mRNA_P-littoralis_Contig115.2.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig115.2.2 vs. uniprot
Match: D7FPP0_ECTSI (Cryptochrome 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPP0_ECTSI) HSP 1 Score: 941 bits (2433), Expect = 0.000e+0 Identity = 466/542 (85.98%), Postives = 498/542 (91.88%), Query Frame = 2
Query: 320 MSSSEGPASIHWFRKGLRLHDNRALLEACDGADLVFPLFVMDSDPASPESRAGSARTAFLLESLQDLDEQLRAKGSRLFVVRGKPEEVLPDLFEEWNINKLTFEADSEPRSRERDREVGELARAAGVQVLIRGTSTMRNLENYHKLMGKKVGTYLKSYGAFMKLHDNAGPVPACAPCISGDLPTPRASPDDAGYDRFAIPSMADLGVAMPAKALKFRGGEREALSRLESVMAREDWISEFEKPKTSPNSIEPSTTVLSMYISHGCLSPRKFWHALCKVYSKKGGSKPPVSLKGQLLWREFNYFSGYSIPNFDKMVGNPVIRQIPWDKDEEKLSAWKEARTGFPWIDAAMTQLKDEGWIHHLARHAVACFLTRGDLWQSWEDGAAVFDELLLDADWSINNFNWQWLSCSAFFYQYFRCYSPVAFGKKTDKNGDYIKKYVPILRKFPPKYIYEPWTAPLEVQRGCGCIIGKDYPKPIVDHTDVSKANMAKMHDAYDANKEAEASESQTDGSAXXXXXXXXX----------RGAKPAPKKRAKR 1915
MSSS+ P+SIHWFRKGLRLHDNRALLEAC+G ++PLFV+DSDPASPESRAG RTAFLLESLQDLDEQLRAKGSRLFVVRGKPEEVLP LFEEWN+ KLTFEADSEPRSR RDREVG LA+ AGVQVLIRGTST+RNL+NYH LMGKK GTYLK+YGAF+KLHDNAGPVP CAP ISGDLP P ASPDDA YDRF+IPS++DLGV AKALKFRGGEREAL+RLE VMAREDWIS+FEKPKTSPNSIEPSTTVLSMYISHGCLS R+FWHALCKVY+KKGGSKPPVSLKGQLLW+EFNYFSGYSIP+FDKMVGNPVIRQIPWDKDEEKL AWKEARTGFPWIDAAMTQLKDEGWIHHLARHAVACFLTRGDLWQSWEDGAAVFDELLLDADWSINNFNWQWLSCSAFFYQYFRCYSP+AFGKKTD+NGDYIKKY+P LRKFP KYIYEPWTAPL+VQRGCGCIIGKDYPKPIVDH D SKANMAKM+DAYDA++EA+A+ES DG +XXXXXXXXX RGA+PA KR KR
Sbjct: 1 MSSSKEPSSIHWFRKGLRLHDNRALLEACNGTASLYPLFVLDSDPASPESRAGPLRTAFLLESLQDLDEQLRAKGSRLFVVRGKPEEVLPQLFEEWNVKKLTFEADSEPRSRARDREVGSLAKEAGVQVLIRGTSTLRNLQNYHMLMGKKQGTYLKTYGAFLKLHDNAGPVPDCAPDISGDLPAPGASPDDAEYDRFSIPSLSDLGVEPLAKALKFRGGEREALARLERVMAREDWISKFEKPKTSPNSIEPSTTVLSMYISHGCLSTRRFWHALCKVYTKKGGSKPPVSLKGQLLWKEFNYFSGYSIPSFDKMVGNPVIRQIPWDKDEEKLMAWKEARTGFPWIDAAMTQLKDEGWIHHLARHAVACFLTRGDLWQSWEDGAAVFDELLLDADWSINNFNWQWLSCSAFFYQYFRCYSPIAFGKKTDQNGDYIKKYLPALRKFPSKYIYEPWTAPLQVQRGCGCIIGKDYPKPIVDHADTSKANMAKMNDAYDAHQEAQAAESHDDGGSXXXXXXXXXXXXXXARSRARGAQPASSKRVKR 542
BLAST of mRNA_P-littoralis_Contig115.2.2 vs. uniprot
Match: A0A835Z8B1_9STRA (DNA photolyase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8B1_9STRA) HSP 1 Score: 573 bits (1476), Expect = 1.270e-193 Identity = 278/487 (57.08%), Postives = 351/487 (72.07%), Query Frame = 2
