mRNA_P-littoralis_Contig6.268.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig6.268.1 vs. uniprot
Match: D7FIL2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIL2_ECTSI) HSP 1 Score: 685 bits (1768), Expect = 3.050e-235 Identity = 401/657 (61.04%), Postives = 453/657 (68.95%), Query Frame = 2
Query: 335 SIRPNPIAALIRQGAEEAGRLQGGSRATTKVQRMINSLQWRQAHSKDEIYPLPLESGVILEFRQLQAGEVTGLGTGATVWPAAHVLAKYLELRFGQNKTNTIGSVEGMGGMAGLRAVDLGSGTGVAGIVAAALGAEAFLTDQVQLLFLMQENADRAXXXXXXXXXXXSGTPKATLMDDKLGANAEMHFAAXXXXXXXXXDPTTADDIPTTTCGKIRVLTYDWGMDDDRLSPPLDVVLVSDCVLPKLYPIEPLVDAIDRLSGPETVTIMSYEHRHYQAFDPRRRFEELAAAKGLVKSVIPQAQQHPIFSADDIEIWEVRRRQGQQQQQPQWADSHRQQNTARVVGDTERQPVQEEIMGTDHDILILSTLSPKSLSSSSSCREPPAEATAVGLAMT---GAAATSEVRTATAVGIMGERHVLTQAPSGAXXXXXXXXXXXXGEATEDGGPLASAGATTTRSTCREGA---------------LNQYPPHARALELGSGVGLVTMTAALLGWEVVGTDKSDALPILELNTTRCLSSTRRTSIGNVEVVEYDWGADAHNLLAGRNG---GVPAGYDVVMCADCVYARASVEPLLESLLQVCDESTVVLVTNELRSAFDEFLQRARALEFEVEDVHVPEAQMVVDATSNQRPKPVALKRLRR 2242
+ RPNPIA LIRQGAEEAGRLQG SRA TKVQRMINSLQWRQAHSKD+IYPLPLESGV+LEFRQLQAGEVTGLGTGATVWPAAHVLAKYLE RFG N G GGM GLRAVDLG+GTGVAGIVAAALGAEAFLTDQ QLLFLMQENADRA A E A+ D TTA C +RVLTYDWG DD LSPP+D+VLVSDCVLPKLYPIEPLVDAIDRLSGP+TVTIMSYEHRHY FDPRRRFEELAAAKGLVK++IPQA+QHPIFSADDIEIWEV+RR +Q +Q + + ++A G T+ + V E+ +++++I S SP + S RE GL+ T G AA T VGI+GERH LTQ PSG P +A + R + +G L++ P ALELGSGVGLV MTAALLGWE V +DK+DALP+LELN RC+SST+RT G V+V+EYDWG DA LL GRN G YD+V+CADCVYA ASVEPLL SL QVCD++TVVLVTNELRSAFDEF++ AR L F+VEDVHVPEAQMVVDA++NQRPKPVALKRLRR
Sbjct: 5 TCRPNPIATLIRQGAEEAGRLQGSSRAATKVQRMINSLQWRQAHSKDDIYPLPLESGVVLEFRQLQAGEVTGLGTGATVWPAAHVLAKYLERRFG----NDGGGGGRRGGMEGLRAVDLGAGTGVAGIVAAALGAEAFLTDQEQLLFLMQENADRAT------------------------AEREKQKAS---------DATTAG----VACDGVRVLTYDWGKDDASLSPPVDIVLVSDCVLPKLYPIEPLVDAIDRLSGPDTVTIMSYEHRHYPEFDPRRRFEELAAAKGLVKTIIPQARQHPIFSADDIEIWEVQRR--RQPRQDGASCQANETSSAATEGSTQAESVFAEMPANENEVVIFS--SPPTTPPCDSSREDET----AGLSATEAPGVAAAGAAEARTVVGILGERHELTQTPSGVLGSYLWPSAVVMARHIVSTAPGIAAAVSHARGSSSDGGSLENCSVGPPPCGEPLHRDPARVSALELGSGVGLVAMTAALLGWEFVASDKADALPLLELNVKRCVSSTKRTCAGTVDVMEYDWGTDAKRLLEGRNSSGSGDGTSYDLVICADCVYASASVEPLLASLCQVCDDNTVVLVTNELRSAFDEFVRGARVLGFQVEDVHVPEAQMVVDASTNQRPKPVALKRLRR 612
BLAST of mRNA_P-littoralis_Contig6.268.1 vs. uniprot
Match: A0A7S2S3X8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S3X8_9STRA) HSP 1 Score: 244 bits (624), Expect = 2.700e-68 Identity = 211/607 (34.76%), Postives = 276/607 (45.47%), Query Frame = 2
