mRNA_P-littoralis_Contig1152.19.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-littoralis_Contig1152.19.2
Unique Name	mRNA_P-littoralis_Contig1152.19.2
Type	mRNA
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))

Homology

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BLAST of mRNA_P-littoralis_Contig1152.19.2 vs. uniprot
Match: A0A6H5JR14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR14_9PHAE)

HSP 1 Score: 335 bits (860), Expect = 7.700e-106
Identity = 163/254 (64.17%), Postives = 195/254 (76.77%), Query Frame = 1

Query:  286 EKSFAEFPVAFRHPVHGGPIFNMSDPPHILKKIANACWHSDLAGKQRALAMWCTDEHGNEKLVRFSLKTGERAYRLVENDGDSLSTEERVASISTFRNLKPGCFNRNSWNCMNVGMSSKLLSGTMVRIIDKVQFDRVTMGESPDLELECSAALASRVDAFIDIFNG-----------------------NFGRSEYARKKSLDKKAGYITSADDSKLEELMDILRFSEKWRCNLEEKTTLGDVTWKKHFITEYS 978
            +++   FPVAF HPVH GPIFNMSDPPHILKKIAN CWHSD   K+R LAMWC DE GN  LVRFSL T ER Y  VENDG++LS EE+VASI+TFR + P CFNRNSWNCMNV  S+K+LSGT+V +I+KVQ D +TMG+  DLEL+C AALA+++DAFIDIFNG                       NFGRSEYAR+  LDK+AGYI+SADDSKLEEL++++RF +KWR +L+EKTT+GD TWKKHFITE+S
Sbjct:  362 QRNSVSFPVAFPHPVHLGPIFNMSDPPHILKKIANTCWHSDQDSKKRELAMWCGDEEGNTDLVRFSLATAERVYNQVENDGNTLSQEEKVASITTFRKVVPSCFNRNSWNCMNVSYSAKVLSGTIVCMIEKVQRDLLTMGKPLDLELDCYAALAAKMDAFIDIFNGKLYIIFVLAYCLVFLKQQMWWSGNFGRSEYARRNGLDKEAGYISSADDSKLEELINMVRFFDKWRSSLQEKTTMGDETWKKHFITEFS 615

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BLAST of mRNA_P-littoralis_Contig1152.19.2 vs. uniprot
Match: D7FZI2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI2_ECTSI)

HSP 1 Score: 319 bits (817), Expect = 1.910e-97
Identity = 171/394 (43.40%), Postives = 225/394 (57.11%), Query Frame = 1

Query:    1 RYGDLAAVQDADAAELMGSLAFDCVHLNKNGLSYAPNGAGLTGLVDDTTFFNPIFAENGEEEPDLEKTLGKIIATQHVEL-----------------------------------------------------------------RAGTFKFGAFSQGDAEKSFAEFPVAFRHPVHGGPIFNMSDPPHILKKIANACWHSDLAGKQRALAMWCTDEHGNEKLVRFSLKTGERAYRLVENDGDSLSTEERVASISTFRNLKPGCFNRNSWNCMNVGMSSKLLSGTMVRIIDKVQFDRVTMGESPDLELECSAALASRVDAFIDIFNGNFGRSEYARKKSLDKKAGYITSADDSKLEELMDILRFSEKWRCNLEE---KTTLGDVTWKKHFITEYS 978
            +YG LAA QDAD  +LMG L +D +HLNKNG S+APNG G TGLVD+TTFFNPI+   G    ++E  L KI+ATQ+VE+                                                                  A    F  + +G  E SFA F V F HPVH   +FNMSDP HILKKI NA WHSD+  KQR L MWC  +    K  +FSLKT +R Y  VE D DS++ EER A+++ F  +  G FNR ++ CMNV +S+K++SGT+VR I +V+ ++ T GESPDL L C   LA  ++ F+DIFNG++GR+++ R+  ++K  GY+TSA+D  LE LM+ILR+ + W   L+E    T  GDV WKKHFIT +S
Sbjct:  518 KYGKLAATQDADKVDLMGVLTWDLMHLNKNGFSFAPNGGGFTGLVDETTFFNPIYKHEGGVVKEVEPILEKIVATQYVEMFFVSIGKPEYKFVVWREAVRSLSTDYIQRMLIRAMRYLAMAHPDKAFDVIATECDGAPEHRSFQTHAAILGFCHWIKGPKEGSFAGFKVGFLHPVHLHEVFNMSDPMHILKKIVNALWHSDIPAKQRQLGMWCVTDQDELKFSQFSLKTAQRVYNDVEYDNDSMTPEERAATLTIFPGMPVGAFNRTNFTCMNVKLSAKVVSGTIVRAIREVRANQETRGESPDLALGCYEGLAVHLNDFVDIFNGDYGRTKFERRAKINKMKGYVTSAEDPILERLMEILRYFDDWNDMLQEFPPPTGGGDVGWKKHFITRHS 911

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BLAST of mRNA_P-littoralis_Contig1152.19.2 vs. uniprot
Match: A0A6H5KVF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF4_9PHAE)