Query: 347 IHWFRKGLRLHDNRALLEACDGADLVFPLFVMDSDPASPESRAGSARTAFLLESLQDLDEQLRAKGSRLFVVRGKPEEVLPDLFEEWNINKLTFEADSEPRSRERDREVGELARAAGVQVLIRGTSTMRNLENYHKLMGKKVGTYLKSYGAFMKLHDNAGPVPACAPCISGDLPTPRASPDDAGYDRFAIPSMADLGVAMPAKALKFRGGEREALSRLESVMAREDWISEFEKPKTSPNSIEPSTTVLSMYISHGCLSPRKFWHALCKVY-SKKGGSKPPVSLKGQLLWREFNYFSGYSIPNFDKMVGNPVIRQIPWDKDEEKLSAWKEARTGFPWIDAAMTQLKDEGWIHHLARHAVACFLTRGDLWQSWEDGAAVFDELLLDADWSINNFNWQWLSCSAFFYQYFRCYSPVAFGKKTDKNGDYIKKYVPILRKFPPKYIYEPWTAPLEVQRGCGCIIGKDYPKPIVDHTDVSKANMAKMHDAYDA 1804
IHWFRKGLRLHDN ALL+A A V+P+F++D A+P ++ G R AFLLE+L DLD QL+ GSRL+VV+G P E P+LF EW+++ LTFE D+EP +++RD+EV ++A GV V + T+ NL+ Y G KSYG F+KL D+ G VP C ++ D+ S AG +PS+ A L + GGE AL+R++ +AR+ WI++FEKPKTSPNS+EPSTTVLS Y+ GCLS R F+H L ++Y + G +KPPVSL GQLLWREF Y G+++P+FD+M GNP+ RQ+PWD + + L+AW+E+RTG+P+IDA MTQL+ EGWIHHLARHAVACFLTRGDLWQSWE GA VFD+ LLDADWS+N NW WLSCS+FFYQYFRCYSPVAFGKKTD G YI+KY+P L+ +P KYIYEPW AP VQ GC++G DYPKPIVDH VSK NM +M AY A
Sbjct: 5 IHWFRKGLRLHDNPALLQAAKEAQQVYPVFMLDPHFANP-AKVGQLRYAFLLETLSDLDTQLKGIGSRLYVVQGNPAERFPELFREWSVSLLTFETDTEPYAKKRDQEVCKIAETCGVTVAQHASHTLHNLDRYEAKAG--ASPLPKSYGPFLKLFDSLGAVPQCVETVTVDIMPQDGSAVPAG--EHTVPSLDTTPYPPLANPLLYPGGETAALARMQLHLARKQWIAKFEKPKTSPNSLEPSTTVLSPYLKFGCLSSRLFYHKLAEIYKASPGHAKPPVSLHGQLLWREFFYMCGHTVPHFDRMEGNPICRQVPWDSNAQLLAAWEESRTGYPFIDAIMTQLRTEGWIHHLARHAVACFLTRGDLWQSWEAGAVVFDKYLLDADWSVNTANWMWLSCSSFFYQYFRCYSPVAFGKKTDPTGAYIRKYLPQLKNYPDKYIYEPWLAPKAVQEKAGCVVGCDYPKPIVDHKQVSKDNMDRMKAAYAA 486
BLAST of mRNA_P-littoralis_Contig115.2.2 vs. uniprot
Match: F2U6L6_SALR5 (DNA photolyase n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U6L6_SALR5) HSP 1 Score: 549 bits (1415), Expect = 3.090e-184 Identity = 283/510 (55.49%), Postives = 354/510 (69.41%), Query Frame = 2
Query: 329 SEGPASIHWFRKGLRLHDNRALLEACDGADLVFPLFVMDSDPASPESRAGSARTAFLLESLQDLDEQLRAKGSRLFVVRGKPEEVLPDLFEEWNINKLTFEADSEPRSRERDREVGELARAAGVQVLIRGTSTMRNLENYHKLMGKKVGTYLKSYGAFMKLHDNAGPVPAC--APCISGDLP--TPRASPDDAGYDRFAIPSMADLGVAM--PAKALKFRGGEREALSRLESVMAREDWISEFEKPKTSPNSIEPSTTVLSMYISHGCLSPRKFWHALCKVYSK-KGGSKPPVSLKGQLLWREFNYFSGYSIPNFDKMVGNPVIRQIPWDKDEEKLSAWKEARTGFPWIDAAMTQLKDEGWIHHLARHAVACFLTRGDLWQSWEDGAAVFDELLLDADWSINNFNWQWLSCSAFFYQYFRCYSPVAFGKKTDKNGDYIKKYVPILRKFPPKYIYEPWTAPLEVQRGCGCIIGKDYPKPIVDHTDVSKANMAKMHDAYDANKEAEASESQT 1837
