mRNA_P-littoralis_Contig116.4.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig116.4.2
Unique NamemRNA_P-littoralis_Contig116.4.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig116.4.2 vs. uniprot
Match: D7FWP5_ECTSI (Arrestin_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWP5_ECTSI)

HSP 1 Score: 624 bits (1608), Expect = 9.760e-215
Identity = 308/390 (78.97%), Postives = 347/390 (88.97%), Query Frame = 3 
Query:   81 MGVDITISTRQGTCYAGDVIEGTVHLNVAGRNPDGSSANELVLRLFGVTKTRVMYDTSSVNHVNNNSQTYTHREMITENKEFLSYDVQLASFGGMAASGSHNFPFAVMLPPGLPPSMKEDGSQGGSCEIVYGFEARLHRPGILHFDAKGKAKLTVLSKPQEAGAMAPVLVGPATQTVKKFCCFKSGSMSIGFQADRSVVGLNESVGLTAVARNDSSAEVKEMRVEMKQVATWYARGYKDVRTRTIASVVVPGTQLQPAEVGNQRGRSATAIADTARADLQEQLDAGAGTRYELLVPGNSLLTLQTHVIEVRHTLSVTLKTSHCISSPDVWTPLVVHAGTTSTSEAAPGYGSFEPHDGQAVPFATGLDTDGNVKPVSVPQSAVTLTYNNEL 1250
            MG+DITISTRQG CYAGDVIEG VHLNV+ +N +GSSA+ELVLRL+GV KTRVMYDT+++ H N+N+Q+YTHREM+TE KEFLSYDVQLA+FGG AASGSH+FPF VMLPPGLPPSM+E+GSQGGSCEI YGFEARLHRPG+LHFDAKGKAKLTVLSKP EAGA  PVLVGPATQTVKKFCCFKSGSMSIGFQAD S VGLNE+VGLT VARNDSSAEVK M VE+KQV+TW+ARGYK+ +TRT+A+VVVPGTQL+ +E GNQRGRS+  IADTARADLQEQL AGAGT Y+LLVPGNSLLTLQ  +IEV+HTLSV LKT HCISSPDVWTPL+VHAGTTS  +   G G F PH G+A+PFATGLD +GNVKPVSVPQSAVT+ Y N +
Sbjct:    1 MGIDITISTRQGACYAGDVIEGAVHLNVSAKNEEGSSADELVLRLYGVAKTRVMYDTTNMAHNNSNAQSYTHREMLTEKKEFLSYDVQLAAFGGKAASGSHSFPFQVMLPPGLPPSMEENGSQGGSCEIFYGFEARLHRPGMLHFDAKGKAKLTVLSKPHEAGAATPVLVGPATQTVKKFCCFKSGSMSIGFQADHSEVGLNETVGLTVVARNDSSAEVKTMHVEIKQVSTWFARGYKESKTRTVAAVVVPGTQLRASEKGNQRGRSSAVIADTARADLQEQLGAGAGTHYDLLVPGNSLLTLQADLIEVKHTLSVMLKTPHCISSPDVWTPLLVHAGTTSAPDGVSGEGLFVPHSGEAIPFATGLDDEGNVKPVSVPQSAVTMEYTNNI 390
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BLAST of mRNA_P-littoralis_Contig116.4.2 vs. uniprot
Match: A0A6H5KH15_9PHAE (Arrestin_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH15_9PHAE)

HSP 1 Score: 393 bits (1010), Expect = 3.190e-125
Identity = 212/394 (53.81%), Postives = 267/394 (67.77%), Query Frame = 3 
Query:   81 MGVDITISTRQGTCYAGDVIEGTVHLNVAGRNPDGSSANELVLRLFGVTKTRVMYDTSSVNHVNNNSQTYTHREMITENKEFLSYDVQLASFGGMAASGSHNFPFAVMLPPGLPPSMKEDGSQGGSCEIVYGFEARLHRPGILHFDAKGKAKLTVLSKPQEAGAMAPVLVGPATQTVKKFCCFKSGSMSIGFQADRSVVGLNESVGLTAVARNDSSAEVKEMRVEMKQVATWYARGYKDVRTRTIASVVVPGTQLQPAEVGNQRGRSATAIADTARADLQEQLDAGAGTRYELLVPGNSLLTLQTHVIEVRHTLSVTLKTSHCISSPDVWTPLVVHAGTTSTSEAAPGYGSFEPHDGQAVPFATGLDTDGNVKPVSV--PQSAVTLTYNNELPQ 1256
