mRNA_P-littoralis_Contig1146.10.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1146.10.1
Unique NamemRNA_P-littoralis_Contig1146.10.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1146.10.1 vs. uniprot
Match: A0A6H5KQZ5_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQZ5_9PHAE)

HSP 1 Score: 303 bits (775), Expect = 1.330e-91
Identity = 190/485 (39.18%), Postives = 253/485 (52.16%), Query Frame = 2
Query:  494 DMFLLIYSRFFHMAPAPSPKRHRDGSYDEGWDALWHIRTFETMLNQAWSGACLVGRWLSFDEQMILCVHRTAKFMTRYMPKKPIKNGLKLWAVACFTGYCFLSYTDGGFVGDPKLRGWASCPLGRTCRMVLFVLFGACDEFATQLRQSGTYMAMDNFFSSPILFLCLLWHGIFAVGTLKDIHRGASQAVQYWTVTRQTPRKKGDMVFARFGFLAFAQWKDSKLVRLLSTIHVKKSDFIPIPYSKFAAGD--KKEDSWQPLCRFHYNKFMVGVDLADQLNGYYQSLHKSKNYFWRRVFEQKLMQACSNAWLLYRWWLDDMLAQVKAEI-ATLNEGGHADGDTAKEG--------LQLAALLEEQADLERLRKKSRVQWLRALAKHLLSQSTSKLAAKGGRRPAPAPFKKTADRHQHVCN-ISRRRDCSSPGCKGSPTPKTKAPKRARRAKVSQACFCLSCRSVGG----VVICTPCHADDNQHQAA 1900
            ++F+L Y RFF++APA   K ++D   D  +D   HIR  E + N+ WS     G WLS+DEQM+    R    + RY   KPIKNG+K WA+ C +GYCF+   DGGF GD KLR +ASCPLGR+ R V++VL  AC+ F+ ++   G  +AMDNFF+   L  CL    IFAVGTL+    G   A   W        ++G M+ AR   L   +W DS+ V L+ST HV   ++ P+ Y K AA +  +K  S QPL R  Y K M GVD+ADQ  G +   H+   +FWRRVF+QK  QA SN WLL+  W   ++ Q  A + A   +GG  D   A+EG        L +A L E Q  L++  K  RV W R LA HL+S         G RR        T     ++ N     R C   GCK  P     +P    R +   AC+C  C +  G    +++CT CH     H AA
Sbjct:    8 NLFVLFYGRFFNLAPATG-KLNKD---DPQYDCKHHIRKLEDVFNKCWSELVEPGAWLSYDEQMVKSTARVMFALMRYNKAKPIKNGIKCWAICCPSGYCFVQSIDGGFSGDIKLRPYASCPLGRSARTVMYVLLEACETFSNKIIGKGITVAMDNFFTGAPLLRCLATRDIFAVGTLRGNRIGVELANYLWAKEGMAATERGQMLTARSDELVIVKWIDSQEVYLMSTKHVFADEWEPLAYEKRAANNNGEKVSSRQPLARKEYVKNMGGVDVADQRLGSHAHKHRPMTFFWRRVFDQKFAQAVSNGWLLFYEWAGVLVTQCTAALEAATQDGGMGDAGEAEEGGVAADSCDLTVAELREFQTLLKKAMKMERVDWDRRLANHLMSLCNVGHTENGARRA-------TKPSESYLVNGACSSRVCHGRGCKTPPG----SPYAGTRTR--GACWCDICTNGLGKDRALILCTKCHKVPEAHVAA 475          
BLAST of mRNA_P-littoralis_Contig1146.10.1 vs. uniprot
Match: A0A6H5JW40_9PHAE (HTH La-type RNA-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW40_9PHAE)

HSP 1 Score: 316 bits (810), Expect = 2.040e-90
Identity = 180/449 (40.09%), Postives = 242/449 (53.90%), Query Frame = 2
Query:  191 FTIMFPLMVVNFLVKETNDYQTFCDAPPPEGKEDKREERHKKKKSTLGHASWPKEGITLGTMYAVIGIVLTLGLVRLPEMIDHWDKDVFHDFLLVRNSMSRDMFLLIYSRFFHMAPAPSPKRH--RDGSYDEGWDALWHIRTFETMLNQAWSGACLVGRWLSFDEQMILCVHRTAKFMTRYMPKKPIKNGLKLWAVACFTGYCFLSYTDGGFVGDPKLRGWASCPLGRTCRMVLFVLFGACDEFATQLRQSGTYMAMDNFFSSPILFLCLLWHGIFAVGTLKDIHRGASQAVQYWTVTRQTPRKKGDMVFARFGFLAFAQWKDSKLVRLLSTIHV----------KKSD-------FIPIPYSKFA----------------AGD--KKEDSWQPLCRFHYNKFMVGVDLADQLNGYYQSLHKSKNYFWRRVFEQKLMQACSNAWLLYR 1426
            F +MFP   ++  V +TN Y   C  P   G +D R+    +K  TLG  + P+       +Y ++GI +T+GL +   M  HW + +  D+ LVR  MSRD+F L+Y RF H +   +P R    D + +  +D+ WHIR  E +LN AW+      +WL +DEQM+  V   A ++ R+ PKKPI +G+KL+A+    GYCF+S  DGG  GDPKLR W  CPLGRT R VL VL GAC +F  ++  SG Y+AMDN+F SP LF CL  H IFAVGT +    G   AV Y     + P ++G+M FAR G +AF QW DSK + L S+IH+          KK D       F P+PY  F                 AG   K  +  QP  R  Y   M GVD ADQ NG +   HKS    WRRV E K  Q  +N +++++
