mRNA_P-littoralis_Contig605.17.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig605.17.1 vs. uniprot
Match: D7G3H8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3H8_ECTSI) HSP 1 Score: 846 bits (2186), Expect = 2.230e-284 Identity = 550/1067 (51.55%), Postives = 644/1067 (60.36%), Query Frame = 1
Query: 463 MSVRISTAAFCRAVVARMTIRDPELGGAIKTSCSWELLEPPGVSPSPTREGEGTEASFPAGRNNKHAASIRQQLLAAESFGLAGDYEHGVATRGAQRRSQEIVKRCRMHGILYVDQDFPPNDSSLGPSLAASGLLTWCRPANLATAAAATSAFGGYGRPLPSDVRACPFAVDASLPCALAALAERPRLVSAALCGRVEEMVAMAAXXXXXXXXXXXXXXXXXXXXXXXX-------CGGQGLLDKNGRPYRGGEGGGIKDKRRTPPKHAKAGLAPTAAEAAAKASASAANSGMFSARLCVDGVWTEYIMDDYFPCISA----PGGGGCGSGGLCLSRAHGPALWVSMLEKAYARATGSYSAVLRGHCL--SSEEESRGDAVRVAASAIARPAEVLGVFTGAPVLQVEIVGGKRRTGGVEAMEVEGADGGDETEQAAGELWRNVVSWIQQGWLVCLSTRPVPYPVESPTG-VQSRGGSHGPWKDGLRLGYAYTVLQAAEVGGGNKLFRLRGPLPAKEGWRGVWADDSPGWTPEALSSLRSASPS--GEPTSAEEERGAFWVSVREAVSAFVEVGVCMASSXXXXXXXXXXXXXSLRRKEKTTGGSGSGSGSGWVQEARRRVVFARVRAQTEPGGGCMRD--DLAAMQRNTAAVNGRKRDKNGESGEGTRWCWASPQVYALSVYETSSMFFSAHQKTCADEPEGF-YRDVGVTVLRLREGCQPEAIASTGNPAQAVASAGAVLTPGRYVVVPSCAGCTVGDSRENGYSEAS-----PRKARLLGMMTRRGSPWRSLGGGDDSICRFESRKATVTETRWEE----------EXXXXXXXXXXSSFDCPDVLSGLKDMFWGLDADCDGVLSREELDAFLRTTEGLPLQDDVYTWLVRAFSSCPRPPNIANASSYCDNYENRRRGGANGQRHRQRWGRRA---PAGTESCGNSSSGMNRCGGGDDHGGAESEDLDXXXXLCLTWRGFVEMYRRIWLAAGKDIEVVTRDLLFAGCITTTTPHPGGKRLISMEQRLSAVVSVHSDTAGFDLLAQPQHPGLLEAARILPVKRWGY 3552
M+ R+ST AFCRAVVAR+T+RDP++GG +KTSCSWELLEP S SP G+ A R NK ASIR+QL +A+S GLAG + G A R A +RS+EIVKRC +HG+LY+D +FPPNDSSLGPSLAASGL+TW RP +A +AFGGYGRPLPSDVR CPFA DASL CALAALAERP LVSAALCGRVEE+V+ + XXXXXXXXXXX G D+N R G G + ++RT G+A AEAAAKA +A SG+F ARLC DGVW EY++DD+FPC+S+ GG G GG CLSRAHGPALWVSMLEKAYAR GSYSA L G CL +E R AAS +ARPA+VLGV TG+PVLQV++ G+RR E + V DE E+ AGELW ++VSW +QGWLVCLST E+P G V G WKDGLRLGYAYTVLQ A VG G++L RLRGPL KEGWRG W DDSP WT EAL + +++ P+ G + EE GAFWVS+ EAVSAFVEVGVCM R E+ GGS W E RRRVVF R R + G G R+ A G++ GE EG W + QVYALSVYETS +FFS +Q+ +D G +RDVGVTVLR+R+GC PE +ASTGNPAQA S G VL PGRYVV+PS GC D G SE P + +P + G + + T E W E E SFD P++L GL MF GLDADCDGVL REELDAFLRTTEG+PLQDDVY WLVR+FSSCPRP ++ + + E RR GA G+R QR GR + PAG E G G + C HGG D+D LCLT GFVEMYR IW AAG+D VV RDL FA C S E R S VV+VHSD GFD LAQP P LLEAA LP++RWGY