            MG+++ ISTRQ TC+ GDVI+GTV LNV  ++  GS A  LV+RL G+ KTR M+  + V    + +  YT+R+M++E+ EFL YDVQLA FGG AASG H + F+V LPP LP SMKE G  G SC I YGF ARLHRPG+L+FDAKGK +L VL KP+E  A +PV+ GPA + VKK  C +SGSMS+GFQADRSVVGLNESVG+  VARNDSS  VK +RVE+ Q  +W A G  DV TR + SVVVPG +L  AE G QRG+SA AIADTARADL+ QL +GAGTR+EL VP ++ +TL +  I+VRH L+V ++   C+  PDVWT L V  GT+              H+       + L      +PV+V  P SAV L YN+E P+
Sbjct:    1 MGIELDISTRQSTCFPGDVIQGTVRLNVTAKDA-GSPAGSLVIRLVGLAKTRAMFIATGVVPTTSGAAPYTYRDMLSEDVEFLGYDVQLADFGGKAASGEHTYDFSVTLPPSLPASMKEQGGNG-SCAIAYGFRARLHRPGLLNFDAKGKVQLKVLGKPEETSASSPVVAGPAVKAVKKCYCLQSGSMSLGFQADRSVVGLNESVGVIVVARNDSSVAVKNLRVELVQETSWTANGAGDVSTRVVKSVVVPGAELGAAEFGGQRGQSAAAIADTARADLERQLASGAGTRHELTVPADTSITLNSETIQVRHVLTVRIQGPRCVECPDVWTSLHVQPGTSGVVPKV--------HE-----ETSSLAPSSTARPVTVTVPPSAVKLAYNHEQPR 379
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BLAST of mRNA_P-littoralis_Contig116.4.2 vs. uniprot
Match: D7FWP6_ECTSI (Arrestin_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWP6_ECTSI)

HSP 1 Score: 344 bits (883), Expect = 1.810e-106
Identity = 204/421 (48.46%), Postives = 251/421 (59.62%), Query Frame = 3 
Query:   81 MGVDITISTRQGTCYAGDVIEGTVHLNVAGRNPDGSSANELVLRLFGVTKTRVMYDTSSVNHVNNNSQTYTHREMITENKEFLSYDVQLASFGGMAASGSHNFPFAVMLPPGLPPSMKEDGSQGGSCEIVYGFEARLHRPGILHFDAKGKAKLTVLSKPQEAGAMAPVLVGPATQTVKKFCCFKSGS-----------------------------MSIGFQADRSVVGLNESVGLTAVARNDSSAEVKEMRVEMKQVATWYARGYKDVRTRTIASVVVPGTQLQPAEVGNQRGRSATAIADTARADLQEQLDAGAGTRYELLVPGNSLLTLQTHVIEVRHTLSVTLKTSHCISSPDVWTPLVVHAGTTSTSEAAPGYGSFEPHDGQAVPFATGLDTDGNVKPVSVPQSAVTLTYNNELPQ 1256
            MG++I ISTRQ TC+ GDVI+GTV LNV  ++  GS A  LV+RL G+ KTR M+  + V    + +  YT+R+ ++E+ EFL YDVQLA FGG AASG H + F+V LPP LP SMKE G  GGSC I YGF ARLHRPG+L+FDAKGK +L VL KPQE  A +PV+ GP    VKK  C +SGS                             MS+GFQADRSVVGLNESVG+T VARNDSS  VK +R+E+ Q  +W A G  DV TR + SVVVPG +L   E G QRGRSA AIADTARADL+ QL +GAGTRYEL VP ++ +TL +  I+          TS  +          VH  T+S +                 P +T          V+VP SAV L YN+E P+