S G SIHWFRKGLRLHDN ALL A GA V+P+FV+D A PE G R FLLESL+DLD+ LR GSRL+V++GKP + L + F+EW + +LTFE D+EP ++ RD + ELA G++V+ T+ + E Y G L +Y +F L G VPA AP D P + D RF +PS+ D+G ++F GGE EAL R+ + R+ WI+ FEKPKTSPN++EPSTT LS Y+ GCLSPR F+H L +VY++ + +KPPVSL GQLLWREF + GY++ NFD+M GN + RQI WD ++ L+AW+ ARTG+PWIDA MTQL+ EGW+HHLARHAVACFLTRGDL+QSWE GA VFD LL+DADW +N+ NW WLSCS+FFYQYFR YSPVAFGKKTD +G YI+KY+P L+ FP KYIYEPW AP VQR CGCIIGKDYP+PIVDH +VS AN A++ YDA K+AE ++ T
Sbjct: 2 SGGAVSIHWFRKGLRLHDNAALLAALKGAKQVYPVFVLDPHFAKPEF-VGVVRYNFLLESLRDLDKSLRTLGSRLYVLKGKPLQALEEKFKEWEVTRLTFERDTEPYAKLRDTQARELAEKHGIEVITTVGHTLHDPEQYIAKAGGADKIPL-TYSSFGTLFRRLGKVPAALSAP-TKEDFPQSSTLVRTDALDDHRFDVPSLKDMGYEWNDDEHEVRFPGGETEALERMRRHLQRKAWIAHFEKPKTSPNTLEPSTTGLSPYLKFGCLSPRLFYHELARVYAEYRDHAKPPVSLHGQLLWREFFHMCGYAVKNFDRMEGNRICRQIDWDTNDALLAAWENARTGYPWIDACMTQLRREGWLHHLARHAVACFLTRGDLYQSWEKGAQVFDRLLVDADWHLNSANWMWLSCSSFFYQYFRVYSPVAFGKKTDPSGAYIRKYLPQLKAFPDKYIYEPWKAPPGVQRSCGCIIGKDYPEPIVDHAEVSAANKARIRACYDALKQAEKAKKTT 508
BLAST of mRNA_P-littoralis_Contig115.2.2 vs. uniprot
Match: A0A3B1IHH9_ASTMX (Cryptochrome-1-like n=6 Tax=Astyanax mexicanus TaxID=7994 RepID=A0A3B1IHH9_ASTMX) HSP 1 Score: 546 bits (1408), Expect = 1.810e-183 Identity = 277/504 (54.96%), Postives = 352/504 (69.84%), Query Frame = 2
Query: 347 IHWFRKGLRLHDNRALLEACDGADLVFPLFVMDSDPASPES-RAGSARTAFLLESLQDLDEQLRAKGSRLFVVRGKPEEVLPDLFEEWNINKLTFEADSEPRSRERDREVGELARAAGVQVLIRGTSTMRNLENY-HKLMGKKVGTYLKSYGAFMKLHDNAGPVPACAPCISGDLPTPRASPDDAGYDRFAIPSMADLGV-AMPAKALKFRGGEREALSRLESVMAREDWISEFEKPKTSPNSIEPSTTVLSMYISHGCLSPRKFWHALCKVYSKKGGSKPPVSLKGQLLWREFNYFSGYSIPNFDKMVGNPVIRQIPWDKDEEKLSAWKEARTGFPWIDAAMTQLKDEGWIHHLARHAVACFLTRGDLWQSWEDGAAVFDELLLDADWSINNFNWQWLSCSAFFYQYFRCYSPVAFGKKTDKNGDYIKKYVPILRKFPPKYIYEPWTAPLEVQRGCGCIIGKDYPKPIVDHTDVSKANMAKMHDAYDANKEAEASESQTDGSA 1849
IHWFRKGLR+HDN AL A ++P+F++D P P++ + G R FL+E+L+DLD LR SRLFV+RG P EV P LFEEW + +LTFE DSEP S++RD+EV +LA+ GV+++ + + T+ NLE + GK TY++ K+ PVPA + TP + D Y +P++ +LG + + + GGE+EAL RL+ M R +W+ FEKP+TSPN+++PSTTVLS Y+ GCLS R FW L +VY K S PPVSL GQLLWREF Y + Y IPNF+KM GN + Q+ WD + E L+AW+EARTGFP+IDA MTQL+ EGWIHHLARHAVACFLTRGDLW SWE+G VF+ELLLDADW++N NWQWLS SAFF+QYFR YSP+AFGKKTDKNGDYIKKY+PIL+KFP +YIYEPW AP +Q GCI+GKDYP+PIVDH +SK N+ +M AY A+ S +DGSA
Sbjct: 6 IHWFRKGLRVHDNPALKYALHDCKHMYPVFILD--PWFPKNAQVGINRWRFLIEALKDLDSSLRKLNSRLFVIRGVPREVFPRLFEEWKVTRLTFEVDSEPYSQKRDKEVMDLAKQHGVEIITKISHTLYNLERVIEENNGKAPLTYVRFQTVLNKIGPPKRPVPAPTREDMKGVSTPSSETDKENY---GVPTLDELGQDSTTLGPVLYPGGEQEALRRLDEYMQRTNWVCSFEKPQTSPNALKPSTTVLSPYVKFGCLSARTFWWRLAEVYHGKKHSAPPVSLHGQLLWREFFYTAAYGIPNFNKMEGNTICVQVDWDSNPEHLAAWREARTGFPFIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGQKVFEELLLDADWALNAGNWQWLSASAFFHQYFRVYSPIAFGKKTDKNGDYIKKYLPILKKFPAQYIYEPWKAPKSIQEQAGCIVGKDYPRPIVDHDTISKKNIQRMKAAY-----AKRSPDLSDGSA 499
