mRNA_P-littoralis_Contig6.212.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig6.212.2 vs. uniprot
Match: A0A6H5KEB2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEB2_9PHAE) HSP 1 Score: 303 bits (777), Expect = 7.840e-102 Identity = 163/203 (80.30%), Postives = 172/203 (84.73%), Query Frame = 1
Query: 19 VRRLLLMSTVMVSSFLHSSRSRIPPLLVERRNWLSRSKSISSRSNY--RRQELTCGLQITVRIRGKKSREQDYTNQAYDEYVKRLRPVLALDTQWHKTDEDLEAAVRKDTGVVVCLDEGGRQMNSQAFSEFVFSKLEEGGSRLTFVVGGAEGLPPGLKSKPPHGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHKE 621
V LL ST VSS +HS + L E W RS S + R + R++ELTCGLQITVRIRGKKSRE+DYTNQAYDEY KRLRPVLALDTQWHKTD+DLEAAVRKD GVVVCLDEGGRQMNS AFS+FVFSKLEEGGSRLTFVVGGAEGLPPGLK KPPHGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHKE
Sbjct: 10 VSALLATSTTFVSSLVHSRST--TQLSRESSAWRRRSPSGTRRYSETGRKRELTCGLQITVRIRGKKSREEDYTNQAYDEYAKRLRPVLALDTQWHKTDDDLEAAVRKDPGVVVCLDEGGRQMNSPAFSDFVFSKLEEGGSRLTFVVGGAEGLPPGLKQKPPHGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHKE 210
BLAST of mRNA_P-littoralis_Contig6.212.2 vs. uniprot
Match: D7FIP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIP1_ECTSI) HSP 1 Score: 247 bits (630), Expect = 8.420e-80 Identity = 121/130 (93.08%), Postives = 125/130 (96.15%), Query Frame = 1
Query: 232 TNQAYDEYVKRLRPVLALDTQWHKTDEDLEAAVRKDTGVVVCLDEGGRQMNSQAFSEFVFSKLEEGGSRLTFVVGGAEGLPPGLKSKPPHGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHKE 621
+ QAYDEY KRLRPVLALDTQWHKTD+DLEAAVRKD GVVVCLDEGGRQMNS AFS+F+FSKLEEGGSRLTFVVGGAEGLPPGLK KPPHGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHKE
Sbjct: 60 SKQAYDEYAKRLRPVLALDTQWHKTDDDLEAAVRKDPGVVVCLDEGGRQMNSPAFSDFLFSKLEEGGSRLTFVVGGAEGLPPGLKQKPPHGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHKE 189
BLAST of mRNA_P-littoralis_Contig6.212.2 vs. uniprot
Match: W7TG35_9STRA (Ribosomal rna large subunit methyltransferase h n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TG35_9STRA) HSP 1 Score: 184 bits (468), Expect = 6.270e-55 Identity = 89/149 (59.73%), Postives = 114/149 (76.51%), Query Frame = 1
Query: 175 CGLQITVRIRGKKSREQDYTNQAYDEYVKRLRPVLALDTQWHKTDEDLEAAVRKDTGVVVCLDEGGRQMNSQAFSEFVFSKLEEGGSRLTFVVGGAEGLPPGLKSKPPHGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHKE 621
CGLQ+T+ IRGK+S +++ N AY EY KRLRPVL L T WHKTD +LEAA+ K+ V+CLDEGG+Q++S ++ ++ +LEEGG+RL+ V+GGAEGLPP L++ SLS +TFTH WAR LLAEQIYRASEI+RGS YHKE
Sbjct: 69 CGLQVTIHIRGKRSGGEEFLNDAYLEYTKRLRPVLGLTTVWHKTDSELEAAIAKEKAPVICLDEGGKQLSSMELADILYKRLEEGGARLSLVIGGAEGLPPRLRASKE----LWSLSRLTFTHQWARVLLAEQIYRASEIKRGSGYHKE 213
BLAST of mRNA_P-littoralis_Contig6.212.2 vs. uniprot
Match: A0A835ZC53_9STRA (Alpha/beta knot methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC53_9STRA) HSP 1 Score: 173 bits (439), Expect = 4.170e-51 Identity = 85/149 (57.05%), Postives = 114/149 (76.51%), Query Frame = 1
Query: 172 TCGLQITVRIRGKKSREQDYTNQAYDEYVKRLRPVLALDTQWHKTDEDLEAAVRKDTGVVVCLDEGGRQMNSQAFSEFVFSKLEEGGSRLTFVVGGAEGLPPGLKSKPPHGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHK 618