Query: 455 RQAHSKDEIYPLPLESGVILEFRQLQAGEVTGLGTGATVWPAAHVLAKYLELRFGQNKTNTIGSVEGMGGMAGLRAVDLGSGTGVAGIVAAALGAEAFLTDQVQLLFLMQENADRAXXXXXXXXXXXSGTPKATLMDDKLGANAEMHFAAXXXXXXXXXDPTTADDIPTTTCGKIRVLTYDWGMDDDRLSP-PLDVVLVSDCVLPKLYPIEPLVDAIDRLSGPETVT-----IMSYEHRHYQAFDPRRRFEELAAAKGLVKSVIPQAQQHPIFSADDIEIWEVRRRQGQQQQQPQWADSHRQQNTARVVGDTERQPVQEEIMGTDHDILILSTLSPKSLSSSSSCREPPAEATAVGLAMTGAAATSEVRTATAVGIMGERHVLTQAPSGAXXXXXXXXXXXXGEATEDGGPLASAGATTTRSTCREGALNQYPPHARALELGSGVGLVTMTAALLGWEVVGTDKSDALPILELNTTRCLSSTRRTSIGNVEVVEYDWGADAHNLLAGRNGGVPAGYDVVMCADCVYARASVEPLLESLLQVC-------DESTVVLVTNELRSAFDEFLQRARALEFEVEDVHVPEAQMVVDATSNQRPKPVALKRL 2236
R AH+++ YP+ L +G+ L FRQL+ GE++GLGTGATVWPAAHVLAKYLE RFG+ G+ G R V++G+GTG G+ AAALGAEA L+DQ QL FLMQENA R G P T V +YDWG DD L P P D+VLVSDC+LPKLY IEPLV+A+ L+ P T ++SYEHR YQ +DPRRRF EL A G +P A ++ ADDIEIWE+ +WA ARV + P M D I L A ++VR GE V S AS+ A R +++ AR LELG+GVGLV++ A LG EVV TDK+ ALP+L N + + G+++V+E+DW + + G+D+V+CADC+YA V LL ++ V S V+V NE RSA D F+ A F V +P+ VD + +P+ V + L
Sbjct: 2 RFAHAEE--YPMEL-AGLQLSFRQLENGELSGLGTGATVWPAAHVLAKYLEKRFGRE------------GLRGRRVVEIGAGTGAVGLAAAALGAEATLSDQEQLAFLMQENAARLEAV---------GAPSVT------------------------------------------VCSYDWGGDDAHLDPLPFDLVLVSDCILPKLYAIEPLVEALQALAKPRGATPGGQVLVSYEHRTYQYYDPRRRFAELVTAAGFNIRSVPLADHDELYRADDIEIWEL-----------EWAGPE----AARV---STYGP-----MVADFHIAAL------------------------------AGDVTQVR-------FGETEVRLDGCSDGQGISEYLW--------------ASSIAIAQRFVADAASVSG----ARVLELGAGVGLVSVVCACLGAEVVATDKATALPVLRKNAAQLGPACA----GSIQVLEFDWTKPTPSAILDG-----PGFDIVVCADCIYASHVVHSLLAAVEAVTAIGGEEVGRSCYVIVANEQRSALDTFMSAAWKT-FRV----LPKGSTEVDLPNFGQPRAVGMYEL 450
BLAST of mRNA_P-littoralis_Contig6.268.1 vs. uniprot
Match: A0A1V9Y5E7_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Y5E7_9STRA) HSP 1 Score: 188 bits (478), Expect = 1.270e-50 Identity = 121/314 (38.54%), Postives = 156/314 (49.68%), Query Frame = 2
Query: 353 IAALIRQGAEEAGRLQGGSRATTKVQRMINSLQWRQAHSKDEIYPLPLESGVILEFRQLQAGEVTGLGTGATVWPAAHVLAKYLELRFGQNKTNTIGSVEGMGGMAGLRAVDLGSGTGVAGIVAAALGAEAFLTDQVQLLFLMQENADRAXXXXXXXXXXXSGTPKATLMDDKLGANAEMHFAAXXXXXXXXXDPTTADDIPTTTCGKIRVLTYDWGMD-DDRLSPPLDVVLVSDCVLPKLYPIEPLVDAIDRLSGPETVTIMSYEHRHYQAFDPRRRFEELAAAKGLVKSVIPQAQQHPIFSADDIEIWEVRR 1291