BLAST of mRNA_P-littoralis_Contig115.2.2 vs. uniprot
Match: W7TK49_9STRA (6-4 photolyase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TK49_9STRA) HSP 1 Score: 546 bits (1407), Expect = 2.790e-182 Identity = 280/517 (54.16%), Postives = 355/517 (68.67%), Query Frame = 2
Query: 344 SIHWFRKGLRLHDNRALLEACDGADLVFPLFVMDSDPASPESRAGSARTAFLLESLQDLDEQLRAKGSRLFVVRGKPEEVLPDLFEEWNINKLTFEADSEPRSRERDREVGELARAAGVQVLIRGTSTMRNLENY-HKLMGKKVGTYLKSYGAFMKLHDNAGPVPACAPCISGD-LPTP------------------RASPDDAGYDR-----FAIPSMADLGVAMPAKALKFRGGEREALSRLESVMAREDWISEFEKPKTSPNSIEPSTTVLSMYISHGCLSPRKFWHALCKVYSKKGG--SKPPVSLKGQLLWREFNYFSGYSIPNFDKMVGNPVIRQIPWDKDEEKLSAWKEARTGFPWIDAAMTQLKDEGWIHHLARHAVACFLTRGDLWQSWEDGAAVFDELLLDADWSINNFNWQWLSCSAFFYQYFRCYSPVAFGKKTDKNGDYIKKYVPILRKFPPKYIYEPWTAPLEVQRGCGCIIGKDYPKPIVDHTDVSKANMAKMHDAYDANKE 1813
S+HWFRKGLRLHDN ALLEAC+GA V+P+F++D A P+ G R F+L+++++LD+ LR GSRLFVV+G+P E LP LF EW + KLTFE+D+EP ++ RDR V ELA V V + T+ + E Y +L GK V T Y +F+KL + GPV A + LP P A ++ DR F++P ++ +G + GGE AL+R++ +A +I FEKPKTSPN++ PSTTVLS Y+ HG LS R F+H+L + ++ G ++PPVSL GQLLWREF Y G++ PNFDKMVGNP+ RQIPW K+ E L AW+EARTG+P+IDA MTQL++EGWIHHLARHA+ACFLTRGDLWQSWE+GA VF++ LLDADWS+N NW WLS SAFF+QYFR YSPVAFG KTDK G+YI+KY+P+LRK P KYIYEPW AP VQ GC++G+DYP P+VDH VSK M KM AYDANKE
Sbjct: 50 SLHWFRKGLRLHDNPALLEACEGATHVYPVFILDPHFAKPDV-IGVLRYRFMLQTIKNLDDNLREIGSRLFVVKGQPAEALPRLFREWGVTKLTFESDTEPYAKVRDRHVCELAAEHQVHVQTFPSHTLHDPEAYVARLQGKDVPTV---YQSFVKLFASMGPVAPVASTVDAKRLPPPALEYLSGQDGKKAGQGNGHAGGEEIEEDRTRGDDFSVPGLSGIGYPETDAPTLYPGGETAALARMQEHLANVKYIVTFEKPKTSPNALRPSTTVLSPYLKHGALSSRLFYHSLRSILAQHKGPHTQPPVSLVGQLLWREFFYLQGHATPNFDKMVGNPICRQIPWGKNAELLGAWEEARTGYPFIDACMTQLREEGWIHHLARHALACFLTRGDLWQSWEEGARVFEKYLLDADWSVNTGNWLWLSASAFFHQYFRVYSPVAFGAKTDKEGEYIRKYLPVLRKMPIKYIYEPWKAPKGVQETAGCVVGRDYPHPVVDHATVSKQLMGKMKAAYDANKE 562
BLAST of mRNA_P-littoralis_Contig115.2.2 vs. uniprot
Match: UPI001955C6E5 (cryptochrome circadian regulator 5 n=1 Tax=Pimephales promelas TaxID=90988 RepID=UPI001955C6E5) HSP 1 Score: 541 bits (1394), Expect = 2.080e-181 Identity = 276/489 (56.44%), Postives = 341/489 (69.73%), Query Frame = 2
Query: 344 SIHWFRKGLRLHDNRALLEACDGADLVFPLFVMDSDPASPESRAGSARTAFLLESLQDLDEQLRAKGSRLFVVRGKPEEVLPDLFEEWNINKLTFEADSEPRSRERDREVGELARAAGVQVLIRGTSTMRNLENY-HKLMGKKVGTYLKSYGAFMKLHDNAGPVPACAPCISGDLPTPRASPDDAGYDRFAIPSMADLGVAMPAKALK---FRGGEREALSRLESVMAREDWISEFEKPKTSPNSIEPSTTVLSMYISHGCLSPRKFWHALCKVYSKKGGSKPPVSLKGQLLWREFNYFSGYSIPNFDKMVGNPVIRQIPWDKDEEKLSAWKEARTGFPWIDAAMTQLKDEGWIHHLARHAVACFLTRGDLWQSWEDGAAVFDELLLDADWSINNFNWQWLSCSAFFYQYFRCYSPVAFGKKTDKNGDYIKKYVPILRKFPPKYIYEPWTAPLEVQRGCGCIIGKDYPKPIVDHTDVSKANMAKMHDAY 1798
S+HWFRKGLRLHDN AL+ A ++PLF++D S +R G R FL+E+L+DLD L+ SRLFVV G P EVLP LFE+W I +LTFE D+EP SR RD EV +LA+ GV+V+ + + T+ N++ + GK TY++ + PVPA + TP + + ++F IP++ DLG + A +L F GGE+EAL RL+ M R W+ +FEKP+TSPN++ PSTTVLS Y+ GCLS R FW L VY K S+PPVSL GQLLWREF Y + IPNFD+M GNP Q+ WD E L+AW+EARTGFP+IDA MTQL+ EGWIHHLARHAVACFLTRGDLW SWE+G VF+ELLLDADWS+N NWQWLS SAFF+QYFR YSPVAFGKKTDKNGDYIKKY+P+L+KFP +YIYEPW AP +Q GCI+GKDYP+PIVDH V K N+ +M AY
Sbjct: 5 SVHWFRKGLRLHDNPALIAALKDCRHIYPLFLLDPW-YSTNTRIGINRWRFLMEALKDLDSSLKKLNSRLFVVSGPPTEVLPKLFEKWEITRLTFEVDTEPYSRSRDEEVMKLAKEYGVEVIPKISHTLYNIDRIIDENNGKTPLTYVRFQSVLKAIGPPKKPVPAPTKEDMSGVSTPISEDHE---EKFGIPTLEDLG--LDASSLGPDLFPGGEQEALRRLDEHMQRPGWVCKFEKPQTSPNALTPSTTVLSPYVRSGCLSARTFWWRLSDVYRAKKHSEPPVSLHGQLLWREFFYTTAVGIPNFDRMEGNPHCVQVDWDNHPEHLAAWREARTGFPFIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGQKVFEELLLDADWSLNAGNWQWLSASAFFHQYFRVYSPVAFGKKTDKNGDYIKKYLPLLKKFPAEYIYEPWKAPRSIQERAGCIVGKDYPRPIVDHEVVHKKNIQRMKAAY 487
BLAST of mRNA_P-littoralis_Contig115.2.2 vs. uniprot
Match: A0A3B4DKP2_PYGNA (Cryptochrome-1-like n=6 Tax=Serrasalmidae TaxID=42495 RepID=A0A3B4DKP2_PYGNA) HSP 1 Score: 541 bits (1393), Expect = 7.430e-181 Identity = 276/501 (55.09%), Postives = 347/501 (69.26%), Query Frame = 2
Query: 347 IHWFRKGLRLHDNRALLEACDGADLVFPLFVMDSDPASPES-RAGSARTAFLLESLQDLDEQLRAKGSRLFVVRGKPEEVLPDLFEEWNINKLTFEADSEPRSRERDREVGELARAAGVQVLIRGTSTMRNLENY-HKLMGKKVGTYLKSYGAFMKLHDNAGPVPACAPCISGDLPTPRASPDDAGYDRFAIPSMADLGVAMPAKALK-FRGGEREALSRLESVMAREDWISEFEKPKTSPNSIEPSTTVLSMYISHGCLSPRKFWHALCKVYSKKGGSKPPVSLKGQLLWREFNYFSGYSIPNFDKMVGNPVIRQIPWDKDEEKLSAWKEARTGFPWIDAAMTQLKDEGWIHHLARHAVACFLTRGDLWQSWEDGAAVFDELLLDADWSINNFNWQWLSCSAFFYQYFRCYSPVAFGKKTDKNGDYIKKYVPILRKFPPKYIYEPWTAPLEVQRGCGCIIGKDYPKPIVDHTDVSKANMAKMHDAYDANKEAEASESQTD 1840
IHWFRKGLRLHDN AL A + ++P+F++D P P++ + G R FL+E+L+DLD L+ SRLFVVRG P +V P LF+EW + +LTFE D+EP S+ RD+EV +LA+ GV+V+ + + T+ N+E + GK TY++ + PVPA + TP + D Y IP++ +LG + GGE+E+L RLE M R W+ FEKP+TSPN++ PSTTVLS Y+ GCLS R FW L +VY + S PPVSL GQLLWREF Y + IPNF KM GNP Q+ WD + E L+AWKEARTGFP+IDA MTQL+ EGWIHHLARHAVACFLTRGDLW SWE+G VF+ELLLDADWS+N NWQWLS SAFF+QYFR YSP+AFGKKTDKNGDYIKK++P+L+KFPP+YIYEPW AP VQ+ GCI+GKDYP+PIVDH VSK N+ +M AY A + + S SQT+
Sbjct: 12 IHWFRKGLRLHDNPALKAALHDCEHIYPIFILD--PWFPKNAQVGINRWRFLVEALKDLDSSLKKLKSRLFVVRGVPRDVFPKLFKEWKVTRLTFEVDTEPYSQIRDKEVMDLAKQHGVEVITKISHTLYNIERIIEENNGKPPLTYVRFQTVVKAIGTPKRPVPAPTREDMKGILTPSSDKHDENY---GIPTLKELGQDSSTLGPDLYPGGEQESLRRLEEYMQRTGWVCSFEKPQTSPNALSPSTTVLSPYVKFGCLSARTFWWGLAEVYQGRKHSAPPVSLHGQLLWREFFYTAAVGIPNFSKMEGNPNCVQVDWDSNPEHLAAWKEARTGFPFIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGQKVFEELLLDADWSLNAGNWQWLSASAFFHQYFRVYSPIAFGKKTDKNGDYIKKFLPVLKKFPPEYIYEPWKAPKSVQQQAGCIVGKDYPRPIVDHDVVSKRNIQRMKAAY-AKRHGDPSSSQTE 506
BLAST of mRNA_P-littoralis_Contig115.2.2 vs. uniprot
Match: H2MAP7_ORYLA (Cryptochrome-1 n=10 Tax=Oryzias TaxID=8089 RepID=H2MAP7_ORYLA) HSP 1 Score: 539 bits (1389), Expect = 1.300e-180 Identity = 277/504 (54.96%), Postives = 348/504 (69.05%), Query Frame = 2
Query: 347 IHWFRKGLRLHDNRALLEACDGADLVFPLFVMDSDPASPESRAGSARTAFLLESLQDLDEQLRAKGSRLFVVRGKPEEVLPDLFEEWNINKLTFEADSEPRSRERDREVGELARAAGVQVLIRGTSTMRNLENY-HKLMGKKVGTYLKSYGAFMKLHDNAGPVPACAPCISGDLPTPRASPDDAGYDR-----FAIPSMADLGVAMPAKALK-FRGGEREALSRLESVMAREDWISEFEKPKTSPNSIEPSTTVLSMYISHGCLSPRKFWHALCKVYSKKGGSKPPVSLKGQLLWREFNYFSGYSIPNFDKMVGNPVIRQIPWDKDEEKLSAWKEARTGFPWIDAAMTQLKDEGWIHHLARHAVACFLTRGDLWQSWEDGAAVFDELLLDADWSINNFNWQWLSCSAFFYQYFRCYSPVAFGKKTDKNGDYIKKYVPILRKFPPKYIYEPWTAPLEVQRGCGCIIGKDYPKPIVDHTDVSKANMAKMHDAYDANKEAEASESQT 1837
IHWFRKGLRLHDN AL+ A ++PLF++D ++ AG R FL+ SLQDLD LR SRLFVVRGKPEEVLP LF +WN+ KLT+E D+EP SR RD+ V LA +QV+ + + T+ +++ + GK TY + L P+PA PT + A + + IPS+ +LG+ + A + F GGE+EAL RL++ M R W+ FEKP TSPNS+ PSTTVLS Y++ GCLS R FW L +VY K S PPVSL GQLLWREF Y + IPNF+KM GNP Q+ WD+++E L+AW+EARTGFP+IDA MTQL+ EGWIHHLARHAVACFLTRGDLW SWE+G VF++LLLD DW++N NWQWLS S FF+Q+FR YSPVAFGKKTDKNGDYIKKY+PIL+KFPP+YIYEPW AP VQ+ GCI+GKDYPKPI++H +SK N+ +M AY A + + ++ES T
Sbjct: 6 IHWFRKGLRLHDNPALMAALRDCKELYPLFILDPY-LYDQNLAGINRLRFLISSLQDLDCSLRKLNSRLFVVRGKPEEVLPKLFTKWNVTKLTYEYDTEPYSRSRDKNVTMLAEEQRIQVIYKISHTLYDIDRIIEENNGKPPLTYNRLRDIVKALGSPKKPIPA---------PTVEDMKNIAPFSEKHKPEYGIPSLEELGLDTSSLAEEIFPGGEQEALRRLDTYMQRPGWVCSFEKPNTSPNSLSPSTTVLSPYVTFGCLSARTFWWRLAEVYQGKKHSDPPVSLHGQLLWREFFYTASVGIPNFNKMTGNPACTQVDWDENQEYLAAWREARTGFPFIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGQKVFEKLLLDGDWALNAGNWQWLSASTFFHQFFRVYSPVAFGKKTDKNGDYIKKYLPILKKFPPQYIYEPWKAPRSVQQAAGCIVGKDYPKPIIEHEVISKKNIQRMKQAY-ARRTSGSTESPT 498