HSP 1 Score: 258 bits (658), Expect = 4.530e-75
Identity = 142/337 (42.14%), Postives = 182/337 (54.01%), Query Frame = 1

Query:    1 RYGDLAAVQDADAAELMGSLAFDCVHLNKNGLSYAPNGAGLTGLVDDTTFFNPIFAENGEEEPDLEKTLGKIIATQHVEL-----------------------------------------------------------------RAGTFKFGAFSQGDAEKSFAEFPVAFRHPVHGGPIFNMSDPPHILKKIANACWHSDLAGKQRALAMWCTDEHGNEKLVRFSLKTGERAYRLVENDGDSLSTEERVASISTFRNLKPGCFNRNSWNCMNVGMSSKLLSGTMVRIIDKVQFDRVTMGESPDLELECSAALASRVDAFIDIFNGNFGRSEYARKK 816
            +YG LAA QDAD  +LMG L +D +HLNKNG S+APNG G TGLVD+T FFNPI+   G    ++E TL KI+ATQ+VE+                                                                  A    F  + +G  E SFA F V F HPVH   +FNMSDP HILKKI NA WHSD+  KQR L MWC  +    K  +FSLKT +R Y  VE D DS++ EER A+++ F  +  G FNR ++ CMNV +S+K++SGT+VR I +V+ ++ T GESPDL L C   LA  ++ F+DIFNG       ARK+
Sbjct:  609 KYGKLAATQDADKVDLMGVLTWDLMHLNKNGFSFAPNGGGFTGLVDETAFFNPIYKHEGGVVKEVEPTLEKIVATQYVEMFFVSIGKPEYKFVVWREAVRSLSTDYIQRMLIRVMRYLAMAHPDKAFDVVATICDGAPEHRSFQTHAAILGFCHWIKGPKEGSFAGFKVGFLHPVHLHEVFNMSDPMHILKKIVNALWHSDIPAKQRQLGMWCVTDQDELKFSQFSLKTAQRVYNDVEYDNDSMTPEERPATLTIFPGMPVGAFNRTNFTCMNVKLSAKVVSGTIVRAIREVRANQETRGESPDLALGCYEGLAVHLNDFVDIFNGEETTRGLARKR 945

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BLAST of mRNA_P-littoralis_Contig1152.19.2 vs. uniprot
Match: A0A6H5L5M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5M0_9PHAE)

HSP 1 Score: 222 bits (565), Expect = 6.410e-63
Identity = 133/368 (36.14%), Postives = 172/368 (46.74%), Query Frame = 1

Query:    1 RYGDLAAVQDADAAELMGSLAFDCVHLNKNGLSYAPNGAGLTGLVDDTTFFNPIFAENGEEEPDLEKTLGKIIATQHVEL---------------------------------------------------------------------------------------------------------RAGTFKFGAFSQGDAEKSFAEFPVAFRHPVHGGPIFNMSDPPHILKKIANACWHSDLAGKQRALAMWCTDEHGNEKLVRFSLKTGERAYRLVENDGDSLSTEERVASISTFRNLKPGCFNRNSWNCMNVGMSSKLLSGTMVRIIDKVQFDRVTMGESPDLELECSAALASRVDAFIDIFNGNF 789
            + G LAA QD D A+LMG LA+D +HLNKNG S+APNG G TGLVD+TTFFNPI+   G    ++E  L KI+ATQ+VE+                                                                                                          A    F  + +G  E SF  F V   HPVH   +FNMSDP HILKKI NA WHSD+  KQR L MWC  +    K  +FSLKT +R Y  VE D +S++ EER A+++ F  +    FNR ++ CMNV +S+K++SGT+VR I +V+ +R T GE PDL L C       ++ F+DIFN  F
Sbjct:  376 KNGKLAATQDTDKADLMGVLAWDLMHLNKNGFSFAPNGGGFTGLVDETTFFNPIYKHEGGIVKEVEPILEKIVATQYVEMYFVSVGKPEYKFVVWREAVRSLSTDFIQRMLIRVMRSLAMAHPDKAFDVIATVCDGAPGQLGEVTLVVAKWMTLERPCVEPYFMIGPFPLVAPSRTPLDSRSFQTHAAISGFCRWIKGPQEGSFTSFKVGILHPVHLHEVFNMSDPMHILKKIVNALWHSDIPAKQRQLGMWCVTDQDELKFSQFSLKTAQRVYNDVEYDNNSITPEERAATLTIFPGMPVSAFNRTNFTCMNVKLSAKVVSGTIVRAIREVRANRETRGEPPDLALGC---YEGHLNDFVDIFNAAF 740

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BLAST of mRNA_P-littoralis_Contig1152.19.2 vs. uniprot
Match: A0A6H5K7Z3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z3_9PHAE)

HSP 1 Score: 172 bits (437), Expect = 3.940e-45
Identity = 103/251 (41.04%), Postives = 142/251 (56.57%), Query Frame = 1

