prot_P-littoralis_Contig113.111.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig113.111.1
Unique Nameprot_P-littoralis_Contig113.111.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length425
Homology
BLAST of mRNA_P-littoralis_Contig113.111.1 vs. uniprot
Match: A0A6H5KET6_9PHAE (UV excision repair protein RAD23 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KET6_9PHAE)

HSP 1 Score: 362 bits (929), Expect = 4.080e-119
Identity = 334/427 (78.22%), Postives = 365/427 (85.48%), Query Frame = 0
Query:    1 MSRSLLVKTLKGESFRIDVPEESLMSDVKTKISEVRGDEPSSQVLICGGKTLKDNDPLATTVTAGGFLVLMVKKVCN--SSVSPAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPXXXXXXXXXXXXXXXXXXXXXXXXPAAMNDGMAIDPASVELLTAMGFPEDQARAALRAAFNDVSRAASYLMEGIPDNVGAGAGVEGSAGLXXXXXXXXXXXXXXXXXXXXXXXXXXVGESELAEALMGMQGAGEGNPLNFMRFHPQFEQLRQLVRENPAVLPQVLQGLATQSPELIERINQHPDDFLRLMNEPPDAEGQAMMDLGAEGFIEEMEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQDGQ-VTVELTEEEGVAVESLMAMVPGVPRDRVIEAFIACDKNAEMAANLLFENAL 424
            M+RSL VKTLKGE FRIDV EES+MSDVK KI+EVRG +P++QVLICGGKTLKD D LA +V AGGFLVLMVK+  N  ++ +P PA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      XXXXXXXXXXXXXXXXXXXX    N+ +++DP +V++LTAMGFP DQA AALRAAFNDVSRAASYLMEGIP N GAG G  G A  XXXXXXXXXXXXXXXXXXXX XXXX  G   LA+ALMGM+ AGEGNPLNFMRFHPQF++LR LVRENPA+LPQVLQ LATQSPELI RINQHPD FLRLMNEPPDAEGQA+M++G EG +E M+  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   Q VTVELTEEE  AV++LMAMVPG  RD+VIEAFIACDKNAEMAANLLFENAL
Sbjct:    1 MTRSLTVKTLKGEVFRIDVAEESVMSDVKAKIAEVRGHDPATQVLICGGKTLKDGDSLADSVAAGGFLVLMVKRRANPVANAAPTPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------XXXXXXXXXXXXXXXXXXXXAGGANETLSVDPTNVDMLTAMGFPADQATAALRAAFNDVSRAASYLMEGIPHNAGAGTG-GGDARXXXXXXXXXXXXXXXXXXXXXEXXXXAAG---LAQALMGME-AGEGNPLNFMRFHPQFDELRGLVRENPAMLPQVLQALATQSPELIGRINQHPDAFLRLMNEPPDAEGQAIMEMGVEGLLEGMDQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQTVTVELTEEEDAAVQNLMAMVPGAGRDQVIEAFIACDKNAEMAANLLFENAL 416          
BLAST of mRNA_P-littoralis_Contig113.111.1 vs. uniprot
Match: A0A836CLA0_9STRA (UV excision repair protein RAD23 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLA0_9STRA)

HSP 1 Score: 147 bits (372), Expect = 2.110e-38
Identity = 99/267 (37.08%), Postives = 136/267 (50.94%), Query Frame = 0
Query:  166 MGFPEDQARAALRAAFNDVSRAASYLMEGIPD-----------NVGAGAGVEGSAGLXXXXXXXXXXXXXXXXXXXXXXXXXXVGESELAEALMGMQGAGEGNPLNFMRFHPQFEQLRQLVRENPAVLPQVLQGLATQSPELIERINQHPDDFLRLMNEPPDAEGQAMMDLGAEGFIEEMEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQDGQVTVELTEEEGVAVESLMAMVPGVPRDRVIEAFIACDKNAEMAANLLFE 421