Sbjct: 1 MAARVSTEAFCRAVVARVTVRDPKVGGTLKTSCSWELLEP---SASPVPVGK-------ASRENKSTASIRRQLRSAQSLGLAGTRDDG-AERLATQRSEEIVKRCGIHGVLYIDLEFPPNDSSLGPSLAASGLVTWRRPIQFDCGSA--TAFGGYGRPLPSDVRPCPFAADASLACALAALAERPCLVSAALCGRVEEVVSSSCASRGCDGXXXXXXXXXXXTTDHDGKDFPSETAVANGRTDEN----RNGRGDHLALRKRT-------GVA--TAEAAAKAFMAATESGIFCARLCADGVWKEYVLDDFFPCLSSYPERGGGSDSGGGGPCLSRAHGPALWVSMLEKAYARVVGSYSAALGGCCLPCGPAKEREETEARAAASVVARPAKVLGVLTGSPVLQVDLSAGRRRAKDGEGVGVRE----DEDEEVAGELWGSIVSWARQGWLVCLSTPSA----ETPEGGVHQESGES--WKDGLRLGYAYTVLQTASVGSGHRLVRLRGPLLPKEGWRGKWTDDSPLWTQEALIAAQNSCPTHPGMSSYRLEEPGAFWVSIEEAVSAFVEVGVCMVP-------LPPRTGGDCRGHERILGGSR------WAHEVRRRVVFKRRRDRAGGGQGSGREYWGSGGGTAGIGAAQGKEEGGRGEEEEGGM-LWGASQVYALSVYETSRIFFSVYQENRSDSASGVCWRDVGVTVLRVRDGCGPEVVASTGNPAQASVSTGTVLFPGRYVVIPSYTGCVTKDQALQGNSELGNKNNHPVXXXXXXXXXKDEAPHQDSNSGHPLRTAESNPRETSNEKTWREGAEAKKGREGEEDSKKEAEVGLSFDQPEILKGLMTMFEGLDADCDGVLCREELDAFLRTTEGIPLQDDVYVWLVRSFSSCPRP-SVLKDTHVSGHAETPRRVGAKGRRRPQRQGRASRAPPAGIEDDG----GCDGC-----HGGGGVHDVD----LCLTRHGFVEMYRYIWQAAGRDFGVVMRDLRFAECHDAR----------SEENRPSVVVAVHSDVQGFDFLAQPPDPELLEAAVALPIQRWGY 993
BLAST of mRNA_P-littoralis_Contig605.17.1 vs. uniprot
Match: A0A7S3S2L2_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3S2L2_9SPIT) HSP 1 Score: 107 bits (267), Expect = 1.740e-20 Identity = 93/294 (31.63%), Postives = 133/294 (45.24%), Query Frame = 1
Query: 1264 PTAAEAAAKASASAANSGMFSARLCVDGVWTEYIMDDYFPCISAPGGGGCGSGGLCLSRAHGPALWVSMLEKAYARATGSYSAVLRGHCLSSEEESRGDAVRVAASAIARPAEVLGVFTGAPVLQVEIVGGKRRTGGVEAMEVEGADGGDETEQAAGELWRNVVSWIQQGWLVCLSTRPVPYPVESPTGVQSRGGSHGPWKDGLRLGYAYTVLQAAEVGGGNKLFRLRGPLPAKEGWRGVWADDSPGWTPEALSSLRSASPSGEPTSAEEERGAFWVSVREAVSAFVEVGVCMA 2145
PT A AA A +A SG++ RL G W E ++DD+FPC PG G S+AHGP LWV +LEKAYA+ GSY A+ G C E L TGAP L RR ++ D D + + ++ + + ++VC ST P + + GG G + GL G+AY+++ A ++ G ++ +LR P E W+G W+D+SP T + L + GE A GAFW+S + FV + V MA
Sbjct: 28 PTGAPTAADARPAADASGLYRLRLNKHGQWRELVVDDFFPC--RPGSG------PVFSQAHGPELWVLLLEKAYAKLHGSYLALRSGMCY----------------------EGLADLTGAPCLY-------RR--------LDEEDDPDTEVEEKPVTFADLQRYDRNNFVVCCST-----PGQD---QMTEGGRPGDQEGGLVPGHAYSLISARKLHSGAEILKLRNPWGTFE-WQGAWSDNSPEMTDAVRAELDAEEDDGE-AEASANDGAFWMSFEDFCKHFVSISVAMA 266
BLAST of mRNA_P-littoralis_Contig605.17.1 vs. uniprot
Match: A0A8B7Z1T6_ACAPL (calpain-15-like isoform X1 n=2 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7Z1T6_ACAPL) HSP 1 Score: 90.9 bits (224), Expect = 1.410e-14 Identity = 77/281 (27.40%), Postives = 120/281 (42.70%), Query Frame = 1
