mRNA_P-littoralis_Contig60.54.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig60.54.1 vs. uniprot
Match: D8LH05_ECTSI (Cryptic tubulin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH05_ECTSI) HSP 1 Score: 669 bits (1726), Expect = 5.220e-230 Identity = 416/659 (63.13%), Postives = 441/659 (66.92%), Query Frame = 2
Query: 203 MSCIHLHLGQAGIQLGESFWGLAEEEFFVDD----GRGDRNRGXXXXGRATASPESSSVR-MRAGGTAMFHEDGGWARCLAVDSEPKVVQRFQGRVGSLRPENAIFSQSGLANNWAMGFASCRSLGDGEEGAGGPFSRCMEGMRKEAERSSWLNSVVMTHSLAGGTGSGLGSGLLQALRDEYPSLYLFSACVGPFGTGDTPLQHYNSVLALQHLQAYADCVIYRGNDDLLRGAAETSARRDAAAPDPS------RTMGG--EGSGTGGWRPAGILSRRGXXXXXXXXXXX----RG-MVVSTADMNASLALDMASYFFPTSRPFDRFKPTVQAGSGHRR--HXXXXXXXXQETAPRPFDGGCLMAAACPLPGAKFVDLRSSLSTGPATAVASHGGQGVSSTSS----SATKNTWAVIAHDLGRRAPLSPNKGGGVDDDACVAAHHVIRGVALGAEAAAAGGGATWRGAGAGSETGATAEMANGGGSAIFNARRRMPRCGMYAGINSPAATAEAAAVVATPAPAATAFGAEESAQASEVLRRHHRCPEWRTATDVSGAP---------------ALRSRGGTSRSVTTVCNQTRIRGVLGDVVARAEEKFKARAYLHWYYRHGLEDEDFLAAFEGVRSVERGYDGLARAFG--DGGGERR 2056
MSCIHLHLGQAGIQLGESFW LAEEEF VDD G GD + GRA +R MR GGTAMFHED GWARCL VDSEPKVVQ FQGR+ SLRPENAI+SQSGLANNWAMGFASCRS GEEG PFSRCMEGMRKEAERS WLNS VMTHSLAGGTGSGLGSGLLQALRDEYPSLYL SACVGPFGTGDTPLQHYNS LALQHLQAYADCVIYRGNDDLLRGAAE SAR AA P+ GG G G GWRP G+LSR G XXXXXXXXX RG MVVSTADMNASL+LDMASYFFPTSRPFDRF+P G R XXXXXXX E A RPFDGG LMAAA PLP AKFVDLRS+LS GP + + GQG+ S+SS S TK WA +A+D GR+ PL P + GG+DDDACVAAHH+IRG GA AG +A E LRRHH C +WRTA+DVS AP ALRS+G RSVTTVCNQTRIRGVL DVV RAE KF+ARAYLHWYYRHGLEDEDFLAAFEGVR+VERGYDGLARAFG G GE R
Sbjct: 1 MSCIHLHLGQAGIQLGESFWRLAEEEFLVDDVRAGGGGDGSYSGRGSGRAALPSRKPPMRRMRPGGTAMFHEDDGWARCLVVDSEPKVVQGFQGRLESLRPENAIYSQSGLANNWAMGFASCRSDVRGEEG---PFSRCMEGMRKEAERSCWLNSAVMTHSLAGGTGSGLGSGLLQALRDEYPSLYLISACVGPFGTGDTPLQHYNSALALQHLQAYADCVIYRGNDDLLRGAAEASARISAATSSPAVSDSRWAASGGPRSGGGAAGWRPVGVLSRHGGSXXXXXXXXXXXSGRGRMVVSTADMNASLSLDMASYFFPTSRPFDRFQPAPPTVEGRPRSHQQXXXXXXXXEMAQRPFDGGSLMAAAVPLPAAKFVDLRSTLSAGPLASDSGGIGQGLFSSSSLPSSSTTKKDWAALANDHGRKVPLCPRRAGGLDDDACVAAHHLIRGATFGA---------------AGXXXXXXXXXXX-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEAGEALRRHHECQKWRTASDVSCAPGCAQHSEWVRTLVHSALRSQG-VLRSVTTVCNQTRIRGVLRDVVKRAEGKFRARAYLHWYYRHGLEDEDFLAAFEGVRTVERGYDGLARAFGCSSGSGEAR 635