I +IR GA +A R + K+ + SL WR A+ + +PL+ G +L RQL GEV GLGTG TVWPAA VL KYLE RFG + +R ++LG GTG G+ AA LGA LTDQ Q+ FLM ENA ++ A +H A YDWG L+ P D+VL+SDC+LPKLYPIEPLV AI L T ++S+EHR++ FDP+ RF L +A GL +P +QHP ++ DDIEIWE+ R
Sbjct: 3 ILDVIRGGAHDAS-----LRGSPKLSPAMRSLSWRDAYINRPEFSMPLDGGRVLRIRQLSNGEVNGLGTGLTVWPAACVLLKYLEHRFGY--------------LDDMRVLELGCGTGAVGLAAALLGASVVLTDQEQIQFLMHENA-------------------------RINAAEGVHVCA-----------------------------YDWGSPLHGVLAAPFDLVLISDCILPKLYPIEPLVQAIMLLCRGSTKVLVSFEHRYFPLFDPKVRFWTLVSAAGLELRNVPLPEQHPSYNVDDIEIWEISR 243
BLAST of mRNA_P-littoralis_Contig6.268.1 vs. uniprot
Match: W4GH43_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GH43_9STRA) HSP 1 Score: 176 bits (447), Expect = 2.840e-46 Identity = 114/319 (35.74%), Postives = 159/319 (49.84%), Query Frame = 2
Query: 344 PNPIAALIRQGAEEAGRLQGGSRATTKVQRMINSLQWRQAHSKDEIYPLPLESGVILEFRQLQAGEVTGLGTGATVWPAAHVLAKYLELRFGQNKTNTIGSVEGMGGMAGLRAVDLGSGTGVAGIVAAALGAEAFLTDQVQLLFLMQENADRAXXXXXXXXXXXSGTPKATLMDDKLGANAEMHFAAXXXXXXXXXDPTTADDIPTTTCGKIRVLTYDWGMDDDRL---SPPLDVVLVSDCVLPKLYPIEPLVDAIDRL--SGPETVTIMSYEHRHYQAFDPRRRFEELAAAKGLVKSVIPQAQQHPIFSADDIEIWEV 1285
P I ++R+GA+ + Q A++K+ R + SL WR A + +P+ + +L+ RQ GE+ GLGTG TVWPAA VL KYLE + + G+ G R V+LG GTG G+ AA LGA LTDQ +LF +Q N A+D+ + YDWG ++ P+D+VL+SDCVLPKLYPIEPLVDAI+ L S P TV ++S+EHR+Y+ +D + F L A + L ++P HP ++ADDIEIWE+
Sbjct: 2 PVNILDVLREGAQRSNLRQ----ASSKMGRAMQSLVWRDAFINRADFSIPVGTSHVLQVRQAPNGEINGLGTGLTVWPAACVLLKYLEHHYAPSN-----------GLQGKRVVELGCGTGAVGLAAAMLGAHVVLTDQAHILFHIQANVQ-------------------------------------------------ANDV-----AGVEFCAYDWGAPLPQVVAGRKPVDIVLISDCVLPKLYPIEPLVDAINLLCASQPSTVVLVSFEHRYYEHYDAKDMFWTLVAQRHLTIRMVPLEAHHPSYNADDIEIWEI 251
BLAST of mRNA_P-littoralis_Contig6.268.1 vs. uniprot
Match: A0A8K1CRT5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CRT5_PYTOL) HSP 1 Score: 172 bits (437), Expect = 2.990e-44 Identity = 117/292 (40.07%), Postives = 152/292 (52.05%), Query Frame = 2
Query: 443 SLQWRQAHSKDEIYPLPLESGVILEFRQLQAGEVTGLGTGATVWPAAHVLAKYLELRFGQ-NKTNTIGSVEGMGGMAGLRAVDLGSGTGVAGIVAAALGAE-AFLTDQVQLLFLMQENADRAXXXXXXXXXXXSGTPKATLMDDKLGANAEMHFAAXXXXXXXXXDPTTADDIPTTTCGKIRVLTYDWG-------MDDDRLSPPLDVVLVSDCVLPKLYPIEPLVDAIDRLSGPETVTIMSYEHRHYQAFDPRRRFEELAAAKGLVKSVIPQAQQHPIFSADDIEIWEVRR 1291
+L WR A + + + + G L +QL GE+TG GTG TVWPAA +L K+LE R+G+ + ++T S+E V+LG GTGV GI AA LGA+ LTD +LLFL+Q NAD A D G I V TYDWG + +D SP D V++SDC+LPKLYPIEPLV+A+DRL+G T ++SYEHRHY+ F P+ +F EL A+G I Q+ HP + ADDIEIWE R