Query: 1309 NSGMFSARLCVDGVWTEYIMDDYFPCISAPGGGGCGSGGLCLSRAHGPALWVSMLEKAYARATGSYSAVLRGHCLSSEEESRGDAVRVAASAIARPAEVLGVFTGAPVLQVEIVGGKRRTGGVEAMEVEGADGGDETEQAAGELWRNVVSWIQQGWLVCLSTRPVPYPVESPTGVQSRGGSHGPWKDGLRLGYAYTVLQAAEVGGGNKLFRLRGPLPAKEGWRGVWADDSPGWTPEALSSLRSASPSGEPTSAEEERGAFWVSVREAVSAFVEVGVCMASS 2151
N G + RLC DG W ++DD FPC G L S+A LWV ++EKA A+ +G Y A++ G CL E L TG+P +++ G + ++ +W ++S + G+L+ S G + + K GLR ++Y+VL ++ G N+L RLR P + WRG W+D+SP WT + +L A +GE G FW+S+++ + F V +C S
Sbjct: 641 NEGAYQVRLCRDGSWETVLIDDLFPCDER--------GRLVFSKAKRKQLWVPLIEKALAKMSGCYEALIAGRCL----------------------EGLATLTGSPCESLQLNASSATRGEIIDKDL---------------VWAKLLSSKEAGFLMGASCG----------GGNMKVDTELYEKVGLRPRHSYSVLDVQDICG-NRLIRLRNPW-GRYSWRGDWSDESPKWTQDLREALM-AHGAGE--------GVFWMSLKDMMRFFDCVDICKLHS 855
BLAST of mRNA_P-littoralis_Contig605.17.1 vs. uniprot
Match: A0A0V0QRB2_PSEPJ (Calpain catalytic domain-containing protein n=1 Tax=Pseudocohnilembus persalinus TaxID=266149 RepID=A0A0V0QRB2_PSEPJ) HSP 1 Score: 88.6 bits (218), Expect = 2.780e-14 Identity = 76/279 (27.24%), Postives = 118/279 (42.29%), Query Frame = 1
Query: 1315 GMFSARLCVDGVWTEYIMDDYFPCISAPGGGGCGSGGLCLSRAHGPALWVSMLEKAYARATGSYSAVLRGHCLSSEEESRGDAVRVAASAIARPAEVLGVFTGAPVLQVEIVGGKRRTGGVEAMEVEGADGGDETEQAAGELWRNVVSWIQQGWLVCLSTRPVPYPVESPTGVQSRGGSHGPWKDGLRLGYAYTVLQAAEV----GGGNKLFRLRGPLPAKEGWRGVWADDSPGWTPEALSSLRSASPSGEPTSAEEERGAFWVSVREAVSAFVEVGVC 2139
G+++ L V+G W + I+DDY PC + G S+ G +WV ++EKAYA+A GSY + +G PA L TGAP + K+ TG +Q E W V + +++ T TG Q + + G L G++Y +L+A +V G ++F++R P +KE WRG WADDS WT E L +++ G FW++ ++ F+ +GVC
Sbjct: 168 GIYAIWLHVNGEWKQIIIDDYIPCYN---------GQPIFSKNTGNEIWVMLIEKAYAKAYGSYEIIDQG---------------------GNPAYALKELTGAPCFNFDK--NKQLTG----------------QQQEQEFWNFVSKNFRNEYVITCYTEM--------TGKQDQENALG-----LLSGHSYAILRAEQVVSSAGKSERIFKIRNPWASKE-WRGDWADDSYLWTQELRKLLEVE---------QKDDGCFWINTKDFTKYFLGIGVC 375
BLAST of mRNA_P-littoralis_Contig605.17.1 vs. uniprot
Match: A0A7J0GQ07_9ERIC (Calpain-type cysteine protease family n=1 Tax=Actinidia rufa TaxID=165716 RepID=A0A7J0GQ07_9ERIC) HSP 1 Score: 89.0 bits (219), Expect = 4.410e-14 Identity = 76/275 (27.64%), Postives = 117/275 (42.55%), Query Frame = 1