Query:  232 VELRAGTFKFGAFSQGDAEKSFAEFPVAFRHPVHGGPIFNMSDPPHILKKIANACWHSDLAGKQRALA--MWCTDEHGNEKLVRFSLKTGERAYRLVENDGDSLSTEERVASISTFRNLKPGCFNRNSWNCMNVGMSSKLLSGTMVRIIDKVQFDRVTMGESPDLELECSAALASRVDAFIDIFNGNFGRSEYARKKSLDKKAGYITSADDSKLEELMDILRFSEKWRCNLEEKTTLGDVTWKKHFITEYS 978
             +L   TF   A  +   E+ FA+FP+AF HP HG P+FNMS PPH+L  + NA W+S L  KQR L    W  D    E  V FSLKT E  +   E  G SLS  E  +++  F   +P   +RNS NCM+V +S+K +S T V +    Q +++    SP+ E+ C A LA  ++ F+DI NG +G +E  RK+  +K+ GYIT AD   L  L++IL F + W+ +LE     G   W  HFIT+YS
Sbjct:  295 TKLATSTFGEWADPKSRLEERFADFPMAFNHPHHGEPVFNMSGPPHLLX-VVNALWYSSLPSKQRHLKNLFWNRDTEEFE-WVSFSLKTLETVWVNEERGGGSLSAAEVASNLRRFLKFEPEMLDRNSHNCMSVRLSAKCVSRTAVYVCGCAQ-EKLA---SPNGEIACYAELAEVMNDFLDIMNGVYGLNEVERKQGGNKRKGYITGADSPLLGRLLEILEFFDSWQVSLEAH--FGPKEWANHFITDYS 537

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BLAST of mRNA_P-littoralis_Contig1152.19.2 vs. uniprot
Match: A0A6H5KFP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFP1_9PHAE)

HSP 1 Score: 172 bits (437), Expect = 1.460e-44
Identity = 103/297 (34.68%), Postives = 164/297 (55.22%), Query Frame = 1

Query:  109 NGAGLTGLVDDTTFFNPIFAENGEEEPDLEKTLGKII--ATQHVELRA--GTFKFGAFSQGDA--EKSFAEFPVAFRHPVHGGPIFNMSDPPHILKKIANACWHSDLAGKQRALA-MWCTDEHGNEKLVRFSLKTGERAYRLVENDGDSLSTEERVASISTFRNLKPGCFNRNSWNCMNVGMSSKLLSGTMVRIIDKVQFDRVTMGESPDLELECSAALASRVDAFIDIFNGNFGRSEYARKKSLDKKAGYITSADDSKLEELMDILRFSEKWRCNLEEKTTLGDVTWKKHFITEYS 978
            +G  ++ ++D+ T  N ++  + +++ D+   +G +   A +H   +    T  F  +++ D+  E+   ++PVAF+HP H GP+FNMSDP H+LKK+ NA W+S L  K+R L  +W        +L  FSLKT E+A+R  E    + +  ER A++  F  +   C +R+S  CM+V +S+K +S T + +I   Q   + + + P  EL C A +A  ++ F+DI NG F   E  R     KK GYIT AD   L  L+++L+F + W+ NL    T G   W  HFIT+ S
Sbjct:  468 SGPKISRMLDEIT--NKLYEAHEDKKFDV---IGTVCDGAAEHRSFQQHFATTTFSEWAKSDSVFEQRHKDYPVAFKHPHHDGPVFNMSDPVHLLKKVVNALWYSGLDSKERHLQNLWWNPLTDAPELASFSLKTLEKAWREEEGHRANRTAAERAATLRRFLKMDAACLDRDSHTCMSVKLSAKCVSKTAMHVIASAQGKLLALDKPPSGELACYADVAEVMNDFLDIMNGVFNVLEQDRAHPQRKKEGYITGADCPPLTRLLEVLQFFDSWQSNLRH--TFGG-KWAPHFITDVS 756

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BLAST of mRNA_P-littoralis_Contig1152.19.2 vs. uniprot
Match: A0A6H5JRH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRH8_9PHAE)

HSP 1 Score: 154 bits (388), Expect = 5.200e-38
Identity = 95/248 (38.31%), Postives = 121/248 (48.79%), Query Frame = 1

Query:  235 ELRAGTFKFGAFSQGDAEKSFAEFPVAFRHPVHGGPIFNMSDPPHILKKIANACWHSDLAGKQRALAMWCTDEHGNEKLVRFSLKTGERAYRLVENDGDSLSTEERVASISTFRNLKPGCFNRNSWNCMNVGMSSKLLSGTMVRIIDKVQFDRVTMGESPDLELECSAALASRVDAFIDIFNGNFGRSEYARKKSLDKKAGYITSADDSKLEELMDILRFSEKWRCNLEEKTTLGDVTWKKHFITEYS 978
            +LRA T +F AF+QGD E+SF+ FPVA RH VH GP+FN+SDPPH++KKIAN  WHSDL G                                + +DG             T+    P                         R +D+ +  R+ +GE     +E    L     A       NFGRS+YARK  LDK   YI SADDSKLEE+MDIL   ++WR +LE + TLGD  WK HFIT++S
Sbjct:  320 QLRAATVEFSAFAQGDDEESFSNFPVALRHSVHLGPMFNVSDPPHLVKKIANTLWHSDLTGA-------------------------------IRDDG-------------TYHRADPA------------------------RPLDRGKTPRLAIGELSGTRVE-DGRLRRHFQA------RNFGRSDYARKNGLDKMVSYIRSADDSKLEEVMDILLLFDEWRASLEARPTLGDGAWKAHFITDHS 492

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BLAST of mRNA_P-littoralis_Contig1152.19.2 vs. uniprot
Match: D8LK65_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK65_ECTSI)

HSP 1 Score: 123 bits (308), Expect = 2.140e-29
Identity = 61/131 (46.56%), Postives = 83/131 (63.36%), Query Frame = 1

Query:  259 FGAFSQGDA--EKSFAEFPVAFRHPVHGGPIFNMSDPPHILKKIANACWHSDLAGKQRALA-MWCTDEHGNEKLVRFSLKTGERAYRLVENDGDSLSTEERVASISTFRNLKPGCFNRNSWNCMNVGMSSK 642
            F  +++GD+  EK   +F VAF+HP HGGP+FNMSDP H+LKK+ NA WHSD+  KQR L  +W  +   + + V FSLKT E+ ++  E  G   S  E+ A +  F    P  F RNS NCM+VG+S+K
Sbjct:  131 FSEWARGDSAFEKRMGDFKVAFKHPSHGGPVFNMSDPVHLLKKVVNALWHSDIPSKQRDLKKLWYNEAAEDYEWVSFSLKTLEKVWKEEEAGGGVRSVAEQAAHLIRFLKFDPEMFTRNSHNCMSVGLSAK 261

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BLAST of mRNA_P-littoralis_Contig1152.19.2 vs. uniprot
Match: A0A6H5KYD6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYD6_9PHAE)

HSP 1 Score: 115 bits (287), Expect = 4.500e-28
Identity = 58/116 (50.00%), Postives = 74/116 (63.79%), Query Frame = 1

Query:  301 EFPVAFRHPVHGGPIFNMSDPPHILKKIANACWHSDLAGKQRAL-AMWCTDEHGNEKLVRFSLKTGERAYRLVENDGDSLSTEERVASISTFRNLKPGCFNRNSWNCMNVGMSSKL 645
            +F VAFRHP HG P+FNMS+P H+LKK+ NA WHS LA KQR L  +W   +   E+ V FSLKT E  +   E  G   S  E+ A +S FR + P  F RNS NCM+V +S+K+
Sbjct:    5 DFKVAFRHPQHGRPVFNMSEPVHLLKKVVNALWHSGLADKQRDLKGLWWDPKTEEEEWVSFSLKTLEEVWNQEEAGGGIRSGAEQAAHLSRFRKVNPEMFYRNSHNCMSVKLSAKV 120

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BLAST of mRNA_P-littoralis_Contig1152.19.2 vs. uniprot
Match: A0A6H5KH17_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH17_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 2.830e-21
Identity = 45/67 (67.16%), Postives = 54/67 (80.60%), Query Frame = 1

Query:  778 NGNFGRSEYARKKSLDKKAGYITSADDSKLEELMDILRFSEKWRCNLEEKTTLGDVTWKKHFITEYS 978
            +GNFGRS+YARK  LDK  GYI SADDSKLEELMDILRF ++WR +LE + TLG   WK +FIT++S
Sbjct:   23 DGNFGRSDYARKNGLDKMVGYIRSADDSKLEELMDILRFFDEWRASLEARPTLGGRAWKAYFITDHS 89

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig1152.19.2 vs. uniprot

BLAST of mRNA_P-littoralis_Contig1152.19.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 17


Match Name	E-value	Identity	Description
A0A6H5JR14_9PHAE	7.700e-106	64.17	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FZI2_ECTSI	1.910e-97	43.40	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KVF4_9PHAE	4.530e-75	42.14	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5L5M0_9PHAE	6.410e-63	36.14	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K7Z3_9PHAE	3.940e-45	41.04	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KFP1_9PHAE	1.460e-44	34.68	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JRH8_9PHAE	5.200e-38	38.31	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LK65_ECTSI	2.140e-29	46.56	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KYD6_9PHAE	4.500e-28	50.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KH17_9PHAE	2.830e-21	67.16	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig1152	contig	P-littoralis_Contig1152:52888..59917 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	0
Start	0
Model size	982
Hectar predicted targeting category	other localisation
Exons	4
Cds size	978

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680789474.9957035-CDS-P-littoralis_Contig1152:52889..53086	1680789474.9957035-CDS-P-littoralis_Contig1152:52889..53086	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig1152 52890..53086 -
1680789475.0063808-CDS-P-littoralis_Contig1152:58004..58143	1680789475.0063808-CDS-P-littoralis_Contig1152:58004..58143	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig1152 58005..58143 -
1680789475.0197697-CDS-P-littoralis_Contig1152:58458..58863	1680789475.0197697-CDS-P-littoralis_Contig1152:58458..58863	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig1152 58459..58863 -
1680789475.0337977-CDS-P-littoralis_Contig1152:59680..59917	1680789475.0337977-CDS-P-littoralis_Contig1152:59680..59917	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig1152 59681..59917 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig1152.19.2	prot_P-littoralis_Contig1152.19.2	Pylaiella littoralis U1_48	polypeptide	P-littoralis_Contig1152 52890..59917 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-littoralis_Contig1152:52888..59917-
coding sequence from alignment at P-littoralis_Contig1152:52888..59917-

protein sequence of mRNA_P-littoralis_Contig1152.19.2

>prot_P-littoralis_Contig1152.19.2 ID=prot_P-littoralis_Contig1152.19.2|Name=mRNA_P-littoralis_Contig1152.19.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=326bp
RYGDLAAVQDADAAELMGSLAFDCVHLNKNGLSYAPNGAGLTGLVDDTTF
FNPIFAENGEEEPDLEKTLGKIIATQHVELRAGTFKFGAFSQGDAEKSFA
EFPVAFRHPVHGGPIFNMSDPPHILKKIANACWHSDLAGKQRALAMWCTD
EHGNEKLVRFSLKTGERAYRLVENDGDSLSTEERVASISTFRNLKPGCFN
RNSWNCMNVGMSSKLLSGTMVRIIDKVQFDRVTMGESPDLELECSAALAS
RVDAFIDIFNGNFGRSEYARKKSLDKKAGYITSADDSKLEELMDILRFSE
KWRCNLEEKTTLGDVTWKKHFITEYS

mRNA from alignment at P-littoralis_Contig1152:52888..59917-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-littoralis_Contig1152.19.2 ID=mRNA_P-littoralis_Contig1152.19.2|Name=mRNA_P-littoralis_Contig1152.19.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=7030bp|location=Sequence derived from alignment at P-littoralis_Contig1152:52888..59917- (Pylaiella littoralis U1_48)
AGGTATGGGGACCTCGCCGCCGTGCAAGACGCGGATGCGGCCGAACTCAT
GGGTTCTTTGGCATTTGACTGTGTCCACCTCAACAAGAACGGGCTCAGCT
ACGCACCGAACGGAGCGGGGTTGACGGGCCTTGTGGACGACACCACGTTC
TTCAATCCAATCTTCGCGGAGAACGGGGAGGAGGAACCGGATTTGGAGAA
GACCCTGGGCAAGATCATCGCCACGCAACACGTTGAGGTGATGTTTGATT
TTGGGTAAGGGTTAGCGTGTGACCACGGCAACTGGCCGTGTACGTTGATC
AGTACGGACAAAGGGGGTGCTGGATGGAGATATCGGGTTAGGTTTTTAGT
GTGAAGACAACAATAACACAATTCAAACGTTGGTTTGAAGCTGTGGTGCG
TTATCGGCGTCGGCCAGCAAAGGCTCAGCATTGTATTCGTGTCGACAGAT
AAGTATCCTCATGTACCCCGTCATAAACCTCACATGGCAGAGTGACCATC
GAACGTAACCCCTCTACTACCTCGTTAACACGGTGGGTTCCCCCTCCTTC
CATCCCGGCGCGAAACATTAGATGTTCTTCATCAGTGAGGCCAACCCGGA
GTACAAGTTTGCCGTGTGGCGCGAATCCGTCGGGTCTCTCAACACGGACT
ACGTACAGCGAATGGTGATGACAGTTGCGCGCGCGCTGGCAACTGCGAAC
CAATTCAAGGGGTTCGACGTCGGGTGCTTGGTGTGCGATGGGGTGCAAGA
ACAGTGAGTCCACACAATGTTGGGTCAGCAGTTTGTGCTTCCTAGCACGT
ATCTGGCTGGGGTTGTTGTTTTGAGCGACCCCACCCGCATGCTGCACGCC
TCAGGATGGGCAACGGTCGCAGGTGGATTCTGCACAAAATCGGCTGAACG
GTGTGTGCGCGGGAGCTCCACCCCTCGCCCTCGGACCCCATCACCCTCCC
TTCCCACTTACACGTCCCCCTCTCCCTCCTTCCCTGTGCGCATTTACCAC
TTCTCGGCCGCTCTCCGTAATATATGCGCTACATATCATAGCCGCTCCCA
TCAGCTGCGAGCCGGCACGTTCAAGTTCGGCGCATTCTCACAAGGCGATG
CCGAGAAATCCTTCGCGGAGTTCCCGGTCGCCTTCCGTCATCCTGTCCAC
GGAGGCCCGATTTTCAACATGAGCGACCCTCCGCATATCCTGAAGAAGAT
CGCAAACGCCTGCTGGCACAGTGACCTCGCCGGTAAGCAGCGTGCCCTCG
CGATGTGGTGCACCGACGAACACGGCAACGAGAAGTTGGTTCGTTTCTCG
CTGAAGACCGGCGAGAGAGCGTACCGGCTTGTCGAGAACGACGGCGACAG
CCTTTCCACCGAGGAGCGAGTGGCATCCATCTCGACCTTCCGCAACTTGA
AGCCGGGGTGCTTCAACAGGAACAGCTGGAACTGCATGAACGTCGGCATG
TCTTCGAAGGTGATCGACCGCTGTTAGAAGCGTAATCATAGACCTCATTG
TCTCGGGTGGGCGGTAAACCTTTAGATGCGTGGAACGTGTCACGTGTATA
AATCCCCTTGCCTCGTGTCATGCCGCATTTATATCCCAAGAGGGTTACAA
GCTAGCGTTACTGAGCACGGCAAACATGGTAGTGCTAAGCGCTTGCAGTA
CTCTGTGTTGTGTTCGAAGGTCGTGTGCACGAATGACTTGTAGACGATGC
CGAGAGGGGCGCATGCAGTCTCGATCCATCTATCACCCGAGACCGTTCCA
