prot_P-littoralis_Contig6.119.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig6.119.1
Unique Nameprot_P-littoralis_Contig6.119.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length508
Homology
BLAST of mRNA_P-littoralis_Contig6.119.1 vs. uniprot
Match: D8LL22_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL22_ECTSI)

HSP 1 Score: 523 bits (1348), Expect = 2.420e-180
Identity = 298/467 (63.81%), Postives = 341/467 (73.02%), Query Frame = 0
Query:   50 VDFPRWHPDQQRHRFNASGRIPATVTPLRRRRRRSFPSPNG---------AVAKAAVVLFVTVSSFCLVSPTVGLVIEEPFFATFDHVAAAFGPNVLSVEPPVESRPLVKARPRDGCSPLLTSMDNRAIALVERGSCNFTQKVLNAQDAGASAVIVSDTPTTEKWEMVMYGDKENAKGIEIPAVLVSHATGDRLWNNRSWIPGT-GRLRASLGAAGHIELDTRRAGAVEMVGIYLLLSVLLMAFSGVCGLLFALALTWWVYQRGYRARAMRKLKCFTFRRKYPPPSGTPVDANQITDSSRSDDRRSSETKAGRGGSAAVAVTVVDQHARPSSCNTGGTASAGPPSQRRGHPDKSSSSGNGDMRAEDDDLCAICLETFEDGESLTGLPCRHSFHAECIRPWLSGKSALCPMCKADAFGKGGLLSAAAPRLEAAFAELAALCTENLAVLGLFFLASVACGVIAAQLSLH 506
            ++ P    D+ +H    +GR P         R  + P+  G         A A AA VL  T+ S CL    +GLVIEEPF ATFDHVAAAFGP+VLS EPPVESRPLV+A+PRDGC PL  +MD  AIALVERG+CNFTQKVL+AQ AGASAV+V+DTP T+KW MVMYGD EN +GI+IPAVLVSHATG+RLW+NRSW+PG  GRLRAS+GAAGHI +  R  GA+EM+GIYLLLSVLL+AFSGVCGL+FAL  TW  YQRGYR RAMRKLK FTFRR+ PPP          T  ++SD   +S + +GR      A   VD     +S    GT SA          D SSS+ NG MR EDDDLCAICLET+EDG+SLTGLPCRHSFH +CIRPWLSGKSALCPMCK++AFGKGGL  A APRLEAAFAELAALCTENLAVLGLFFLASVACGVIAA+LSL 
Sbjct:   36 IEEPASRRDKHQHGLGRAGRCPRWRHRPSGSRGATLPATGGGAVWFAWPTAGATAAAVLVTTLLS-CLCPAAIGLVIEEPFQATFDHVAAAFGPDVLSAEPPVESRPLVRAKPRDGCVPLHNAMDEGAIALVERGTCNFTQKVLHAQLAGASAVVVTDTPATDKWLMVMYGDPENTQGIDIPAVLVSHATGERLWSNRSWLPGRQGRLRASVGAAGHIVMAARPVGALEMLGIYLLLSVLLLAFSGVCGLVFALGFTW--YQRGYRTRAMRKLKSFTFRRRPPPP----------TLGNQSDPAGTSSSNSGR------ASGTVDATTGQASSLGNGTGSAA-------SEDNSSSNDNGFMRREDDDLCAICLETYEDGDSLTGLPCRHSFHTQCIRPWLSGKSALCPMCKSEAFGKGGLFLATAPRLEAAFAELAALCTENLAVLGLFFLASVACGVIAAKLSLR 476          
BLAST of mRNA_P-littoralis_Contig6.119.1 vs. uniprot
Match: A0A4D9CZZ7_9STRA (RING-type domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZZ7_9STRA)

HSP 1 Score: 178 bits (451), Expect = 4.380e-46
Identity = 134/403 (33.25%), Postives = 198/403 (49.13%), Query Frame = 0
Query:  115 LVIEEPFFATFDHVAAAFGPNVLSVEPPVESRPLVKARPRDGCSPL-------------------LTSMDNRA-IALVERGSCNFTQKVLNAQDAGASAVIVSDTPTTEKWEMVMYGDKENAKGIEIPAVLVSHATGDRLWN---------NRSWIPGTGRLRASLGAAGHIELDTRRAGAVEMVGIYLLLSVLLMAFSGVCGLLFALALTWWVYQRGYRARAMRKLKCFTFRRKY----------PPPSGTPVDANQITDSSRSDDRRSSETKAG-RG--GSAAVAVTVVDQHAR-----PSSCNTGGTASAGPPSQRRGHPDKSSSSGNGDM---------------RAEDDDLCAICLETFEDGESLTGLPCRHSFHAECIRPWLSGKSALCPMCKADAF 455