            MGFPEDQ RAAL+AAFN++  AA+YLM G+PD           N+   +GV G+ G+                          +G+++  EA  G +G    NPL  +R+HPQF +LR+LV+ NPA LP+++QG+  QSPEL+  IN HP  F++LMN   D       DLG EG +E +                                    D   T  LT E+  AV+ LMA+VP + R RVIEA+++CDKN E A N+LF+
Sbjct:    1 MGFPEDQVRAALQAAFNNLEVAANYLMTGLPDFAAPDFEAHQPNIET-SGVGGTVGIVPADILSGPMGDT-------------LGDADDMEAAQGFEGGA--NPLAALRYHPQFLELRELVQSNPAALPEIIQGIGEQSPELLNMINAHPQAFVQLMNSTGD-------DLGMEGDLEGV-------------------LGDEEGEQQESMDAGGSDQAPTAALTAEDNAAVDQLMAIVPNMSRQRVIEAYLSCDKNVEYAMNMLFD 225          
BLAST of mRNA_P-littoralis_Contig113.111.1 vs. uniprot
Match: A0A1Y1XXG2_9FUNG (UV excision repair protein RAD23 n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1XXG2_9FUNG)

HSP 1 Score: 123 bits (308), Expect = 8.740e-28
Identity = 159/423 (37.59%), Postives = 213/423 (50.35%), Query Frame = 0
Query:    7 VKTLKGESFRIDVPEESLMSDVKTKISEVRGDEPSSQVLICGGKTLKDNDPLAT-TVTAGGFLVLMVKKVCNSSV---SPAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPXXXXXXXXXXXXXXXXXXXXXXXXPAAMNDGMAIDP---ASVELLTAMGFPEDQARAALRAAFNDVSRAASYLMEGIPDNVGAGAGVEGSAGLXXXXXXXXXXXXXXXXXXXXXXXXXXVGESELAEALMGMQGAGEGNPLNFMRFHPQFEQLRQLVRENPAVLPQVLQGLATQSPELIERINQHPDDFLRLMNEPPDAEGQAMMDLGAEGFIEEMEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQDGQVTVELTEEEGVAVESLMAMVPGVPRDRVIEAFIACDKNAEMAANLLFEN 422
            +KTL+ ++F+IDV  E  +S +K KI + +G + S Q LI  GK L D+  +A+  VT   F+V+MV K   S     SPAPA        XXXXXXXXXXXXXXXXXXXXXXXXXX  XXXXXXXXXXXXXX               +G+   P   A++  +  MGF  +Q   ALRA+FN+  RA  YLM GIP+++     +  +                               +    E     Q  G G  L+F+R  PQF+QLRQLV++NPA+L  +LQ L   +P+L++ IN + D FL+L++E            G EG                                   XX     G  T+++T+EE  A+E L  +  G  R RVIEA+ ACDKN E+AAN LF++
Sbjct:    5 IKTLQQKAFQIDVEPEDKISTLKEKIEQSQGHQVSHQKLIFSGKILNDDQTVASCNVTEKDFMVVMVSKPKASPAAAKSPAPATPAVTAPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGWES--------GNGLVTGPEYEAAINNMIEMGFEREQVTKALRASFNNPERAVEYLMNGIPEHL-----LGNTQQPAQQEAHTPSQVPASPASGQPQNLFTAAAQQAAQERGAQPQATGGGGDLSFLRSQPQFQQLRQLVQQNPALLQPLLQQLGQANPQLLQLINANQDTFLQLLSEA-----------GGEGXX---------------------------------XXDGIPPGAHTIQVTQEEKEAIERLCGL--GFDRARVIEAYFACDKNEELAANYLFDH 368          
BLAST of mRNA_P-littoralis_Contig113.111.1 vs. uniprot
Match: A0A225X0I0_9STRA (UV excision repair protein RAD23 n=13 Tax=Phytophthora TaxID=4783 RepID=A0A225X0I0_9STRA)

HSP 1 Score: 122 bits (305), Expect = 7.440e-27
Identity = 191/470 (40.64%), Postives = 232/470 (49.36%), Query Frame = 0