TCATGTTGTCCGTTATTGTCCTAGTTGCTATCGGGGACGATGGTTCGTAT
CATCGACAAGGTTCAGTTCGACCGCGTGACCATGGGAGAATCGCCCGACC
TGGAGTTGGAGTGCTCCGCAGCACTAGCGTCGAGGGTGGATGCCTTCATC
GACATCTTCAACGGCAAGTGATAGCTGTTCGTATTGTCGCAGTATGTGGA
GGGGCCTGTCGCGTGACTATGTTCCGTGCTCTCCTTTTCCCCCTGAAGTT
TCCCGGCACCCGGGTACACTCTTTCTCTATACAGGGGTGGTTGCTCCGAA
GTCCGGAAATACCGGCAAACGCCCTGTCTCCCGGCGCAGCTCGTGACGGA
GATTTTTTTTTTTTAGCTTGATTGTTGAGTTTTCATGGGCTAAAAACCCG
CCACACTTGTGTTCTAACGGGATTGAACAGATATCGTAATTTGTCAATAA
AATCAGTTATTATATTATTGTTTTCAAATAAGTCTGTTAAACAGTGATAT
CGCACCAAAACAGCACATCGAAGACCAATACAGTCGAGGGACCCTTTTAG
TGCCGGTTGAATAGTGCCAGATGCCCGGTATAGTGCCGGTAAAATCTCTG
CACACAGGCGGAGCTCTCAATAGTGCCAGACCGGCACTAATTAAAGCATG
CCCGATATGGTGCCGGTTCGGCACTGCTGTCACCCCCAATAGTGCCGGTA
CTCCGCACGCGCGAAACACACACACGCACAACCCAGGGCAGAAACATAGA
CTCCACACACAGAAATAGGGTACACGTGCTGCTGCAGACCCGAACAGCTC
TACACAGGGGCGTACCGTGCCCTGTGCGGAAGGTGAACTGTGCCAACTAC
AGGACACCACGCCGCAAGACCCTCATGGTCACGGCTGCCAGGGAGGATGT
GGCGGGCGACTGCACGGCATTTGCGGCAGTGTCACCACGCCGCAAGACCC
TCATGGTCACGGCTGCCAGGGAGGATGTGGCGGGCGACTGCACGGCATTT
GCGGCAGTGTAGTTGATGTAGGCAACGAGAATCACCGCATCTGCAGCGCG
TGCGTCGCCAAAGCCGGCAAGCGCAAAGTGTCAGCAGCAGACAGCACTGG
GAAGGCACAATCTAAACGCCCGAAGGCCACGAATGGGGAGTAACAAGTCT
CAGCCTCGTGCGCGGCCAGATTTCCGCGCCAAGTGTGAGATGCTGAAGCT
GATGGATCAGAAGGTGACTCATGAGCAGATAGCAGATCGCTTCAAGTGCT
CGGAACGGTTGGTCCGGGATGTGAAGAAGAACAGGAAGAAGTACGAGACC
GAGGCTGCTGCAGGACGCGGAGGAAGCAAGAAAAACGTGCGCACAGGCAA
TAATCCGGAGGTGCGCTACTCTGCTGTTGTTTTAAAAAAATACGCGTAGT
TCCCGCGCCTTCTTTGCCTTTTTTTTTTTGCCGGGCCTTGTTTGCAAAGA
GTTTTCGTTTTTGCAAGGACCTTTTTCTGTAGCCTTGTTCGTCTATCTGA
TGTTCTTGTTCTTTTTTCTTCTTCTCTTGTCAAGTTGTTCCCTGTTCTCT
GTTCCCTTTCCCCATGTTTCTTTTCTCGACTGTTACAGTACTTGTTGAGC
TTATTCCCTCTCGTCGTTCGTTTGTGTCTTTTTTTGTGTTACCTTTTTTT
TCAACTTTCTTTGTTGTTTTATCGTTCGTGCGCTGCTGCGCCAGCATATA
AACTGCGAACCAAAAATGTGTACTTGTTTGTACTGTACTGGTACATTACA
TCGCACGCACACCTATTCTTTCAAACGAGTTACAATACATAAATACACAT
GCGGATGCAGCGGCGAGCTTCTGTGGTTTTTCAAATGCCCGGAAATGTTT
CCTTCCCACTACGATGCACTGTGCAACGAGGCTTAATGTTCGAAACTAAT
CGTGCTATCTTTTGTACCCTCTTTATTGTTTACTCCTCGTTTGACGGTCA
ATAGGTGGACGCCATAGCTCTTGACCTACTAGAGAAAGCCCGGAAGACCA
AGATGCCCGTCACGCGCGACGTCCTTCGAAGCTTCGGCCGTGCCGCCAGG
GCAACCCTGCTGGCTGATCCAGCAGCTTCTAAGGAAGTGAAGGCGAGGGT
CGAGGATTTCAAGGCCGGCGAAAGGTGGGCCAGGAACTCCGTGAAGCGCA
ACAGCATCGACAGCGTGAGACTTCATGGCGAGGCTGGTAGCGTCAACAAG
GAGGCCATCAAGGAAGCCATGGAGGAACTCAAGGCCCTTTGCGCAAAGTA
CCCGGCTAGGCTCATCTTTAACGTCGACGAGACAGGCCTCCAGTGGAAGC
TCATGCCCAGGCGCACGTACCTCTCCAACTTGGAGGATCGGAAGACGGCG
CGGGGCTCCAAGGGCATGTTCTTCAAGGATCGACTGTCTGCCATCATGTG
CGCCAATGCCGACGGCACTGCAAGGTTGACATGTCCATCATCGGGAAGGC
AAAGGGTCCCCCGCTGCTTCAACGACACGCCTTCACCTCTCAAGTACTTC
TCGCAGGCCAACGCCTGGTCCGACACCGCGACTTTCCGCAAGTGGTGGTG
TGAGGTCTTCCTCCCGTTCGTTCGGCGCTTCACTCACGAACCTGTGCTGC
TTCTGATGGACGGCTGTGCTTCTCACGGTGATCTAGTGGATGATCGGGGG