BLAST of mRNA_P-littoralis_Contig60.54.1 vs. uniprot
Match: A0A4D9CQS6_9STRA (Tubulin delta chain n=5 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CQS6_9STRA) HSP 1 Score: 206 bits (525), Expect = 7.810e-54 Identity = 207/649 (31.90%), Postives = 278/649 (42.84%), Query Frame = 2
Query: 206 SCIHLHLGQAGIQLGESFWGLAEEEFFVDDGRGDRNRGXXXXGRATASPESSSVRMRAGGTAMFHEDGGWARCLAVDSEPKVVQRFQ--GRVGS-LRPENAIFSQSGLANNWAMGF-ASCRSLGDGEEGAGGPFSRCMEGMRKEAERSSWLNSVVMTHSLAGGTGSGLGSGLLQALRDEYPSLYLFSACVGPFGTGDTPLQHYNSVLALQHLQAYADCVIYRGNDDLL------RGAAETSARRDAAAPDPSRTMGGEGSGTGGWRPAGILSRRGXXXXXXXXXXXRGMVVSTADMNASLALDMASYFFPTSRPFDRFKPTVQA--GSGHRRHXXXXXXXXQETAPRPFDGGCLMAAACPLPGAKFVDLRSSLSTGPAT----------AVASHGGQGV-SSTSSSATKNTWAVIAHDLGRRAPLS-PNKGGGVDDDACVAAHHVIRGVALGAEAAAAGGGATWRGAGA---GSETGATAEMANG-GGSAIFNARRRMPRCGMYAGINSPAATAEAAAVVATP-APAATAFGAEESAQASEVLRRHHRCPEWRTATDV---------------SGAPALRSRGGTSRSVTTVCNQTRIRGVLGDVVARAEEKFKARAYLHWYYRHGLEDEDFLAAFEGVRSVERGYDGL 2020
+ +H+H+GQ G Q+GE FW LA ++F GD + + SP+ +FHE G A + VDSE KVV R + R+ S LR E I SG ANNWAMGF +SC+ L G G F + +R+E ER L S+V+ HSLAGGTG+G+GS L Q LR+ PS+ + + VGPF TGD Q YNS L L L +AD ++YR ND LL GAA+ + RR G G R + + + S +N SLA D+A FPT P++ G G+R +D L P AKFVD RSS S A+ A A HG V A WA +G+ S P + G + +AA +RGV L G G G E + +E G GG R R ++P + TP P TAF + L R R P WR + + + PA R +S V N+T + + ++ RAEE + RAYLHW++R+G+ED+DF AAFEG+R V+ YD L
Sbjct: 4 ATLHVHIGQCGNQIGEHFWSLAADDFAAAADNGDAS---------SFSPQYPHP--------LFHEQDGRAAAVFVDSEAKVVDRLRKNSRLASVLRKEACITDSSGRANNWAMGFTSSCKELAQGR----GLFYSTVNVLRRELERIDSLQSLVIYHSLAGGTGAGVGSALFQYLREACPSVNITTCSVGPFSTGDCATQWYNSALTLNALSEHADTILYRDNDQLLGEYLRVAGAAQGTGRR----------------GMSGGRGLALATSK----------------ASMGRLNESLAADLACLLFPTVT-----SPSIPTCGGGGYRA----------------WDALALQHDCTPFKYAKFVDNRSSWSASAASTLPTSSVPFKAAAGHGLHHVPDGRLGGAGGGQWADECVYVGKDVIASFPTEDGRGKANVTLAAQMTVRGVDL-------------PGTGPHVPGQEQVSLSEHPRGKGGPQKSGQCRNSNRNHQKPQTSNPY-------LPPTPWHPGLTAFLHHD-------LPRALRLPSWRQGSAIGTVFSSHSQPSILPCTSVPAARPFSSSSPGVAICANRTHMSSTVEKILGRAEEMAEHRAYLHWFHRYGIEDDDFTAAFEGLRRVKEEYDEL 551
BLAST of mRNA_P-littoralis_Contig60.54.1 vs. uniprot
Match: A0A8K1FBW7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FBW7_PYTOL) HSP 1 Score: 173 bits (438), Expect = 1.870e-42 Identity = 123/403 (30.52%), Postives = 177/403 (43.92%), Query Frame = 2
Query: 212 IHLHLGQAGIQLGESFWGLAEEEFFVDDGRGDRNRGXXXXGRATASPESSSVRMRAGGTA-------MFHEDGGWARCLAVDSEPKVVQ--------RFQGRVGSLRPENAIFSQSGLANNWAMGF--------------------------ASCRSLGDGEEGAGGPFSRCMEGMRKEAERSSWLNSVVMTHSLAGGTGSGLGSGLLQALRDEYPSLYLFSACVGPF-GTGDTPLQHYNSVLALQHLQAYADCVIYRGNDDLLRGAAETSARRDAAAPD--PSRTMGGEGSGTGGWRPAGILSRRGXXXXXXXXXXXRGMVVSTADMNASLALDMASYFFPTSRPFDRFKPTVQAGSGHRRHXXXXXXXXQETAPRPFDGGCLMAAACPLPGAKFVDLRSSL 1288
I +H+GQ G Q+G++FW L E + + ++ ++++ R R T ++H G ARC+ VD+EPKV++ + G P + F QSG NNWAMG+ + R + + ME ++KE E VV+ HSL GGTGSGLG +L+ +RD YP YL + + P +GDTPLQ+YN++ L HLQ YADCVIY+ NDDLLR A+ RD + + P R MG EG + S ++NA A D+A Y FP ++Q +PFD G L+++ CPLP AKFVD+R+ +
Sbjct: 3 IFVHVGQCGNQVGDAFWRLTESVY----------EAPATSTASLSAKQAAASRARRKETPPTLYREQLYHPQSGKARCILVDTEPKVIRSMLEARQHKATGSGSVFVPAHVHFEQSGRGNNWAMGYNLQTHRHNVLPSKSDASSMVPLTGTHKTKRVVIESRSAKQELLEMVMESLQKEIEGLDCYQGVVLMHSLGGGTGSGLGCRVLETIRDTYPRSYLTTVSIAPSCASGDTPLQNYNALFTLGHLQEYADCVIYKENDDLLRTASYWKTLRDQSQSNASPGREMGEEG-------------------------LTKAKKTSLQELNALAAADVAGYLFPIVASTSAGSRSIQMA-------------------KPFDAGKLVSSCCPLPSAKFVDIRTGI 351
BLAST of mRNA_P-littoralis_Contig60.54.1 vs. uniprot
Match: A0A329SNZ5_9STRA (Tubulin domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SNZ5_9STRA) HSP 1 Score: 162 bits (411), Expect = 5.200e-39 Identity = 127/381 (33.33%), Postives = 164/381 (43.04%), Query Frame = 2
Query: 212 IHLHLGQAGIQLGESFWGLAEEEFFVDDGRGDRNRGXXXXGRATASPESSSVRMRAGGTA-------MFHEDGGWARCLAVDSEPKVVQR-----FQGRVGSLRPENAIFSQSGLANNWAMGFASCR-----------SLGDGEEGAGGPFSRCMEGMRKEAERSSWLNSVVMTHSLAGGTGSGLGSGLLQALRDEYPSLYLFSACVGPFGT-GDTPLQHYNSVLALQHLQAYADCVIYRGNDDLLRGAAETSARRDAAAPDPSRTMGGEGSGTGGWRPAGILSRRGXXXXXXXXXXXRGMVVSTADMNASLALDMASYFFPTSRPFDRFKPTVQAGSGHRRHXXXXXXXXQETAPRPFDGGCLMAAACPLPGAKFVDLRS 1282
+HLH+GQ G QLG ++W LA + DG RNRG R S G +FH G ARC+ VDSEPKV++ G V L P A Q+G NNWAMG+ R ++ D E M+ +R E E V+ HSL GGTGSGLG +L+++RD YP Y+ +A V P T GDTPLQ+YN+VL L+ LQ AD VIY+ ND+LLR A G W+ VS ++N+ A D+A FP V G G + RPFD G L+ CP+P AK +D+RS
Sbjct: 3 VHLHVGQCGNQLGAAYWRLAASSGEIQDGN--RNRGDTGASRPLRRASGGSTAAIKGAKEAVSLPRQLFHPSTGAARCILVDSEPKVIRAVCHEVIDGAVACL-PAYAHVEQAGRGNNWAMGYYGPRLKSPTPAFTSLAVDDHRE----LVELVMDSLRHEIEGVDCYQGSVVMHSLGGGTGSGLGCRVLESMRDTYPKAYIVTASVAPSCTRGDTPLQNYNAVLTLKCLQDVADAVIYKDNDELLRTA-------------------------GYWKAM-------------VQGSDNNQRVSLEEVNSMAAADLAGLLFP-----------VGTGDG--------------STVRPFDFGKLLHDVCPMPAAKILDVRS 313
BLAST of mRNA_P-littoralis_Contig60.54.1 vs. uniprot
Match: A0A662XS19_9STRA (Tubulin delta chain n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XS19_9STRA) HSP 1 Score: 160 bits (404), Expect = 2.360e-38 Identity = 122/369 (33.06%), Postives = 161/369 (43.63%), Query Frame = 2
Query: 212 IHLHLGQAGIQLGESFWGLAEEEFFVDDGRGDRNRGXXXXGRATASPESSSVRMRAGGTAMFHEDGGWARCLAVDSEPKVVQRFQGRVGSLRPENAIFSQSGLANNWAMGFA--------SCRSLGDGEEGAGGPFSRCMEGMRKEAERSSWLNSVVMTHSLAGGTGSGLGSGLLQALRDEYPSLYLFSACVGPFGT-GDTPLQHYNSVLALQHLQAYADCVIYRGNDDLLRGAAETSARR---DAAAPDPSRTMGGEGSGTGGWRPAGILSRRGXXXXXXXXXXXRGMVVSTADMNASLALDMASYFFPTSRPFDRFKPTVQAGSGHRRHXXXXXXXXQETAPRPFDGGCLMAAACPLPGAKFVDLRS 1282
I +H+GQ GIQLG ++W LA A +SP S ++H +GG ARC+ VDSEPKVV + +P + QSG NNWA G+A S R +GEE M +++E E V+TH+L GGTGSGLG +L+ LRD YP Y+ +A V P GD+PLQ+YN++L L+ L D VIY+ ND+LLR A A R A D R V+ AD+N+ A D+A FPT+ AG A RPFD G L+ CP+P AK +D+RS
Sbjct: 3 IQVHVGQCGIQLGAAYWRLA----------------------AASSPAPPSPSSH-----LYHPNGGAARCILVDSEPKVVHSVTSS-SAFQPAHIHVEQSGRGNNWARGYALHLTRGSSSSRPTQEGEE----LVELAMASLQRELETLDCYQGTVVTHALGGGTGSGLGCRVLERLRDVYPKAYVVAASVAPSCLRGDSPLQNYNAILTLRCLHEVVDAVIYKDNDELLRTATHWKAARLENGAVVNDEQR-------------------------------------VTLADLNSLAAADLAGLLFPTTA----------AG-----------------ASRPFDFGKLLQDVCPMPAAKMLDVRS 275
BLAST of mRNA_P-littoralis_Contig60.54.1 vs. uniprot
Match: UPI00112E238B (tubulin delta chain-like n=1 Tax=Rhinatrema bivittatum TaxID=194408 RepID=UPI00112E238B) HSP 1 Score: 156 bits (394), Expect = 4.520e-38 Identity = 97/248 (39.11%), Postives = 127/248 (51.21%), Query Frame = 2
