFAHKEIAGSTDGGGTDGRTFGMKIFGNNSTRTKSTFQFSEREAFKGTRIPGMLR--PGVYYKPRNQNFPAIDGLGIDKGGDTLFFFQMKVADAEGVNGTYVETYWETALESKGPSPKNFVFLYVVP 1991
+V F AL+ A+ ++ L L +GT+F+G ++I++R CY E I+ A GT ++VI GTPGIGKS + + L+ LR G TVV++ +YRFS E + +FK AG + W+L DP E + T+VFVSP R + FLK + M W ++E+ CR+L+F + + VQ + GGV R V D + + + + L + NAG D S DK+LH+ C+ V + +AS +A + + A L A +AS + RL + ++RG +FE + H+ + +G F ++ + +TF F+ R + R+ + R GVYY PR N A D I G LF FQ+ VA GV E A + FV +VVP
Sbjct: 82 SVVTFWRALSRASDDDDCLALKDGTWFMGDYVRGNRIYIRSCYRELMDTIK---AMVTSGTR-RVVITGTPGIGKSCYALYWLWHLRRAGNTVVYQIGADFYRFSGELVQHADTIGAFKNAGGLWHPDVWFLCDPARDHEPYGGCLGVTLVFVSPSTERYKAFLKEPRATTRYMPVWSQEEVQRCRQLLFDHVPQSRVQDLLEQWGGVPRFVLQFADDDTQQAKLQQAIRKCATAGLRATILNAGEDAGSTAALSDKVLHM------CTADFVHVRLMWASQYAFDALCEAQGEASKGELRAFIAS------SARLPSLATLRGLVFEPYVHRLLG--------NGSCFEYRVL-EPAQHGVTTFNFAFRRSVTFARLRDIWRIEEGVYYAPRASNLSAGDSFAIIDG--VLFIFQITVAAEHGVKKAGTLDIVEAACGMSIGARPEFVLAFVVP 509
BLAST of mRNA_P-littoralis_Contig607.69.2 vs. uniprot
Match: A0A6H5KCR9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCR9_9PHAE) HSP 1 Score: 129 bits (323), Expect = 3.760e-31 Identity = 65/117 (55.56%), Postives = 82/117 (70.09%), Query Frame = 3
Query: 648 KNVTDFGAALTGAALTENTLTLANGTFFLGKSACRSKIFVRHCYNETFQLIRKSAAQRNDGTTPKIVIVGTPGIGKSVFGFFLLYQLRLEGRTVVFEREGSWYRFSDEGSVVGELSS 998
K + DFGA LT A + +NTL LA+GTFFLG+ RSK+F+R CY + +LI + DGT KIV+ GTPGIGKS FGF+L+Y LR +G TVV ER+G W+RFSD G VG+ S
Sbjct: 19 KALADFGAVLTKAVVADNTLELADGTFFLGEPRLRSKLFIRPCYKDLSELILEGVT---DGTMDKIVVTGTPGIGKSEFGFYLMYLLRGQGNTVVLERKGCWFRFSDGGVTVGDFYS 132
BLAST of mRNA_P-littoralis_Contig607.69.2 vs. uniprot
Match: D8LPP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPP1_ECTSI) HSP 1 Score: 126 bits (317), Expect = 5.790e-30 Identity = 97/150 (64.67%), Postives = 103/150 (68.67%), Query Frame = 3
Query: 189 IFYPVRGMTSLSAMSEGDEEEGGGDHHAREAADGSPAADE-RAVQDEIRGXXXXXXXXXXXXXXXXXXXXXXEAAIAGGSGYLGMTDPEALFRE--------------KXXXXXXXXXXXXXXXXXLELLLKKEDRLSRIEQLRASDAPA 593
+FYPVRGMT LSAMSEGDEEEGGGDHHAREAAD PAADE RAVQDEIRG EAAIAGG+ YLGMTDPEAL ++ XXXXXXXXXXXXXXXXX ELLLK EDRLSR EQ RA++APA
Sbjct: 1 MFYPVRGMTGLSAMSEGDEEEGGGDHHAREAADRLPAADEIRAVQDEIRGVERKIEDAEEETAEVVKKIDDIEAAIAGGARYLGMTDPEALLKQLEQLRRXXXXXXXXXXXXXXXXXXXXXXXXXXXELLLKTEDRLSRSEQFRANNAPA 150
BLAST of mRNA_P-littoralis_Contig607.69.2 vs. uniprot
Match: A0A836CG71_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG71_9STRA) HSP 1 Score: 136 bits (342), Expect = 4.660e-29 Identity = 136/483 (28.16%), Postives = 208/483 (43.06%), Query Frame = 3