Sbjct: 70 ALSWRNAQALEPFFEETV-CGQTLRVKQLLQGELTGFGTGLTVWPAACMLLKHLEHRYGRGSNSSTEASLESK------LVVELGCGTGVVGIAAAMLGAKRVVLTDVQKLLFLLQMNADLAR--------------------DLSGGRTN-----------------------------IEVETYDWGASPSARLLTEDGSSP--DFVVISDCILPKLYPIEPLVEALDRLTGINTTVLISYEHRHYEQFHPKLKFWELLTARGFEIREIDQSLYHPQYYADDIEIWEAHR 303
BLAST of mRNA_P-littoralis_Contig6.268.1 vs. uniprot
Match: A0A6G0WHN7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WHN7_9STRA) HSP 1 Score: 170 bits (431), Expect = 6.220e-44 Identity = 117/313 (37.38%), Postives = 160/313 (51.12%), Query Frame = 2
Query: 353 IAALIRQGAEEAGRLQGGSRATTKVQRMINSLQWRQAHSKDEIYPLPLESGVILEFRQLQAGEVTGLGTGATVWPAAHVLAKYLELRFGQNKTNTIGSVEGMGGMAGLRAVDLGSGTGVAGIVAAALGAEAFLTDQVQLLFLMQENADRAXXXXXXXXXXXSGTPKATLMDDKLGANAEMHFAAXXXXXXXXXDPTTADDIPTTTCGKIRVLTYDWGMD-DDRLSPPLDVVLVSDCVLPKLYPIEPLVDAIDRLSGPETVTIM-SYEHRHYQAFDPRRRFEELAAAKGLVKSVIPQAQQHPIFSADDIEIWEV 1285
I ++R+GA ++ L+G T+ + + I SL WR + + +PL S L RQL GE+ GLGTG TVWPAA VL KYLE + + G+ G R V+LG GTG G+ AA LG+ LTDQ Q+LF + EN KA M TAD V Y+WG L+ P+DVVL+SDC+LPKLYP+EPLVDAI L ++V ++ S+E+R+Y+ FDP+ F L +GL+ +P + HP ++ADDIEIWE+
Sbjct: 5 IMDVLREGALDSN-LRG---RTSNMGKAIQSLVWRDSFINQAEFSIPLASRE-LRIRQLPNGEINGLGTGLTVWPAACVLLKYLEHHYAPSN-----------GLVGKRVVELGCGTGAVGLAAAMLGSHVILTDQEQILFHIDENV------------------KANHM--------------------------TAD-----------VCAYNWGEPLSGPLATPVDVVLISDCILPKLYPVEPLVDAIALLCTRDSVVVLISFEYRYYEHFDPKSMFWSLIKQRGLIIRGVPIEEHHPKYNADDIEIWEI 246
BLAST of mRNA_P-littoralis_Contig6.268.1 vs. uniprot
Match: A0A7R9YB07_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YB07_9STRA) HSP 1 Score: 175 bits (443), Expect = 1.970e-43 Identity = 116/327 (35.47%), Postives = 163/327 (49.85%), Query Frame = 2
Query: 335 SIRPNPIAALIRQGAEEAGRLQGGSRATTKVQRMINSLQWRQAHSKDEIYPLPLES-GVILEFRQLQAGEVTGLGTGATVWPAAHVLAKYLELRFGQNKTNTIGSV-EG------MGGMAGLRAVDLGSGTGVAGIVAAALGAEAFLTDQVQLLFLMQENADRAXXXXXXXXXXXSGTPKATLMDDKLGANAEMHFAAXXXXXXXXXDPTTADDIPTTTCGKIRVLTYDWGMDDDRLSPPLDVVLVSDCVLPKLYPIEPLVDAIDRLSGPETVTIMSYEHRHYQAFDPRRRFEELAAAKGLVKSVIPQAQQHPIFSADDIEIWEVRR 1291
S R +P +R G + T + + LQWRQA + + + L S + Q+ GE +GLGTGA VWPAA VL Y+E G + I + +G + +AG R VD+G+GTG+ GI AA LGA A + DQ QLL + +N +R + AA + G +RV +DWG+++ L PP++++ VSDCVLPKLYPIEPLV+AID L G + + +SYE R++Q FDP++RF EL AAKG+ +P + A+DIEIW RR