Sbjct:    1 MGIEIDISTRQSTCFPGDVIQGTVRLNVTAKDA-GSPAGSLVIRLVGLAKTRAMFTATGVVPTESGAAPYTYRDTLSEDVEFLGYDVQLADFGGRAASGEHTYDFSVTLPPSLPASMKEQGG-GGSCAIAYGFRARLHRPGLLNFDAKGKVQLKVLGKPQETSASSPVVAGPEVMAVKKCYCLQSGSCVAESRSTMDLGHRHARWQHGAPTNSHESMSLGFQADRSVVGLNESVGITVVARNDSSVAVKNLRIELVQETSWTANGAGDVSTRAVKSVVVPGAELGAVEFGGQRGRSAAAIADTARADLESQLASGAGTRYELTVPADTSITLNSETIQPG--------TSGVVPK--------VHEETSSLA-----------------PSSTARPVT-----VTVPPSAVKLAYNHEQPR 381
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BLAST of mRNA_P-littoralis_Contig116.4.2 vs. uniprot
Match: D7FWP7_ECTSI (Arrestin_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWP7_ECTSI)

HSP 1 Score: 96.3 bits (238), Expect = 1.300e-18
Identity = 56/115 (48.70%), Postives = 69/115 (60.00%), Query Frame = 3 
Query:   87 VDITISTRQGTCYAGDVIEGTVHLNVAGRNPDGSSANELVLRLFGVTKTRVMYDTSSVNHVNNNSQTYTHREMITENKEFLSYDVQLASFGGMAASGSHNFPFAVMLPPGLPPSM 431
            + + +ST Q   +AG V++G+V + V  +N   SSA+EL LRL G  KT V Y T                +M  E+KE LSYDVQL SFGG AASG HNF F+V LP GLPPSM
Sbjct:    4 IKLKVSTLQHQYFAGSVVKGSVEVQVCTKNNKESSADELKLRLVGHVKTAVDYSTDKGEET----------KMAREDKEILSYDVQLGSFGGKAASGVHNFLFSVTLPAGLPPSM 108
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BLAST of mRNA_P-littoralis_Contig116.4.2 vs. uniprot
Match: A0A7S1C2T6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C2T6_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 3.960e-8
Identity = 57/231 (24.68%), Postives = 100/231 (43.29%), Query Frame = 3 
Query:   93 ITISTRQGTCYAGDVIEGTVHLNVAGRNPDGSSANELVLRLFGVTKTRVMYDTSSVNHV-----NNNSQTYTHREMITENKEFLSYDVQLASFGGMAASGSHNFPFAVMLPPGLPPSMKEDGSQGGSCEIVYGFEARLHRPGILHFDAKGKAKLTVLSKPQEAGAMAPV--LVGPATQTVKKFCCFKSGSMSIGFQADRSVVGLNESVGLTAVARNDSSAEVKEMRVEMKQ 764
            + + T + +   G+ + G + L +A   P  S+   + L++ G+ +TR     S          N  S+T  + E       F    V +  F G    GS++FPFA +LPPGLP    ED ++  S  + Y  +A +H  G+   + K   +LT+       G  + V  +   AT  V + CC   G  ++    D++     E+  +     N SS  +  +R ++K+
Sbjct:   19 VMVRTEKPSYVGGEEVRGNIFLQIA--EPVASTG--VFLKMKGMERTRWQVQRSRTVQTTGPDGNPQSRTENYTETFNGLHTFFKAKVPVYPFPGTVMPGSYDFPFAFVLPPGLPGVFHED-TRTHSAHVFYKLKAEVHVAGLFKSNIKHTQQLTI-----HEGLFSDVRPISREATSKVTQCCCIDKGHATLRATFDKNAYVPGETARVVCEVDNQSSLALTAVRSKLKR 239
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig116.4.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FWP5_ECTSI9.760e-21578.97Arrestin_N domain-containing protein n=2 Tax=Ectoc... [more]