Query: 1315 GMFSARLCVDGVWTEYIMDDYFPCISAPGGGGCGSGGLCLSRAHGPALWVSMLEKAYARATGSYSAVLRGHCLSSEEESRGDAVRVAASAIARPAEVLGVFTGAPVLQVEIVGGKRRTGGVEAMEVEGADGGDETEQAAGELWRNVVSWIQQGWLVCLSTRPVPYPVESPTGVQSRGGSHGPWKDGLRLGYAYTVLQAAEVGGGNKLFRLRGPLPAKEGWRGVWADDSPGWTPEALSSLRSASPSGEPTSAEEERGAFWVSVREAVSAFVEVGVC 2139
G+++ R C+ G W ++DD+ PC S G SR G LWVS+LEKAYA+ GSY A+ G V+ A V++ GG E++ + + A+G LW ++ + Q+G+L+ SP+G S G+ G+AY++LQ EV G +KL ++R P + W G W+D SP WT L+ A+ + G FW+S ++ F + VC
Sbjct: 458 GIYTVRFCIQGEWVPVVVDDWIPCESP------GKPAFATSR-KGNELWVSLLEKAYAKLHGSYEAL------------EGGLVQDAL--------------------VDLTGGA-------GEEIDMRSAQAQIDLASGRLWSQLLRFKQEGFLLGAG---------SPSGSDVHISS-----SGIVQGHAYSLLQVREVDG-HKLVQIRNPWANEVEWNGPWSDSSPEWTDRMRHKLKHV--------AQSKDGVFWISWQDFQIHFRSIYVC 663
BLAST of mRNA_P-littoralis_Contig605.17.1 vs. uniprot
Match: UPI0012632A4B (calpain-type cysteine protease DEK1-like n=1 Tax=Pistacia vera TaxID=55513 RepID=UPI0012632A4B) HSP 1 Score: 85.9 bits (211), Expect = 4.480e-14 Identity = 76/275 (27.64%), Postives = 116/275 (42.18%), Query Frame = 1
Query: 1315 GMFSARLCVDGVWTEYIMDDYFPCISAPGGGGCGSGGLCLSRAHGPALWVSMLEKAYARATGSYSAVLRGHCLSSEEESRGDAVRVAASAIARPAEVLGVFTGAPVLQVEIVGGKRRTGGVEAMEVEGADGGDETEQAAGELWRNVVSWIQQGWLVCLSTRPVPYPVESPTGVQSRGGSHGPWKDGLRLGYAYTVLQAAEVGGGNKLFRLRGPLPAKEGWRGVWADDSPGWTPEALSSLRSASPSGEPTSAEEERGAFWVSVREAVSAFVEVGVC 2139
G+++ R CV G W ++DD+ PC S G S+ G LWVS+LEKAYA+ GSY A+ G V+ A V++ GG E++ + + A+G LW ++ + Q+G+L+ SP+G S G+ G+AY++LQ EV G +KL ++R P + W G W+D SP WT L+ S + G FW+S ++ F + VC
Sbjct: 58 GIYTVRFCVQGEWVPVVVDDWIPCESL------GKPAFATSK-KGNELWVSILEKAYAKLHGSYEAL------------EGGLVQDAL--------------------VDLTGGA-------GEEIDMRSAQAQIDLASGRLWSQLLRFGQEGFLLGAG---------SPSGSDVHISS-----SGIVQGHAYSILQVREVDG-HKLVQIRNPWANEVEWNGPWSDSSPEWTDRMKHKLKHVPQSKD--------GIFWMSWQDFQIHFRSIYVC 263
BLAST of mRNA_P-littoralis_Contig605.17.1 vs. uniprot
Match: UPI001455CD51 (calpain-15-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI001455CD51) HSP 1 Score: 89.0 bits (219), Expect = 5.430e-14 Identity = 78/281 (27.76%), Postives = 118/281 (41.99%), Query Frame = 1
Query: 1309 NSGMFSARLCVDGVWTEYIMDDYFPCISAPGGGGCGSGGLCLSRAHGPALWVSMLEKAYARATGSYSAVLRGHCLSSEEESRGDAVRVAASAIARPAEVLGVFTGAPVLQVEIVGGKRRTGGVEAMEVEGADGGDETEQAAGELWRNVVSWIQQGWLVCLSTRPVPYPVESPTGVQSRGGSHGPWKDGLRLGYAYTVLQAAEVGGGNKLFRLRGPLPAKEGWRGVWADDSPGWTPEALSSLRSASPSGEPTSAEEERGAFWVSVREAVSAFVEVGVCMASS 2151
