prot_P-littoralis_Contig604.1.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig604.1.3
Unique Nameprot_P-littoralis_Contig604.1.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length345
Homology
BLAST of mRNA_P-littoralis_Contig604.1.3 vs. uniprot
Match: D7FRQ0_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRQ0_ECTSI)

HSP 1 Score: 108 bits (270), Expect = 3.190e-23
Identity = 69/170 (40.59%), Postives = 92/170 (54.12%), Query Frame = 0
Query:  159 SNVLTKEAREALLTYFFVFAHP----TTASVGSETAAEGKTDLPRPQQQQQQGKGMPNSSVD----ALDGSEGSKRWRRVGDGSGKEARRACEEGGGPDSEGWSTEASCIVCFGDYTDGERLCQLPCQHVFHAECINEWLDRARLPCCPLCKANLLEAGIPTE--RGVST 318
            +N  TKEARE L+TYF   A P    T A          K + P+   QQ++G G     +      L   E   + +   +    +  RAC+ G       WST  +CIVCFGDY  G+RL +LPC+HV+HA+CI+EWLDRA+LP CPLCK +L  A  P +  R +ST
Sbjct:  162 NNSFTKEAREELITYFVFGAGPEGLPTEAGAXXXXXXXKKGNRPK---QQERGNGASGDELQLLRLVLSYREQPVKVKAAAEED--DPARACDSGE------WSTGQACIVCFGDYEPGDRLARLPCRHVYHAQCIDEWLDRAKLPSCPLCKTDLRHATPPDDPCRSIST 320          
BLAST of mRNA_P-littoralis_Contig604.1.3 vs. uniprot
Match: A0A6H5JEY0_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEY0_9PHAE)

HSP 1 Score: 102 bits (253), Expect = 1.290e-21
Identity = 50/93 (53.76%), Postives = 62/93 (66.67%), Query Frame = 0
Query:  240 RACEEGGGPDSEGWSTEASCIVCFGDYTDGERLCQLPCQHVFHAECINEWLDRARLPCCPLCKANLLEAGIPTERGVSTGVAGG-GTATRAGR 331
            RAC+ G       WST  +CIVCF DY  G+RL +LPC+HV+HA+CI+EWLDRA+LP CPLCK +L  A  P +R  S    GG GT+  A R
Sbjct:  146 RACDTGE------WSTGQACIVCFSDYEPGDRLARLPCRHVYHAQCIDEWLDRAKLPSCPLCKTDLRHATPPDDRSRSISTVGGAGTSVNAAR 232          
BLAST of mRNA_P-littoralis_Contig604.1.3 vs. uniprot
Match: D7FRQ1_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRQ1_ECTSI)

HSP 1 Score: 101 bits (251), Expect = 3.610e-20
Identity = 44/74 (59.46%), Postives = 54/74 (72.97%), Query Frame = 0
Query:  249 DSEGWSTEASCIVCFGDYTDGERLCQLPCQHVFHAECINEWLDRARLPCCPLCKANLLEAGIPTERGVSTGVAG 322
            DS  WST  +CIVCFGDY  G+RL  LPC+HV+HA+CI+EWLDRA++P CPLCK +L  A  P +R  S   AG
Sbjct:  342 DSGEWSTGQACIVCFGDYEPGDRLALLPCRHVYHAQCIDEWLDRAKIPSCPLCKTDLRHATPPDDRSRSISTAG 415          
BLAST of mRNA_P-littoralis_Contig604.1.3 vs. uniprot
Match: A0A6H5KUH7_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUH7_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 6.470e-16
Identity = 35/64 (54.69%), Postives = 47/64 (73.44%), Query Frame = 0
Query:  250 SEGWSTEASCIVCFGDYTDGERLCQLPCQHVFHAECINEWLDRARLPCCPLCKANLLEAGIPTE 313
            SE WS   SCI+CFG+Y +G+ LC+LPC+H +HAECI+ WLD      CPLCK++LL   +P+E
Sbjct:   69 SELWSCSESCIICFGEYAEGDVLCRLPCRHTYHAECIDAWLDSPGHSWCPLCKSSLL---LPSE 129          
BLAST of mRNA_P-littoralis_Contig604.1.3 vs. uniprot
Match: D8LQW5_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQW5_ECTSI)

HSP 1 Score: 84.0 bits (206), Expect = 4.090e-14
Identity = 34/62 (54.84%), Postives = 45/62 (72.58%), Query Frame = 0
Query:  250 SEGWSTEASCIVCFGDYTDGERLCQLPCQHVFHAECINEWLDRARLPCCPLCKANLLEAGIP 311
            SE WS+  SCI+CFG+Y +G+ LC+LPC+H +HAECI+ WLD      CPLCK++LL    P
Sbjct:  449 SELWSSGESCIICFGEYAEGDVLCRLPCRHTYHAECIDAWLDGPGHSWCPLCKSSLLPPSEP 510          
BLAST of mRNA_P-littoralis_Contig604.1.3 vs. uniprot
Match: A0A6H5K661_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K661_9PHAE)

HSP 1 Score: 79.3 bits (194), Expect = 6.680e-13
Identity = 32/53 (60.38%), Postives = 40/53 (75.47%), Query Frame = 0
Query:  254 STEASCIVCFGDYTDGERLCQLPCQHVFHAECINEWLDRARLPCCPLCKANLL 306
            ST  SCIVCFGDYT GE LC+L C H++HA+CI+EWLD      CPLCK +++
Sbjct:  254 STRGSCIVCFGDYTYGEELCRLRCGHLYHAKCIDEWLDGENHGWCPLCKTDII 306          
BLAST of mRNA_P-littoralis_Contig604.1.3 vs. uniprot
Match: D8LSX3_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSX3_ECTSI)