TCG ++T+ IRGK+ E+ + +DEYVKRLRP L L T WHKTD D+EAAV ++ V+C+DE G+Q++S +FSE+++ KLE GGSRL FV+GGAEGLP +K++ + K+SLS M TH WA ALL+EQIYRA+EIR+G+KYHK
Sbjct: 27 TCGPRVTIHIRGKE--ERGFLADGHDEYVKRLRPTLQLTTVWHKTDSDMEAAVFREQCPVICMDERGKQLDSTSFSEYLYKKLEIGGSRLAFVIGGAEGLPASMKAEKSYD--KMSLSKMVLTHTWAWALLSEQIYRATEIRKGTKYHK 171
BLAST of mRNA_P-littoralis_Contig6.212.2 vs. uniprot
Match: A0A7S2UUR8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUR8_9STRA) HSP 1 Score: 169 bits (428), Expect = 3.440e-49 Identity = 84/150 (56.00%), Postives = 111/150 (74.00%), Query Frame = 1
Query: 169 LTCGLQITVRIRGKKSREQDYTNQAYDEYVKRLRPVLALDTQWHKTDEDLEAAVRKDTGVVVCLDEGGRQMNSQAFSEFVFSKLEEGGSRLTFVVGGAEGLPPGLKSKPPHGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHK 618
+TCGL++T+ IRGKKS +D+ + DEY KRLR L L T+W+K D L V+K+ GV+V LDE G+ +NS+ FS+ ++ LE+GGSRL FV+GGAEGLPP LK++ H +SLS MTFTH AR +LAEQIYRA+EIR+G+ YHK
Sbjct: 45 MTCGLEVTIHIRGKKSGGEDWISTGIDEYQKRLRSTLKLQTKWYKDDSALIQGVKKEKGVIVTLDERGKLLNSKEFSQMMYKMLEDGGSRLHFVIGGAEGLPPSLKTEAKH---LISLSKMTFTHQQARLILAEQIYRATEIRKGTGYHK 191
BLAST of mRNA_P-littoralis_Contig6.212.2 vs. uniprot
Match: A0A7S2R9V3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R9V3_9STRA) HSP 1 Score: 140 bits (352), Expect = 1.620e-38 Identity = 75/126 (59.52%), Postives = 90/126 (71.43%), Query Frame = 1
Query: 244 YDEYVKRLRPV-LALDTQWHKTDEDLEAAVRKDTGVVVCLDEGGRQMNSQAFSEFVFSKLEEGGSRLTFVVGGAEGLPPGLKSKPPHGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHK 618
Y EY KRL+P + L T WH+TD+ L AAV V+CLD G Q +S+ FS+ +FSKLE+GGSRL FV+GGAEGLPP LK G +SLS +TFTH AR LLAEQ+YRA+EIRRGS YHK
Sbjct: 12 YAEYEKRLKPQQVELVTVWHRTDQQLLAAVEGSKAPVICLDPTGAQWSSERFSDMLFSKLEDGGSRLMFVIGGAEGLPPELK----RSGNLMSLSKLTFTHQMARMLLAEQVYRAAEIRRGSGYHK 133
BLAST of mRNA_P-littoralis_Contig6.212.2 vs. uniprot
Match: A0A7S2XIV0_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XIV0_9STRA) HSP 1 Score: 132 bits (332), Expect = 1.560e-34 Identity = 82/207 (39.61%), Postives = 127/207 (61.35%), Query Frame = 1
Query: 34 LMSTVMVSSFLHSSRSRIPPLL---VERRNWLSRSKSISSRSNYRRQE--LTCGLQITVRIRGKKSREQDYTNQAYDEYVKRLRPV-LALDTQWHKTDEDLEAAVRKDTG---VVVCLDEGGRQMNSQAFSEFVFSKLEEGGSRLTFVVGGAEGLPPGLKS---KPPHGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHK 618
L+S +++S +H+ + P + + +++RS++ + + RR L G+++ +RI G+K+ + + AY Y RLRP + ++T WHK D++L V+ D+ VV LD G+ S+ FSE +++ L++GGSRL+FV+GGAEGLP L+ P SLS++TFTH +AR LL EQIYRASEIR+GS YHK
Sbjct: 5 LISALLISCGIHAVEALSTPSFSRDLTQSRFVTRSRTSLTTNGVRRSRSSLCMGMEVRIRIVGRKNGSEKWLEDAYSMYETRLRPSNIDVETIWHKNDQELIKGVKGDSDKGHTVVLLDPRGKPRTSEQFSENMYTWLDQGGSRLSFVIGGAEGLPYELRDGSYNPKKSLILFSLSALTFTHQFARTLLMEQIYRASEIRKGSGYHK 211
BLAST of mRNA_P-littoralis_Contig6.212.2 vs. uniprot
Match: A0A7W1YWG3_9BACT (Ribosomal RNA large subunit methyltransferase H n=1 Tax=Parachlamydiaceae bacterium TaxID=2052176 RepID=A0A7W1YWG3_9BACT) HSP 1 Score: 126 bits (317), Expect = 3.480e-33 Identity = 69/144 (47.92%), Postives = 92/144 (63.89%), Query Frame = 1