N G + RLC DG+W ++DD FPC G L S+A LWV ++EKA A+ +G Y A++ G CL E L TGAP +++ G V ++ +W ++S + G+L+ S G + S GLR ++Y+VL ++ N+L RLR P + WRG W+DD P W P+ +L A +GE G FW+S+++ + F V +C S
Sbjct: 627 NEGAYQIRLCRDGLWETVLIDDLFPCDER--------GRLVFSKAKRKQLWVPLIEKALAKMSGCYEALVAGRCL----------------------EGLATLTGAPCESLQLHASSAVRGEVIDKDL---------------VWAKLLSSKEAGFLMGASCG----------GGNMKVDSELYQNVGLRPRHSYSVLDVQDICS-NRLIRLRNPW-GRYSWRGDWSDDWPKWPPDMREALM-AHGAGE--------GVFWMSLKDMMRFFDCVDICKLHS 841
BLAST of mRNA_P-littoralis_Contig605.17.1 vs. uniprot
Match: A0A2G5EE02_AQUCA (Calpain catalytic domain-containing protein n=6 Tax=Ranunculaceae TaxID=3440 RepID=A0A2G5EE02_AQUCA) HSP 1 Score: 89.0 bits (219), Expect = 6.780e-14 Identity = 79/275 (28.73%), Postives = 121/275 (44.00%), Query Frame = 1
Query: 1315 GMFSARLCVDGVWTEYIMDDYFPCISAPGGGGCGSGGLCLSRAHGPALWVSMLEKAYARATGSYSAVLRGHCLSSEEESRGDAVRVAASAIARPAEVLGVFTGAPVLQVEIVGGKRRTGGVEAMEVEGADGGDETEQAAGELWRNVVSWIQQGWLVCLSTRPVPYPVESPTGVQSRGGSHGPWKDGLRLGYAYTVLQAAEVGGGNKLFRLRGPLPAKEGWRGVWADDSPGWTPEALSSLRSASPSGEPTSAEEERGAFWVSVREAVSAFVEVGVC 2139
G+++ R C+ G W ++DD+ PC APG SR G +WVS+LEKAYA+ GSY A+ G V+ A V++ GG E +++ AD + + A+G LW ++ + Q+G+L+ SP+G S G+ G+AY++LQ EV G +KL ++R P + W G W+D SP WT L+ S S + G FW+S ++ F + VC
Sbjct: 1809 GIYTIRFCIQGEWVPVVVDDWIPC-EAPG-----KPAFATSR-KGNEIWVSLLEKAYAKLHGSYEAL------------EGGLVQDAL--------------------VDLTGGAG-----EEIDIRSAD--VQIDLASGRLWSQLLRFKQEGFLLGAG---------SPSGSDVHISS-----SGIVQGHAYSLLQVREVDG-HKLIQVRNPWANEVEWNGPWSDSSPEWTDRMRHKLKHVSQSKD--------GIFWMSWQDFQIHFRSIYVC 2014
BLAST of mRNA_P-littoralis_Contig605.17.1 vs. uniprot
Match: A0A2K3P7H8_TRIPR (Calpain-type cysteine protease (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3P7H8_TRIPR) HSP 1 Score: 88.2 bits (217), Expect = 7.120e-14 Identity = 77/275 (28.00%), Postives = 118/275 (42.91%), Query Frame = 1
Query: 1315 GMFSARLCVDGVWTEYIMDDYFPCISAPGGGGCGSGGLCLSRAHGPALWVSMLEKAYARATGSYSAVLRGHCLSSEEESRGDAVRVAASAIARPAEVLGVFTGAPVLQVEIVGGKRRTGGVEAMEVEGADGGDETEQAAGELWRNVVSWIQQGWLVCLSTRPVPYPVESPTGVQSRGGSHGPWKDGLRLGYAYTVLQAAEVGGGNKLFRLRGPLPAKEGWRGVWADDSPGWTPEALSSLRSASPSGEPTSAEEERGAFWVSVREAVSAFVEVGVC 2139
G+++ R CV G W ++DD+ PC PG S+ G LWVS+LEKAYA+ GSY A+ G V+ A V++ GG E++ G + + A+G LW ++ + Q+G+L+ SP+G S G+ G+AY++LQ EV G +KL ++R P + W G W+D SP WT L+ S S + G FW+S ++ F + +C