A0A6H5KH15_9PHAE3.190e-12553.81Arrestin_C domain-containing protein n=1 Tax=Ectoc... [more]
D7FWP6_ECTSI1.810e-10648.46Arrestin_N domain-containing protein n=1 Tax=Ectoc... [more]
D7FWP7_ECTSI1.300e-1848.70Arrestin_N domain-containing protein n=1 Tax=Ectoc... [more]
A0A7S1C2T6_9STRA3.960e-824.68Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig116contigP-littoralis_Contig116:26461..31655 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog157072.XP_008864886.1
PFAMsArrestin_C,Arrestin_N,C2
Model size2804
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
GOsGO:0001932,GO:0002029,GO:0002031,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006810,GO:0006897,GO:0006898,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0008277,GO:0009267,GO:0009605,GO:0009966,GO:0009968,GO:0009987,GO:0009991,GO:0010646,GO:0010648,GO:0016020,GO:0016192,GO:0019220,GO:0019222,GO:0022401,GO:0023051,GO:0023057,GO:0023058,GO:0030587,GO:0031152,GO:0031323,GO:0031399,GO:0031623,GO:0031667,GO:0031668,GO:0031669,GO:0032268,GO:0032502,GO:0033554,GO:0042325,GO:0042594,GO:0043112,GO:0043170,GO:0043405,GO:0043408,GO:0043549,GO:0043949,GO:0044237,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0044764,GO:0045744,GO:0045859,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0048856,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051171,GO:0051174,GO:0051179,GO:0051234,GO:0051246,GO:0051338,GO:0051703,GO:0051704,GO:0051716,GO:0060255,GO:0065007,GO:0065009,GO:0071496,GO:0071704,GO:0071900,GO:0071944,GO:0080090,GO:0090702,GO:0098630,GO:0098657,GO:0098743,GO:0099120,GO:1902531
Exons5
Evalue1.71e-18
EggNOG OGsKOG3780@1|root,KOG3780@2759|Eukaryota
Ec32 ortholog descriptionImmunoglobulin E-set
Ec32 orthologEc-06_001430.1
Descriptionubiquitin-dependent endocytosis
Cds size1182
COG categoryE
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig116.4.2prot_P-littoralis_Contig116.4.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig116 28003..30699 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789478.056009-UTR-P-littoralis_Contig116:26460..280021680789478.056009-UTR-P-littoralis_Contig116:26460..28002Pylaiella littoralis U1_48UTRP-littoralis_Contig116 26461..28002 -