            LV+++P  +   HV AAFGPN+L +E P+ +R LV   P D CS L                   L++   R  IAL++R  CNFT+KV  AQ A A+ VIV D+   E+W  +M G +E    I IP+V VSH+TG  L N         +     G  R+R +L   GH+   T++ G +E +  Y+++S++L++FSG CGLL AL +T   YQR +R RA+R LK   ++RK               G+    +     SR+      + + G RG  G  ++   +  Q +R     P+  +     ++G   + RG       +G+G+                  E+   CAICL+ +EDG+ L  LPC+H +H +CI PWL  KS  CPMCK   F
Sbjct:   23 LVVDQPCCSKHLHVPAAFGPNILGLESPLHARQLVMVEPEDACSDLFPRRASYQDSFFSSSSPSSLSAPSLRGKIALIKRNGCNFTEKVWRAQQAEAAGVIVYDSAARERWGTIMSGVEEWTSRITIPSVFVSHSTGLSLRNAVAQSERQSSGPGFEGAARVRVTLNDTGHVRAKTKQIGPIETLATYVVVSLVLLSFSGCCGLLLALCVT--CYQRAFRHRALRGLKVEKYQRKKVSQQPLLTYNSKDKGSNASTSPSAPLSRASPTSLPDRRKGLRGLWGLLSLRRVMDKQRSRIPLPLPAHPHLESLPASGL-GKGRGGRFPCPLTGDGEAPTAGEVVGASKDSWSEEEEQTTCAICLDEYEDGDLLRFLPCQHRYHDKCILPWLLEKSEACPMCKRPCF 422          
BLAST of mRNA_P-littoralis_Contig6.119.1 vs. uniprot
Match: W7TBK1_9STRA (Protease-associated RING/U-box zinc finger-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TBK1_9STRA)

HSP 1 Score: 171 bits (434), Expect = 2.690e-43
Identity = 136/396 (34.34%), Postives = 186/396 (46.97%), Query Frame = 0
Query:  130 AAFGPNVLSVEPPVESRPLVKARPRDGCSPLLT---------------------SMDNRAIALVERGSCNFTQKVLNAQDAGASAVIVSDTPTTEKWEMVMYGDKENAKGIEIPAVLVSHATGDRLWN---------NRSWIPGTGRLRASLGAAGHIELDTRRAGAVEMVGIYLLLSVLLMAFSGVCGLLFALALTWWVYQRGYRARAMRKLKCFTFRRKYPPPSGTPVDANQITDSSRSDDR-------RSSET------KAGRG--GSAAVAVTVVDQ----------HARPSSCNTGGTASAGPPSQRRGHPDKSSSSGNGDM---------------RAEDDDLCAICLETFEDGESLTGLPCRHSFHAECIRPWLSGKSALCPMCKADAF 455
            AAFGPN+L +E P+ +R LV   P D CS L                       S+  R IAL++R  CNFT+KV  AQ A A+ VIV D+   E+W  +M G +E    I IP+V VSH+TG  L N         +     G  R+R +L   GH+   T++ G +E +  Y+++S++L++FSG CGLL AL +T   YQR +R RA+R LK   ++RK    S  P+ A    D   S          R+S T      K  RG  G  ++   +  Q          H R  S    G   A      RG       +G+G+                  E+   CAICL+ +EDG+ L  LPC+H +H +CI PWL  KS  CPMCK   F
Sbjct:   10 AAFGPNILGLESPLHARELVMVEPEDACSDLFPRRASYQDSFFSSSSPSSLSAPSLRGR-IALIKRNGCNFTEKVWRAQQAEAAGVIVYDSAARERWGTIMSGVEEWTSRITIPSVFVSHSTGLSLRNAVAQSERQSSGPGFEGAARVRVTLNDTGHVRAKTKQIGPIETLATYVVVSLVLLSFSGCCGLLLALCVT--CYQRAFRHRALRGLKVEKYQRKKV--SQQPLLAYNSKDKGSSASTSPSALLSRASPTSLPDRRKGLRGLWGLLSLRRVINKQRSRIPLPLPAHPRLESVPASGLGKA------RGGRSPCPLTGDGEAPTACEGVGASKDSWSEEEEQTTCAICLDEYEDGDLLRFLPCQHRYHDKCILPWLLEKSEACPMCKRPCF 394          
BLAST of mRNA_P-littoralis_Contig6.119.1 vs. uniprot
Match: A0A7S2RLQ5_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RLQ5_9STRA)

HSP 1 Score: 122 bits (305), Expect = 5.400e-26
Identity = 115/383 (30.03%), Postives = 158/383 (41.25%), Query Frame = 0