Query: 636 QPANKNVTDFGAALTGAALTENT-LTLANGTFFLGKSACRSK-IFVRHCYNETFQLIRKSAAQRNDGTTPKIVIVGTPGIGKSVFGFFLLYQLRLEGRTVVFEREGSWYRFSDEGSVVGELSSFKTAGFFDDDNTWYLSDPKF---RPEKFLNLPTVVFVSPKIGRTEEFLKMDMSEEFCMAPWGEDELMECRRLIFPEISEHEVQRRFDIVGGVARVV--FGKVDFERYTQAMIDKKNRESVES-----LPLLVANAGNDFSN-QDWGDKLLHLKPWP-PTCSVSNVKSVTFASDFAAEVVGHALDAQGTRILPAIMASGFQDENTKRLVTGSVRGQLFEHFAHKEIAGSTDGGGTDGRTFGMKIFGNNSTRTKSTFQFSEREAFKGTRIPGM------------LRPGVYYKPRNQNFPAIDGLGIDKGGDTLFFFQMK-----VADAEGVNGTYVETYWETALESKGPSPKNFVFLYVVP 1991
+PA V +F L A E+ L L GT F G R K I+VR Y + + + S + KI+I G PG GKS+F + L+ L+L G+TV+++ +YRFS + G F GFFDD + WYLSDP P T+ F+SPK R EFLK ++ M PW EL CR+ +FP +S +V+R + GG R V + + F++ +K R V + L + A+ G + D D++L + P TC+V FA + E +G L A + G G+ G + E AH + G ++ + ++ K+ +R+ +P +RPGVY+ P ++NF AID + G TL+ FQ+ +A A+GV + +L K +V ++VVP
Sbjct: 196 EPAPMEVQEFWRCLVDAREDEHGFLRLTEGTHFPGNKNQRVKAIYVRQWYKDLQEEVL-SMTEPGPQHARKILITGRPGTGKSLFALYWLWLLKLAGKTVIYQANKWFYRFSGDTVWRGSERHFADMGFFDDPDCWYLSDPPAPAGTPWLDCEGITLAFMSPKKWRYNEFLKAPLATGVYMTPWTLSELQHCRQHLFPNLSVKQVRRLYIRWGGSPRYVLQYARNAFQQ------NKLQRSIVAATQPNRLAAVFASQGESSGDVDDVSDQVLEIVPTSFSTCTVRFTSPYVFAEIYKKEQQVLRQCVRGW--LAAALGGGS---------IGTTPGNMLEQLAHNVLC--------QGGSYKYVV-----SKFKAVVSKGKRKRNLNLHLPPTRPNLFEHLAELTVRPGVYFWPLSKNFKAIDSFVVIDG--TLYMFQITTDLTHIAGAKGVTDVVNKVRESCSL-------KRWVLVFVVP 638
BLAST of mRNA_P-littoralis_Contig607.69.2 vs. uniprot
Match: A0A836CEN6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEN6_9STRA) HSP 1 Score: 120 bits (300), Expect = 1.630e-25 Identity = 83/267 (31.09%), Postives = 122/267 (45.69%), Query Frame = 3
Query: 705 LTLANGTFFLGKSACRSKIFVRHCYNETFQLIRKSAAQRNDGTTPKIVIVGTPGIGKSVFGFFLLYQLRLEGRTVVFEREGSWYRFSDEGSVVGELSSFKTAGFFDDDNTWYLSDPKFRPEKFLNLPTVVFVSPKIGRTEEFLKMDMSEEFCMAPWGEDELMECRRLIFP------EISEHEVQRRFDIVGGVARVVFGKVDFERYTQAMIDKKNRESVESLPLLVANAGNDFSNQD-WGDKLLHLKPWPPTCSVSNVKSVTFASDF 1484
L L GT+F+G S I++R CY + I K A R ++VI GTPGIGK+ + F+ L+ LR GRTVV++ WYRF +V G +F AG+ DD + T+VFV+P+ R EFLK + + M W E+EL+ C L+F ++ + V+ F GGV R V + + + SV L + + G DKL+H+ TC K + +ASD+
Sbjct: 16 LKLPAGTWFMGNRDFGSAIYIRDCYCNLMEQINKLVAARR---VQRVVITGTPGIGKTCYAFYWLWHLRQTGRTVVYQLGPGWYRFCGATAVQGSRKAFLAAGYLDDP----AAXXXXXXXXXFGGITLVFVTPRWVRYHEFLKAPAATKRFMPVWSEEELLRCAELLFSGQDLERDVPQARVRELFRRWGGVPRYVLQYAHDDERQGTLTAAIHHCSVGDLHAAIRSTGEGTGTTVVLSDKLVHIH----TCGAFTSKRLMWASDY 271
BLAST of mRNA_P-littoralis_Contig607.69.2 vs. uniprot
