mRNA_P-littoralis_Contig60.40.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig60.40.2 vs. uniprot
Match: A0A6H5L717_9PHAE (SMI1_KNR4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L717_9PHAE) HSP 1 Score: 276 bits (707), Expect = 9.060e-91 Identity = 145/199 (72.86%), Postives = 160/199 (80.40%), Query Frame = 1
Query: 247 MTHVAKEGNRRKGGMTGAEITQSVLDVESWFRKNG-GCLDNAEGVHDTDLQALEKAIGASIPEELRKIMSIQDGQLWFSEKKALTCKGMVTEALEMEGRRVPGWRAGLIPFAKDVDDNFLASHGDAAVTDTQAKGCPVADWDTT-GVGAMMAKSFSLFLENFRNELLSGRCEYVEGLGVVEKVAKSN-ASPPRISSNNK 834
MTHVA+EGN RKGGMT EI QSVLDVESWF+K+ GCLDNAEG D D+QALEKA +IPEELR IM+IQDGQLWFSEK+ALTCK MV A +MEGR VPGWRAGLIPFAKDVDDNFL VTDTQA+GCPV +WD G G +A +FSLFLE FRNELL+GRCEYVEGLGVVEK+ KSN +SPPR SN K
Sbjct: 1 MTHVAEEGNPRKGGMTYDEINQSVLDVESWFKKHARGCLDNAEGAQDADIQALEKATDTTIPEELRSIMTIQDGQLWFSEKQALTCKAMVAAAFKMEGR-VPGWRAGLIPFAKDVDDNFL-------VTDTQARGCPVVEWDAADGEGGTVATTFSLFLEGFRNELLAGRCEYVEGLGVVEKITKSNVSSPPR--SNRK 189
BLAST of mRNA_P-littoralis_Contig60.40.2 vs. uniprot
Match: D7G8J0_ECTSI (Ubiquitin family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8J0_ECTSI) HSP 1 Score: 189 bits (481), Expect = 2.410e-57 Identity = 98/134 (73.13%), Postives = 110/134 (82.09%), Query Frame = 1
Query: 421 SIPEELRKIMSIQDGQLWFSEKKALTCKGMVTEALEMEGRRVPGWRAGLIPFAKDVDDNFLASHGDAAVTDTQAKGCPVADWDTT-GVGAMMAKSFSLFLENFRNELLSGRCEYVEGLGVVEKVAKSN-ASPPR 816
+IPEELR IM+IQDGQLWFSEK+ALTCK MV A +MEGR V GWRAGLIPFAKDVDD+FL VTDTQA+GCPV +WD G G +AK+FSLFLE FRNELLSG+CEYVEGLGVVEK+ KSN +SPPR
Sbjct: 4 TIPEELRSIMTIQDGQLWFSEKQALTCKAMVAAAFKMEGR-VSGWRAGLIPFAKDVDDSFL-------VTDTQARGCPVVEWDAADGEGGTVAKTFSLFLEGFRNELLSGQCEYVEGLGVVEKITKSNVSSPPR 129
BLAST of mRNA_P-littoralis_Contig60.40.2 vs. uniprot
Match: A0A7S2V2L4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2L4_9STRA) HSP 1 Score: 139 bits (351), Expect = 2.910e-37 Identity = 74/180 (41.11%), Postives = 108/180 (60.00%), Query Frame = 1
Query: 256 VAKEGNRRKGGMTGAEITQSVLDVESWFRKNGGCLDNAEGVHDTDLQALEKAIGASIPEELRKIMSIQDGQLWFSEKKALTCKGMVTEALEMEGRRVPGWRAGLIPFAKDVDDNFLASHGDAAVTDTQAKGCPVADWDT-TGVGAMMAKSFSLFLENFRNELLSGRCEYVEGLGVVEKVA 792
VA+EGNRRKG ++ AEI Q VLD+ +WFR N CL+ AE V +++Q +EK + A +PE L + + +WF EK + + ++ A ++ GL+P AKDVDDNFL V DT + + +WD +G G+ +A SF+ FLE FRN LLSG+ E+++ G+VE A