Query:  114 GLVIE-EPFFAT--FDHVAAAFGPNVLSVEPPVESRPLVKARPRDGCS---------PLLTS---MDNRAIALVERGSCNFTQKVLNAQDAGASAVIV-SDTPTTEKWEMVMYGDKENAKGIEIPAVLVSHATGDRLWNNRSWIPGTG-------RL---------------RASLGAAGHIELDTRRAGAVEMVGIYLLLSVLLMAFSGVCGLLFALALTWWVYQRGYRARAMRKLKCFTFRRKYPPPSGTPVDANQITDSSRSDDRRSSETKAGRGGSAAVAVTVVDQHARPSSCNTGGTASAGPPSQRRGHPDKSSSSGNGDMRAEDDDLCAICLETFEDGESLTGLPCRHSFHAECIRPWLSGKSALCPMCKADAFGKG 458
            GLV+E  P  A   F HV AAFG     +   V +  LV A P+ GC          P   S   +++    L++RG CNFT KV+ AQ  GA+A I+  D P  ++WE+ M    +    + IP++ VS+ TG RLW   + I GTG       RL               R S+ A G++ +  +    +E   IY+++S+ L+  S    L  AL L W  Y +  R RA+  L  F    KY P +     A   T  S S     SE ++                  P  C                                 D  C+ICL+ +  GE+L  LPC H FH  CI PWL  +S  CP+CK  A   G
Sbjct:   60 GLVLELSPGAAVEQFSHVPAAFG-----LHHDVTNLRLVPAEPKHGCECASGECLGRPAPVSPFGLEDGFALLIQRGQCNFTDKVIWAQHRGAAAAIICDDQPRDDRWEVTMSSQDQTPVPVSIPSIFVSYRTGQRLWQ-AAQIHGTGGGMTQRWRLLLSGVGFTAAGMRFPRVSVNATGNVMVSMQLVRPLETFIIYVVVSLALLTLSACLWLSLALGLAW--YTQLQRRRALMALHRF----KYDPSTTVAPPATPYTSPSASSH---SEKRS------------------PVLCR--------------------------------DTTCSICLDDYASGETLRALPCGHVFHDRCITPWLERRSVDCPLCKQPALPAG 377          
BLAST of mRNA_P-littoralis_Contig6.119.1 vs. uniprot
Match: A0A1V9Y6L8_9STRA (PA domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y6L8_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 1.560e-15
Identity = 53/123 (43.09%), Postives = 67/123 (54.47%), Query Frame = 0
Query:  115 LVIEEPFFATFDHVAAAFGPNVLSVEPPVESRPLVKARPRDGCSPLLTSMDNRAIALVERGSCNFTQKVLNAQDAGASAVIVSDT---PTTEKWEMVMYGDKENAKGIEIPAVLVSHATGDRL 234
            LVIE P  A   H+ A FG  V + +       +  A P   C+PL   +  + IALV+RG CNF+ KVLNAQ A A AVIV D       E W + M  D  N+  + IP+V VSH +GDRL
Sbjct:   18 LVIERPCCAKLRHIHARFGRRVTNSDEYTRLE-VATAVPIQSCAPLRNDLHGK-IALVKRGGCNFSYKVLNAQRAHAKAVIVYDDYPRQRNESWAIRMVPDHTNSSSVFIPSVFVSHESGDRL 138          
BLAST of mRNA_P-littoralis_Contig6.119.1 vs. uniprot
Match: A0A024UE84_9STRA (PA domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UE84_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 8.530e-14
Identity = 53/122 (43.44%), Postives = 65/122 (53.28%), Query Frame = 0
Query:  115 LVIEEPFFATFDHVAAAFGPNVLSVEPPVESRPLVKARPRDGCSPLLTSMDNRAIALVERGSCNFTQKVLNAQDAGASAVIVSDTP--TTEKWEMVMYGDKENAKGIEIPAVLVSHATGDRL 234
            LVIE P      HV A FG N    +  V    LV  RP D CS +   +  + +AL+ RG+CNF  KVL AQ AGA AV+V D+       W + M GD  NA  + IP+V VS A G RL
Sbjct:   24 LVIERPCCHVERHVPARFG-NFYPKD--VNKLELVAVRPFDACSRIRNDIAGK-VALMARGNCNFAHKVLQAQVAGAKAVVVMDSEHRVNTSWVVTMIGDAGNATQVVIPSVFVSRAIGLRL 141          
BLAST of mRNA_P-littoralis_Contig6.119.1 vs. uniprot
Match: W4GRN5_9STRA (PA domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GRN5_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 1.750e-13