Query: 203 MSCIHLHLGQAGIQLGESFWGLAEEEFFVDDGRGDRN--------------RGXXXXGRATASPESSSVRMRAGGTAM---FHEDGGWARCLAVDSEPKVVQRFQGRV--GSLRPENAIFSQSGLANNWAMGFASCRSLGDGEEGAGGPFSRCMEGMRKEAERSSWLNSVVMTHSLAGGTGSGLGSGLLQALRDEYPSLYLFSACVGPFGTGDTPLQHYNSVLALQHLQAYADCVIYRGNDDLLRGAA 889
MS + L LGQ G QLG +W L E DR+ GR + SS+ +++GG F G L VDSEPKV+++ Q ++ G R N I QSG NNWA G+ S EG R ME +RKE ER + V+ HSL+GGTGSGLG+ L +A+RDEYP Y+ S V P G++PLQHYNS+L+L LQ YAD ++ ND +L+ A
Sbjct: 12 MSAVWLQLGQCGNQLGLEWWQLLTNESAAHQ-ESDRSPFSSSCLSLLRLPRHNILGKGRRGRNCRCSSIGLKSGGHPARYPFFARDGKLSALCVDSEPKVIRKLQKQIKKGVFRDSNLILGQSGRGNNWAYGYHDLHS-----EGETSLLQRTMESLRKEVERRDCYSGTVLLHSLSGGTGSGLGARLCEAIRDEYPLGYILSVTVAPHQAGESPLQHYNSLLSLSWLQRYADGILLFHNDSVLKRTA 253
BLAST of mRNA_P-littoralis_Contig60.54.1 vs. uniprot
Match: A0A7S2GRB2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GRB2_9STRA) HSP 1 Score: 152 bits (384), Expect = 3.210e-37 Identity = 114/363 (31.40%), Postives = 157/363 (43.25%), Query Frame = 2
Query: 212 IHLHLGQAGIQLGESFWGLAEEEFFVDDGRGDRNRGXXXXGRATASPESSSVRMRAGGTAMFHEDGGWARCLAVDSEPKVVQRFQGRVGSL-RPENAIFSQSGLANNWAMGFASCRSLGDGEEGAGGPFSRCMEGMRKEAERSSWLNSVVMTHSLAGGTGSGLGSGLLQALRDEYPSLYLFSACVGPFGTGDTPLQHYNSVLALQHLQAYADCVIYRGNDDLLRGAAETSARRDAAAPDPSRTMGGEGSGTGGWRPAGILSRRGXXXXXXXXXXXRGMVVSTADMNASLALDMASYFFPTSRPFDRFKPTVQAGSGHRRHXXXXXXXXQETAPRPFDGGCLMAAACPLPGAKFVDLRSSLSTG 1297
I +H+GQ G QL FW LAEE+ V R +F ARCL +D+EP+ + + ++ RP N I ++ G NN+A G C S + +G G F+ + R+EAER L SV++THS +GGTGS + L+Q LRD YP +L VGPFG GD+PLQHYN++ + Q + AD V+Y ND+L A P +T GG G GG ++ S +N+ LA D+A FP R Q G G R P D ++ CPL K+++LRSS G
Sbjct: 3 IFVHIGQCGTQLALPFWRLAEED---------------------------RVSSRELWNPLFDPGDSAARCLLIDAEPRAAAQTAASLQNVVRPSNIILAREGRGNNFAFGLQQCMS--ESNQGRG-LFAASTDAFRREAERCDSLRSVILTHSTSGGTGSSTSAALMQHLRDIYPRRWLLPVAVGPFGRGDSPLQHYNTLFSTQAMHILADGVVYTDNDELASSCGRMMMHMKAGQP---KTTGG---GVGGGESDEAFKKKHRSW-------------SLTSLNSLLARDLAVMLFPGRRQ--------QHGGGGRHRTLL-----------PVDLSGVIPRVCPLSQYKWLELRSSSQEG 297
BLAST of mRNA_P-littoralis_Contig60.54.1 vs. uniprot