Query:    5 LLVKTLKGESFRIDVPEESLMSDVKTKISEVRGDEPSSQVLICGGKTLKDNDPLAT-TVTAGGFLVLMVKKVCNSSVSPAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPXXXXXXXXXXXXXXXXXXXXXXXXPAAMNDGMAIDP---ASVELLTAMGFPEDQARAALRAAFNDVSRAASYLMEGIPDNVGAGA-----GVEGSAGLXXXXXXXXXXXXXXXXXXXXXXXXXXVGESELAEALMGMQGAGEGNPLNFMRFHPQFEQLRQLVRENPAVLPQVLQGLATQSPELIERINQHPDDFLRLMNEP---------PDAEGQAMMDLGAEG------------FIEEMEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ----------------------DGQVTVELTEEEGVAVESLMAMVPGVPRDRVIEAFIACDKNAEMAANLLFEN 422
            L VKTL+G +F +D      +S VK +I E++    S Q LI  GK LKD+  LA   V    FLV+MV K      + A  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  XXXXXXXXXXXXXXXXXXXXXXXX      G+       A+V+ L  MGFPEDQ R+ALRAAFN+  RA  YLM GIP+   A A       EG AG                              +  A A+ G     E N L  +R HPQF+ LRQLV+ NPA LP VLQ +  QSPEL+  I+Q+ D F++++NEP         P   G A  DLG  G             ++ +                                   Q                      DG   + L+EEE  AV+ L  M  G  R  VI+A++ACDKN  +AAN L ++
Sbjct:    3 LTVKTLQGVAFSLDAELTDAVSAVKQRIEEIQKFPVSQQKLIHAGKVLKDDSTLAEYNVKENDFLVVMVTKPKAPKPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGLVAGEQMSATVQQLVDMGFPEDQVRSALRAAFNNPERAVEYLMTGIPEQAVAPAQTAAPSAEGGAGA----------------------------SAATATAVTG----DEANTLEALRNHPQFDALRQLVQSNPAALPAVLQQIGAQSPELLRLIHQNQDRFVQMLNEPIGTRDAGATPSGAGAAPFDLGMGGGGAMPTPQQIQQLVDSLTPEQQAQMAAQMGMTPEQLRGLSQMLSNLPPGAMEQMMASMGGGGGLEGLGGGAGAGADGH-RIMLSEEEAAAVDRLCEM--GFERTDVIQAYLACDKNEALAANFLMDS 437          
BLAST of mRNA_P-littoralis_Contig113.111.1 vs. uniprot
Match: A0A0C3DUV6_9PEZI (UV excision repair protein RAD23 n=1 Tax=Oidiodendron maius Zn TaxID=913774 RepID=A0A0C3DUV6_9PEZI)

HSP 1 Score: 119 bits (297), Expect = 2.710e-26
Identity = 143/424 (33.73%), Postives = 202/424 (47.64%), Query Frame = 0
Query:    5 LLVKTLKGESFRIDVPEESLMSDVKTKISEVRGDEPSSQVLICGGKTLKDNDPLAT-TVTAGGFLVLMVKKVCNSSVSPAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPXXXXXXXXXXXXXXXXXXXXXXXXPA-AMNDGMAIDP---ASVELLTAMGFPEDQARAALRAAFNDVSRAASYLMEGIPDNVGAGAGVEGSAGLXXXXXXXXXXXXXXXXXXXXXXXXXXVGESELAE--ALMGMQGAGEGNPLNFMRFHPQFEQLRQLVRENPAVLPQVLQGLATQSPELIERINQHPDDFLRLMNEPPDAEGQAMMDLGAEGFIEEMEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQDGQVTVELTEEEGVAVESLMAMVPGVPRDRVIEAFIACDKNAEMAANLLFE 421
            L  K LK + F I+     L+SDVK KI++ +G E S Q LI  GK L+D++ + +  +   GF+V M+ K   S+ +P+P+              XXXXXXXXX         XX           XXXXXXXXXXXXXXXPA + + G+A+     A +  +  MGF   Q   A+RAAF +  RA  YL+ GIP+N+   A     A                             G   +A   A  G    G GN L+F+R +PQF+QLRQ+V++NP +L  +LQ +   +P+L + I QHP+ FL+L++E  D +  A +  GA+                                               + +TEEE  A+E L ++  G PRD+ I+A+ ACDKN E+AAN LFE
Sbjct:    3 LTFKDLKQQKFVIEAEPSELISDVKEKIAKEKGWEASQQKLIYSGKILQDSNTVESYKIEEKGFIVCMISKP-KSAPAPSPSTSKPPATPAPATVSXXXXXXXXXQSNIFAGGAXX-----------XXXXXXXXXXXXXXXPAFSESSGLAMGAERAAQIAEMENMGFERSQIELAMRAAFFNSDRAIEYLLTGIPENLQHEARPAAPAQAATPAAAANPEGGDESVNLFEAAAQAGTGGRGVAARAAAGGAPAGGLGN-LDFLRNNPQFQQLRQVVQQNPQMLEPILQQVGAGNPQLAQLIGQHPEQFLQLLSE--DGDNDAPLPPGAQA----------------------------------------------ISVTEEEREAIERLCSL--GFPRDQAIQAYFACDKNEELAANFLFE 363          
BLAST of mRNA_P-littoralis_Contig113.111.1 vs. uniprot
Match: A0A6G0WDE9_9STRA (UV excision repair protein RAD23 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WDE9_9STRA)

HSP 1 Score: 118 bits (295), Expect = 9.260e-26
Identity = 167/451 (37.03%), Postives = 211/451 (46.78%), Query Frame = 0
Query:    5 LLVKTLKGESFRIDVPEESLMSDVKTKISEVRGDEPSSQVLICGGKTLKDNDPLAT-TVTAGGFLVLMVKK---VCNSSVSPAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPXXXXXXXXXXXXXXXXXXXXXXXXPAAMNDGMAIDPA---SVELLTAMGFPEDQARAALRAAFNDVSRAASYLMEGIPDNVGAGAGVEGSAGLXXXXXXXXXXXXXXXXXXXXXXXXXXVGESELAEALMGMQGAGEGNPLNFMRFHPQFEQLRQLVRENPAVLPQVLQGLATQSPELIERINQHPDDFLRLMNEP------PDAEGQAMMDLGAEGF------------IEEMEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQDGQV--------TVELTEEEGVAVESLMAMVPGVPRDRVIEAFIACDKNAEMAANLLFEN 422
            L VKTL+G +  I+   E  +  VK K+  V G    +Q LI  GK LKD   LA   +    FLV+MV K   V      P PA    XXXXXXXXXXXXXXXXXXXXXXXXXXXXX                           PAA  +G+ +  A   ++  L  MGFPE+Q R AL+AAFN+  RA  YLM GIP+   A                                       +    A  G  G G  N L  +R HPQF+ LR+L++ NPA LP VLQ + +QSPEL+  I+ + ++F+R++NEP      P A      D  A G             +   +                XXXXXXXXXXXXXX    Q+ Q          + LTEEE  AV  L  M  G  R+ VI+A++ACDKN  +AAN L ++
Sbjct:    3 LTVKTLQGVAHAIEAELEDTVLSVKHKVEAVNGAAVENQKLIHAGKVLKDESKLAEYNIKENDFLVVMVTKPKVVRKPPTEPTPAPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA-------------------------TPAAGAEGLVVGEALNDTIRQLCDMGFPEEQVRVALQAAFNNPDRAVEYLMNGIPEQPAAPP-------------------------------------ASAPAAASG--GLGAPNSLEALRSHPQFDALRRLIQSNPAALPTVLQQIGSQSPELLRLIHANQEEFVRMLNEPIAESAAPAAGASPFGDADAGGMPSPQQLQQLMASLSPQQQAAMAAQMGMTPDQLQXXXXXXXXXXXXXXAQMMQNMQAGGGVGAPTRIHLTEEEAAAVGRLCDM--GFDRNEVIQAYLACDKNEALAANFLMDS 387          
BLAST of mRNA_P-littoralis_Contig113.111.1 vs. uniprot
Match: L8GWS2_ACACA (UV excision repair protein RAD23 n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GWS2_ACACA)

HSP 1 Score: 117 bits (294), Expect = 1.020e-25
Identity = 156/420 (37.14%), Postives = 214/420 (50.95%), Query Frame = 0
Query:    7 VKTLKGESFRIDVPEESLMSDVKTKISEVRGDEPSSQVLICGGKTLKDNDPLAT-TVTAGGFLVLMVKKVCNSSVSPAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPXXXXXXXXXXXXXXXXXXXXXXXXPAAMNDGMAIDPASVELLTAMGFPEDQARAALRAAFNDVSRAASYLMEGIPD---NVGAGAGVEGSAGLXXXXXXXXXXXXXXXXXXXXXXXXXXVGESELAEALMGMQGAGEGNPLNFMRFHPQFEQLRQLVRENPAVLPQVLQGLATQSPELIERINQHPDDFLRLMNEPPDAEGQAMMDLGAEGFIEEMEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQDGQVTVELTEEEGVAVESLMAMVPGVPRDRVIEAFIACDKNAEMAANLLFEN 422
            +KT++ + F ++VP+ + + DVK K+  +R +  + Q LI  GK L D+  + T  +    FLVLMV+K   ++V+ APA      XXXXX      XXXXXXXXXXXXXXXXX P                         +A+  G   + A V  +  MGFP ++   ALRA+FN+ +RA  YLM GIPD      A    E +A         XXXXXXXXXXXXXXXX      S L  ALMG QG G G    ++R HPQF Q++ +V+ NP +L  +LQ L   +P++++ I QH  +F+ L+NEP           GA G                                  XXXXX   G   +++T+EE  A++ L A+  G  R  VIEAF ACDK+ ++ AN LF++
Sbjct:    6 IKTIQQQQFEVEVPDTATVLDVKKKVEALRSENVAWQKLIFAGKILADDAKINTLNIKPTEFLVLMVRKPKEANVA-APAPAAQPAXXXXXAQPTQTXXXXXXXXXXXXXXXXXXPSSGGSIESEAA--------------SALVTGSDFE-AMVSNIMEMGFPREEVLRALRASFNNPNRAVEYLMTGIPDMPAQAPASPAAERAAAPAAGGEGAXXXXXXXXXXXXXXXXGGISLPSNLLGALMGQQG-GAGGHFEWLRQHPQFNQIKAMVQRNPQLLGPLLQQLGQLNPQILQMIGQHQAEFMALLNEPIQG--------GAGG--------------------------------APXXXXXAPPGSNYIQVTQEEKEAIDRLQAL--GFERHVVIEAFFACDKDEQVTANYLFDH 366          
BLAST of mRNA_P-littoralis_Contig113.111.1 vs. uniprot
Match: A0A7S3UA55_9CHLO (Ubiquitin receptor RAD23 n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3UA55_9CHLO)

HSP 1 Score: 117 bits (293), Expect = 1.520e-25
Identity = 148/437 (33.87%), Postives = 203/437 (46.45%), Query Frame = 0
Query:    5 LLVKTLKGESFRIDVPEESLMSDVKTKISEVRGDE--PSSQVLICGGKTLKDNDPLATT-VTAGGFLVLMVKKVCNSSVSPAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPXXXXXXXXXXXXXXXXXXXXXXXXPAAMND---GMAIDPASVELLTAMGFPEDQARAALRAAFNDVSRAASYLMEGIP-------DNVGAGAGVEGSAGLXXXXXXXXXXXXXXXXXXXXXXXXXXVGESELAEALMGMQGAGEGNPLNFMRFHPQFEQLRQLVRENPAVLPQVLQGLATQSPELIERINQHPDDFLRLMNEP-PDAEG-----QAMMDLGAEGFIEEMEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQDGQVTVELTEEEGVAVESLMAMVPGVPRDRVIEAFIACDKNAEMAANLLFEN 422
            L +KT+ G+ F+++   E  ++ +K K+ +V+GD      QVLI  GK LKD+  LA   VT  GFLV+M  K   ++  PAP   XXXXXXXXXXXXXXX                X  XXXXXXXXXXXXX            +A +    G  ++ A+V+ +  MGFPEDQ + A+RAAFN+  RA  YLM GIP        N    +  EG A                             G+           GA     L+F+R + QF+ LR +V+ NP +L  +LQ L  Q+P L++ IN +  +FL+L+NEP P+        + +M  GAEG                                          G   +++T EE  A++ L AM  G  R  VI+AF ACDK+  +AAN L E+
Sbjct:   17 LTLKTVAGKQFQVEAEAEEKVAQIKQKVQDVQGDALPKERQVLIFQGKILKDDTTLADNGVTENGFLVVMANKAKTTASQPAPEATXXXXXXXXXXXXXXXTSGGQQVAEEEPKAPKXXXXXXXXXXXXXXXXAPTSAPAEGDYTSAASHLVTGTELE-ATVKNIVEMGFPEDQVKQAMRAAFNNPDRAVEYLMTGIPATETAAVSNPQPRSATEGGA------------PEGGAPTAQPFDMFQQGGQXXXXXXXXXXXGA-----LDFLRDNQQFQALRTMVQANPQILQPMLQELGKQNPRLLDLINSNQQEFLQLLNEPLPEGASAEQLMEGLMGEGAEG---------------------------------------EGHGATEIQITPEENEAIQRLEAM--GFDRALVIQAFFACDKDEALAANFLLEH 394          
BLAST of mRNA_P-littoralis_Contig113.111.1 vs. uniprot
Match: A0A3M6VGI6_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VGI6_9STRA)

HSP 1 Score: 117 bits (294), Expect = 2.330e-25
Identity = 179/475 (37.68%), Postives = 224/475 (47.16%), Query Frame = 0
Query:    5 LLVKTLKGESFRIDVPEESLMSDVKTKISEVRGDEPSSQVLICGGKTLKDNDPLAT-TVTAGGFLVLMVKKVCNSSVSPAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPXXXXXXXXXXXXXXXXXXXXXXXXPAAMN----DGMAIDPA-----SVELLTAMGFPEDQARAALRAAFNDVSRAASYLMEGIPDNVGAGAGVEGSAGLXXXXXXXXXXXXXXXXXXXXXXXXXXVGESELAEALMGMQGAGEG--NPLNFMRFHPQFEQLRQLVRENPAVLPQVLQGLATQSPELIERINQHPDDFLRLMNEP---------PDAEGQAMMDLG----------------AEGFIEEMEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQDGQVTVE--------------------LTEEEGVAVESLMAMVPGVPRDRVIEAFIACDKNAEMAANLLFEN 422
            L +KTL+G +F +D      +  VK KI E++    + Q LI  GK LKD+  LA   V    FLV+MV K       P  AXXXXXXXXXXXXXXXXXXXXXXXXXXX        P     XXXXXXXX XXXXXXXXXX  A+N    DG  +  A     +V+ L  MGFPEDQ R+ALRAAFN+  RA  YLM GIPD V A   ++ +A L                                A A+ G+ G G+   N L  +R HPQF+ LRQLV+ NPA LP VLQ +  QSPEL+  I+Q+ D F++++NEP           + G A  DLG                 +    E +                                    G   +E                    L+EEE  AV+ L  M  G  R  VI+A++ACDKN  +AAN L ++
Sbjct:    3 LTIKTLQGVAFSLDAELTDAVLAVKQKIEEMQQFPVTQQKLIHAGKVLKDDSTLAEYNVKENDFLVVMVTK-------PKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXVTPIAALAPNTSSAXXXXXXXXPXXXXXXXXXXXTAVNSSTGDGSNVMSAEQMGATVQQLVDMGFPEDQVRSALRAAFNNPERAVEYLMTGIPDQVAAP--LQTAATLAG------------------------------AGAVAGIGGGGDETTNTLEALRNHPQFDALRQLVQSNPAALPAVLQQIGAQSPELLRLIHQNQDRFVQMLNEPIGTRETGSASSSAGAAPFDLGMGXXXGMPTPQQIQQLVDSLTPEQQTQMAAQMGMSPEQLRGLSQMLSNLPPGAMEQMMTSMGGGGLEGLGGXXXXXXXXXXXGHRIMLSEEEAAAVDRLCEM--GFERTDVIQAYLACDKNEALAANFLMDS 436          
BLAST of mRNA_P-littoralis_Contig113.111.1 vs. uniprot
Match: A0A5D6YB40_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YB40_9STRA)

HSP 1 Score: 117 bits (293), Expect = 2.360e-25
Identity = 178/457 (38.95%), Postives = 220/457 (48.14%), Query Frame = 0
Query:    5 LLVKTLKGESFRIDVPEESLMSDVKTKISEVRGDEPSSQVLICGGKTLKDNDPLAT-TVTAGGFLVLMVKKVCNSSVSPAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPXXXXXXXXXXXXXXXXXXXXXXXXPAAMNDGMAIDPASVELLTAMGFPEDQARAALRAAFNDVSRAASYLMEGIPDNVGAGAGVEGSAGLXXXXXXXXXXXXXXXXXXXXXXXXXXVGESELAEALMGMQGAGEGNPLNFMRFHPQFEQLRQLVRENPAVLPQVLQGLATQSPELIERINQHPDDFLRLMNEP--------PDAEGQAMMDLGAEG-------------FIEEMEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ-----------------DGQVTVELTEEEGVAVESLMAMVPGVPRDRVIEAFIACDKNAEMAANLLFEN 422
            L VKTL+G +F ID      ++ VK  I   +    + Q LI  GK LKD  PLA   V    FLV+MV K      +P P+XXXXXXXXXXXXXXXX   XXXXXXXXXXXXXXX  XXXXXXXXXXXXXXXXXXXXXXX    + D      A+V+ L  MGFPEDQ R AL+AAFN+  RA  YLM GIP+ V   A                                        A A   + G G  N L  +R HPQF+ LRQL++ NPA LP VLQ +  QSPEL+  I+Q+ D F+ ++NEP        P A G A +D G  G              ++ +                                   Q                  G   + LTEEE  A++ L  M  G  R+  ++A++ACDKN  +AAN L ++
Sbjct:    3 LTVKTLQGVAFSIDAEPTDTVASVKATIETQQSFPVAQQKLIHAGKVLKDESPLAEYNVKENDFLVVMVTK----PKAPKPSXXXXXXXXXXXXXXXXTPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGIVADEQMN--ATVQQLCEMGFPEDQVRQALQAAFNNPDRAVEYLMNGIPETVAPPA----------------------------------------ATAAAPLAG-GAANSLEALRNHPQFDALRQLIQANPAALPAVLQQIGGQSPELLRLIHQNQDQFVAMLNEPITTPSSSVPAATGAAPLDFGGLGGGGAMPTPQQIQQLVDSLTPEQQAQMAAQMGMTPDQLRGLSQMLSNLPPGAMEQMMASMGGDGAGXXXXXXXGGHRIMLTEEEAAAIDRLCDM--GFDRNEAVQAYLACDKNEALAANFLMDS 410          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig113.111.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KET6_9PHAE4.080e-11978.22UV excision repair protein RAD23 n=2 Tax=Ectocarpu... [more]
A0A836CLA0_9STRA2.110e-3837.08UV excision repair protein RAD23 n=1 Tax=Tribonema... [more]
A0A1Y1XXG2_9FUNG8.740e-2837.59UV excision repair protein RAD23 n=1 Tax=Basidiobo... [more]
A0A225X0I0_9STRA7.440e-2740.64UV excision repair protein RAD23 n=13 Tax=Phytopht... [more]
A0A0C3DUV6_9PEZI2.710e-2633.73UV excision repair protein RAD23 n=1 Tax=Oidiodend... [more]
A0A6G0WDE9_9STRA9.260e-2637.03UV excision repair protein RAD23 n=1 Tax=Aphanomyc... [more]
L8GWS2_ACACA1.020e-2537.14UV excision repair protein RAD23 n=1 Tax=Acanthamo... [more]
A0A7S3UA55_9CHLO1.520e-2533.87Ubiquitin receptor RAD23 n=1 Tax=Picocystis salina... [more]
A0A3M6VGI6_9STRA2.330e-2537.68Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
A0A5D6YB40_9STRA2.360e-2538.95Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004806UV excision repair protein Rad23PRINTSPR01839RAD23PROTEINcoord: 376..392
score: 37.97
coord: 395..409
score: 49.39
coord: 410..424
score: 42.9
coord: 285..307
score: 35.97
IPR004806UV excision repair protein Rad23TIGRFAMTIGR00601TIGR00601coord: 5..423
e-value: 1.7E-66
score: 222.9
IPR000626Ubiquitin-like domainSMARTSM00213ubq_7coord: 3..73
e-value: 9.1E-11
score: 51.8
IPR000626Ubiquitin-like domainPFAMPF00240ubiquitincoord: 5..74
e-value: 1.3E-10
score: 40.9
IPR000626Ubiquitin-like domainPROSITEPS50053UBIQUITIN_2coord: 3..78
score: 13.227765
IPR006636Heat shock chaperonin-bindingSMARTSM00727CBMcoord: 257..300
e-value: 1.8E-4
score: 30.8
IPR015940Ubiquitin-associated domainSMARTSM00165uba_6coord: 382..421
e-value: 2.7E-5
score: 33.6
coord: 156..193
e-value: 5.4E-10
score: 49.2
IPR015940Ubiquitin-associated domainPFAMPF00627UBAcoord: 155..191
e-value: 1.7E-11
score: 43.7
coord: 385..419
e-value: 1.9E-6
score: 27.6
IPR015940Ubiquitin-associated domainPROSITEPS50030UBAcoord: 154..194
score: 13.558972
IPR015940Ubiquitin-associated domainPROSITEPS50030UBAcoord: 377..422
score: 9.944407
NoneNo IPR availableGENE3D1.10.8.10coord: 372..424
e-value: 3.0E-17
score: 64.3
NoneNo IPR availableGENE3D3.10.20.90coord: 4..74
e-value: 1.6E-12
score: 49.0
NoneNo IPR availableGENE3D1.10.8.10coord: 157..196
e-value: 6.5E-14
score: 53.5
NoneNo IPR availablePANTHERPTHR10621:SF0AT15685P-RELATEDcoord: 5..422
NoneNo IPR availablePANTHERPTHR10621UV EXCISION REPAIR PROTEIN RAD23coord: 5..422
NoneNo IPR availableCDDcd14291UBA1_NUB1_likecoord: 156..191
e-value: 5.61017E-10
score: 52.451
NoneNo IPR availableCDDcd01805Ubl_Rad23coord: 4..72
e-value: 1.28902E-15
score: 69.123
NoneNo IPR availableCDDcd14281UBA2_Rad23_likecoord: 381..420
e-value: 5.4389E-11
score: 55.2099
IPR036353XPC-binding domain superfamilyGENE3D1.10.10.540coord: 250..315
e-value: 2.3E-21
score: 77.2
IPR036353XPC-binding domain superfamilySUPERFAMILY101238XPC-binding domaincoord: 255..321
IPR015360XPC-binding domainPFAMPF09280XPC-bindingcoord: 259..314
e-value: 1.3E-20
score: 72.8
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 4..85
IPR009060UBA-like superfamilySUPERFAMILY46934UBA-likecoord: 145..197
IPR009060UBA-like superfamilySUPERFAMILY46934UBA-likecoord: 365..422

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig113contigP-littoralis_Contig113:486605..503757 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig113.111.1mRNA_P-littoralis_Contig113.111.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig113 486541..504984 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig113.111.1 ID=prot_P-littoralis_Contig113.111.1|Name=mRNA_P-littoralis_Contig113.111.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=425bp
MSRSLLVKTLKGESFRIDVPEESLMSDVKTKISEVRGDEPSSQVLICGGK
TLKDNDPLATTVTAGGFLVLMVKKVCNSSVSPAPAPAAAAVAPAVAAASA
AAAAAAAAAPAAAAAASADPPAATPAAPAVAAPAAAPAAGGAAGGPAAMN
DGMAIDPASVELLTAMGFPEDQARAALRAAFNDVSRAASYLMEGIPDNVG
AGAGVEGSAGLGGFEGGDAALAAAMGAEGAEGGAGGGVGESELAEALMGM
QGAGEGNPLNFMRFHPQFEQLRQLVRENPAVLPQVLQGLATQSPELIERI
NQHPDDFLRLMNEPPDAEGQAMMDLGAEGFIEEMEDDDEEHDDEAAAAVA
AETATVAAGGGVAAAGGGGQDGQVTVELTEEEGVAVESLMAMVPGVPRDR
VIEAFIACDKNAEMAANLLFENAL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004806Rad23
IPR000626Ubiquitin-like_dom
IPR006636STI1_HS-bd
IPR015940UBA
IPR036353XPC-bd_sf
IPR015360XPC-bd
IPR029071Ubiquitin-like_domsf
IPR009060UBA-like_sf