Identity = 53/133 (39.85%), Postives = 67/133 (50.38%), Query Frame = 0
Query:  108 LVSPTVGLVIEEPFFATFDHVAAAFG----PNVLSVEPPVESRPLVKARPRDGCSPLLTSMDNRAIALVERGSCNFTQKVLNAQDAGASAVIVSDTP--TTEKWEMVMYGDKENAKGIEIPAVLVSHATGDRL 234
            +V P   LVI+ P      HV A FG     +V+ +E       LV  RP D C  +   +  + +AL+ RG CNF  KVL AQ AGA AV+V D        W + M GD  NA  + IP+V VS A G RL
Sbjct:   18 IVLPLNALVIDRPCCNVERHVPARFGHLYPKDVVQLE-------LVVVRPFDACGLIRNDLSGK-VALMVRGDCNFAHKVLQAQTAGAKAVVVMDNEHRMNNSWVVTMVGDPGNASQVVIPSVFVSRAIGLRL 142          
BLAST of mRNA_P-littoralis_Contig6.119.1 vs. uniprot
Match: A0A3M7LWG7_9PLEO (RING-8 n=1 Tax=Pyrenophora seminiperda CCB06 TaxID=1302712 RepID=A0A3M7LWG7_9PLEO)

HSP 1 Score: 79.0 bits (193), Expect = 4.700e-12
Identity = 31/54 (57.41%), Postives = 40/54 (74.07%), Query Frame = 0
Query:  400 DMRAEDDDLCAICLETFEDGESLTGLPCRHSFHAECIRPWLSGKSALCPMCKAD 453
            DM AE  D CAIC++T ED + + GL C H+FHA C+ PWL+G+ A CP+CKAD
Sbjct:  249 DMLAEPGDTCAICIDTLEDDDDIRGLACGHAFHASCVDPWLTGRRACCPLCKAD 302          
BLAST of mRNA_P-littoralis_Contig6.119.1 vs. uniprot
Match: B2WPN9_PYRTR (RING-8 protein n=2 Tax=Pyrenophora tritici-repentis TaxID=45151 RepID=B2WPN9_PYRTR)

HSP 1 Score: 77.8 bits (190), Expect = 1.110e-11
Identity = 31/54 (57.41%), Postives = 40/54 (74.07%), Query Frame = 0
Query:  400 DMRAEDDDLCAICLETFEDGESLTGLPCRHSFHAECIRPWLSGKSALCPMCKAD 453
            +M AE  D CAICL+T ED + + GL C H+FHA C+ PWL+G+ A CP+CKAD
Sbjct:  243 EMLAEPGDTCAICLDTLEDDDDVRGLTCGHAFHASCVDPWLTGRRACCPLCKAD 296          
BLAST of mRNA_P-littoralis_Contig6.119.1 vs. uniprot
Match: A0A7C8IFG3_9PLEO (RING-type domain-containing protein n=1 Tax=Massariosphaeria phaeospora TaxID=100035 RepID=A0A7C8IFG3_9PLEO)

HSP 1 Score: 77.8 bits (190), Expect = 1.190e-11
Identity = 31/54 (57.41%), Postives = 40/54 (74.07%), Query Frame = 0
Query:  400 DMRAEDDDLCAICLETFEDGESLTGLPCRHSFHAECIRPWLSGKSALCPMCKAD 453
            ++ AE  D CAICL+T ED E + GL C H+FHA C+ PWL+G+ A CP+CKAD
Sbjct:  249 ELLAEPGDTCAICLDTLEDDEDVRGLTCGHAFHASCVDPWLTGRRACCPLCKAD 302          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig6.119.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LL22_ECTSI2.420e-18063.81RING-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A4D9CZZ7_9STRA4.380e-4633.25RING-type domain-containing protein n=1 Tax=Nannoc... [more]
W7TBK1_9STRA2.690e-4334.34Protease-associated RING/U-box zinc finger-contain... [more]
A0A7S2RLQ5_9STRA5.400e-2630.03Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A1V9Y6L8_9STRA1.560e-1543.09PA domain-containing protein n=1 Tax=Thraustotheca... [more]
A0A024UE84_9STRA8.530e-1443.44PA domain-containing protein n=1 Tax=Aphanomyces i... [more]