BLAST of mRNA_P-littoralis_Contig115.2.2 vs. uniprot
Match: A0A3Q2CCJ5_CYPVA (Cryptochrome-1-like n=2 Tax=Cyprinodon TaxID=28741 RepID=A0A3Q2CCJ5_CYPVA) HSP 1 Score: 538 bits (1385), Expect = 5.190e-180 Identity = 273/497 (54.93%), Postives = 342/497 (68.81%), Query Frame = 2
Query: 347 IHWFRKGLRLHDNRALLEACDGADLVFPLFVMDSDPASPESRAGSARTAFLLESLQDLDEQLRAKGSRLFVVRGKPEEVLPDLFEEWNINKLTFEADSEPRSRERDREVGELARAAGVQVLIRGTSTMRNLENY-HKLMGKKVGTYLKSYGAFMKLHDNAGPVPACAPCISGDLPTPRASPDDAGYDRFAIPSMADLGVAMPAKALK-FRGGEREALSRLESVMAREDWISEFEKPKTSPNSIEPSTTVLSMYISHGCLSPRKFWHALCKVYSKKGGSKPPVSLKGQLLWREFNYFSGYSIPNFDKMVGNPVIRQIPWDKDEEKLSAWKEARTGFPWIDAAMTQLKDEGWIHHLARHAVACFLTRGDLWQSWEDGAAVFDELLLDADWSINNFNWQWLSCSAFFYQYFRCYSPVAFGKKTDKNGDYIKKYVPILRKFPPKYIYEPWTAPLEVQRGCGCIIGKDYPKPIVDHTDVSKANMAKMHDAYDANKEAEASES 1831
IHWFRKGLRLHDN AL+ A ++P+F+MD + S E G R FL+ +L+DLD LR SRLFV+RGKPEEV P LF +W + KLT+E D+EP S RD +V LA+ G+ V+ + + T+ N+E + GK TY + KL P+PA D+ TP + D+ Y IP++ + G+ + + F GGE+EAL RL+ M + W+ FEKP+TSPNS+ PSTTVLS Y++ GCLS R FW L +VY K S PPVSL GQLLWREF Y IPNF+KM GN V Q+ WD +++ L+AW+EARTGFP+IDA MTQL+ EGWIHHLARHAVACFLTRGDLW SWE+G VF+ELLLD DW++N NWQWLS SAFF+Q+FR YSP+AFGKKTDKNGDYIKKY+P+L KFPP+YIYEPW AP VQ+ GCI+GKDYP PIV H VSK N+ +M +AY A + +SES
Sbjct: 6 IHWFRKGLRLHDNPALIAALKDCKELYPVFIMDPNLHSTE--VGINRWRFLIGALKDLDSSLRKLNSRLFVLRGKPEEVFPKLFSKWKVTKLTYEYDTEPYSLSRDEKVTSLAKETGIDVIYKISHTLFNIERIIEENDGKPPLTYKRLQAIVAKLGPPKKPIPAPTLDDMKDVKTPCSEKDEKKY---GIPTLEEFGLDSTSLGEELFPGGEQEALRRLDEHMKKTGWVCSFEKPQTSPNSLSPSTTVLSPYVTFGCLSARTFWWRLTEVYRGKKHSDPPVSLHGQLLWREFFYTCSLGIPNFNKMKGNTVCTQVDWDTNQDYLAAWREARTGFPFIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGQKVFEELLLDGDWALNAGNWQWLSASAFFHQFFRVYSPIAFGKKTDKNGDYIKKYLPLLEKFPPQYIYEPWKAPRSVQQAAGCIVGKDYPHPIVQHEQVSKKNIQRMKEAY-ARRSTASSES 496
BLAST of mRNA_P-littoralis_Contig115.2.2 vs. uniprot
Match: A0A672JPL0_SALFA (Photolyase/cryptochrome alpha/beta domain-containing protein n=1 Tax=Salarias fasciatus TaxID=181472 RepID=A0A672JPL0_SALFA) HSP 1 Score: 536 bits (1381), Expect = 3.020e-179 Identity = 270/486 (55.56%), Postives = 341/486 (70.16%), Query Frame = 2