Sbjct:  640 FDMMFPDEAIDLFVDKTNKYVNLCTTPSLPGAKDTRKAHQVEKTRTLGMVTLPEPAFERKHIYGMLGITITMGLTKKTRMRKHWSRSLHDDYPLVRECMSRDLFELLYCRFIHCSDGNAPPRWAGEDKTPNPEFDSKWHIRELEDILNNAWTENMDFNQWLCYDEQMVKTVSTFAHYLMRHSPKKPITHGMKLFAICDIEGYCFVSSVDGGMNGDPKLRVWFDCPLGRTTRHVLHVLLGACKKFGDKIDGSGAYIAMDNYFKSPTLFECLASHDIFAVGTCRSNRTGG--AVPYLQSLDRRPVERGEMHFARAGNVAFVQWLDSKEIILCSSIHIAQPHAAIGEPKKEDSDGGDDHFAPLPYRCFVCPLPSRPHPFMFSLRKAGQAGKSLELQQPWMRKDYVANMGGVDTADQQNGSHTHDHKSYTNHWRRVMEGKFEQTFTNIFVMFK 1086          
BLAST of mRNA_P-littoralis_Contig1146.10.1 vs. uniprot
Match: A0A6H5JJP9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJP9_9PHAE)

HSP 1 Score: 304 bits (778), Expect = 3.030e-86
Identity = 218/663 (32.88%), Postives = 300/663 (45.25%), Query Frame = 2
Query:  191 FTIMFPLMVVNFLVKETNDYQTFCDAPPPEGKEDKREERHKKKKSTLGHASWPKEGITLGTMYAVIGIVLTLGLVRLPEMIDHWDKDVFHDFLLVRNSMSRDMFLLIYSRFFHMAPAPSPKRHR------------------------------------------DGSYDEGW-----------DALWHIRTFETMLNQAWSGACLVGRWLSFDEQMILCVHRTAKFMTRYMPKKPIKNGLKLWAVACFTGYCFLSYTDGGFVGDPKLRGWASCPLGRTCRMVLFVLFGACDEFATQLRQSGTYMAMDNFFSSPILFLCLLWHGIFAVGTLKDIHRGASQAVQYWTVTRQTPRKKGDMVFARFGFLAFAQWKDSKLVRLLSTIHV----------KKSD-------FIPIPYSKFA----------------AGD--KKEDSWQPLCRFHYNKFMVGVDLADQLNGYYQSLHKSKNYFWRRVFEQKLMQACSNAWLLYRWWLDDMLAQVKAEIATLNEGGHADGDTAKEGLQLAALLEEQADLERLRKKSRVQWLRALAKHLLSQSTSKLAAKGGRRPAPAPFKKTADRHQHVCNISRRRDCSSPGCKGSPTPKTKAPKRARRAKVSQACFCLSC---RSVG--GVVICTPCHADDNQHQAA 1900
            F +MFP   V+  V +TN Y   C  PP  G +D R+    KK  TLG  + P+       +Y ++GI +T+GL     M  HW + +  D+ LVR  MSRD+F L+YSRF H +   +P R                                            DG+    W           D+ WHIR  E +LN AW+       WL +DEQM+  V   A ++ R  PK+PI +G+KL+A+    GYCF+S  DGG  GDPKLR W  CPLGRT R VL VL GAC +F  ++  SG ++AM N F+SP LF CL  H IFAVGT +    G   AV Y     + P ++G+M FAR G +AF QW DSK + L S+IH+          KK D       F P+PY  F                 AG   K  +  QP  R  Y   M GV+ AD+ NG +   H+S    WR V E K  Q  +N +++++ ++  +  Q    I    EGG  + +  +   +L  LL E   L RL K  R  W   L+  L+++        GGR   PA      D+     ++  +R C  PGCK               +K  + C C      +  G  GV++C  C  +  +H  A
Sbjct:  535 FDMMFPDEAVDLFVDKTNKYVNLCTTPPLPGAKDTRKAHQVKKTRTLGMVTLPEPAFERKHIYGMLGITITMGLTMKTRMRKHWSRSLHDDYPLVRKCMSRDLFELLYSRFIHCSDGNAPPRWTGXMKTRMRKHWSRSLHDDYPLVRKCMSRDLFELLYSRFIHCSDGNAPPRWTGEDKTPNPEFDSKWHIRELEDILNNAWTENMDFNEWLCYDEQMMRTVSTFAHYLMRDNPKEPITHGMKLFAICDIEGYCFVSSVDGGMNGDPKLRVWFDCPLGRTTRHVLHVLLGACKKFGDKIDGSGVHIAMSNNFTSPTLFECLASHDIFAVGTCRSNRTGG--AVPYLQSLDRRPVERGEMHFARAGNVAFVQWLDSKEIILCSSIHIAQPHAAIGEPKKEDDDGGDDHFAPLPYRCFVCIPPSRPHPFMFSLRKAGQAGKSLELQQPWMRKDYVANMGGVNTADRQNGSHTHDHESYTNHWRGVMEGKFKQTFTNIFVMFKKYVSLLEGQANKRI----EGGGVELEVVE---KLDRLLVE---LGRLAKMERAVWDEMLSTELMARCNVGRPNNGGR---PAEVTGAPDKVWGSISVKTQRKCMHPGCK---------------SKTWKGCACAELCVGKQAGDRGVLMCQACFNNPVRHGRA 1167          
BLAST of mRNA_P-littoralis_Contig1146.10.1 vs. uniprot
Match: A0A6H5KPD8_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPD8_9PHAE)

HSP 1 Score: 216 bits (551), Expect = 3.540e-61