Sbjct: 7 VAEEGNRRKGSISTAEIEQCVLDIVTWFRGNTPCLEQAEPVESSEIQQMEKTLDAELPEGLALLFQQTNQGIWFYEKSLMNVQAIMKNAQDIGD--------GLLPIAKDVDDNFL-------VVDTNSPRAALYEWDADSGKGSCVATSFNAFLELFRNNLLSGKYEFIDDTGIVESYA 171
BLAST of mRNA_P-littoralis_Contig60.40.2 vs. uniprot
Match: A0A7S3HIK1_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HIK1_9STRA) HSP 1 Score: 119 bits (299), Expect = 1.660e-29 Identity = 68/179 (37.99%), Postives = 107/179 (59.78%), Query Frame = 1
Query: 256 VAKEGNRRKGGMTGAEITQSVLDVESWFRKNGGCLDNAEGVHDTDLQALEKAIGASIPEELRKIMSIQDGQLWFSEKKALTCKGMVTEALEMEGRRVPGWRAGLIPFAKDVDDNFLASHGDAAVTDTQAKGCPVADWDTT-GVGAMMAKSFSLFLENFRNELLSGRCEYVEGLGVVEKV 789
VA+EGNRR G M+ AE+ Q LD++SWF + EG D Q LEK I +P L+ ++S +G ++F +KK ++ + +EG R W++GL+PFA + D++ L V DT K V +WD++ G+G M+A S +LE++RN++LS R E++E +GV+EK+
Sbjct: 5 VAEEGNRRAGDMSTAEVVQCTLDIKSWFARTSCKKFMVEGATSVDFQRLEKTIDTELPSALKAVLSEINGGIYFMDKKQMSTNQIAECFSRIEGSRQ--WKSGLVPFAGE-DESLL-------VIDT--KHGEVYEWDSSDGLGDMVAPSLEKYLEDYRNDILSRRVEFLEDVGVIEKM 171
BLAST of mRNA_P-littoralis_Contig60.40.2 vs. uniprot
Match: A0A7S1TTP1_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TTP1_9STRA) HSP 1 Score: 116 bits (290), Expect = 6.040e-28 Identity = 65/174 (37.36%), Postives = 97/174 (55.75%), Query Frame = 1
Query: 256 VAKEGNRRKGGMTGAEITQSVLDVESWFRKNGGCLDNAEGVHDTDLQALEKAIGASIPEELRKIMSIQDGQLWFSEKKALTCKGMVTEALEMEGRRVPGWRAGLIPFAKDVDDNFLASHGDAAVTDTQAKGCPVADWDTTGVGAMMAKSFSLFLENFRNELLSGRCEYVEGLGV 777
VA+EGNRR G M+ E Q V+DV SWF+++ D G ++AL K++G +PE L ++ DG +WF +K+ L+ + + ++EG G+R G +P A DVD N L + DT + PV ++D G+G +A S F+E RN LLSG EY+E L +
Sbjct: 5 VAEEGNRRVGSMSAEEQDQCVMDVVSWFQRHSE--DGLRGADRGSVEALRKSLGVDVPEILERLWCEADGGVWFGDKELLSVQRLEKLFADLEGGA--GFREGFLPLATDVDGNLL-------IVDTGSPAMPVFEFDDDGLGDKLAASVVNFMEEQRNNLLSGNFEYIEVLSL 167
BLAST of mRNA_P-littoralis_Contig60.40.2 vs. uniprot
Match: A0A3R7JY01_9STRA (SMI1_KNR4 domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JY01_9STRA) HSP 1 Score: 115 bits (288), Expect = 6.410e-28 Identity = 69/181 (38.12%), Postives = 103/181 (56.91%), Query Frame = 1
Query: 256 VAKEGNRRKGGMTGAEITQSVLDVESWFRKNGGCLDNAEGVHDTDLQALEKAIGASIPEELRKIMSIQDGQLWFSEKKALTCKGMVTEALEMEGRRVPGWRAGLIPFAKDVDDNFLASHGDAAVTDTQAKGCPVADWDTTGVG-AMMAKSFSLFLENFRNELLSGRCEYVEGLGVVEKVAK 795
V +GN RKG M E Q + D+ SWF++ NAE + D++ALEK +G IP LR +++ Q G +WF E K+L+ G++ A + V GW + L PFA +VD G A VTDT + G V +++ G G +A + +LE +RN LLSG+ ++VE +G+VE+ K