Query: 187 ITVRIRGKKSREQDYTNQAYDEYVKRLRPVLALDTQWHKTDEDLEAAVRKDTGVVVCLDEGGRQMNSQAFSEFVFSKLEEGGSRLTFVVGGAEGLPPGLKSKPPHGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHK 618
I ++I ++++ A +EYVKRL P+ L QW K D+ L K+ +++CLD G ++S+ FS F+ KL+ GGSRLTF++GGA+GLP LKS P LSLS MTFTH R +L EQIYRA EI RGS+YHK
Sbjct: 2 IKIKIISVGKNKEEWLETALNEYVKRLTPIATLSFQWAKDDQHLLDIALKEP-LLICLDPQGSSLSSEEFSSFLHQKLQLGGSRLTFIIGGADGLPTTLKSSP-----LLSLSKMTFTHQITRLILVEQIYRAFEIARGSQYHK 139
BLAST of mRNA_P-littoralis_Contig6.212.2 vs. uniprot
Match: A0A7S2F628_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F628_9STRA) HSP 1 Score: 128 bits (321), Expect = 5.320e-33 Identity = 76/167 (45.51%), Postives = 111/167 (66.47%), Query Frame = 1
Query: 139 SSRSNYR--RQELTCGLQITVRIRGKKSREQDYTNQAYDEYVKRLRPV-LALDTQWHKTDEDLEAAVRKDTGV-VVCLDEGGRQMNSQAFSEFVFSKLEEGGSRLTFVVGGAEGLPPGLKSK--PPHGGAK-LSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHK 618
SS +N R RQ +T LQ+T+ I+G+K D+ A+++Y RL P + L T WHK+++ L A++ + +CLD G+Q++S F + ++ +L EGGSRL FV+GGAEGLP ++ K P + +SLSSMTFTH AR +LAEQ+YRA+EIR+G+ YHK
Sbjct: 38 SSDNNNRSGRQCITAALQVTLHIQGRKIN--DHNEVAFEQYAMRLTPHRIQLKTVWHKSNDQLTKAIKATSREPCICLDVCGQQLDSGGFEQLLYQRLVEGGSRLAFVIGGAEGLPDEVREKKDPKLQHVEFISLSSMTFTHQMARVILAEQVYRAAEIRKGTGYHK 202
BLAST of mRNA_P-littoralis_Contig6.212.2 vs. uniprot
Match: A0A7R9U173_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U173_9STRA) HSP 1 Score: 126 bits (317), Expect = 1.240e-32 Identity = 75/153 (49.02%), Postives = 102/153 (66.67%), Query Frame = 1
Query: 169 LTCGLQITVRIRG-KKSREQDYTNQAYDEYVKRLRPVLALDTQWHKTDEDLEAAVRKDTGVV--VCLDEGGRQMNSQAFSEFVFSKLEEGGSRLTFVVGGAEGLPPGLKSKPPHGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHK 618
L GLQ++++I G KK+ + ++AYD Y R R L L T+W K+D DL A+V +D + V L+ G+ ++S+ FSE ++ LEEGGSR+ FV+GGAEGLP L+ G LSL +T TH +AR LLAEQIYRAS+IR G+KYHK
Sbjct: 34 LRMGLQVSIKIVGTKKAGGLKWVSEAYDMYETRCRGQLELRTEWLKSDNDLVASVVRDRPKLLHVLLEVQGKSLSSEQFSEQMYKWLEEGGSRVCFVIGGAEGLPAALQGL---GLPSLSLGPLTLTHQFARVLLAEQIYRASQIRLGTKYHK 183 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig6.212.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig6.212.2 >prot_P-littoralis_Contig6.212.2 ID=prot_P-littoralis_Contig6.212.2|Name=mRNA_P-littoralis_Contig6.212.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=206bp MVFGVRRLLLMSTVMVSSFLHSSRSRIPPLLVERRNWLSRSKSISSRSNYback to top mRNA from alignment at P-littoralis_Contig6:844168..846183- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig6.212.2 ID=mRNA_P-littoralis_Contig6.212.2|Name=mRNA_P-littoralis_Contig6.212.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=2016bp|location=Sequence derived from alignment at P-littoralis_Contig6:844168..846183- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig6:844168..846183- >mRNA_P-littoralis_Contig6.212.2 ID=mRNA_P-littoralis_Contig6.212.2|Name=mRNA_P-littoralis_Contig6.212.2|organism=Pylaiella littoralis U1_48|type=CDS|length=618bp|location=Sequence derived from alignment at P-littoralis_Contig6:844168..846183- (Pylaiella littoralis U1_48)back to top |