Query: 347 IHWFRKGLRLHDNRALLEACDGADLVFPLFVMDSDPASPESRAGSARTAFLLESLQDLDEQLRAKGSRLFVVRGKPEEVLPDLFEEWNINKLTFEADSEPRSRERDREVGELARAAGVQVLIRGTSTMRNLENY-HKLMGKKVGTYLKSYGAFMKLHDNAGPVPACAPCISGDLPTPRASPDDAGYDRFAIPSMADLGVAMPAKALK-FRGGEREALSRLESVMAREDWISEFEKPKTSPNSIEPSTTVLSMYISHGCLSPRKFWHALCKVYSKKGGSKPPVSLKGQLLWREFNYFSGYSIPNFDKMVGNPVIRQIPWDKDEEKLSAWKEARTGFPWIDAAMTQLKDEGWIHHLARHAVACFLTRGDLWQSWEDGAAVFDELLLDADWSINNFNWQWLSCSAFFYQYFRCYSPVAFGKKTDKNGDYIKKYVPILRKFPPKYIYEPWTAPLEVQRGCGCIIGKDYPKPIVDHTDVSKANMAKMHDAY 1798
IHWFRKGLRLHDN ALL A +++PLF++D D + G+ R FLL +L+DLD LR SRLFVV GKPEEV P LF+EWN+ KLT+E D+EP S RD +V LA+ GV+V + + T+ +++ + GK TY G +L P+PA D+ TP + D +++ IP++ D+GV + + + F GGE+EAL RL+ M+R W+ FEKP+TSPNS+ PSTTVLS Y++ GCLS R FW L VY K S PPVSL GQLLWREF Y + IPNF+KMVGN V Q+ WD + E L+AW+EARTGFP+IDA MTQL+ EGWIHHLARHAVACFLTRGDLW SWE+G VF++ LLD DW++N NWQWLS S FF+Q++R YSPVAFGKKTDK GDYIKKY+P+L+KFP +YIYEPW APL VQR GCI+G+DYP+PIV+H +SK N+ +M AY
Sbjct: 6 IHWFRKGLRLHDNPALLAALRDCKVLYPLFIVDPDC----TYGGNNRKRFLLGALKDLDCSLRKLNSRLFVVTGKPEEVFPKLFKEWNVTKLTYEYDTEPYSLNRDSKVTALAKEHGVEVFYKVSHTLYDMDRIIEENNGKTPLTYKSFQGIVKRLGPPKKPIPAPVLGDMKDVKTPCSEKHD---EKYGIPTLEDVGVDDTSLSEELFPGGEQEALRRLDEHMSRTGWVCNFEKPQTSPNSLSPSTTVLSPYVAFGCLSARTFWWRLSDVYRGKKHSDPPVSLHGQLLWREFFYTASVGIPNFNKMVGNHVCTQVDWDTNAEYLAAWREARTGFPFIDAIMTQLRREGWIHHLARHAVACFLTRGDLWISWEEGQKVFEDYLLDHDWALNAGNWQWLSASTFFHQFYRVYSPVAFGKKTDKRGDYIKKYLPVLKKFPEQYIYEPWKAPLSVQRAAGCIVGQDYPRPIVEHEVISKTNIQRMKQAY 484 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig115.2.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig115.2.2 >prot_P-littoralis_Contig115.2.2 ID=prot_P-littoralis_Contig115.2.2|Name=mRNA_P-littoralis_Contig115.2.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=614bp MPTREALLGLLLIRPVFSFPRPLWRAPFLQGTFCVRRVGSVTRLPLLSVGback to top mRNA from alignment at P-littoralis_Contig115:8544..18122+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig115.2.2 ID=mRNA_P-littoralis_Contig115.2.2|Name=mRNA_P-littoralis_Contig115.2.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=9579bp|location=Sequence derived from alignment at P-littoralis_Contig115:8544..18122+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig115:8544..18122+ >mRNA_P-littoralis_Contig115.2.2 ID=mRNA_P-littoralis_Contig115.2.2|Name=mRNA_P-littoralis_Contig115.2.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1842bp|location=Sequence derived from alignment at P-littoralis_Contig115:8544..18122+ (Pylaiella littoralis U1_48)back to top |