Sbjct: 6 VVADGNPRKGAMNEDERDQCIHDIVSWFQRKANLESNAE--KNADIEALEKTLGMEIPGALRSLLTNQSGGIWFDEFKSLSADGIINTAETLAS--VKGWDSALTPFATNVD-------GAALVTDTSS-GDAVFEFNEDGKGDRSLAPTLWEYLEQYRNRLLSGKFDFVEDVGLVERSRK 174
BLAST of mRNA_P-littoralis_Contig60.40.2 vs. uniprot
Match: D0NJD7_PHYIT (SMI1_KNR4 domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=D0NJD7_PHYIT) HSP 1 Score: 115 bits (287), Expect = 8.990e-28 Identity = 67/181 (37.02%), Postives = 104/181 (57.46%), Query Frame = 1
Query: 256 VAKEGNRRKGGMTGAEITQSVLDVESWFRKNGGCLDNAEGVHDTDLQALEKAIGASIPEELRKIMSIQDGQLWFSEKKALTCKGMVTEALEMEGRRVPGWRAGLIPFAKDVDDNFLASHGDAAVTDTQAKGCPVADWDTTGVGAM-MAKSFSLFLENFRNELLSGRCEYVEGLGVVEKVAK 795
V EGN RKG M E Q + D+ SWF++ AE + D++ALEK +G IPEELR ++ Q G +WF + K+L+ ++ +A + + GW + L+PFA +VD G A V+DT ++ V +++ G G +A S +LE +RN LLSG+ ++VE +G+VE+ K
Sbjct: 6 VVAEGNPRKGAMDVDERDQCIHDIVSWFQRKANLESAAE--KNADIEALEKTLGKEIPEELRSLLMTQSGGIWFDDYKSLSADDIINKAETLAS--IKGWDSSLVPFAVNVD-------GGALVSDTGSRNA-VFEFNEDGKGDRPLAPSLLEYLEKYRNRLLSGKFDFVEDVGLVERSRK 174
BLAST of mRNA_P-littoralis_Contig60.40.2 vs. uniprot
Match: A0A485KPF0_9STRA (Aste57867_10068 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KPF0_9STRA) HSP 1 Score: 114 bits (284), Expect = 2.700e-27 Identity = 64/182 (35.16%), Postives = 104/182 (57.14%), Query Frame = 1
Query: 253 HVAKEGNRRKGGMTGAEITQSVLDVESWFRKNGGCLDNAEGVHDTDLQALEKAIGASIPEELRKIMSIQDGQLWFSEKKALTCKGMVTEALEMEGRRVPGWRAGLIPFAKDVDDNFLASHGDAAVTDTQAKGCPVADWDTTGVGAMMAKSFSLFLENFRNELLSGRCEYVEGLGVVEKVAKS 798
HV +EGNRRKGGM+ E Q +LD+ SWF++ L G+ +++ALEKA+ A++P+ L ++ Q+G ++F+E K+L+ +++ + + W+ G IP A D D G V DT+ G V + +G + S + + E +RNELLSG ++VE +G+VE+ KS
Sbjct: 5 HVVEEGNRRKGGMSSEETEQCILDIISWFQRKKAALPKG-GMDPQEVEALEKALDATVPKALAFLLEKQNGGIYFNEYKSLSLDEIISTS--ETNQTWDSWKRGYIPLAADAD-------GALVVVDTK-HGNAVHELTEESLGRELGPSLTAYFETYRNELLSGNYDFVEDVGLVERSQKS 175
BLAST of mRNA_P-littoralis_Contig60.40.2 vs. uniprot
Match: G4YZV6_PHYSP (SMI1_KNR4 domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=G4YZV6_PHYSP) HSP 1 Score: 111 bits (278), Expect = 1.900e-26 Identity = 65/181 (35.91%), Postives = 102/181 (56.35%), Query Frame = 1
Query: 256 VAKEGNRRKGGMTGAEITQSVLDVESWFRKNGGCLDNAEGVHDTDLQALEKAIGASIPEELRKIMSIQDGQLWFSEKKALTCKGMVTEALEMEGRRVPGWRAGLIPFAKDVDDNFLASHGDAAVTDTQAKGCPVADWDTTGVGAM-MAKSFSLFLENFRNELLSGRCEYVEGLGVVEKVAK 795