Match: A0A485L9U2_9STRA (Aste57867_18334 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L9U2_9STRA) HSP 1 Score: 153 bits (386), Expect = 1.560e-36 Identity = 102/290 (35.17%), Postives = 135/290 (46.55%), Query Frame = 2
Query: 419 RCLAVDSEPKVVQ--RFQGRVGSLRPENAIFSQSGLANNWAMGFASCRSLGDGEEGAGGPFSRCMEGMRKEAERSSWLNSVVMTHSLAGGTGSGLGSGLLQALRDEYPSLYLFSACVGPFGTGDTPLQHYNSVLALQHLQAYADCVIYRGNDDLLRGAAETSARRDAAAPDPSRTMGGEGSGTGGWRPAGILSRRGXXXXXXXXXXXRGMVVSTADMNASLALDMASYFFPTSRPFDRFKPTVQAGSGHRRHXXXXXXXXQETAPRPFDGGCLMAAACPLPGAKFVDLRS 1282
RC+ VD+EPKVV+ R V ++ E QSG NNWAMG+ +++ +R ME +R+E E + + HSLAGGTG+GLG LL+++RD YP YL S CV P GDTPLQ+YN++ L+HLQ YAD V+++ NDDL+R A + + A + VS ADMNA LA D A FP + Q R FD G + CP+PGAKFVD+RS
Sbjct: 35 RCILVDTEPKVVRSIRAPAHVATVHME-----QSGRGNNWAMGYNKAKNVD--------LCARVMESLRREIEATDCYRGGFILHSLAGGTGAGLGCRLLESMRDTYPKAYLVSGCVAPSMRGDTPLQNYNALFTLRHLQEYADAVLFKDNDDLVRSVAYWKSTQPA----------------------------------------KESSVSLADMNALLAADWAGLLFPIT---------------------------QNKIRRVFDIGDFVTRVCPIPGAKFVDVRS 244
BLAST of mRNA_P-littoralis_Contig60.54.1 vs. uniprot
Match: A0A7S0LEV1_9EUKA (Tubulin delta chain (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LEV1_9EUKA) HSP 1 Score: 145 bits (366), Expect = 5.160e-36 Identity = 94/234 (40.17%), Postives = 122/234 (52.14%), Query Frame = 2
Query: 167 HP-ADTYWGGEK*MSCIHLHLGQAGIQLGESFWGLAEEEFFVDDGRGDRNRGXXXXGRATASPESSSVRMRAGGTAMFHEDGGWARCLAV--DSEPKVVQRFQGRVGSLRPEN--AIFSQSGLANNWAMGFASCRSLGDGEEGAGGPFSRCMEGMRKEAERSSWLNSVVMTHSLAGGTGSGLGSGLLQALRDEYPSLYLFSACVGPFGTGDTPLQHYNSVLALQHLQAYADCVI 853
HP A T G + M+ ++LH+GQAG ++G +FW LA +E ++ R MF + G RC AV DSEPKVV+ +G R E A+ QSG NNWAMGF G E G +E +R + ER W + + HSL GGTGSGLGS LLQALRD +P YL S CVGPF G+ PL YN+ L+L +LQ +AD ++
Sbjct: 13 HPVARTSSQGRETMATVYLHVGQAGNEIGGAFWTLAAQE-------------------------PATRRW------MFDDRG---RCKAVFLDSEPKVVRGVANSIGVERIERHCALIDQSGRGNNWAMGFH-----GTSEVGGSRVADAALEALRWQWERCDWCSGATLCHSLGGGTGSGLGSLLLQALRDAHPRHYLTSVCVGPFALGELPLSAYNATLSLSYLQEFADALV 207
BLAST of mRNA_P-littoralis_Contig60.54.1 vs. uniprot
Match: V9FMD9_PHYPR (Tubulin domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=V9FMD9_PHYPR) HSP 1 Score: 153 bits (387), Expect = 7.390e-36 Identity = 119/378 (31.48%), Postives = 170/378 (44.97%), Query Frame = 2