W4GRN5_9STRA1.750e-1339.85PA domain-containing protein n=4 Tax=Aphanomyces a... [more]
A0A3M7LWG7_9PLEO4.700e-1257.41RING-8 n=1 Tax=Pyrenophora seminiperda CCB06 TaxID... [more]
B2WPN9_PYRTR1.110e-1157.41RING-8 protein n=2 Tax=Pyrenophora tritici-repenti... [more]
A0A7C8IFG3_9PLEO1.190e-1157.41RING-type domain-containing protein n=1 Tax=Massar... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 409..450
e-value: 3.1E-8
score: 43.4
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 408..451
e-value: 1.1E-12
score: 48.0
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 409..451
score: 13.049892
IPR003137PA domainPFAMPF02225PAcoord: 147..234
e-value: 2.3E-12
score: 46.8
NoneNo IPR availableGENE3D3.50.30.30coord: 112..240
e-value: 3.6E-24
score: 87.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 325..351
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 371..400
NoneNo IPR availablePANTHERPTHR22765:SF334RECEPTOR HOMOLOGY REGION, TRANSMEMBRANE DOMAIN- AND RING DOMAIN-CONTAINING PROTEIN 1coord: 98..234
coord: 394..453
NoneNo IPR availablePANTHERPTHR22765RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAININGcoord: 98..234
NoneNo IPR availablePANTHERPTHR22765RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAININGcoord: 394..453
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..29
score: 5.0
NoneNo IPR availableCDDcd16454RING-H2_PA-TM-RINGcoord: 409..451
e-value: 2.31482E-18
score: 76.5717
NoneNo IPR availableSUPERFAMILY52025PA domaincoord: 168..244
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 402..454
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 391..456
e-value: 6.4E-19
score: 69.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig6contigP-littoralis_Contig6:447983..457738 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig6.119.1mRNA_P-littoralis_Contig6.119.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig6 446537..457848 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig6.119.1 ID=prot_P-littoralis_Contig6.119.1|Name=mRNA_P-littoralis_Contig6.119.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=508bp
MDFPDFRPSVLLGSRQRTTAHGSTGGSSCCCTKIIRNKELTSACNPNNDV
DFPRWHPDQQRHRFNASGRIPATVTPLRRRRRRSFPSPNGAVAKAAVVLF
VTVSSFCLVSPTVGLVIEEPFFATFDHVAAAFGPNVLSVEPPVESRPLVK
ARPRDGCSPLLTSMDNRAIALVERGSCNFTQKVLNAQDAGASAVIVSDTP
TTEKWEMVMYGDKENAKGIEIPAVLVSHATGDRLWNNRSWIPGTGRLRAS
LGAAGHIELDTRRAGAVEMVGIYLLLSVLLMAFSGVCGLLFALALTWWVY
QRGYRARAMRKLKCFTFRRKYPPPSGTPVDANQITDSSRSDDRRSSETKA
GRGGSAAVAVTVVDQHARPSSCNTGGTASAGPPSQRRGHPDKSSSSGNGD
MRAEDDDLCAICLETFEDGESLTGLPCRHSFHAECIRPWLSGKSALCPMC
KADAFGKGGLLSAAAPRLEAAFAELAALCTENLAVLGLFFLASVACGVIA
AQLSLHG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR003137PA_domain
IPR013083Znf_RING/FYVE/PHD