Sbjct: 400 GIYTVRFCVQGEWVPVVVDDWIPC-ELPG-----KPAFATSK-KGIELWVSLLEKAYAKLHGSYEAL------------EGGLVQDAL--------------------VDLTGGA-------GEEIDMRSGEAQLDLASGRLWSQLLRFKQEGFLLGAG---------SPSGSDVHISS-----SGIVQGHAYSILQVREVDG-HKLVQIRNPWANEVEWNGPWSDSSPEWTDRVKHKLKHVSQSKD--------GIFWMSWQDFQIHFRSIYIC 605
BLAST of mRNA_P-littoralis_Contig605.17.1 vs. uniprot
Match: A0A7I8JSE9_SPIIN (Hypothetical protein n=1 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8JSE9_SPIIN) HSP 1 Score: 88.6 bits (218), Expect = 7.710e-14 Identity = 78/275 (28.36%), Postives = 117/275 (42.55%), Query Frame = 1
Query: 1315 GMFSARLCVDGVWTEYIMDDYFPCISAPGGGGCGSGGLCLSRAHGPALWVSMLEKAYARATGSYSAVLRGHCLSSEEESRGDAVRVAASAIARPAEVLGVFTGAPVLQVEIVGGKRRTGGVEAMEVEGADGGDETEQAAGELWRNVVSWIQQGWLVCLSTRPVPYPVESPTGVQSRGGSHGPWKDGLRLGYAYTVLQAAEVGGGNKLFRLRGPLPAKEGWRGVWADDSPGWTPEALSSLRSASPSGEPTSAEEERGAFWVSVREAVSAFVEVGVC 2139
G+++ R C+ G W I+DD+ PC S G SR G LWVS+LEKAYA+ GSY A+ G V+ A V++ GG E++ G + + A+G LW ++ + Q+G+L+ SP+G S G+ G+AY++LQ +V G +KL ++R P + W G W+D SP WT L+ S E G FW+S ++ F + VC
Sbjct: 973 GVYTVRFCIQGEWVPVIVDDWIPCESP------GKPAFATSR-KGNELWVSILEKAYAKLHGSYEAL------------EGGLVQDAL--------------------VDLTGGA-------GEEIDMRTGQAQIDLASGRLWSQLLRFKQEGFLLGAG---------SPSGSDVHVSS-----SGIVQGHAYSLLQIRDVDG-HKLLQIRNPWANEVEWNGPWSDSSPEWTDRMKHKLKYVPQSKE--------GIFWMSWQDFQVHFRSIYVC 1178 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig605.17.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig605.17.1 >prot_P-littoralis_Contig605.17.1 ID=prot_P-littoralis_Contig605.17.1|Name=mRNA_P-littoralis_Contig605.17.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1113bp MSVRISTAAFCRAVVARMTIRDPELGGAIKTSCSWELLEPPGVSPSPTREback to top mRNA from alignment at P-littoralis_Contig605:66953..76838+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig605.17.1 ID=mRNA_P-littoralis_Contig605.17.1|Name=mRNA_P-littoralis_Contig605.17.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=9886bp|location=Sequence derived from alignment at P-littoralis_Contig605:66953..76838+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig605:66953..76838+ >mRNA_P-littoralis_Contig605.17.1 ID=mRNA_P-littoralis_Contig605.17.1|Name=mRNA_P-littoralis_Contig605.17.1|organism=Pylaiella littoralis U1_48|type=CDS|length=3339bp|location=Sequence derived from alignment at P-littoralis_Contig605:66953..76838+ (Pylaiella littoralis U1_48)back to top |