Sbjct: 20 SARVSPFLTALRSGEVQN---------TGAIGDRLRQLQWRQAFTGRDHFDFCLRSVDTEISVAQVADGETSGLGTGANVWPAAQVLMAYMEQFQGDELPDAISELLDGEERRFAVPKLAGKRVVDVGAGTGILGIAAACLGANAVVCDQGQLLEFLAQNVER-------------------------------NSAAV-----------------ASRGGSVRVQQHDWGVNEAALDPPVEIIFVSDCVLPKLYPIEPLVEAIDGLLGEDGLVFLSYERRYFQHFDPKKRFAELCAAKGVAVETVPFRFHAAAYRAEDIEIWVGRR 289
BLAST of mRNA_P-littoralis_Contig6.268.1 vs. uniprot
Match: A0A7S2WAF7_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WAF7_9STRA) HSP 1 Score: 166 bits (421), Expect = 7.610e-43 Identity = 116/299 (38.80%), Postives = 155/299 (51.84%), Query Frame = 2
Query: 410 RATTKVQRMINSLQWRQAHSKDEIYPLPLESGVILEFRQLQAGEVTGL-GTGATVWPAAHVLAKYLELRFGQNKTNTIGSVEGMGGMAGLRAVDLGSGTGVAGIVAAALGAEAFL--TDQVQLLF-LMQENADRAXXXXXXXXXXXSGTPKATLMDDKLGANAEMHFAAXXXXXXXXXDPTTADDIPTTTCGKIRVLTYDWGMDDDRLSPPLDVVLVSDCVLPKLYPIEPLVDAIDRLSGPETVTIMSYEHRHYQAFDPRRRFEELAAAKGLVKSVIPQAQQHPIFSADDIEIWEVRRR 1294
R T++ ++ SL WR +S+ YP+ + V Q+Q GEV GTGATVWPA+ VL KYLE + + N R VDLG+GTGV I AA L + + + TD ++ L ++N +R A+A + + +I+V TY WG D D+VL+SDCVLPKLYPI PLVDAID LSGPET+T MSYE R+Y FDPR +F +LA AK L V+P+ +QH I+S +DIEIWEV+R+
Sbjct: 4 RKNTRLDQLQRSLGWRNHYSQSCEYPVSVLD-VRFNVCQVQRGEVENTYGTGATVWPASMVLTKYLEKTLCRGERNK-------------RVVDLGAGTGVTSIAAALLLSSSSIVCTDGCDMVVQLAKKNVERL-------------------------ASACLSNGSCWIINQ----------------NEIKVQTYQWG-DGSLGDIAFDIVLISDCVLPKLYPISPLVDAIDELSGPETITYMSYEQRYYPDFDPREKFFQLANAKNLYVRVVPREEQHHIYSLEDIEIWEVKRK 246
BLAST of mRNA_P-littoralis_Contig6.268.1 vs. uniprot
Match: A0A7S4J5J0_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J5J0_9STRA) HSP 1 Score: 169 bits (429), Expect = 1.030e-41 Identity = 135/364 (37.09%), Postives = 170/364 (46.70%), Query Frame = 2
Query: 431 RMINSLQWRQAHSKDEIYPLPLE-----------SGVI-----------------LEF--RQLQAGEVTGL-GTGATVWPAAHVLAKYLEL----RFGQNKTNTIGSVE-GMGG--------MAGLRAVDLGSGTGVAGIVAAALGAEAFL-TDQVQLLF-LMQENADRAXXXXXXXXXXXSGTPKATLMD------DKLGANAEMHFAAXXXXXXXXXDPTTADDIPTTTCGKIRVLTYDWGMDDDRLSPPL-----------------------DVVLVSDCVLPKLYPIEPLVDAIDRLSGPETVTIMSYEHRHYQAFDPRRRFEELAAAKGLVKSVIPQAQQHPIFSADDIEIWEVRRRQ 1297
R SL WR HS+ E YP+ +E G EF RQ+Q GE GTGATVWPA+ VL KY+E G+ +T E G GG G DLG+GTGV + AAALGA + TD L+ L ++NA RA + +L D D+LG + + T + + C ++RV Y WG DD+ + L D +LVSDCVLPKLYPI PLV AI RL+GPET+T +SYEHR+Y AFDP+ F LA +GL V+PQ HPI+S DDIE+WEVRRRQ
Sbjct: 94 RKAQSLGWRNRHSQAEFYPVSMELPPTRLSDPRGDGATEATSNAASPHRRIRRRRAEFSVRQVQRGETENTYGTGATVWPASMVLLKYMEALQPTTGGRGSGDTCSDNEAGEGGPPFSSSSPFEGKTVADLGAGTGVTSVAAAALGASLVVCTDGCDLVVELAEQNARRACGELAGGCLGEE--VRGSLADSGGEGPDELGGGRFTGSTSSTSSAKGGNE--TGEKMTIGQC-ELRVRKYWWGEDDESMLQELADECNNSRDSLRIEASMQNQRYYDYLLVSDCVLPKLYPIGPLVGAISRLTGPETITYLSYEHRYYPAFDPKEEFSRLAEEEGLEVRVVPQKDHHPIYSVDDIEVWEVRRRQ 452
BLAST of mRNA_P-littoralis_Contig6.268.1 vs. uniprot
Match: A0A3R6YSQ8_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6YSQ8_9STRA) HSP 1 Score: 160 bits (406), Expect = 9.720e-41 Identity = 112/307 (36.48%), Postives = 145/307 (47.23%), Query Frame = 2
Query: 431 RMINSLQWRQAHSKDEIYPLPLESGVILEFRQLQAGEVTGLGTGATVWPAAHVLAKYLELRFGQNKTNTIGSVEGMGGMAGLRAVDLGS-----------------GTGVAGIVAAALGAEAFLTDQVQLLFLMQENADRAXXXXXXXXXXXSGTPKATLMDDKLGANAEMHFAAXXXXXXXXXDPTTADDIPTTTCGKIRVLTYDWGM---DDDRLSPPLDVVLVSDCVLPKLYPIEPLVDAIDRL--SGPETVTIMSYEHRHYQAFDPRRRFEELAAAKGLVKSVIPQAQQHPIFSADDIEIWEV 1285
R + SL WR + + +P+ S L RQ+ GE++GLGTG TVWPAA VL KYLE R+ + G+ G R V+LG GTG GI AA LGA+ LTDQ Q+LF +Q N +H A+D+ ++ YDWG D P+D+VL+SDCVLPKLYPIEPLVDAI L S P TV ++S+EHR Y+ FD + F + A + L +P HP ++ADDIEIWEV
Sbjct: 3 RALQSLVWRDSFINHAEFSIPVGSNQTLRVRQVPNGEISGLGTGLTVWPAACVLLKYLEHRYAPSN-----------GLQGKRVVELGKARRQMLQFTLSIFGAGCGTGAVGIAAAMLGAQVVLTDQAQILFHIQAN---------------------------------IH----------------ANDV-----AGVKYCAYDWGAPLPDLIATGGPVDMVLISDCVLPKLYPIEPLVDAICLLCASEPRTVVLVSFEHRFYEQFDAKEMFWSVVAQRRLCIREVPVETHHPDYNADDIEIWEV 244 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig6.268.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig6.268.1 >prot_P-littoralis_Contig6.268.1 ID=prot_P-littoralis_Contig6.268.1|Name=mRNA_P-littoralis_Contig6.268.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=683bp MVTPELTTTTTTTTMLQGEEDEEIDHVQHERFRSIRPNPIAALIRQGAEEback to top mRNA from alignment at P-littoralis_Contig6:1073738..1078209- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig6.268.1 ID=mRNA_P-littoralis_Contig6.268.1|Name=mRNA_P-littoralis_Contig6.268.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4472bp|location=Sequence derived from alignment at P-littoralis_Contig6:1073738..1078209- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig6:1073738..1078209- >mRNA_P-littoralis_Contig6.268.1 ID=mRNA_P-littoralis_Contig6.268.1|Name=mRNA_P-littoralis_Contig6.268.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2049bp|location=Sequence derived from alignment at P-littoralis_Contig6:1073738..1078209- (Pylaiella littoralis U1_48)back to top |