Identity = 114/282 (40.43%), Postives = 157/282 (55.67%), Query Frame = 2
Query:  374 MYAVIGIVLTLGLVRLPEMIDHWDKDVFHDFLLVRNSMSRDMFLLIYSRFFHMAPAPSPKRHRDGSYDEGWDALWHIRTFETMLNQAWSGACLVGRWLSFDEQMILCVHRTAKFMTRYMPKKPIKNGLKLWAVACFTGYCFLSYTDGGFVGDPKLRGWASCPLGRTCRMVLFVLFGACDEFATQLRQSGTYMAMDNFFSSPILFLCLLWHGIFAVGTLKDIHRGASQAVQYWTVTRQTPRKKGDMVFARFGFLAFAQWKDSKLVRLLSTIHVKKSDFIPIPY 1219
            +Y+V G              DH   +   ++ +VR  M RD+F+L Y RFFH+APA   K ++D   D  +D   HIR  E +LN+ WS     G WLS+DEQM+    R    + RY   KPIK+G+K WA+ C +GY F+   DGGF GD KLR +ASCPLGR+ R V++VL  AC+ F+ ++   G  +AMDNFF+   L  CL    IFAVGTL+    G   A+  W        ++G M+ AR   L   +W DS+ V L+ST HV   ++ P+ Y
Sbjct:   34 LYSVTGXXXXXXXXXXXXXXDHCGVEAHDNYPMVRACMPRDLFVLFYGRFFHLAPATG-KLNKD---DPKYDCKHHIRKLEDVLNKCWSELVEPGAWLSYDEQMVKSTARVMLALMRYNKAKPIKHGIKCWAICCPSGYSFVQSIDGGFSGDIKLRPYASCPLGRSARTVMYVLLEACETFSNKIIGKGITVAMDNFFTGAPLLGCLATRDIFAVGTLRGNRIGVELAIYLWAKEGMAATERGQMLTARSDELVIVKWIDSQEVYLMSTKHVFADEWEPLAY 311          
BLAST of mRNA_P-littoralis_Contig1146.10.1 vs. uniprot
Match: A0A6H5KG44_9PHAE (DDE_Tnp_1_7 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG44_9PHAE)

HSP 1 Score: 204 bits (519), Expect = 2.800e-57
Identity = 109/255 (42.75%), Postives = 145/255 (56.86%), Query Frame = 2
Query:  605 RTFETMLNQAWSGACLVGRWLSFDEQMILCVHRTAKFMTRYMPKKPIKNGLKLWAVACFTGYCFLSYTDGGFVGDPKLRGWASCPLGRTCRMVLFVLFGACDEFATQLRQSGTYMAMDNFFSSPILFLCLLWHGIFAVGTLKDIHRGASQAVQYWTVTRQTPRKKGDMVFARFGFLAFAQWKDSKLVRLLSTIHVKKSDFIPIPYSKFAAGD--KKEDSWQPLCRFHYNKFMVGVDLADQLNGYYQSLHKSKNYF 1363
            R  E +LN+ WS     G WLS+DEQM+    R    + R+   KPIK G+K WA+ C +GYCF+   DGGF GD KLR  A+CPLGR+ R VL+VL  AC  F+ ++  SG  +AMDNFF+   L  CL    IFAVGTL+    G   A   W        ++GDM+ AR   L   +W DS+ V L+ST HV + ++ P+ Y + AA +  +K  S QPL R  Y K M GVD+ADQ    +   H+   +F
Sbjct:    3 RELEDLLNECWSKLVEPGAWLSYDEQMVKSTARAMFALMRFNKTKPIKTGIKGWAICCPSGYCFVQSIDGGFSGDIKLRPHATCPLGRSARTVLYVLLEACPTFSDKIVGSGITVAMDNFFTGASLVRCLATRDIFAVGTLRGNRTGVDLAKHLWDKEGLKATERGDMLTARSDELVIVKWIDSQEVYLMSTKHVFEDEWAPLAYERRAANNNGEKVSSQQPLARKEYVKNMGGVDVADQRLSAHAHTHRPMTFF 257          
BLAST of mRNA_P-littoralis_Contig1146.10.1 vs. uniprot
Match: A0A6H5KCC7_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCC7_9PHAE)

HSP 1 Score: 210 bits (535), Expect = 3.760e-57
Identity = 135/347 (38.90%), Postives = 182/347 (52.45%), Query Frame = 2
Query:  383 VIGIVLTLGLVRLPEMIDHWDKDVFHDFLLVRNSMSRDMFLLIYSRFFHMAPAPSPKRHR-DGSYDEGWDALWHIRTFETMLNQAWSGACLVGRWLSFDEQMILCVHRTAKFMTRYMPKKPIKNGLKLWAVACFTGYCFLSYTDGGFVGDPKLRGWASCPLGRTCRMVLFVLFGACDEFATQLRQSGTYMAMDNFFSSPILFLCLLWHGIFAVGTLKDIHRGASQAVQYWTVTRQTPRKKGDMVFARFGFLAFAQWKDSKLVRLLSTIHVKKSDFIPIPYSKFAAGDKKEDSWQPLCRFHYNKFMV-GVDLAD-QL-NGYYQSLHKSKNYFWRRVFEQKLMQACSNA 1411
            +IGI +T+GL +   M  HW +    ++ LV+  MSRD+F L+Y RF H +   +P+R   DG  +  +D+  HIR  E +LN AW+     G WLS+DEQMI       K +++Y      + G+KL A    TGYC  S  DGG  GDPKLR +  CPLGRT R VL VL G C     ++  SG ++AMDN+F+SP LF CL  H IFAVGT +      + A  Y     +T   +GDM F R G +A  QW DS  + L+STIHV +    P+   K  AG        PL      K +  GV+L + QL +    +L K +   W       LM  C+ A
Sbjct:   33 MIGIFITMGLTKKVRMRKHWSRSAHDNYPLVQKCMSRDVFELLYCRFLHCSDPNAPERLLPDGEENPDYDSKRHIRELEEILNTAWATNVECGNWLSYDEQMI-------KTVSKY------EQGMKLLAACDITGYCLTSSVDGGMKGDPKLRPYMDCPLGRTTRHVLHVLLGECGVLRQKIDGSGVFIAMDNYFTSPTLFECLASHDIFAVGTCRADRTAGADA--YLESLGRTIPNRGDMNFCRSGQVACVQWADSNDIFLISTIHVAQ----PVK-GKEEAGGIDHFKPLPLSEVKAKKLIARGVELEELQLASTELATLSKVERAVWDEQMATLLMVKCNVA 359          
BLAST of mRNA_P-littoralis_Contig1146.10.1 vs. uniprot
Match: A0A6H5LEE0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LEE0_9PHAE)

HSP 1 Score: 208 bits (530), Expect = 7.930e-54
Identity = 147/398 (36.93%), Postives = 196/398 (49.25%), Query Frame = 2
Query:  755 LKLWAVACFTGYCFLSYTDGGFVGDPKLRGWASCPLGRTCRMVLFVLFGACDEFATQLRQSGTYMAMDNFFSSPILFLCLLWHGIFAVGTLKDIHRGASQAVQYWTVTRQTPRKKGDMVFARFGFLAFAQWKDSKLVRLLSTIHVKK-----------SDFIPIPYSKFAAGDKKE--DSWQPLCRFHYNKFMVGVDLADQLNGYYQSLHKSKNYFWRRVFEQKLMQACSNAWLLYRWWLDDMLAQVKAEIATLNEGGHADGDTAKEGLQLAALLEEQADLERLRKKSRVQWLRALAKHLLSQSTSKLAAKGGRRPAPAPFKKTADRHQHVCNISRRRDCSSPGCKGSPTPKTKAPKRARRAKVSQACFCLSCRSVG---GVVICTPCHADDNQHQAA 1900
            +KL A    T YC  S  DGG  GDPKLR +  CPLGRT R VL VL G C     ++  SG ++AMDN+F+SP LF CL  H IFAVGT +      + A  Y     +T   +GDM F R G +A  QW DSK + L+STIHV +             F P+P S  A G   E  D  QP  R  Y   M+GVDLADQ NG +   HKS   FWRRV++ KL QA +NA+L++R W++ ++ +V+A+   +  GG        E L+LA+      +L  L K  R  W   +A  L+++       KGG+RPA     K AD       +   R C +P CK +                 + C C    + G   GV++C  C      H+ A
Sbjct:  428 MKLLAACDITSYCLTSSVDGGMKGDPKLRPYMDCPLGRTTRHVLHVLLGECGVLRQKIDGSGVFIAMDNYFTSPTLFECLASHDIFAVGTCRADRTAGADA--YLESLGRTIPNRGDMNFCRSGQVACVQWADSKDIFLISTIHVAQPAKGKEEAGGIDHFKPLPLSLRAKGRNGEPLDLQQPYMRMDYVLNMLGVDLADQQNGSHTHDHKSYTNFWRRVYDAKLEQALTNAFLIFRKWVELLIREVEAK-KPIAPGGEL------EELELAS-----TELATLSKVERAVWDEQMATLLMAECNVARPNKGGKRPASD--NKPADPVWGSVTLKSGRLCLNPTCKTTSM---------------KGCSCKQFCTWGDKAGVLMCETCWKSPESHEQA 794          
BLAST of mRNA_P-littoralis_Contig1146.10.1 vs. uniprot
Match: A0A6H5KMJ3_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMJ3_9PHAE)

HSP 1 Score: 194 bits (493), Expect = 3.090e-53
Identity = 98/219 (44.75%), Postives = 130/219 (59.36%), Query Frame = 2
Query:  383 VIGIVLTLGLVRLPEMIDHWDKDVFHDFLLVRNSMSRDMFLLIYSRFFHMAPAPSPKRHR-DGSYDEGWDALWHIRTFETMLNQAWSGACLVGRWLSFDEQMILCVHRTAKFMTRYMPKKPIKNGLKLWAVACFTGYCFLSYTDGGFVGDPKLRGWASCPLGRTCRMVLFVLFGACDEFATQLRQSGTYMAMDNFFSSPILFLCLLWHGIFAVGTLKDI 1036
            +IGI +T+GL +   M  HW +    ++ LV+  M RD+F L+Y RF H +   +P+R   DG  +  +D+ WHIR  E +LN AW+       WLS+DEQMI  V + +  ++ Y P KPIK+G+KL A    T Y   S  DGG  GDPKLR +  CPLGRT R VL VL G C     ++  SG ++AMDN+F+SP LF CL  H IFA    KDI
Sbjct:   33 MIGIFITMGLTKKVRMRKHWSRSAHDNYPLVQKCMPRDVFELLYCRFLHCSDPNAPERLLPDGEENPDYDSKWHIRELEEILNTAWAANVECDNWLSYDEQMIKTVSKYSSKVSFYCPAKPIKHGMKLLAACDITSYSLTSSVDGGMKGDPKLRPYMDCPLGRTTRHVLHVLLGECGVLRQKIDGSGLFIAMDNYFTSPTLFECLASHDIFAWAGSKDI 251          
BLAST of mRNA_P-littoralis_Contig1146.10.1 vs. uniprot
Match: A0A6H5KGW0_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGW0_9PHAE)

HSP 1 Score: 192 bits (488), Expect = 2.690e-52
Identity = 107/262 (40.84%), Postives = 145/262 (55.34%), Query Frame = 2
Query:  722 RYMPKKPIKNGLKLWAVACFTGYCFLSYTDGGFVGDPKLRGWASCPLGRTCRMVLFVLFGACDEFATQLRQSGTYMAMDNFFSSPILFLCLLWHGIFAVGTLKDIHRGASQAVQYWTVTRQTPRKKGDMVFARFGFLAFAQWKDSKLVRLLSTIHVKKSDFIPIPYSKFAAGDK--KEDSWQPLCRFHYNKFMVGVDLADQLNGYYQSLHKSKNYFWRRVFEQKLMQACSNAWLLYRWWLDDMLAQVKAEI-ATLNEGGHAD 1498
            R+   KPIK G+K WA+ C +GYCF+   DGGF  D K+R  A+C LGR+ R VL+VL  AC  F+ ++  SG  +AMDNFF+   +  CL    IFAVGT +    G       W        ++GDM+ AR   L   +W DS+ V L+ST HV + ++ P+ Y + AA +   K  S QPL R  Y K + GVD+ADQ    +   H+   +FW RV +QK  QA SNAWLL+  W   +  Q  A + A   +GG  D
Sbjct:    2 RFNKAKPIKTGIKGWAICCPSGYCFVQSIDGGF-SDIKVRPHATCRLGRSARTVLYVLLEACPTFSDKIVGSGITVAMDNFFTGASVLRCLATRDIFAVGTRRGNRTGVDLVKHLWDKEGLKATERGDMLTARSDELVIVKWIDSQEVYLMSTKHVFEDEWAPLAYERRAANNNGDKVPSHQPLARKEYVKNIGGVDVADQRLSAHAHTHRPMTFFWGRVLDQKFAQAVSNAWLLFFEWAGVLATQCTAALEAATQDGGVGD 262          
BLAST of mRNA_P-littoralis_Contig1146.10.1 vs. uniprot
Match: A0A6H5KCK7_9PHAE (DDE_Tnp_1_7 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCK7_9PHAE)

HSP 1 Score: 192 bits (489), Expect = 4.740e-51
Identity = 146/422 (34.60%), Postives = 199/422 (47.16%), Query Frame = 2
Query:  755 LKLWAVACFTGYCFLSYTDGGFVGDPKLRGWASCPLGRTCRMVLFVLFGACDEFATQLRQSGTYMAMDNFFSSPILFLCLLWHGIFAVGTLKDIHRGASQAVQYWTVTRQTPRKKGDMVFARFGFLAFAQWKDSKLVRLLSTIHV----------KKSD-------FIPIPYSKFA----------------AGD--KKEDSWQPLCRFHYNKFMVGVDLADQLNGYYQSLHKSKNYFWRRVFEQKLMQACSNAWLLYRWWLDDMLAQVKAEIATLNEGGHADGDTAKEGLQLAALLEEQADLERLRKKSRVQWLRALAKHLLSQSTSKLAAKGGRRPAPAPFKKTADRHQHVCNISRRRDCSSPGCKGSPTPKTKAPKRARRAKVSQACFCLSC---RSVG--GVVICTPCHADDNQHQAA 1900
            +KL+A+     YCF+S  DGG  GDPKLR W  CPLGRT R VL VL GAC +F  ++  SG Y+AMDN+F+SP LF CL  H IFAVGT +    G   AV Y     + P ++G+M FAR G +AF QW DSK + L S+IH+          KK D       F P+PY  F                 AG   K  +  QP  R  Y   M GV+ ADQ N  +   HKS    WRRV E K  +  +N  ++++ ++  +  Q    I    +GG  + +  +   +L  +L E   L RL K  R  W   L+  L+++       KGGR   PA      D+     ++  +R C  PGCK               +K S+ C C      +  G  GV++C  C  +  +H  A
Sbjct:    1 MKLFAICDIERYCFVSSVDGGMNGDPKLRVWFDCPLGRTTRHVLHVLLGACKKFGDKIDGSGVYIAMDNYFTSPTLFECLASHDIFAVGTCRSNRTGG--AVPYLQSLDRRPVERGEMHFARAGNVAFVQWLDSKEIILCSSIHIAQPHAAIGEPKKEDSDGGDDHFAPLPYRCFVCPLPSRPHPFMFSLRKAGQAGKSLELQQPWMRKDYVANMGGVETADQQNVSHTHDHKSYTNHWRRVIEGKFERRFTNIVVMFKKYVSLLEDQANKRI----KGGGLELEVVE---KLDRVLVE---LGRLAKMERAVWDEMLSTELMARCNVGRPNKGGR---PAAVTGAPDKVWGSISVKTQRKCMHPGCK---------------SKTSKGCACAELCVGKQAGDRGVLMCQACFNNPVKHARA 392          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1146.10.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KQZ5_9PHAE1.330e-9139.18DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5JW40_9PHAE2.040e-9040.09HTH La-type RNA-binding domain-containing protein ... [more]
A0A6H5JJP9_9PHAE3.030e-8632.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KPD8_9PHAE3.540e-6140.43DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5KG44_9PHAE2.800e-5742.75DDE_Tnp_1_7 domain-containing protein n=2 Tax=Ecto... [more]
