prot_P-littoralis_Contig6.34.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig6.34.1
Unique Nameprot_P-littoralis_Contig6.34.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length468
Homology
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BLAST of mRNA_P-littoralis_Contig6.34.1 vs. uniprot
Match: D7FU27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU27_ECTSI)

HSP 1 Score: 138 bits (348), Expect = 2.250e-31
Identity = 121/265 (45.66%), Postives = 141/265 (53.21%), Query Frame = 0 
Query:  163 GHRRERSSGDDGRCRSSYSRFSFEEADEAAKE---NAKGARNSQEEERRMSPPWDDSTLGLLGLSPDELVDRVLRAEKSSHFWKAQLKLVERKLAVLETTTATTMTCSQREGIGSGGNGTASVPPVVDDTPAEQNGSVDAASRAGWDDRQGATENXXXXXXXXXXXXXXXXXXTTGDDFSNSRGLLASPQDGVAYFRSTFRGGIGRSGXXXXXXXXXXSAEDGWKERSPGVGPWPLSEQTREGRASLNEKQGVSN-GGGGSIGAT 423
            GH   R+ GD     SS+ RFS EEADE A +     K +  +Q  ERRMSPPWDDS LGL GL+PDELV RVL+AEK S  W+AQ  LV+RKL    T   T MT   R   G GG    S   +  D    ++  ++ AS A         +           XXXXXXXX    +  +S+  LAS QD VA                  XXXX  S ED WKER PGVGPWPL EQTREGRASL++K  VSN G  GS G T
Sbjct:  534 GHDSARTGGDRSGSVSSH-RFSIEEADEEAGKAGGTMKASSENQNSERRMSPPWDDSMLGLRGLTPDELVARVLQAEKESRHWQAQHALVDRKL----TNLLTAMTKHSRRPGGDGGRSVYSGGSLNADRGDGEDDRIEGASLAAGTRDVAGRDGVKVRYGSFGGXXXXXXXXXXXXELPDSKRSLASHQDDVAXXXXXXX-----------XXXXSGSVEDAWKERPPGVGPWPLFEQTREGRASLDDKLRVSNRGSAGSGGGT 782
[Close]
BLAST of mRNA_P-littoralis_Contig6.34.1 vs. uniprot
Match: A0A6H5KRU7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRU7_9PHAE)

HSP 1 Score: 91.7 bits (226), Expect = 7.550e-16
Identity = 85/211 (40.28%), Postives = 103/211 (48.82%), Query Frame = 0 
Query:  104 DRDSCPCLLPPSGAASSIAKANGMDSVERSARCSGGDXXXXXXXXXSAGAFFSRPPAVIG--HRRERSSGDDGRCRSSYSRFSFEEADEAAKE---NAKGARNSQEEERRMSPPWDDSTLGLLGLSPDELVDRVLRAEKSSHFWKAQLKLVERKLAVLETTTATTMTC-SQREG------IGSGG--NGTASVPPVVDDTPAEQNGSVDAA 300
            D D  P   P SGAAS  A+ + +  V  S+   G              A  +      G  H   R+ G+     SSY R S EEADE  ++     K +  +Q  ERRMSPPWDDS LGL GL+PDELV RVL+AEK S  W+AQ  LV+RKL  L     T MT  S+R G      + SGG  NG  +  P  D T   Q  S  AA
Sbjct:   99 DGDFGPPTFPSSGAASLTAEEDVVCGVGNSSTPFGNGSGSTAQAVGGNLALHNLGELATGRGHDSARTGGEPSGSVSSY-RLSIEEADEEVEKAGGTMKASSENQNSERRMSPPWDDSMLGLRGLTPDELVARVLQAEKESRHWQAQHALVDRKLTDL----LTAMTKHSRRPGGDGDCNVHSGGSLNGETACVPPEDATTTGQGSSALAA 304
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig6.34.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FU27_ECTSI2.250e-3145.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KRU7_9PHAE7.550e-1640.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..70
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..68
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 365..467
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 161..212
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 405..426
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 266..344
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 95..114
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 119..216

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig6contigP-littoralis_Contig6:138014..141759 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig6.34.1mRNA_P-littoralis_Contig6.34.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig6 137731..145163 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig6.34.1 ID=prot_P-littoralis_Contig6.34.1|Name=mRNA_P-littoralis_Contig6.34.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=468bp
MLVPSFSWRSSQPGSAAAAAEVAVADGSAPAPAVQAPSAPPVPSSEVSLA
TSNSSNLHSASSSFSGGAEEAETAAAAAAAAVAAVAAVAAAATGSAGLPS
VRNDRDSCPCLLPPSGAASSIAKANGMDSVERSARCSGGDGGDGGDGGGS
AGAFFSRPPAVIGHRRERSSGDDGRCRSSYSRFSFEEADEAAKENAKGAR
NSQEEERRMSPPWDDSTLGLLGLSPDELVDRVLRAEKSSHFWKAQLKLVE
RKLAVLETTTATTMTCSQREGIGSGGNGTASVPPVVDDTPAEQNGSVDAA
SRAGWDDRQGATENNRRSGGGGGSCDGGGGGRTTGDDFSNSRGLLASPQD
GVAYFRSTFRGGIGRSGSSGSSGGDGGSAEDGWKERSPGVGPWPLSEQTR
EGRASLNEKQGVSNGGGGSIGATSVDGKLSTRGIEENETKTNAKRTAAAA
AAAEGTSAPYRLRGSGP*
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