CAAGTTACCATCAAGTTCTACCCTCCAAACTGCACCTCCGTACACCAGCC
TATGGATCTGGGGATCATCTCCAAGACAAAGTGCAACTACAGGAAGGAGC
TGCTCGATGTGAAGACATCGACCATGTTGGTGGCTGACACCCTTCGTGCC
GAGGCCAAAGCTCGCAAAATGAAGGCCGGGACAATGGGGCTGGCGCAAGG
GCACCAACCTCACGTGCGGGATGCCGCTGAACTTCTCCAGAAAGCATGGG
CCAGCGTCACCGCCCAGGACATCGCCAGGTGAGGTTTGAGCATGTGCAAT
CGCTGTTTATAATGTAAACTGTTCAACTCGCGCCTTGGTGCACATAGCTT
TGGTGGTACAAAGGTAACGTGGGTAAGGTTGTACGGATAGATTATATTGT
TTTCGACTGAGTTTTCCAACATCCGAATACATATCTTCTTTGCTTTTCGC
AAAACTTGAGTCCTCCCCGCCTATGAGTCTTTGATCGTCCCTGGGTTCAT
CTAACATCCGCTTGTTGTCCACCCACAAACGTATGCATGACATTTTCTGC
GCTACCTGGGATCACGTGCTTTGTCAAAGCCGAGACTCTTCCGGACGAGA
TGGCCGCTGAGCTCACCAAGCAACACGGAAAGTCCCAGTTCCACGTCGCC
GAGCCTACATGGAAGGCTCTCACGGAGACTCTCAACACGTTGAGCATGAG
CGTGCACGAGGCGCACAAGCAGGGTACCCAAATCGAGGACGAGGACATCG
CCGAACTCATCGCCGAACTCCGCATCGAACCCGGAAAGCCGCTCCTGGAG
GAAGCGGTGAACGCGATTCAAGGGTGGGCTACCATCGAGGACGACGATGA
AGTGGTTGAGGCTCTCAGAGAGGATACGGTGGAAGACATGACGGCACAGC
TGGCTGGGACTCGAGTGTCTACCGGCCGCGAGGAGGAGGACGAGGAGGAG
GACAGCGGCGATGACAACACGGGGCTCGCGCGCCGTGTCCCACCGGCTTA
TGGTGAACTGTCGTCTCACTTCGGCGTCCTGGAAGCGGCAGCAGAGGAGA
GCGGCAATGGAGACGCGGCGCTCTACCTAGCGAAAGCGAAGATGGCGATG
ATTGCAGCGCATTCCAAGAGGCGGGTGCGCCAGGCAGACATGAGGGAGTT
TGTTGCTACGGAGTAAGGGCGGGGAACAGCTGTGGCACTAAAAAAACGGT
TGTTTGATTTTGCGGTGCGCTGCCCGTCGTGCATGTCATTTTTTTTTTTT
CTTGCAACATCGAAGCGGGTGCGCCAGACAAGGAGATAATTTGTCCCGAC
GTACAGTAGTGAAGGCAGGGGTTACAGCTGTGGTAACGGTTGTTTGATTT
TTTGCGGTGCGCTGCCTGTCGTGCTTGTCGTTTTTTTTTTTTTCCTTGCA
ACATGAGCGGGTGCGCTAGGCAAACAGGAGATAATTTGTCCCCACGTACA
GTAGTGAGGGCAGGGGTTTCAGCTGTGGTAACGGTTGTTTGATTTTTTGC
GGTGCGCTGCCTGTCGTGCTTGTCGTTTTTTTTTCTTGCAACATCGAAGC
GGGTGCGCCAGGCAAACGGGAGAGAATTTGTCCCGACGACAGTACACAAA
TAAGCAAATAAGTGAGGTGCAGAAGAAAATGAAGAACCAAAGAGCGCCCC
AAGACAACAAAAAGAAAACTCAACTCTGCCCACGCCCATGCTGGAACTTC
ACTCAACAGTACAGTAATAGTGTCGATCCATTTCGTTCTTTGTTGGCCCC
GTAAGCGTGGGCGCTACACCATAAATCGAACACAACCTCATTAGTGCCGG
TACCGGCACTAATGAGGGATTGGCCAGCCCTCAATAGTGCCGTTTTGGCA
CTATTCGCAATAGTGCCGGGTGCCCGATTTAGTGCCGGCGAACGCTCTGT
GCACGTACCGGCACTAAAAGGGTCCCTCGACTGTATACTGTTTTATTCGA
GACAACTTTTCTTTCGATTTCAAAATAGAGTGCGGCGAACTATTCCTCTC
ATCATTGCCGCGAACTGTTTGTGGCGTTGTTGGTGGTGGTGCAGGGGGTG
GTGTTTGTGTCGTTTTTGTGTGATAAATGTGCTGTGTAATGGCTGCAACG
GATAGATTTCGTGGCATATTATGCGGATGCCGGGGTGCGGAGTGCAGGAT
GGGGGCTCAGTGGTGAGTTTTGGGGCCCCGTGGAACGATTTTTGCAACAA
ATGATGCAATTAGCCAACAACATTGATAACTCTGCAGCTATGTATCGACA
TATCTCGACGAGGCGATGACTAATATTGTTGTTTCACGTCCGAACGCGAT
TGAACAAACAGGAGAGCACGGACCTACTTGTTTTTTTTTTATATATATTT
CCTCGCGCAATGTACACACTCTGTGCGCGTCGTTTGTCTCTTCCCACACG
GCCCCATGTATGTGTATGTGTATATATTCAGGAAACTTCGGCCGCTCGGA
GTACGCGCGCAAGAAAAGCCTCGACAAGAAAGCGGGCTACATTACATCGG
CCGACGACTCCAAACTAGAAGAACTCATGGACATCTTGCGTTTTTCCGAG
AAGTGGCGGTGCAATCTGGAGGAGAAGACGACGCTGGGCGACGTCACCTG
GAAGAAGCACTTCATCACGGAGTACTCGTG