V GN RKG M E Q + D+ SWF++ E + D++ALEK +G IPEELR +++ Q G +WF + K+L+ ++ +A + + GW + IPFA +VD G A +TDT A+ V +++ G G +A + +LE +RN LLSG+ ++VE +G+VE+ K
Sbjct: 6 VVAGGNPRKGAMDVDERDQCIRDIVSWFQRKADLEPAVE--KNADIEALEKTLGMEIPEELRSLLTTQSGGIWFDDYKSLSADDIINKAESLGS--IKGWESLFIPFAANVD-------GGALITDTSARNA-VFEFNEDGKGDRPLAPTLLEYLEKYRNRLLSGKFDFVEDVGLVERSRK 174
BLAST of mRNA_P-littoralis_Contig60.40.2 vs. uniprot
Match: F0WK21_9STRA (Uncharacterized protein AlNc14C128G6875 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WK21_9STRA) HSP 1 Score: 110 bits (275), Expect = 5.670e-26 Identity = 69/182 (37.91%), Postives = 97/182 (53.30%), Query Frame = 1
Query: 256 VAKEGNRRKGGMTGAEITQSVLDVESWFRKN-----GGCLDNAEGVHDTDLQALEKAIGASIPEELRKIMSIQDGQLWFSEKKALTCKGMVTEALEMEGRRVPGWRAGLIPFAKDVDDNFLASHGDAAVTDTQAKGCPVADWDTTGVGAMMAKSFSLFLENFRNELLSGRCEYVEGLGVVEK 786
V +GNRRKGGM E Q V D+ +WF +N GG DNA+ +L++LE + +P L ++ Q G +WF E K LT KG+ W A IPFA D D + L + DT+ KG V+ + G G ++ SFS FLE+F N+LLS R +V+G+G+VE+
Sbjct: 6 VVTDGNRRKGGMNDHEQKQCVHDIVNWFARNANLEIGG--DNAD-----ELKSLEDDLELQLPAGLSTLLETQSGGIWFEESKLLTVKGIRDTTSTSSAHS--NWNAAYIPFASDTDGSLL-------IVDTK-KGDAVSFFHEDGKGKKVSASFSQFLEDFCNQLLSNRFSFVQGVGLVER 170 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig60.40.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig60.40.2 >prot_P-littoralis_Contig60.40.2 ID=prot_P-littoralis_Contig60.40.2|Name=mRNA_P-littoralis_Contig60.40.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=203bp MTHVAKEGNRRKGGMTGAEITQSVLDVESWFRKNGGCLDNAEGVHDTDLQback to top mRNA from alignment at P-littoralis_Contig60:187982..191745+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig60.40.2 ID=mRNA_P-littoralis_Contig60.40.2|Name=mRNA_P-littoralis_Contig60.40.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=3764bp|location=Sequence derived from alignment at P-littoralis_Contig60:187982..191745+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig60:187982..191745+ >mRNA_P-littoralis_Contig60.40.2 ID=mRNA_P-littoralis_Contig60.40.2|Name=mRNA_P-littoralis_Contig60.40.2|organism=Pylaiella littoralis U1_48|type=CDS|length=609bp|location=Sequence derived from alignment at P-littoralis_Contig60:187982..191745+ (Pylaiella littoralis U1_48)back to top |