1680789478.1096425-UTR-P-littoralis_Contig116:30699..307111680789478.1096425-UTR-P-littoralis_Contig116:30699..30711Pylaiella littoralis U1_48UTRP-littoralis_Contig116 30700..30711 -
1680789478.1203535-UTR-P-littoralis_Contig116:31587..316551680789478.1203535-UTR-P-littoralis_Contig116:31587..31655Pylaiella littoralis U1_48UTRP-littoralis_Contig116 31588..31655 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789478.0688536-CDS-P-littoralis_Contig116:28002..286241680789478.0688536-CDS-P-littoralis_Contig116:28002..28624Pylaiella littoralis U1_48CDSP-littoralis_Contig116 28003..28624 -
1680789478.077208-CDS-P-littoralis_Contig116:28969..291751680789478.077208-CDS-P-littoralis_Contig116:28969..29175Pylaiella littoralis U1_48CDSP-littoralis_Contig116 28970..29175 -
1680789478.0861073-CDS-P-littoralis_Contig116:29486..297501680789478.0861073-CDS-P-littoralis_Contig116:29486..29750Pylaiella littoralis U1_48CDSP-littoralis_Contig116 29487..29750 -
1680789478.0985777-CDS-P-littoralis_Contig116:30609..306991680789478.0985777-CDS-P-littoralis_Contig116:30609..30699Pylaiella littoralis U1_48CDSP-littoralis_Contig116 30610..30699 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig116.4.2

>prot_P-littoralis_Contig116.4.2 ID=prot_P-littoralis_Contig116.4.2|Name=mRNA_P-littoralis_Contig116.4.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=394bp
MGVDITISTRQGTCYAGDVIEGTVHLNVAGRNPDGSSANELVLRLFGVTK
TRVMYDTSSVNHVNNNSQTYTHREMITENKEFLSYDVQLASFGGMAASGS
HNFPFAVMLPPGLPPSMKEDGSQGGSCEIVYGFEARLHRPGILHFDAKGK
AKLTVLSKPQEAGAMAPVLVGPATQTVKKFCCFKSGSMSIGFQADRSVVG
LNESVGLTAVARNDSSAEVKEMRVEMKQVATWYARGYKDVRTRTIASVVV
PGTQLQPAEVGNQRGRSATAIADTARADLQEQLDAGAGTRYELLVPGNSL
LTLQTHVIEVRHTLSVTLKTSHCISSPDVWTPLVVHAGTTSTSEAAPGYG
SFEPHDGQAVPFATGLDTDGNVKPVSVPQSAVTLTYNNELPQR*
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mRNA from alignment at P-littoralis_Contig116:26461..31655-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig116.4.2 ID=mRNA_P-littoralis_Contig116.4.2|Name=mRNA_P-littoralis_Contig116.4.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=5195bp|location=Sequence derived from alignment at P-littoralis_Contig116:26461..31655- (Pylaiella littoralis U1_48)
CGGTAGGTCGGCGGCACTTCATCAATGACTTCACGGCCAGCCCGTCCTTG
AGCACATATGCCAGAGAGGTGCGTGGAAATCTGATGGACTCATATTCAGG
GCGATAAGTTTAATTCCCTCATCAGTTTTTCTTTTGATGACAAAAAATCA
AACAGGTTTCTCTTGATGTCACACTTCAACTGCTCCTACTGCCGGGTTCT
GAATCCTTTCCCGTTCGTCTAACGATCGCCCTGCTGCACTCCTGTTGTTG
GCATTGCGGTCATGCCACGCATATCGAAGCTAGTCGCCGCGGACCCTCCC
TCTGTGCTGGGGTCGGTTCGAGTGTTGTTTTAACACTGTGTTGCCGAGTA
CGAAGGGTGCAACCATGTGCGCTTTTGGCTTTGAGTATCGAATCATATCA
TGTGTCACCGGTAGGTCCCCTGCCTCGCCGTGAAATTCGAATTCTCGTAT
GATATTCGTTCGTACGGGTTACAGCAGTGGGGAACAAGAAAGAAACGCAC
CTGCAAAAGTTTTTGAGCGGGAAACAACGACCTGTCTATGAGCACCTCCC
CACACCAAGCTATCTACATCTCCTGACGATTGAGGTTATGGTTAGGGTCA
CTGTCGGTTTGGGTCGTGTGGGGTCGGTCGTGTGTGGTTTGTTTTACAGG
CAAAAACGGGGTGCCGCGCAGCAGCAGTTCGGTGTGGGGGTACAGCAGTG
TTGATCAGCACGTCTGTTTTGATCAGCACGTCTGTTATACCTTCAGGTTT
ACACTGCTGGAACAACACAACCTGTCATATGCGCAGGCAGCTCGTGCAGG
TGTACTTTTTACCTGTTCCCTAACACGAACCTATACGCGCGCCCCTCGCC
ATGTGTGCTCTCATTTTGAGTCATGAGTCGGAACACTCGTCGTTTTTTCT
GTATCGCCGCTTCTCTCTCGTCTTCCGGCTCGCTGATACAACAGGAATAG
CTTACCATGGGTGTTGATATCACCATCTCGACTCGCCAAGGGACATGCTA
TGCTGGCGACGTGATCGAAGGCACTGTCCACCTGAACGTTGCTGGGGTAA
GGCGTTCCATCTTCAAATCGGGGGTGTGATTTGAAAAGGGAAGAAAGCAC
ATGGTTGACTTTCGCCGCATAACATGCAACGAACAAATCGGGCTGTTTTA
TGGGCTGTGTTGCAACGGGTGCATGGTGACAATGAAGCAACTCGCAAAGG
AGATATGTCTTCCCATTTAAACAAGTGGTGCTCGCGTCTAGCAAAGCCAA
GGCGCATGTTTTCCTCCAGCGGAAACGTCAATATCAAAGAAAGGACAACT
CCCACTCGGCCCGAGACTGAGGGGGTGTTTCACAGTCCTTAAGGGATCGG
TCAAACCTCTGGAACGAACTATCTGTATAGATACTTGTAGGGTACTTACA
CGAACTCCGGTTGTATACAAATGGTATGTACGATGCTTCGGCAACAGTAA
AAGTTCCGGGTGAAGCTCTCCGTTATGCTGTATACAACGCAATTCTTTCT
AAAGATGCACCCATCGCAGTGACTACCGCTGAAGCTTAAACATAATGTCG
TGAATTGTATGAGGACCGGTATTCAGAAAAGTTCCCGGAATATAGCAGCG
AGAAGCGCGATTGTGACCGTAGCCTGCGGTTGTTGCACCTTGAAGTCGGA
GTCCAGGATGTGCAAAAAATAAATTTGTGCCGGCTTTTTGTGGGTGTTGA
TCGGAATGGTGAAGGCAGCAAGTAGCATGGCCTCACTGGCACACCACTGG
TTTGCCCTACAGCAGTACATCCTGGTCGACTCGTGTCGATTTGAATGTTT
CATGGGTAACAAGTACTTCGTACCTCCTCTGTTCAGTGCGAACATGCATC
AAACCAGTTCTCCCGCTGCCCGCCCATTGCACTGCACCTACCGGACAACG
CGCAGAGAAACCCTGATGGGTCATCCGCAAATGAGCTCGTGCTGCGGCTT
TTTGGCGTGACCAAGACTCGCGTCATGTACGACACGTCGAGCGTGAACCA
CGTCAACAACAACTCGCAGACATATACCCACCGCGAGATGATCACCGAAA
ACAAGGAGTTTTTGTCGTACGATGTGCAGCTGGCGTCATTCGGCGGGATG
GCGGCTTCAGGGAGTCACAACTTCCCTTTCGCGGTGATGCTTCCTCCGGG
ATTGCCGCCATCCATGAAGGTACGGCTGGGTCCATCCATCCCTTTCACAT
CTGACTTGTGCTATGATAGTTCCACCTTATGGAGCCACAACAACCAGGTA
CAAAGTATAGGGCGTACCATTTCTAACACACCCGTGTCGCTGCTTGACTG
TAAACGATGCCGCGGCTAGCCCTCGATTTGTTCTGCACGTAAACGAAGAT