A0A6H5KCC7_9PHAE3.760e-5738.90DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5LEE0_9PHAE7.930e-5436.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KMJ3_9PHAE3.090e-5344.75DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5KGW0_9PHAE2.690e-5240.84DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5KCK7_9PHAE4.740e-5134.60DDE_Tnp_1_7 domain-containing protein n=3 Tax=Ecto... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1146contigP-littoralis_Contig1146:42026..45123 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog7955.ENSDARP00000127043
PFAMsDDE_Tnp_1_7,Tnp_zf-ribbon_2
Model size2070
Max annot lvl33154|Opisthokonta
Hectar predicted targeting categoryother localisation
Exons5
Evalue2.28e-27
EggNOG OGs28PUT@1|root,2QWHD@2759|Eukaryota,38EA4@33154|Opisthokonta
DescriptionTransposase IS4
Cds size1821
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1146.10.1prot_P-littoralis_Contig1146.10.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1146 42192..45040 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789467.3968656-UTR-P-littoralis_Contig1146:42025..421911680789467.3968656-UTR-P-littoralis_Contig1146:42025..42191Pylaiella littoralis U1_48UTRP-littoralis_Contig1146 42026..42191 +
1680789467.4650052-UTR-P-littoralis_Contig1146:45040..451231680789467.4650052-UTR-P-littoralis_Contig1146:45040..45123Pylaiella littoralis U1_48UTRP-littoralis_Contig1146 45041..45123 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789467.4115644-CDS-P-littoralis_Contig1146:42191..422631680789467.4115644-CDS-P-littoralis_Contig1146:42191..42263Pylaiella littoralis U1_48CDSP-littoralis_Contig1146 42192..42263 +
1680789467.4243448-CDS-P-littoralis_Contig1146:42498..428661680789467.4243448-CDS-P-littoralis_Contig1146:42498..42866Pylaiella littoralis U1_48CDSP-littoralis_Contig1146 42499..42866 +
1680789467.434984-CDS-P-littoralis_Contig1146:43043..431891680789467.434984-CDS-P-littoralis_Contig1146:43043..43189Pylaiella littoralis U1_48CDSP-littoralis_Contig1146 43044..43189 +
1680789467.4448125-CDS-P-littoralis_Contig1146:43452..439211680789467.4448125-CDS-P-littoralis_Contig1146:43452..43921Pylaiella littoralis U1_48CDSP-littoralis_Contig1146 43453..43921 +
1680789467.454658-CDS-P-littoralis_Contig1146:44274..450401680789467.454658-CDS-P-littoralis_Contig1146:44274..45040Pylaiella littoralis U1_48CDSP-littoralis_Contig1146 44275..45040 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1146.10.1

>prot_P-littoralis_Contig1146.10.1 ID=prot_P-littoralis_Contig1146.10.1|Name=mRNA_P-littoralis_Contig1146.10.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=607bp
MGQLAFDFFTIMFPLMVVNFLVKETNDYQTFCDAPPPEGKEDKREERHKK
KKSTLGHASWPKEGITLGTMYAVIGIVLTLGLVRLPEMIDHWDKDVFHDF
LLVRNSMSRDMFLLIYSRFFHMAPAPSPKRHRDGSYDEGWDALWHIRTFE
TMLNQAWSGACLVGRWLSFDEQMILCVHRTAKFMTRYMPKKPIKNGLKLW
AVACFTGYCFLSYTDGGFVGDPKLRGWASCPLGRTCRMVLFVLFGACDEF
ATQLRQSGTYMAMDNFFSSPILFLCLLWHGIFAVGTLKDIHRGASQAVQY
WTVTRQTPRKKGDMVFARFGFLAFAQWKDSKLVRLLSTIHVKKSDFIPIP
YSKFAAGDKKEDSWQPLCRFHYNKFMVGVDLADQLNGYYQSLHKSKNYFW
RRVFEQKLMQACSNAWLLYRWWLDDMLAQVKAEIATLNEGGHADGDTAKE
GLQLAALLEEQADLERLRKKSRVQWLRALAKHLLSQSTSKLAAKGGRRPA
PAPFKKTADRHQHVCNISRRRDCSSPGCKGSPTPKTKAPKRARRAKVSQA
CFCLSCRSVGGVVICTPCHADDNQHQAAYRKTADRMRTKAAHKRKPLVQK
KRRVTI*
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mRNA from alignment at P-littoralis_Contig1146:42026..45123+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1146.10.1 ID=mRNA_P-littoralis_Contig1146.10.1|Name=mRNA_P-littoralis_Contig1146.10.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3098bp|location=Sequence derived from alignment at P-littoralis_Contig1146:42026..45123+ (Pylaiella littoralis U1_48)
GGGTGGGCCTGGGGGGGACGACACGGGCAAAACGTTTTTTGACTTGCTGC ACAAGAAGGAGGAGAACGGTTGCCCGGAGTCGTTTCGGCCGTCCAAGTCG ACCCTCGAATGTGACCAGTACCCAACTTACGACCCATCTAAACTGGGGCG CTTCAAGGACAAGTGCATGGGGCAGCTAGCGTTCGACTTTTTCACCATCA TGTTCCCGCTGATGGTCGTCAACTTTCTGGTGAAGGAGGTGAGAAATTCC GTGCCCATGTAAATAACAAAGGCAACTGTAATATTTATATATTGTGCTGT AACTTCGCACGCGGGCGAAACATACAGCGATGGAGTACCGAGGGCTAGCA CGGAGAAAACAAAGATGCAACACTTATCTCCCCATGCACCCGTTTCCCGT GTAGTAGAACGAATCGGGGCTAACAACATGACGTTATCGCTGCATCATCC CGCCCCCTGTCTCCCCAACACAGACGAACGACTACCAAACGTTCTGTGAT GCACCTCCACCTGAAGGTAAAGAGGACAAGCGTGAAGAGCGGCACAAGAA GAAGAAATCGACACTGGGTCATGCGTCGTGGCCTAAGGAGGGCATTACGT TGGGCACAATGTACGCCGTCATTGGCATCGTGTTGACGCTGGGGCTTGTG AGGCTCCCGGAGATGATCGACCACTGGGACAAGGACGTCTTCCACGATTT CCTGTTGGTCCGGAACAGCATGTCTCGAGACATGTTCCTCCTCATCTACA GTCGTTTTTTCCACATGGCACCCGCTCCCTCTCCAAAGAGACACAGGGAT GGTTCCTACGACGAAGGTTGGGATGCCTTGTGGCATATTCGGTGAGAAGG CCATCAGTACGTGTGGGGAAGTCGTGCGAGAGAGCCACATGCTAACCGTC CGATGAACCTGTGGTCGTGAATTTGAATAAACCCACCCTCTCACGACGAA CCCTCCATCCCGCCCCACCCCTACCCCCTCGGACTATGTGTATCGAAACT CTACTTGACGGCTGACAGGACGTTCGAGACGATGCTGAACCAGGCGTGGA GCGGGGCGTGCTTAGTGGGTCGGTGGCTATCTTTCGACGAGCAAATGATC TTGTGCGTTCATCGCACTGCCAAGTTCATGACGCGGTACATGCCGAAAAA ACCAATCAAGAATGGTAGGTGATTAATAACGTGGGTGTTATGTGGGTGTT ATTCTTTGGCGTTGGCGGGTTTTTTCATGGACATGTTTGCCTCATGCTAT GTATGACCAGCTGGTATCCTAATCTTGCGTGCCACAACCATAAGAGTGTT ATTGGCTGTCAACTGGTACCAGCCACATGAGCGACTTTACAAACGGGGCG AGTACGCCGTCTATCACAACAACCACGCCCGGCTTGTCTCTCGCGCGCTC GCGCGCTCGTGTGTTTTTTCTACCCAGGGCTAAAATTGTGGGCCGTGGCC TGTTTCACGGGATACTGCTTTCTTAGTTACACGGACGGAGGTTTCGTCGG AGACCCAAAGCTTCGGGGCTGGGCTTCATGCCCGCTCGGCCGCACGTGCC GGATGGTCTTGTTCGTGTTGTTTGGTGCTTGTGACGAGTTCGCCACGCAG CTGCGCCAATCTGGCACCTACATGGCCATGGACAATTTTTTCTCCTCGCC CATCCTCTTCTTGTGTCTACTTTGGCACGGGATTTTCGCTGTGGGCACAC TGAAGGACATCCATAGGGGAGCTAGCCAAGCGGTGCAGTACTGGACCGTA ACTAGGCAGACCCCGAGGAAGAAGGGCGACATGGTGTTTGCTAGATTCGG GTTTTTGGCCTTCGCCCAGTGGAAGGACTCCAAGCTTGTTCGGCTCCTCT CCACCATCCACGTCAAGAAATCAGACTTCATCCCAATCCCCTACAGGTGA GGTTAGGCACTTGGTTGTACATAAGTACGGGTGTCCCTCATTTTTTAACA TGTCGCAAAATTTCGGGCTCAGCTGGCATTGGTTGTTGTCGGTCCCCGGC CATACTAACCTGGCCTTGCCTTTGCCATGAACCTGACGAGGTGTTACGTA TTATTTTAAGGTGACCCGAATCCGAATTCACTTCAGTCCTCCTCCACAGG CGTGACCTTCAGTTAGCATTTGACGCTCGAACGACGATCGTCCCACCTAA TCCCCCCCCCCCCTCTCCCACCCGTCGTACCCTATGCCTTCCACCACCAC CCCCATCTCCCCCCCCCTCACCTTCCGTGTGTTTTCTTTGCTTTCGCAGT AAGTTTGCGGCGGGAGACAAGAAAGAGGACTCGTGGCAGCCACTGTGTCG ATTCCATTACAACAAGTTCATGGTCGGGGTTGACCTAGCCGACCAACTCA ACGGCTACTACCAGAGTCTCCACAAGTCCAAGAACTACTTTTGGAGGCGC