Query: 212 IHLHLGQAGIQLGESFWGLAEEEFFV-DDGRGDRNRGXXXXGRATASPESSSVRMRAGGTAM----FHEDGGWARCLAVDSEPKVVQRFQGRVG----SLRPENAIFSQSGLANNWAMGFASCR-----------SLGDGEEGAGGPFSRCMEGMRKEAERSSWLNSVVMTHSLAGGTGSGLGSGLLQALRDEYPSLYLFSACVGPFGT-GDTPLQHYNSVLALQHLQAYADCVIYRGNDDLLRGAAETSARRDAAAPDPSRTMGGEGSGTGGWRPAGILSRRGXXXXXXXXXXXRGMVVSTADMNASLALDMASYFFPTSRPFDRFKPTVQAGSGHRRHXXXXXXXXQETAPRPFDGGCLMAAACPLPGAKFVDLRS 1282
+HLH+GQ G QLG ++W LA + DD R N G R + +S++ ++ FH G ARC+ VDSEPKVV+ F + P + Q+G NNWAMG+ R ++ D E M+ +++E ER V+ HSL GGTGSGLG +L+++RD YP Y+ + V P T GDTPLQ+YN++L L+ LQ AD VIY+ ND+LLR A+ W+ A + R G VS ++N+ A D+A FP + T A + R F+ G L+ CP+P AK +++RS
Sbjct: 3 VHLHVGQCGNQLGAAYWRLAAASGEIHDDKRSQGNTGVSRHLRRASGGSTSTLNGSKKAVSLPRPLFHPSTGAARCILVDSEPKVVRSFMQETTDGATAFEPAHTHVEQTGRGNNWAMGYYGPRLKSPAPTFTSLAVDDRRE----LVELVMDSLQREIERVDCYQGSVVMHSLGGGTGSGLGCRVLESMRDTYPKAYILTTSVAPSCTSGDTPLQNYNAILTLKCLQDVADAVIYKDNDELLRTASY-------------------------WK-AVVHERVGTDNYQR---------VSLEEVNSMAAADLAGLLFPVA--------TGDASTVRR-----------------FNFGKLLHDVCPMPAAKMLEVRS 316 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig60.54.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig60.54.1 >prot_P-littoralis_Contig60.54.1 ID=prot_P-littoralis_Contig60.54.1|Name=mRNA_P-littoralis_Contig60.54.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=621bp MSCIHLHLGQAGIQLGESFWGLAEEEFFVDDGRGDRNRGRGRGGRATASPback to top mRNA from alignment at P-littoralis_Contig60:247696..253514+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig60.54.1 ID=mRNA_P-littoralis_Contig60.54.1|Name=mRNA_P-littoralis_Contig60.54.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5819bp|location=Sequence derived from alignment at P-littoralis_Contig60:247696..253514+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig60:247696..253514+ >mRNA_P-littoralis_Contig60.54.1 ID=mRNA_P-littoralis_Contig60.54.1|Name=mRNA_P-littoralis_Contig60.54.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1863bp|location=Sequence derived from alignment at P-littoralis_Contig60:247696..253514+ (Pylaiella littoralis U1_48)back to top |