GCAGTGCCGGGGTTCACTTGTCGACAGACCAGAGTCAACCAGAAGGATAC
ATGACCCTGTTGTCAATTGGCCGACCACCGACCGAAGCTGTGTACCTTGT
TTTTGCTTTTCTGGTGCCATTTTTGCACAGGAGGACGGCTCCCAGGGAGG
CAGCTGCGAGATCGTGTACGGCTTCGAGGCCCGGCTGCACCGGCCAGGGA
TACTCCACTTTGATGCGAAGGGAAAAGCCAAGCTGACCGTGTTGAGCAAA
CCACAGGAAGCTGGCGCCATGGCTCCGGTACTTGTGGGGCCCGCGACACA
AACAGTGAAAAAATTCTGCTGTTTCAAGAGCGGGAGGTCCGTGGTCTGGG
CGCGGTATTTTAATGTTCGGTCTCTTGTGCGCGGTGTTGAGGCCTGGCCT
GTGTGTACGTTTTCTCCAAATAATCACATTAGTTTGGTGTCGTTTTCCAC
AGGCCAGGAGATTGAAGGCGCAAACCTATTGTTTGGCAAAGTAGCTATCC
AACATCGCAGAGGAATGCACCCTTGTCTCTGCCTCTTGCGGAGGTGGGGA
GATTCGTCTCCTCTATGATAATTTGTGTGCGGCATGTGCCTGTTGCGTGT
CAACCCCGCAGATATGCGAGCCTCTGAGATTTCCTCCCCTCTCATGATTG
TCCTCCGTACTCTTTTTTCTCGACGTGCCAGCATGAGTATTGGCTTCCAG
GCAGACCGATCGGTGGTGGGGCTGAACGAATCCGTAGGTCTTACAGCCGT
GGCACGCAACGACAGCTCGGCTGAGGTGAAGGAAATGCGCGTGGAGATGA
AGCAGGTGGCCACGTGGTACGCCCGGGGATACAAAGACGTCAGAACCCGG
ACCATTGCGTCGGTCGTCGTACCTGGGACGCAACTGCAACCGGCGGAGGT
CGGGAACCAACGTGGGCGAAGCGCCACTGCCATAGCAGATACAGCCCGGG
CAGATCTTCAGGAACAACTCGACGCCGGGGCTGGCACTCGCTACGAGCTC
TTGGTCCCTGGCAACAGCCTGCTCACGCTCCAAACGCACGTAATCGAGGT
CAGGCACACGCTCAGCGTGACGCTCAAGACTTCGCACTGCATCAGCTCCC
CCGATGTTTGGACACCGCTGGTTGTACACGCCGGCACCACCAGTACCTCG
GAAGCGGCGCCCGGATATGGATCTTTCGAACCGCATGACGGGCAGGCTGT
GCCATTCGCGACGGGGCTGGATACCGACGGGAACGTTAAGCCTGTATCGG
TGCCCCAAAGCGCGGTGACTTTGACGTACAACAACGAACTGCCGCAGCGT
TAGGAGCGCCAACTACGCCTTCCACTGAGCTGATTTCCGGCCTTTCGACT
TCGGTGGGGATTACGCCGGGCTGGAGAGCTCCCTGGAAGCGATCCCATGT
CGCTGGTTTAGTAGGAAGGCAGCAGGCAGGCATGGGCCGTGGCGGTGTGG
GAGCGGTACAATCAGTGTGGTGAGAAATGAAAGAGGCCACCGACCCCTTT
GTTTGGCTGATGTACGGCAAGCGCACGCGTGTGTGGTACGATCAGTAGAC
ATGCACCTAGAATGCATGGATGATAAATATCGGTTTTGTGGTGCTGACTA
GAACAACCCGTGACAGTTTTGTAGAGCTTTTTTTGCTTTAGTTCTGAGCT
GTACTGCGGTTGTCTTGAGGCGTCTTTACGTTACGTTCTTGTTTTATCGC
CCAAAAGCAACAATAATTCCGGTTCGCTGATCGAGAGGTGCCCACGGCTT
GGCTATTGATTAGCTAACAGCTTTGCCCTTTACAAGTGCTGACTTTTTTT
GGCAATTGGTAGAAGAATAATGTTTTTTTTTATCGGCCTCAGCTTTTTGG
CGCACAATGTTAAGTTTCAGAGGCACGTCGCCAGAAGCGCGAATGTTTGT
GTATCTCATGCTCGGCACTGCTTGGGTGCCCTGTTTTATTATTCAATATT
TTGTCACTATTGGCGCAGTCACGTTTAAAGCCGTTGTGCGGGAGTCGCCA
GGACCGACGCTGTGTTGATGTTTTTTTTTGTTTATGCTGCTACATACTTT
CGAAGTAAAAATAGTATTGTTGTCGTTGGGTAGGTTGTATTTTAGAAGTA
CATTGGGCAGAGTGTTTTGGACATTACCAAACCGTTACGCCATTTTAGAA
ATGGCCTTTTCCCTTTAGTTCAAATTTGGTCATTTTATGTTTCAAACTTC
AGCAATAGTCTGAAAGAAGTTGGTAGGATTGAGAGCTTTGCCGACTTTTT