HSP 1 Score: 78.6 bits (192), Expect = 1.160e-12
Identity = 32/53 (60.38%), Postives = 40/53 (75.47%), Query Frame = 0
Query:  254 STEASCIVCFGDYTDGERLCQLPCQHVFHAECINEWLDRARLPCCPLCKANLL 306
            ST  SCIVCFGDYT GE LC+L C H++HA+CI+EWLD      CPLCK +++
Sbjct:  247 STGGSCIVCFGDYTYGEELCRLRCGHLYHAKCIDEWLDGENHGWCPLCKTDIM 299          
BLAST of mRNA_P-littoralis_Contig604.1.3 vs. uniprot
Match: A0A383VKF5_TETOB (RING-type domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VKF5_TETOB)

HSP 1 Score: 68.6 bits (166), Expect = 3.960e-9
Identity = 29/48 (60.42%), Postives = 36/48 (75.00%), Query Frame = 0
Query:  256 EASCIVCFGDYTDGERLCQLPCQHVFHAECINEWLDRARLPCCPLCKA 303
            + SCI+CF DY  GE L QLPCQH +HA+CI++WL R+    CPLCKA
Sbjct:  329 DESCIICFCDYAPGELLKQLPCQHYYHAQCIDQWLTRSGN--CPLCKA 374          
BLAST of mRNA_P-littoralis_Contig604.1.3 vs. uniprot
Match: A0A7S2PT26_9DINO (Hypothetical protein n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2PT26_9DINO)

HSP 1 Score: 66.6 bits (161), Expect = 1.530e-8
Identity = 30/57 (52.63%), Postives = 39/57 (68.42%), Query Frame = 0
Query:  249 DSEGWSTEASCIVCFGDYTDGERLCQLPCQHVFHAECINEWLDRARLPCCPLCKANL 305
            DSEG   ++ C+VC  D+  GE + +LPC HVFHA CI+EWL R     CP+CKAN+
Sbjct:  339 DSEG--IQSQCMVCLSDFAAGEEVRRLPCSHVFHASCIDEWLRRCTD--CPICKANV 391          
BLAST of mRNA_P-littoralis_Contig604.1.3 vs. uniprot
Match: A0A1D2ACH0_AUXPR (RING-type domain-containing protein n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D2ACH0_AUXPR)

HSP 1 Score: 66.6 bits (161), Expect = 1.720e-8
Identity = 33/76 (43.42%), Postives = 44/76 (57.89%), Query Frame = 0
Query:  244 EGGGPDSEGWSTEASCIVCFGDYTDGERLCQLPCQHVFHAECINEWLDRARLPCCPLCKANLLEAGIPTERGVSTG 319
            E G P + G ST  +C +C  +Y DG++L  LPCQH FHA CI++WL  +R   CP+CK +   AG     G   G
Sbjct:  293 EAGAPRAGG-STRRTCAICLDNYVDGDKLRALPCQHHFHAACIDQWLS-SRTTLCPVCKGDAA-AGAAERAGAGAG 365          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig604.1.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRQ0_ECTSI3.190e-2340.59RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JEY0_9PHAE1.290e-2153.76RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FRQ1_ECTSI3.610e-2059.46RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KUH7_9PHAE6.470e-1654.69RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LQW5_ECTSI4.090e-1454.84RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K661_9PHAE6.680e-1360.38RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LSX3_ECTSI1.160e-1260.38RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A383VKF5_TETOB3.960e-960.42RING-type domain-containing protein n=1 Tax=Tetrad... [more]
A0A7S2PT26_9DINO1.530e-852.63Hypothetical protein n=1 Tax=Brandtodinium nutricu... [more]
A0A1D2ACH0_AUXPR1.720e-843.42RING-type domain-containing protein n=1 Tax=Auxeno... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 259..301
e-value: 7.0E-5
score: 32.2
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 258..302
e-value: 4.3E-10
score: 39.8
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 259..302
score: 12.25323
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 248..315
e-value: 1.2E-16
score: 61.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 187..232
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..34
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 196..212
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 324..344
NoneNo IPR availablePANTHERPTHR45977TARGET OF ERK KINASE MPK-1coord: 255..305
NoneNo IPR availablePANTHERPTHR45977:SF28TARGET OF ERK KINASE MPK-1coord: 255..305
NoneNo IPR availableCDDcd16486mRING-H2-C3H2C2D_ZSWM2coord: 258..302
e-value: 1.67991E-14
score: 64.9405
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 255..307

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig604contigP-littoralis_Contig604:21557..24640 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig604.1.3mRNA_P-littoralis_Contig604.1.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig604 6245..26568 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig604.1.3 ID=prot_P-littoralis_Contig604.1.3|Name=mRNA_P-littoralis_Contig604.1.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=345bp
MSVAPSQAPALNGERVDVEAAMPTTAVTNDQRTQNWGNSAEAPVVVDIVF
ESSHAGDVGSAVRASTARERPASERRPHEIRSRPSWCLSVGICFPMVQIF
FMLVLLSILYKRTSFGFVFLLVLVFSGWSTCICLGRNWSQQAQPRASLDI
PQSSALEQSNVLTKEAREALLTYFFVFAHPTTASVGSETAAEGKTDLPRP
QQQQQQGKGMPNSSVDALDGSEGSKRWRRVGDGSGKEARRACEEGGGPDS
EGWSTEASCIVCFGDYTDGERLCQLPCQHVFHAECINEWLDRARLPCCPL
CKANLLEAGIPTERGVSTGVAGGGTATRAGRGGRQSTADVGARL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD