prot_P-littoralis_Contig1130.4.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig1130.4.1
Unique Name	prot_P-littoralis_Contig1130.4.1
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	91

Homology

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BLAST of mRNA_P-littoralis_Contig1130.4.1 vs. uniprot
Match: A0A6H5KIS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIS6_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 1.300e-18
Identity = 47/91 (51.65%), Postives = 55/91 (60.44%), Query Frame = 0

Query:    3 IGSNRRYASPPNRRGIAYLP------------GQTGHLRQFVEQYGVICAPLTDILRNKAFASKRARKCPIPWGEAADEAFNSIRSALASP 81
            I S   Y +P     IA +P            G TG+LRQFV  Y +  APLT+ILRNKAFASKRARK PIPW  A ++AF S+R  LASP
Sbjct:  218 IDSTGLYPAPSKLDAIARMPRPHTVEELRTFLGLTGYLRQFVPNYSLTAAPLTNILRNKAFASKRARKLPIPWSVAEEDAFQSLRETLASP 308

[Close]

BLAST of mRNA_P-littoralis_Contig1130.4.1 vs. uniprot
Match: A0A6H5K9Z4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9Z4_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 1.470e-18
Identity = 47/91 (51.65%), Postives = 55/91 (60.44%), Query Frame = 0

Query:    3 IGSNRRYASPPNRRGIAYLP------------GQTGHLRQFVEQYGVICAPLTDILRNKAFASKRARKCPIPWGEAADEAFNSIRSALASP 81
            I S   Y +P     IA +P            G TG+LRQFV  Y +  APLT+ILRNKAFASKRARK PIPW  A ++AF S+R  LASP
Sbjct:  174 IDSTGLYPAPSKLDAIARMPRPHTVEELRTFLGLTGYLRQFVPNYSLTAAPLTNILRNKAFASKRARKLPIPWSVAEEDAFQSLRETLASP 264

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BLAST of mRNA_P-littoralis_Contig1130.4.1 vs. uniprot
Match: A0A6H5JQV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQV6_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 1.540e-18
Identity = 47/91 (51.65%), Postives = 55/91 (60.44%), Query Frame = 0

Query:    3 IGSNRRYASPPNRRGIAYLP------------GQTGHLRQFVEQYGVICAPLTDILRNKAFASKRARKCPIPWGEAADEAFNSIRSALASP 81
            I S   Y +P     IA +P            G TG+LRQFV  Y +  APLT+ILRNKAFASKRARK PIPW  A ++AF S+R  LASP
Sbjct:  358 IDSTGLYPAPSKLDAIARMPRPHTVEELRTFLGLTGYLRQFVPNYSLTAAPLTNILRNKAFASKRARKLPIPWSVAEEDAFQSLRETLASP 448

[Close]

BLAST of mRNA_P-littoralis_Contig1130.4.1 vs. uniprot
Match: A0A6H5KFK7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFK7_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 1.560e-18
Identity = 47/91 (51.65%), Postives = 55/91 (60.44%), Query Frame = 0

Query:    3 IGSNRRYASPPNRRGIAYLP------------GQTGHLRQFVEQYGVICAPLTDILRNKAFASKRARKCPIPWGEAADEAFNSIRSALASP 81
            I S   Y +P     IA +P            G TG+LRQFV  Y +  APLT+ILRNKAFASKRARK PIPW  A ++AF S+R  LASP
Sbjct:  360 IDSTGLYPAPSKLDAIARMPRPHTVEELRTFLGLTGYLRQFVPNYSLTAAPLTNILRNKAFASKRARKLPIPWSVAEEDAFQSLRETLASP 450

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BLAST of mRNA_P-littoralis_Contig1130.4.1 vs. uniprot
Match: A0A6H5KEH2_9PHAE (RNA-directed DNA polymerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEH2_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 1.590e-18
Identity = 47/91 (51.65%), Postives = 55/91 (60.44%), Query Frame = 0

Query:    3 IGSNRRYASPPNRRGIAYLP------------GQTGHLRQFVEQYGVICAPLTDILRNKAFASKRARKCPIPWGEAADEAFNSIRSALASP 81
            I S   Y +P     IA +P            G TG+LRQFV  Y +  APLT+ILRNKAFASKRARK PIPW  A ++AF S+R  LASP
Sbjct:  882 IDSTGLYPAPSKLDAIARMPRPHTVEELRTFLGLTGYLRQFVPNYSLTAAPLTNILRNKAFASKRARKLPIPWSVAEEDAFQSLRETLASP 972

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BLAST of mRNA_P-littoralis_Contig1130.4.1 vs. uniprot
Match: A0A6H5LDH3_9PHAE (RT_RNaseH_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDH3_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 5.430e-18
Identity = 46/91 (50.55%), Postives = 54/91 (59.34%), Query Frame = 0

Query:    3 IGSNRRYASPPNRRGIAYLP------------GQTGHLRQFVEQYGVICAPLTDILRNKAFASKRARKCPIPWGEAADEAFNSIRSALASP 81
            I S   Y +P     IA +P            G TG+LRQFV  Y +  APLT+ILR KAFASKRARK PIPW  A ++AF S+R  LASP
Sbjct:  505 IDSTGLYPAPSKLDAIARMPRPHTVEELRTLLGLTGYLRQFVPNYSLTAAPLTNILRKKAFASKRARKLPIPWSAAGEDAFQSLRDTLASP 595

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BLAST of mRNA_P-littoralis_Contig1130.4.1 vs. uniprot
Match: A0A6H5J659_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J659_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 1.370e-17
Identity = 46/91 (50.55%), Postives = 54/91 (59.34%), Query Frame = 0

Query:    3 IGSNRRYASPPNRRGIAYLP------------GQTGHLRQFVEQYGVICAPLTDILRNKAFASKRARKCPIPWGEAADEAFNSIRSALASP 81
            I S   Y +P     IA +P            G TG+LRQFV  Y +  APLT+ILRNKA ASKRARK PIPW  A ++AF S+R  LASP
Sbjct:  400 IDSTGLYPAPSKLDAIARMPRPHTVEELRTFLGLTGYLRQFVPNYSLTAAPLTNILRNKAVASKRARKLPIPWSVAEEDAFQSLRETLASP 490

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BLAST of mRNA_P-littoralis_Contig1130.4.1 vs. uniprot
Match: A0A6H5JB61_9PHAE (RT_RNaseH_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB61_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 1.830e-17
Identity = 41/71 (57.75%), Postives = 48/71 (67.61%), Query Frame = 0

Query:   12 PPNRRGIAYLPGQTGHLRQFVEQYGVICAPLTDILRNKAFASKRARKCPIPWGEAADEAFNSIRSALASPT 82
            P    G+    G T +LRQFV QY ++ APLT ILRNK FASKRARK PI W EA + AF+ +R  LASPT
Sbjct:   78 PRTVEGLRTFLGLTAYLRQFVPQYSLVSAPLTGILRNKDFASKRARKLPIQWEEAEEHAFHQLRQCLASPT 148

[Close]

BLAST of mRNA_P-littoralis_Contig1130.4.1 vs. uniprot
Match: A0A6H5K5Z9_9PHAE (RT_RNaseH_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5Z9_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 4.000e-17
Identity = 44/91 (48.35%), Postives = 52/91 (57.14%), Query Frame = 0

Query:    3 IGSNRRYASPPNRRGIAYLP------------GQTGHLRQFVEQYGVICAPLTDILRNKAFASKRARKCPIPWGEAADEAFNSIRSALASP 81
            I S   Y +P     I  +P            G TG+LRQ +    +  APLT+ILRNKAFASKRARK PIPW  A D+AF S+R  LASP
Sbjct:  117 IDSTGLYPAPSKLDAITRMPRPHTVQELHTFLGLTGYLRQLIPNCSLTAAPLTNILRNKAFASKRARKLPIPWSAAEDDAFQSLRETLASP 207

[Close]

BLAST of mRNA_P-littoralis_Contig1130.4.1 vs. uniprot
Match: A0A6H5JZ05_9PHAE (RT_RNaseH_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ05_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 5.760e-17
Identity = 43/91 (47.25%), Postives = 53/91 (58.24%), Query Frame = 0

Query:    3 IGSNRRYASPPNRRGIAYLP------------GQTGHLRQFVEQYGVICAPLTDILRNKAFASKRARKCPIPWGEAADEAFNSIRSALASP 81
            I S   Y +P     IA +P            G  G +RQF+  + +  APLT+ILRNKAFASKRARK PIPW  A ++AF S+R  LASP
Sbjct:    3 IDSTGLYPAPSKLDAIARMPRPHTVEALRTFLGLAGCVRQFLPNFSLTAAPLTNILRNKAFASKRARKLPIPWPAAEEDAFQSLRETLASP 93

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig1130.4.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig1130.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KIS6_9PHAE	1.300e-18	51.65	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K9Z4_9PHAE	1.470e-18	51.65	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JQV6_9PHAE	1.540e-18	51.65	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KFK7_9PHAE	1.560e-18	51.65	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5KEH2_9PHAE	1.590e-18	51.65	RNA-directed DNA polymerase n=1 Tax=Ectocarpus sp....	[more]
A0A6H5LDH3_9PHAE	5.430e-18	50.55	RT_RNaseH_2 domain-containing protein n=1 Tax=Ecto...	[more]
A0A6H5J659_9PHAE	1.370e-17	50.55	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JB61_9PHAE	1.830e-17	57.75	RT_RNaseH_2 domain-containing protein n=1 Tax=Ecto...	[more]
A0A6H5K5Z9_9PHAE	4.000e-17	48.35	RT_RNaseH_2 domain-containing protein n=1 Tax=Ecto...	[more]
A0A6H5JZ05_9PHAE	5.760e-17	47.25	RT_RNaseH_2 domain-containing protein n=1 Tax=Ecto...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 5..89 e-value: 7.9E-10 score: 40.6
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 7..86

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig1130	contig	P-littoralis_Contig1130:52075..52347 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig1130.4.1	mRNA_P-littoralis_Contig1130.4.1	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig1130 52075..52347 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig1130.4.1 ID=prot_P-littoralis_Contig1130.4.1|Name=mRNA_P-littoralis_Contig1130.4.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=91bp
VQIGSNRRYASPPNRRGIAYLPGQTGHLRQFVEQYGVICAPLTDILRNKA
FASKRARKCPIPWGEAADEAFNSIRSALASPTYFKKFKPK*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR043128	Rev_trsase/Diguanyl_cyclase
IPR043502	DNA/RNA_pol_sf