GGCCGCAGTACTCGAACTACCGGTAGAGCCTTACGCTGCCGAGGCTCGTC
CATCAGCTCACATCAGTACCCTTTTTTGTGTCGTACCAGGTATGTTTTAA
AAAACGACGATGCCCTTTATGGTTCCCATGAGACCCATTCCTGCTCGAGG
GTTGTTTGCGTTGTGTTGGACCAGAAATCGTTGGCAAGTCAAGGAGGGGG
TACCGCAGGCGGCGCAGCCGTGTTCCGCGGCAGTTCTACAGCCGTGAAAC
AGTAGTACAGAGACAGCATCCGCATCCGTCCCCGTTGTGATTAATAGAAA
TAATAGTCAAACTTTGTGTCGGCGGGGATGAATGCAGGTGCGGATGCTTG
CGCTGAACTGAAGCCCAAGAAGTCAAAGGGCCCGCTCCAGCCCCCACAGG
TGTGCTGTTTGCCTACATGTAGCCACCGCAGGGGTCATGGCGCCGTAAAT
GATGCAAGCAGGCGCAACCTGCTCCGCGAAAGAAAGGCGCGGTCCCCAAT
GTACTGGTAGAAGAGCACTCCTCGCTGCCGAGTGTAGAACTGGGAAAGGA
GAAACACATGCTGGGGGAGCTCGGGCGTTGTCTATCAGTGAATGA
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Coding sequence (CDS) from alignment at P-littoralis_Contig116:26461..31655-

>mRNA_P-littoralis_Contig116.4.2 ID=mRNA_P-littoralis_Contig116.4.2|Name=mRNA_P-littoralis_Contig116.4.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1182bp|location=Sequence derived from alignment at P-littoralis_Contig116:26461..31655- (Pylaiella littoralis U1_48)
ATGGGTGTTGATATCACCATCTCGACTCGCCAAGGGACATGCTATGCTGG
CGACGTGATCGAAGGCACTGTCCACCTGAACGTTGCTGGGAGAAACCCTG
ATGGGTCATCCGCAAATGAGCTCGTGCTGCGGCTTTTTGGCGTGACCAAG
ACTCGCGTCATGTACGACACGTCGAGCGTGAACCACGTCAACAACAACTC
GCAGACATATACCCACCGCGAGATGATCACCGAAAACAAGGAGTTTTTGT
CGTACGATGTGCAGCTGGCGTCATTCGGCGGGATGGCGGCTTCAGGGAGT
CACAACTTCCCTTTCGCGGTGATGCTTCCTCCGGGATTGCCGCCATCCAT
GAAGGAGGACGGCTCCCAGGGAGGCAGCTGCGAGATCGTGTACGGCTTCG
AGGCCCGGCTGCACCGGCCAGGGATACTCCACTTTGATGCGAAGGGAAAA
GCCAAGCTGACCGTGTTGAGCAAACCACAGGAAGCTGGCGCCATGGCTCC
GGTACTTGTGGGGCCCGCGACACAAACAGTGAAAAAATTCTGCTGTTTCA
AGAGCGGGAGCATGAGTATTGGCTTCCAGGCAGACCGATCGGTGGTGGGG
CTGAACGAATCCGTAGGTCTTACAGCCGTGGCACGCAACGACAGCTCGGC
TGAGGTGAAGGAAATGCGCGTGGAGATGAAGCAGGTGGCCACGTGGTACG
CCCGGGGATACAAAGACGTCAGAACCCGGACCATTGCGTCGGTCGTCGTA
CCTGGGACGCAACTGCAACCGGCGGAGGTCGGGAACCAACGTGGGCGAAG
CGCCACTGCCATAGCAGATACAGCCCGGGCAGATCTTCAGGAACAACTCG
ACGCCGGGGCTGGCACTCGCTACGAGCTCTTGGTCCCTGGCAACAGCCTG
CTCACGCTCCAAACGCACGTAATCGAGGTCAGGCACACGCTCAGCGTGAC
GCTCAAGACTTCGCACTGCATCAGCTCCCCCGATGTTTGGACACCGCTGG
TTGTACACGCCGGCACCACCAGTACCTCGGAAGCGGCGCCCGGATATGGA
TCTTTCGAACCGCATGACGGGCAGGCTGTGCCATTCGCGACGGGGCTGGA
TACCGACGGGAACGTTAAGCCTGTATCGGTGCCCCAAAGCGCGGTGACTT
TGACGTACAACAACGAACTGCCGCAGCGTTAG
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