Coding sequence (CDS) from alignment at P-littoralis_Contig1152:52888..59917-

>mRNA_P-littoralis_Contig1152.19.2 ID=mRNA_P-littoralis_Contig1152.19.2|Name=mRNA_P-littoralis_Contig1152.19.2|organism=Pylaiella littoralis U1_48|type=CDS|length=978bp|location=Sequence derived from alignment at P-littoralis_Contig1152:52888..59917- (Pylaiella littoralis U1_48)
AGGTATGGGGACCTCGCCGCCGTGCAAGACGCGGATGCGGCCGAACTCAT
GGGTTCTTTGGCATTTGACTGTGTCCACCTCAACAAGAACGGGCTCAGCT
ACGCACCGAACGGAGCGGGGTTGACGGGCCTTGTGGACGACACCACGTTC
TTCAATCCAATCTTCGCGGAGAACGGGGAGGAGGAACCGGATTTGGAGAA
GACCCTGGGCAAGATCATCGCCACGCAACACGTTGAGCTGCGAGCCGGCA
CGTTCAAGTTCGGCGCATTCTCACAAGGCGATGCCGAGAAATCCTTCGCG
GAGTTCCCGGTCGCCTTCCGTCATCCTGTCCACGGAGGCCCGATTTTCAA
CATGAGCGACCCTCCGCATATCCTGAAGAAGATCGCAAACGCCTGCTGGC
ACAGTGACCTCGCCGGTAAGCAGCGTGCCCTCGCGATGTGGTGCACCGAC
GAACACGGCAACGAGAAGTTGGTTCGTTTCTCGCTGAAGACCGGCGAGAG
AGCGTACCGGCTTGTCGAGAACGACGGCGACAGCCTTTCCACCGAGGAGC
GAGTGGCATCCATCTCGACCTTCCGCAACTTGAAGCCGGGGTGCTTCAAC
AGGAACAGCTGGAACTGCATGAACGTCGGCATGTCTTCGAAGTTGCTATC
GGGGACGATGGTTCGTATCATCGACAAGGTTCAGTTCGACCGCGTGACCA
TGGGAGAATCGCCCGACCTGGAGTTGGAGTGCTCCGCAGCACTAGCGTCG
AGGGTGGATGCCTTCATCGACATCTTCAACGGAAACTTCGGCCGCTCGGA
GTACGCGCGCAAGAAAAGCCTCGACAAGAAAGCGGGCTACATTACATCGG
CCGACGACTCCAAACTAGAAGAACTCATGGACATCTTGCGTTTTTCCGAG
AAGTGGCGGTGCAATCTGGAGGAGAAGACGACGCTGGGCGACGTCACCTG
GAAGAAGCACTTCATCACGGAGTACTCG