Match: A0A372Q6T8_9GLOM (Crinkler domain-containing protein n=1 Tax=Rhizophagus sp. MUCL 43196 TaxID=1803374 RepID=A0A372Q6T8_9GLOM) HSP 1 Score: 123 bits (308), Expect = 3.660e-25 Identity = 102/405 (25.19%), Postives = 176/405 (43.46%), Query Frame = 3
Query: 705 LTLANGTFFLGKSACRSKIFVRHCYNETFQLIRKSAAQRNDGTTPKIVIVGTPGIGKSVFGFFLLYQLRLEGRTVVFEREGSWYR--FSDEGSVVGE-LSSFKTAGFFDDDNTWYLSDPKFRPEKFLNLPTVVFVSPKIGRTEEFLKMDMSEEFCMAPWGEDELMECRRLIFPEISEHEVQRRFDIVGGVARVVFGKVDFERYTQAMIDKKNRESVESLPLLVANAGNDFSNQDWGDKLLHLKPWPPTCSVSNV-------------------------KSVTFASDFAAEVVGHALDAQGTRILPAIMASGFQDENTKRLVTGSVRGQLFEHFAHKEIAGSTDGGGTDGRTFGMKIFGNNSTRTKSTFQFSEREAFKGTRIPGMLRPGVYYKPRNQNFPAIDGL 1835
L L G FLG+ S +F+R CY ++ N+ + ++I G PGIGK+ FG++LLY L +TV+++ + + F E + E L++ + F + N WY+ D K P+K T++ SPK +EF K +S M W E+ +C+ ++ + + V+ FD GG+ R V E+ T K +E++++ + + +D KL+H+ P V+ V K + FAS++ AE V L+ + L + S + + SV G+ FE AH+ + G G TF ++ + R +T F++++ + G YY+P N N+P+ID +
Sbjct: 169 LELPKGVHFLGEINEPSTLFIRSCYRHLLDIVLD-----NNSSVRNLIITGNPGIGKTYFGYYLLYNLIQRNQTVMYDSHSTGHVIVFDQEAFYLYEVLNADQIRAFLSNANNWYIVDGK-EPQK-ATAKTILVCSPKKAIFKEFEKFQLSSTRYMPVWSYAEISKCKDKLYNHLQNNLVKTLFDKWGGIPRFVL-----EKATDYSHQCKLQEAIDACDFDILDYVGATEAKDTSHKLIHIVTNPLVVDVNIVNEQEQTDVDGGNDVEYIEEDPPYSQKIIKFASEYVAERVIMRLELRNRGKLRRDLFSSLSEGTSN-----SVLGRYFEEIAHQLLRG--------GGTFDIRSL-ESGGRPTTTKPFTKQDKIYTFSDVNGITDGCYYRPDNPNYPSIDSI 547 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig607.69.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig607.69.2 >prot_P-littoralis_Contig607.69.2 ID=prot_P-littoralis_Contig607.69.2|Name=mRNA_P-littoralis_Contig607.69.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=635bp MTSLSAMSEGDEEEGGGDHHAREAADGSPAADERAVQDEIRGVERKIEDVback to top mRNA from alignment at P-littoralis_Contig607:144766..152812- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig607.69.2 ID=mRNA_P-littoralis_Contig607.69.2|Name=mRNA_P-littoralis_Contig607.69.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=8047bp|location=Sequence derived from alignment at P-littoralis_Contig607:144766..152812- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig607:144766..152812- >mRNA_P-littoralis_Contig607.69.2 ID=mRNA_P-littoralis_Contig607.69.2|Name=mRNA_P-littoralis_Contig607.69.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1905bp|location=Sequence derived from alignment at P-littoralis_Contig607:144766..152812- (Pylaiella littoralis U1_48)back to top |