GTCTTCGAGCAGAAGCTCATGCAAGCCTGCTCAAACGCTTGGTTGCTTTA CAGGTGGTGGCTCGACGACATGCTGGCACAAGTAAAAGCAGAGATTGCCA CGTTGAACGAAGGCGGCCACGCGGACGGGGACACAGCCAAGGAGGGGTTG CAGCTTGCAGCTCTCTTGGAGGAGCAGGCAGACTTGGAGAGACTCCGAAA GAAGTCGCGAGTGCAGTGGTTGCGAGCTTTGGCCAAGCACCTCCTTTCTC AGTCGACCTCGAAGCTCGCGGCGAAGGGGGGGCGGCGCCCGGCACCTGCA CCGTTCAAGAAGACTGCCGATCGCCACCAGCACGTCTGCAACATCAGCCG ACGGCGGGACTGCTCCTCCCCGGGATGCAAGGGGAGCCCTACCCCGAAGA CCAAAGCCCCGAAACGCGCCCGCAGGGCGAAGGTTTCCCAAGCATGCTTT TGCCTGTCATGCAGGAGCGTGGGTGGCGTCGTCATCTGCACGCCCTGCCA CGCTGATGACAACCAGCACCAGGCAGCGTACCGAAAAACCGCCGACCGCA TGCGCACTAAAGCAGCACACAAGCGGAAGCCCTTGGTGCAGAAGAAGCGG AGAGTCACTATCTAAGATCGGAGCTATGGGTGGGGTGGGGGTTATACACC ACGTCGTGGGAGTTATCTCCAGGGTGGCTCACTTGCTGGAGGACAACG
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Coding sequence (CDS) from alignment at P-littoralis_Contig1146:42026..45123+

>mRNA_P-littoralis_Contig1146.10.1 ID=mRNA_P-littoralis_Contig1146.10.1|Name=mRNA_P-littoralis_Contig1146.10.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1821bp|location=Sequence derived from alignment at P-littoralis_Contig1146:42026..45123+ (Pylaiella littoralis U1_48)
ATGGGGCAGCTAGCGTTCGACTTTTTCACCATCATGTTCCCGCTGATGGT
CGTCAACTTTCTGGTGAAGGAGACGAACGACTACCAAACGTTCTGTGATG
CACCTCCACCTGAAGGTAAAGAGGACAAGCGTGAAGAGCGGCACAAGAAG
AAGAAATCGACACTGGGTCATGCGTCGTGGCCTAAGGAGGGCATTACGTT
GGGCACAATGTACGCCGTCATTGGCATCGTGTTGACGCTGGGGCTTGTGA
GGCTCCCGGAGATGATCGACCACTGGGACAAGGACGTCTTCCACGATTTC
CTGTTGGTCCGGAACAGCATGTCTCGAGACATGTTCCTCCTCATCTACAG
TCGTTTTTTCCACATGGCACCCGCTCCCTCTCCAAAGAGACACAGGGATG
GTTCCTACGACGAAGGTTGGGATGCCTTGTGGCATATTCGGACGTTCGAG
ACGATGCTGAACCAGGCGTGGAGCGGGGCGTGCTTAGTGGGTCGGTGGCT
ATCTTTCGACGAGCAAATGATCTTGTGCGTTCATCGCACTGCCAAGTTCA
TGACGCGGTACATGCCGAAAAAACCAATCAAGAATGGGCTAAAATTGTGG
GCCGTGGCCTGTTTCACGGGATACTGCTTTCTTAGTTACACGGACGGAGG
TTTCGTCGGAGACCCAAAGCTTCGGGGCTGGGCTTCATGCCCGCTCGGCC
GCACGTGCCGGATGGTCTTGTTCGTGTTGTTTGGTGCTTGTGACGAGTTC
GCCACGCAGCTGCGCCAATCTGGCACCTACATGGCCATGGACAATTTTTT
CTCCTCGCCCATCCTCTTCTTGTGTCTACTTTGGCACGGGATTTTCGCTG
TGGGCACACTGAAGGACATCCATAGGGGAGCTAGCCAAGCGGTGCAGTAC
TGGACCGTAACTAGGCAGACCCCGAGGAAGAAGGGCGACATGGTGTTTGC
TAGATTCGGGTTTTTGGCCTTCGCCCAGTGGAAGGACTCCAAGCTTGTTC
GGCTCCTCTCCACCATCCACGTCAAGAAATCAGACTTCATCCCAATCCCC
TACAGTAAGTTTGCGGCGGGAGACAAGAAAGAGGACTCGTGGCAGCCACT
GTGTCGATTCCATTACAACAAGTTCATGGTCGGGGTTGACCTAGCCGACC
AACTCAACGGCTACTACCAGAGTCTCCACAAGTCCAAGAACTACTTTTGG
AGGCGCGTCTTCGAGCAGAAGCTCATGCAAGCCTGCTCAAACGCTTGGTT
GCTTTACAGGTGGTGGCTCGACGACATGCTGGCACAAGTAAAAGCAGAGA
TTGCCACGTTGAACGAAGGCGGCCACGCGGACGGGGACACAGCCAAGGAG
GGGTTGCAGCTTGCAGCTCTCTTGGAGGAGCAGGCAGACTTGGAGAGACT
CCGAAAGAAGTCGCGAGTGCAGTGGTTGCGAGCTTTGGCCAAGCACCTCC
TTTCTCAGTCGACCTCGAAGCTCGCGGCGAAGGGGGGGCGGCGCCCGGCA
CCTGCACCGTTCAAGAAGACTGCCGATCGCCACCAGCACGTCTGCAACAT
CAGCCGACGGCGGGACTGCTCCTCCCCGGGATGCAAGGGGAGCCCTACCC
CGAAGACCAAAGCCCCGAAACGCGCCCGCAGGGCGAAGGTTTCCCAAGCA
TGCTTTTGCCTGTCATGCAGGAGCGTGGGTGGCGTCGTCATCTGCACGCC
CTGCCACGCTGATGACAACCAGCACCAGGCAGCGTACCGAAAAACCGCCG
ACCGCATGCGCACTAAAGCAGCACACAAGCGGAAGCCCTTGGTGCAGAAG
AAGCGGAGAGTCACTATCTAA
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